Cuiting0906's picture
add data source and chromatin distribution
ff8604d verified
metadata
dataset_info:
  features:
    - name: chr
      dtype: string
    - name: start
      dtype: int64
    - name: end
      dtype: int64
    - name: TargetGene
      dtype: string
    - name: activity
      dtype: float64
    - name: hic_contact
      dtype: float64
    - name: ABC_Score
      dtype: float64
    - name: TargetGeneTSS
      dtype: int64
    - name: cre_center
      dtype: int64
    - name: cre_seq_500bp
      dtype: string
    - name: tss_start_1kb
      dtype: int64
    - name: tss_end_1kb
      dtype: int64
    - name: tss_seq_2kb
      dtype: string
    - name: cre_tss_distance
      dtype: int64
    - name: CellType
      dtype: string
  splits:
    - name: train
      num_examples: 8405058
      num_bytes: 21972232262
  download_size: 21972232262
  dataset_size: 21972232262
configs:
  - config_name: default
    data_files:
      - split: train
        path: data/train-*.arrow
data_source: https://osf.io/uhnb4/overview

###chromatin distribution chr1 count= 1071396 proportion=0.127470 chr10 count= 263063 proportion=0.031298 chr11 count= 605007 proportion=0.071981 chr12 count= 483592 proportion=0.057536 chr13 count= 64574 proportion=0.007683 chr14 count= 189139 proportion=0.022503 chr15 count= 232421 proportion=0.027653 chr16 count= 383804 proportion=0.045663 chr17 count= 670394 proportion=0.079761 chr18 count= 59938 proportion=0.007131 chr19 count= 1062631 proportion=0.126428 chr2 count= 402469 proportion=0.047884 chr20 count= 209652 proportion=0.024944 chr21 count= 73090 proportion=0.008696 chr22 count= 261987 proportion=0.031170 chr3 count= 401699 proportion=0.047793 chr4 count= 156557 proportion=0.018627 chr5 count= 260503 proportion=0.030994 chr6 count= 518629 proportion=0.061704 chr7 count= 366083 proportion=0.043555 chr8 count= 190901 proportion=0.022713 chr9 count= 347870 proportion=0.041388 chrX count= 129659 proportion=0.015426

Total: 8405058