Cuiting0906's picture
add data source and chromatin distribution
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---
dataset_info:
features:
- name: chr
dtype: string
- name: start
dtype: int64
- name: end
dtype: int64
- name: TargetGene
dtype: string
- name: activity
dtype: float64
- name: hic_contact
dtype: float64
- name: ABC_Score
dtype: float64
- name: TargetGeneTSS
dtype: int64
- name: cre_center
dtype: int64
- name: cre_seq_500bp
dtype: string
- name: tss_start_1kb
dtype: int64
- name: tss_end_1kb
dtype: int64
- name: tss_seq_2kb
dtype: string
- name: cre_tss_distance
dtype: int64
- name: CellType
dtype: string
splits:
- name: train
num_examples: 8405058
num_bytes: 21972232262
download_size: 21972232262
dataset_size: 21972232262
configs:
- config_name: default
data_files:
- split: train
path: data/train-*.arrow
data_source: https://osf.io/uhnb4/overview
---
###chromatin distribution
chr1 count= 1071396 proportion=0.127470
chr10 count= 263063 proportion=0.031298
chr11 count= 605007 proportion=0.071981
chr12 count= 483592 proportion=0.057536
chr13 count= 64574 proportion=0.007683
chr14 count= 189139 proportion=0.022503
chr15 count= 232421 proportion=0.027653
chr16 count= 383804 proportion=0.045663
chr17 count= 670394 proportion=0.079761
chr18 count= 59938 proportion=0.007131
chr19 count= 1062631 proportion=0.126428
chr2 count= 402469 proportion=0.047884
chr20 count= 209652 proportion=0.024944
chr21 count= 73090 proportion=0.008696
chr22 count= 261987 proportion=0.031170
chr3 count= 401699 proportion=0.047793
chr4 count= 156557 proportion=0.018627
chr5 count= 260503 proportion=0.030994
chr6 count= 518629 proportion=0.061704
chr7 count= 366083 proportion=0.043555
chr8 count= 190901 proportion=0.022713
chr9 count= 347870 proportion=0.041388
chrX count= 129659 proportion=0.015426
Total: 8405058