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10.1111_sapm.12544.pdf | D A T A AVA I L A B I L I T Y S T A T E M E N T
Data sharing not applicable to this article as no datasets were generated or analyzed during the
current study. | null | Received: 15 June 2022
Revised: 31 October 2022
Accepted: 2 November 2022
DOI: 10.1111/sapm.12544
O R I G I N A L A R T I C L E
Sobolev-orthogonal systems with tridiagonal
skew-Hermitian differentiation matrices
Arieh Iserles1
Marcus Webb2
1Department of Applied Mathematics and
Theoretical Physics, University o... | null |
10.1073_pnas.2221809120.pdf | Data, Materials, and Software Availability. All study data are included in the
article and/or SI Appendix. Sequencing data are available through the National
Center for Biotechnology Information Gene Expression Omnibus, accession num-
ber GSE234805 ( | null | RESEARCH ARTICLE | MEDICAL SCIENCES
OPEN ACCESS
Proxalutamide reduces SARS- CoV- 2 infection and associated
inflammatory response
Yuanyuan Qiaoa,b,c,1
Abhijit Paroliaa, Tongchen Hea, Caleb Chenga, Xuhong Caoa, Rui Wanga
Qianxiang Zhoug, Liandong Mag, Jonathan Z. Sextond,e,h,i,j, and Arul M. Chinnaiyana,b,c,k,l,2
, C... | null |
10.3390_bs13010066.pdf | Data Availability Statement: Data supporting the reported results is kept by the first author. | Data Availability Statement: Data supporting the reported results is kept by the first author. Acknowledgments: We would like to thank the visionary, courageous, resourceful research participants, all of whom are engaged in initiatives to transform the lives of individuals and communities. They are the inspiration behi... | Article
The Experience of Self-Transcendence in Social Activists
Carol Barton 1
and Rona Hart 2,*
1
2
Previously School of Psychology, University of East London, Water Lane, London E15 4LZ, UK
School of Psychology, University of Sussex, Falmer, Brighton BN1 9RH, UK
* Correspondence: rona.hart@sussex.ac.uk
Abstra... | null |
10.1371_journal.pone.0265477.pdf | Data Availability Statement: The raw data was
collected from Taiwan Centers for Disease Control
(CDC) and it is available at www.cdc.gov.tw/En.
The tool and dataset are publicly available at github.
com/mahsaashouri/Taiwan-COVID-19-Interactive-
tool. | The raw data was collected from Taiwan Centers for Disease Control (CDC) and it is available at www.cdc.gov.tw/En . The tool and dataset are publicly available at github. com/mahsaashouri/Taiwan | RESEARCH ARTICLE
Interactive tool for clustering and forecasting
patterns of Taiwan COVID-19 spread
Mahsa Ashouri, Frederick Kin Hing PhoaID*
Institute of Statistical Science, Academia Sinica, Taipei, Taiwan
* fredphoa@stat.sinica.edu.tw
Abstract
The COVID-19 data analysis is essential for policymakers to analyze... | null |
10.2196_41005.pdf | Data Availability
The deidentified data analyzed in this study are available from the corresponding author upon reasonable request. | Data Availability The deidentified data analyzed in this study are available from the corresponding author upon reasonable request. | JOURNAL OF MEDICAL INTERNET RESEARCH
Ghosh et al
Original Paper
An Unguided, Computerized Cognitive Behavioral Therapy
Intervention (TreadWill) in a Lower Middle-Income Country:
Pragmatic Randomized Controlled Trial
Arka Ghosh1, PhD; Rithwik J Cherian1,2, MSc; Surbhit Wagle1,3, MTech; Parth Sharma4, MTe... | null |
10.3389/fnbeh.2020.584731 | DATA AVAILABILITY STATEMENT
The raw data supporting the conclusions of this article will be
made available by the authors, without undue reservation. | DATA AVAILABILITY STATEMENT The raw data supporting the conclusions of this article will be made available by the authors, without undue reservation. | fnbeh-14-584731
November 10, 2020
Time: 15:58
# 1
ORIGINAL RESEARCH
published: 16 November 2020
doi: 10.3389/fnbeh.2020.584731
Developmental Fluoxetine Exposure
Alters Behavior and Neuropeptide
Receptors in the Prairie Vole
Rebecca H. Lawrence1,2, Michelle C. Palumbo2,3, Sara M. Freeman1,2,4,
Caleigh D. Guoynes1,... | null |
10.1073_pnas.2301852120.pdf | Data, Materials, and Software Availability. Cryo-EM images data have
been deposited in Electron Microscopy Public Image Archive (EMPIAR) data-
base with accession number EMPIAR-11544 (https://www.ebi.ac.uk/empiar/
EMPIAR-11544/) (41). | null | INAUGURAL ARTICLE |
BIOPHYSICS AND COMPUTATIONAL BIOLOGY
OPEN ACCESS
Quantification of gallium cryo-FIB milling damage in biological
lamellae
Bronwyn A. Lucasa,1,2,3
and Nikolaus Grigorieff a,b,1
This contribution is part of the special series of Inaugural Articles by members of the National Academy of Sciences e... | null |
10.7554_elife.76554.pdf | Data availability
Sequencing data have been deposited in GEO under accession code GSE157681.
The following dataset was generated:
Author(s)
Brown JM, Helsley R,
Kadam A, Neumann
C
Year
2021
Dataset title
Dataset URL
Database and Identifier
The Gut Microbe- Derived
Metabolite Trimethylamine
is a Biomarker of an... | Data availability Sequencing data have been deposited in GEO under accession code GSE157681. The following dataset was generated: | University of Kentucky
University of Kentucky
UKnowledge
UKnowledge
Pediatrics Faculty Publications
Pediatrics
1-27-2022
Gut Microbial Trimethylamine Is Elevated in Alcohol-Associated
Gut Microbial Trimethylamine Is Elevated in Alcohol-Associated
Hepatitis and Contributes to Ethanol-Induced Liver Injury in Mice
He... | null |
10.1088_1758-5090_acfb3c.pdf | Data availability statement
The data that support the findings of this study
are openly available at the following URL/DOI:
www.ncbi.nlm.nih.gov/bioproject/PRJNA953644.
The other data that supports the findings of this study
are available upon reasonable request. | Data availability statement The data that support the findings of this study are openly available at the following URL/DOI: www.ncbi.nlm.nih.gov/bioproject/PRJNA953644 . The other data that supports the findings of this study are available upon reasonable request. | Biofabrication 15 (2023) 045025
https://doi.org/10.1088/1758-5090/acfb3c
Biofabrication
PAPER
RECEIVED
18 April 2023
REVISED
21 August 2023
ACCEPTED FOR PUBLICATION
19 September 2023
PUBLISHED
27 September 2023
3D bioprinted endothelial cell-microglia coculture for diabetic
retinopathy modeling
Haixiang Wu1,∗,... | null |
10.1371_journal.pclm.0000285.pdf | null | R code and aggregated data used in climate risk calculations are available at https://github.com/groundfish- climatechange/fish-footprints . Confidential data may be acquired | RESEARCH ARTICLE
Stay or go? Geographic variation in risks due
to climate change for fishing fleets that adapt
in-place or adapt on-the-move
Jameal F. SamhouriID
Kate RichersonID
7, Lyall BellquistID
H. BeaudreauID
Abigail Harley11, Chris J. HarveyID
Amanda Phillips1,5, Leif K. RasmusonID
L. SeldenID
14
1*, Blake E... | Could not heal snippet |
10.1371_journal.pone.0256592.pdf | Data Availability Statement: The data underlying
the results presented in this study are from the
Centers for Medicare and Medicaid Services and
CMS does not permit data sharing as per their
legally binding and standard data use agreements.
The exact data used in this study can be purchased
directly from the Centers fo... | The data underlying the results presented in this study are from the Centers for Medicare and Medicaid Services and CMS does not permit data sharing as per their legally binding and standard data use agreements. The exact data used in this study can be purchased directly from the Centers for Medicare and Medicaid Servi... | RESEARCH ARTICLE
A comparison of prediction approaches for
identifying prodromal Parkinson disease
Mark N. WardenID
Brad A. RacetteID
1, Susan Searles Nielsen1, Alejandra Camacho-Soto1, Roman Garnett2,
1,3*
1 Department of Neurology, Washington University School of Medicine, Saint Louis, Missouri, United States
of ... | null |
10.1038/s41467-022-34431-1 | Data availability
The data that support this study are available from the corresponding
author upon reasonable request. The crystal structure described in this
study has been deposited in the Protein Data Bank under the accession
number 7TD5. The LC-MS/MS data files have been deposited to the Pro-
teomeXchange Consortiu... | Data availability The data that support this study are available from the corresponding author upon reasonable request. The crystal structure described in this study has been deposited in the Protein Data Bank under the accession number 7TD5. The LC-MS/MS data files have been deposited to the Pro-teomeXchange Consortiu... | Article
https://doi.org/10.1038/s41467-022-34431-1
CK2-mediated phosphorylation of SUZ12
promotes PRC2 function by stabilizing
enzyme active site
Received: 4 February 2022
Accepted: 25 October 2022
Lihu Gong 1,4, Xiuli Liu1,4, Lianying Jiao1,3,4, Xin Yang1, Andrew Lemoff
Xin Liu 1
2 &
Check for updates
;
,
:
)
... | null |
10.1088_1361-6463_ad0ac1.pdf | Data availability statement
All data that support the findings of this study are included
within the article (and any supplementary files). | Data availability statement All data that support the findings of this study are included within the article (and any supplementary files). | J. Phys. D: Appl. Phys. 57 (2024) 075101 (7pp)
Journal of Physics D: Applied Physics
https://doi.org/10.1088/1361-6463/ad0ac1
Enhanced performance of AlGaN-based
deep-UV LED by incorporating carrier
injection balanced modulation
layer synergistically with
polarization-regulating structures
Xun Hu1,2,3, Lijing Kong1... | null |
10.1186_s12866-020-01881-w.pdf | Availability of data and materials
All data generated or analyzed during this study are included in this
published article [and its supplementary information files]. | Availability of data and materials All data generated or analyzed during this study are included in this published article [and its supplementary information files]. | Negrete-González et al. BMC Microbiology (2020) 20:213
https://doi.org/10.1186/s12866-020-01881-w
R E S E A R C H A R T I C L E
Open Access
High prevalence of t895 and t9364 spa
types of methicillin-resistant Staphylococcus
aureus in a tertiary-care hospital in Mexico:
different lineages of clonal complex 5... | null |
10.1021/jacs.3c00612 | null | null | pubs.acs.org/JACS
Article
Experimental Tests of the Virtual Circular Genome Model for
Nonenzymatic RNA Replication
Dian Ding, Lijun Zhou, Shriyaa Mittal, and Jack W. Szostak*
Cite This: J. Am. Chem. Soc. 2023, 145, 7504−7515
Read Online
ACCESS
Metrics & More
Article Recommendations
*sı Supporting Information
A... | null |
10.1016_j.isci.2022.104876.pdf | Data and code availability
d Microscopy images published in this paper will be shared by the lead contact upon request.
d Original code is uploaded in the supplementary documents and is publicly available as of the date of
publication.
Section 1: Data
All data reported in this paper will be shared by the lead conta... | Materials availability This study did not generate new unique reagents. Data and code availability d Microscopy images published in this paper will be shared by the lead contact upon request. d Original code is uploaded in the supplementary documents and is publicly available as of the date of publication. | iScience
ll
OPEN ACCESS
Article
Scale space detector for analyzing spatiotemporal
ventricular contractility and nuclear
morphogenesis in zebrafish
Tanveer Teranikar,
Cameron
Villarreal, Nabid
Salehin, ..., Hung
Cao, Cheng–Jen
Chuong, Juhyun
Lee
juhyun.lee@uta.edu
Highlights
Cardiac defect genes in
humans have
corr... | null |
10.1088_1361-6641_acfa1f.pdf | Data availability statement
All data that support the findings of this study are included
within the article (and any supplementary files). | Data availability statement All data that support the findings of this study are included within the article (and any supplementary files). | Semicond. Sci. Technol. 38 (2023) 115004 (6pp)
Semiconductor Science and Technology
https://doi.org/10.1088/1361-6641/acfa1f
MISHEMT intrinsic voltage gain under
multiple channel output characteristics
Bruno Godoy Canales1,∗, Welder Fernandes Perina1, Joao Antonio Martino1,
Eddy Simoen2, Uthayasankaran Peralagu... | null |
10.1371_journal.pone.0232007.pdf | Data Availability Statement: All relevant data are
within the manuscript and its Supporting
Information files. | All relevant data are within the manuscript and its Supporting Information files. | RESEARCH ARTICLE
Common mental disorders prevalence in
adolescents: A systematic review and meta-
analyses
Sara Arau´ jo SilvaID
Santos Gonc¸ alves1, Eliane Said Dutra1, Kênia Mara Baiocchi Carvalho1,2
1*, Simoni Urbano Silva2, De´ bora Barbosa Ronca1, Vivian Siqueira
1 Graduate Program in Human Nutrition, Universi... | null |
10.1007/s13187-021-02114-y | null | Data Availability Anonymized data will be made available upon request. | Journal of Cancer Education (2023) 38:292–300
https://doi.org/10.1007/s13187-021-02114-y
Using Protection Motivation Theory to Predict Intentions
for Breast Cancer Risk Management: Intervention Mechanisms
from a Randomized Controlled Trial
Claire C. Conley1 · Karen J. Wernli2 · Sarah Knerr3 · Tengfei Li4 · Kathleen L... | Could not heal snippet |
10.3389/fmicb.2019.03155 | DATA AVAILABILITY STATEMENT
The raw data supporting the conclusions of this article are made
available by the authors, without undue reservation, through
Zenodo (doi: 10.5281/zenodo.3582838). | DATA AVAILABILITY STATEMENT The raw data supporting the conclusions of this article are made available by the authors, without undue reservation, through Zenodo ( doi: 10.5281/zenodo.3582838 ). | fmicb-10-03155
January 13, 2020
Time: 16:53
# 1
ORIGINAL RESEARCH
published: 22 January 2020
doi: 10.3389/fmicb.2019.03155
Interacting Temperature, Nutrients
and Zooplankton Grazing Control
Phytoplankton Size-Abundance
Relationships in Eight Swiss Lakes
Francesco Pomati1,2*, Jonathan B. Shurin3, Ken H. Andersen4,... | null |
10.1128_mbio.01039-23.pdf | DATA AVAILABILITY
Crystallographic data have been deposited to the RCSB protein data bank (accessions
8FZY, 8FZZ, and 8G0K). Metagenomic sequencing data were previously published (32)
and are publicly available at the NCBI sequence read archive (BioProject PRJNA398089).
Plasmids and bacterial s... | DATA AVAILABILITY Crystallographic data have been deposited to the RCSB protein data bank (accessions 8FZY, 8FZZ, and 8G0K ). Metagenomic sequencing data were previously published (32) and are publicly available at the NCBI sequence read archive (BioProject PRJNA398089 ). Plasmids and bacterial strains generated in the... | | Bacteriology | Research Article
Structural disruption of Ntox15 nuclease effector domains by
immunity proteins protects against type VI secretion system
intoxication in Bacteroidales
Dustin E. Bosch,1 Romina Abbasian,1 Bishal Parajuli,1 S. Brook Peterson,2,3 Joseph D. Mougous2,3,4
AUTHOR AFFILIATIONS See affilia... | null |
10.1038_s41467-022-28771-1.pdf | Data availability
Data supporting the results of this study are presented within the article and
supplementary figures. NGS data are available in the NCBI Sequence Read Archive
database (BioProject accession code PRJNA803881). Additional details and data to
support the findings of this study are available from the corres... | Data availability Data supporting the results of this study are presented within the article and supplementary figures. NGS data are available in the NCBI Sequence Read Archive database (BioProject accession code PRJNA803881). Additional details and data to support the findings of this study are available from the corr... | ARTICLE
https://doi.org/10.1038/s41467-022-28771-1
OPEN
Harnessing DSB repair to promote efficient
homology-dependent and -independent prime
editing
Martin Peterka1✉
Burcu Bestas
Grzegorz Sienski
1, Jack Barr1, Stijn van de Plassche1, Patricia Mendoza-Garcia
1, Mike Firth3 & Marcello Maresca
, Nina Akrap1,4, Songy... | null |
10.1073_pnas.2301121120.pdf | Data, Materials, and Software Availability. Cryo-EM maps and atomic mod-
els for all structures described in this work have been deposited to the Electron
Microscopy Data Bank (EMDB) and the Protein Data Bank (PDB), respectively.
Accession codes are as follows: PLCβ3 in solution-8EMV and EMD-28266,
PLCβ3 in co... | null | RESEARCH ARTICLE |
BIOCHEMISTRY
OPEN ACCESS
Gβγ activates PIP2 hydrolysis by recruiting and orienting PLCβ on
the membrane surface
Maria E. Falzonea,b
and Roderick MacKinnona,b,1
Edited by James Hurley, University of California, Berkeley, CA; received January 19, 2023; accepted April 6, 2023
Phospholipase C-βs ... | null |
10.1103_physrevb.106.235128.pdf | null | null | PHYSICAL REVIEW B 106, 235128 (2022)
Thermal critical points from competing singlet formations in fully frustrated
bilayer antiferromagnets
Lukas Weber
,1,2,* Antoine Yves Dimitri Fache,3 Frédéric Mila ,3 and Stefan Wessel
4
1Center for Computational Quantum Physics, Flatiron Institute, 162 5th Avenue, New York, N... | null |
10.1371_journal.pntd.0009999.pdf | Data Availability Statement: All relevant data are
within the paper and its Supporting Information
files. | All relevant data are within the paper and its Supporting Information files. | RESEARCH ARTICLE
Multimodal biomarker discovery for active
Onchocerca volvulus infection
1*, Emmanuel Njumbe Ediage2, Dirk Van Roosbroeck2, Stijn Van Asten2,
Ole LagatieID
Ann Verheyen1, Linda Batsa Debrah3, Alex Debrah4, Maurice R. Odiere5, Ruben T’Kindt6,
Emmie DumontID
1
Filip Cuyckens2, Lieven J. StuyverID
6, K... | null |
10.1088_1361-6595_ad05f5.pdf | Data availability statement
The data cannot be made publicly available upon publication
because they are not available in a format that is sufficiently
accessible or reusable by other researchers. The data that sup-
port the findings of this study are available upon reasonable
request from the authors. | Data availability statement The data cannot be made publicly available upon publication because they are not available in a format that is sufficiently accessible or reusable by other researchers. The data that support the findings of this study are available upon reasonable request from the authors. | Plasma Sources Sci. Technol. 32 (2023) 115006 (10pp)
Plasma Sources Science and Technology
https://doi.org/10.1088/1361-6595/ad05f5
The breakdown characteristic of porous
dielectric discharge based on
percolation structure
Yuheng Hu, Libo Rao, Feiyu Wu, Kai Chen, Yilong Mao, Yue Chen,
Jialei Wang and Hao Wang
∗
... | null |
10.1038_s41598-020-79151-y.pdf | Data availability
The raw data of the study are available at http://www.natur e.com/srep. | Data availability The raw data of the study are available at http://www.natur e.com/srep . Received: 7 August 2020; Accepted: 1 December 2020 | OPEN
Longitudinal changes in superficial
microvasculature in glaucomatous
retinal nerve fiber layer defects
after disc hemorrhage
Yoko Okamoto, Tadamichi Akagi*, Kenji Suda, Takanori Kameda, Masahiro Miyake,
Hanako Ohashi Ikeda, Eri Nakano, Akihito Uji & Akitaka Tsujikawa
Glaucoma is a multifactorial optic neuropath... | null |
10.1038_s41467-022-30736-3.pdf | Data availability
The data used in this paper are available at the following url: https://figshare.com/
articles/dataset/Manuscript_Data/16695592. In addition, Source Data are provided with
this paper, which can be used to reproduce figures without rerunning analyses. Source
data are provided with this paper.
Code avail... | Data availability The data used in this paper are available at the following url: https://figshare.com/ articles/dataset/Manuscript_Data/16695592 . In addition, Source Data are provided with this paper, which can be used to reproduce figures without rerunning analyses. Source data are provided with this paper. Code ava... | ARTICLE
https://doi.org/10.1038/s41467-022-30736-3
OPEN
Stable choice coding in rat frontal orienting fields
across model-predicted changes of mind
1, Ahmed El Hady
1,2,4, Emily Jane Dennis
1,4, Alex T. Piet
1,5✉
&
J. Tyler Boyd-Meredith
1,3,5✉
Carlos D. Brody
;
,
:
)
(
0
9
8
7
6
5
4
3
2
1
During decision maki... | null |
10.1088_1751-8121_ad0b5c.pdf | Data availability statement
No new data were created or analysed in this study. | Data availability statement No new data were created or analysed in this study. | J. Phys. A: Math. Theor. 56 (2023) 495205 (37pp)
https://doi.org/10.1088/1751-8121/ad0b5c
Journal of Physics A: Mathematical and Theoretical
On Hamiltonian structures of
quasi-Painlevé equations
Galina Filipuk1 and Alexander Stokes2,∗
1 Institute of Mathematics, University of Warsaw, ul. Banacha 2, 02-097 Warsaw... | null |
10.3390_genes14061231.pdf | Data Availability Statement: Not applicable. | Data Availability Statement: Not applicable. Acknowledgments: The article publishing fees were funded by the University of Oradea. | Article
The Use of Xpert MTB/RIF Ultra Testing for Early Diagnosis
of Tuberculosis: A Retrospective Study from a
Single-Center Database
Cristian Sava 1,2
Cristian Phillip Marinău 1,2 and Andreea Bianca Balmos,
, Mihaela Sava 2, Ana-Maria Drăgan 1,2, Alin Iuhas 1,2,*
1,2
, Larisa Niulas,
1,2
,
1
Faculty of Medic... | null |
10.1088_1361-665x_ad1426.pdf | Data availability statement
All data that support the findings of this study are included
within the article (and any supplementary files). | Data availability statement All data that support the findings of this study are included within the article (and any supplementary files). | Smart Mater. Struct. 33 (2024) 015032 (11pp)
Smart Materials and Structures
https://doi.org/10.1088/1361-665X/ad1426
Research on variable stiffness
asymmetrical resonant linear
piezoelectric actuator based on
multi-modal drive
Liangguo He
and An Qian
∗, Xukang Yue, Haotian Dou, Xinfang Ge, Zhikai Wan
School of ... | null |
10.1038/s41467-022-35202-8 | Data availability
Data supporting the findings of this manuscript are available from the
corresponding author upon request. The source data underlying all
figures are available as a Source Data file provided with this
paper. Source data are provided with this paper.
Code availability
All codes used for data analysis may ... | Data availability Data supporting the findings of this manuscript are available from the corresponding author upon request. The source data underlying all figures are available as a Source Data file provided with this paper. Source data are provided with this paper. Code availability All codes used for data analysis ma... | Article
https://doi.org/10.1038/s41467-022-35202-8
Membrane-mediated protein interactions
drive membrane protein organization
Received: 6 July 2022
Accepted: 22 November 2022
Check for updates
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,
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0
9
8
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Yining Jiang 1,2, Batiste Thienpont3, Vinay Sapuru4,5, Ri... | null |
10.1371_journal.pgen.1011201.pdf | null | The consensus sequence of Spoink as well as the sequences of the six PCR amplicons are available at https://github. com/rpianezza/Dmel-Spoink/tree/main/ | RESEARCH ARTICLE
Spoink, a LTR retrotransposon, invaded D.
melanogaster populations in the 1990s
Riccardo PianezzaID
Robert KoflerID
1*
1,2☯, Almorò Scarpa1,2☯, Prakash Narayanan3, Sarah Signor3*,
1 Institut fu¨ r Populationsgenetik, Vetmeduni Vienna, Vienna, Austria, 2 Vienna Graduate School of Population
Genetic... | Could not heal snippet |
10.1371_journal.pone.0222013.pdf | Data Availability Statement: All relevant data are
within the paper and its Supporting Information
files. | All relevant data are within the paper and its Supporting Information files. | RESEARCH ARTICLE
MicroRNA regulation in colorectal cancer
tissue and serum
Lukasz Gmerek1,2☯, Kari Martyniak1☯, Karolina Horbacka2, Piotr Krokowicz2,
Wojciech Scierski3, Pawel Golusinski4,5, Wojciech Golusinski5, Augusto Schneider6*,
Michal M. MasternakID
1,5*
1 College of Medicine, Burnett School of Biomedical Sci... | null |
10.1007_s00208-022-02489-3.pdf | Data Availability Data sharing not applicable to this article as no data sets were generated or analysed
during the current study. | Data Availability Data sharing not applicable to this article as no data sets were generated or analysed during the current study. | Mathematische Annalen
https://doi.org/10.1007/s00208-022-02489-3
Mathematische Annalen
Time periodic motion of temperature driven compressible
fluids
Eduard Feireisl1
· Piotr Gwiazda2
· Agnieszka ´Swierczewska-Gwiazda3
Received: 11 April 2022 / Revised: 7 September 2022 / Accepted: 3 October 2022
© The Author(s) 2... | null |
10.1017_s0260210522000614.pdf | null | null | Review of International Studies (2023), 49: 4, 763–779
doi:10.1017/S0260210522000614
R E S E A R C H A R T I C L E
From savages to snowflakes: Race and the enemies of
free speech
Darcy Leigh*
Sussex Law School, School of Law, Politics and Sociology, Freeman Centre, University of Sussex, Brighton, United Kingdom
*Co... | null |
10.1158_1078-0432.ccr-21-3817.pdf | t.
The somatic variant calls and normalized RNA-seq intensity data,
code, and deidentified clinical data are available here: https://github.
com/kbolton-lab/Bolton_OCCC. This will enable all the figures and
tables to be re-generated and also provide data for others for future
analyses. We will also make the BAMs/FASTQs ... | Data availability The somatic variant calls and normalized RNA-seq intensity data, code, and deidentified clinical data are available here: https://github. com/kbolton-lab/Bolton_OCCC . This will enable all the figures and tables to be re-generated and also provide data for others for future analyses. We will also make... | Washington University School of Medicine
Washington University School of Medicine
Digital Commons@Becker
Digital Commons@Becker
2020-Current year OA Pubs
Open Access Publications
11-14-2022
Molecular subclasses of clear cell ovarian carcinoma and their
Molecular subclasses of clear cell ovarian carcinoma and their
... | null |
10.1371_journal.pdig.0000221.pdf | rnal.pdig.0000221 May 15, 2023
1 / 21
PLOS DIGITAL HEALTHprotocol approved by the Danish Data Protection
Agency. In the paper, we have also had to limit the
number of indirect identifiers in cases where there
might be a risk of compromising patient privacy
(e.g. Tables 1 and 2). Reviewers and others may
obtain acces... | null | RESEARCH ARTICLE
Using the app “Injurymap” to provide exercise
rehabilitation for people with acute lateral
ankle sprains seen at the Hospital Emergency
Department–A mixed-method pilot study
Jonas Bak1, Kristian Thorborg2,3,4, Mikkel Bek Clausen2,5, Finn Elkjær Johannsen6,7,
Jeanette Wassar Kirk1,8, Thomas BandholmID... | null |
10.1103_physrevd.107.063005.pdf | null | null | PHYSICAL REVIEW D 107, 063005 (2023)
Flavor changing interactions confronted with meson
mixing and hadron colliders
A. E. Cárcamo Hernández ,1,2,3,* L. Duarte ,4,†
A. S. de Jesus ,4,5,‡
S. Kovalenko,2,3,6,§ F. S. Queiroz,3,4,5,∥
C. Siqueira ,7,¶ Y. M. Oviedo-Torres ,8,** and Y. Villamizar
4,5,††
1Universidad T´e... | null |
10.1016_j.envres.2023.115368.pdf | Data availability
Data will be made available on request. | Data availability Data will be made available on request. | Contents lists available at ScienceDirect
Environmental Research
journal homepage: www.elsevier.com/locate/envres
Effects of pesticide exposure on oxidative stress and DNA methylation
urinary biomarkers in Czech adults and children from the
CELSPAC-SPECIMEn cohort
Tom´aˇs Janoˇs a, Ilse Ottenbros b,c, Lucie Bl´ahov... | null |
10.1371_journal.pone.0263447.pdf | Data Availability Statement: All relevant data are
within the manuscript and its Supporting
Information files. | All relevant data are within the manuscript and its Supporting Information files. | RESEARCH ARTICLE
Stakeholder perceptions of bird-window
collisions
Georgia J. RiggsID*, Omkar Joshi, Scott R. Loss
Department of Natural Resource Ecology and Management, Oklahoma State University, Stillwater,
Oklahoma, United States of America
* georgia.riggs@okstate.edu
Abstract
Bird-window collisions are a majo... | null |
10.1038_s41598-021-03032-1.pdf | Data availability
All data are available in the manuscript. | Data availability All data are available in the manuscript. Received: 24 May 2021; Accepted: 17 November 2021 | OPEN
In‑vitro propagation
and phytochemical profiling
of a highly medicinal and endemic
plant species of the Himalayan
region (Saussurea costus)
Ajmal Khan1, Azhar Hussain Shah2* & Niaz Ali1
Efficient protocols for callus induction and micro propagation of Saussurea costus (Falc.) Lipsch were
developed and phytochem... | null |
10.3201_eid2507.181794.pdf | null | null | RESEARCH
Asymptomatic Dengue Virus
Infections, Cambodia, 2012–2013
Sowath Ly,1 Camille Fortas,1 Veasna Duong, Tarik Benmarhnia, Anavaj Sakuntabhai, Richard Paul,
Rekol Huy, Sopheak Sorn, Kunthy Nguon, Siam Chan, Souv Kimsan, Sivuth Ong, Kim Srorn Kim,
Sowathy Buoy, Lim Voeung, Philippe Dussart, Philippe Buchy,1,2 Arn... | null |
10.1371_journal.pcbi.1008853.pdf | cation.
Data Availability Statement: BCI FDP data are
available from https://repository.si.edu/handle/
10088/11. The authors do not own the data and are
unable to share it in a public repository, as the
majority of the data is held by various government
agencies. However interested researchers are able
to access all t... | BCI FDP data are available from https://repository.si.edu/handle/ 10088/11 . The authors do not own the data and are unable to share it in a public repository, as the majority of the data is held by various government agencies. However interested researchers are able to access all the data through the Smithsonian Insti... | RESEARCH ARTICLE
Interactions between all pairs of neighboring
trees in 16 forests worldwide reveal details of
unique ecological processes in each forest,
and provide windows into their evolutionary
histories
4,5, Yi Jin6,
7, Jill ThompsonID
12, Sara GermainID
7, Heming Liu13, Joseph SmokeyID
1☯*, Bin Wang2☯, Shu... | null |
10.1088_1361-6463_ad146b.pdf | Data availability statement
All data that support the findings of this study are included
within the article (and any supplementary files). | Data availability statement All data that support the findings of this study are included within the article (and any supplementary files). | J. Phys. D: Appl. Phys. 57 (2024) 115204 (20pp)
Journal of Physics D: Applied Physics
https://doi.org/10.1088/1361-6463/ad146b
Liquid treatment with a plasma jet
surrounded by a gas shield: effect of the
treated substrate and gas shield
geometry on the plasma effluent
conditions
Pepijn Heirman1,∗, Ruben Verloy1,2... | null |
10.1371_journal.pgen.1010857.pdf | Data Availability Statement: Hi-C data were
deposited in the Gene Expression Omnibus
(accession no. GSE225771). The scripts used for
analyzing Hi-C data have been deposited to Github
(https://github.com/hbbrandao/Borrelia_HiC_
Analysis). All other relevant data are within the
paper and its Supporting Information files. | Hi-C data were deposited in the Gene Expression Omnibus (accession no. GSE225771). The scripts used for analyzing Hi-C data have been deposited to Github ( https://github.com/hbbrandao/Borrelia_HiC_ Analysis ). All other relevant data are within the paper and its Supporting Information files. | RESEARCH ARTICLE
Organization and replicon interactions within
the highly segmented genome of Borrelia
burgdorferi
Zhongqing RenID
WagnerID
2,3,4*, Xindan WangID
1*
1☯, Constantin N. TakacsID
2,3,4☯¤, Hugo B. BrandãoID
5, Christine Jacobs-
a1111111111
a1111111111
a1111111111
a1111111111
a1111111111
1 Departmen... | null |
10.1038_s41598-020-65766-8.pdf | Data availability
Data are available at http://bicresources.jcbose.ac.in/ssaha4/drag/browse.php. Supporting figures and tables are
included in Supplementary Files 1–3. | Data availability Data are available at http://bicresources.jcbose.ac.in/ssaha4/drag/browse.php . Supporting figures and tables are included in Supplementary Files 1-3. | open
Survey of drug resistance
associated gene mutations in
Mycobacterium tuberculosis,
eSKApe and other bacterial species
Abhirupa Ghosh1,2, Saran n.1,2 & Sudipto Saha1 ✉
tuberculosis treatment includes broad-spectrum antibiotics such as rifampicin, streptomycin
and fluoroquinolones, which are also used against oth... | null |
10.1007_s00127-023-02428-w.pdf | Data Availability The datasets generated during and/or analysed dur-
ing the current study are not publicly available under current ethical
approvals but are available from the corresponding author on reason-
able request. | Data Availability The datasets generated during and/or analysed during the current study are not publicly available under current ethical approvals but are available from the corresponding author on reasonable request. | Social Psychiatry and Psychiatric Epidemiology (2023) 58:569–579
https://doi.org/10.1007/s00127-023-02428-w
ORIGINAL PAPER
Five‑year illness trajectories across racial groups in the UK
following a first episode psychosis
Siân Lowri Griffiths1
Linda Everard2 · Peter B. Jones3 · David Fowler4 · Joanne Hodgekins5 · Tim... | null |
10.1088_1402-4896_ad0c11.pdf | Data availability statement
All data that support the findings of this study are included within the article (and any supplementary files). | Data availability statement All data that support the findings of this study are included within the article (and any supplementary files). ORCID iDs Yaseen Muhammad https://orcid.org/0000-0002-7042-1527 | Phys. Scr. 98 (2023) 125967
https://doi.org/10.1088/1402-4896/ad0c11
PAPER
RECEIVED
3 May 2023
REVISED
18 September 2023
ACCEPTED FOR PUBLICATION
13 November 2023
PUBLISHED
27 November 2023
Comparative investigation of low and high pelletize pressure for
(Ag)x/CuTl-1223 nanoparticles-superconductor composites
Y... | null |
10.1371_journal.pone.0248369.pdf | Data Availability Statement: All relevant data are
within the paper and its Supporting information
files. | All relevant data are within the paper and its Supporting information files. | RESEARCH ARTICLE
Climbing since the early Miocene: The fossil
record of Paullinieae (Sapindaceae)
Nathan A. JudID
G. Chery5*
1,3*, Sarah E. AllenID
2, Chris W. Nelson3¤, Carolina L. Bastos4, Joyce
1 Department of Biology, William Jewell College, Liberty, MO, United States of America, 2 Department of
Biology, Penn ... | null |
10.1371_journal.pone.0298960.pdf | Data Availability Statement: All relevant data are
within the manuscript and its Supporting
Information files. | All relevant data are within the manuscript and its Supporting Information files. | RESEARCH ARTICLE
Prevalence and associated factors of
refractive error among adults in South
Ethiopia, a community-based cross-sectional
study
Marshet Gete Abebe1☯, Abiy Maru Alemayehu2☯, Minychil Bantihun Munaw2☯, Mikias
Mered Tilahun2☯, Henok Biruk AlemayehuID
1☯*
1 Department of Ophthalmology and Optometry, Hawa... | null |
10.1016_j.cell.2023.05.028.pdf | lability—Plasmids generated in this study are available upon written request.
Data and Code availability
•
•
All raw and processed sequencing data in this study, including single-cell DNA
methylation sequencing, single-cell RNA-seq, ChIP-seq, Cut and Run assay
and Nanopore sequencing, have been deposited to the NCB... | • All raw and processed sequencing data in this study, including single-cell DNA methylation sequencing, single-cell RNA-seq, ChIP-seq, Cut and Run assay and Nanopore sequencing, have been deposited to the NCBI Gene Expression Omnibus (GEO) database under accession GSE208449. All data are publicly available as of the d... | A
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HHS Public Access
Author manuscript
Cell. Author manuscript; available in PMC 2023 August 18.
Published in final edited form as:
Cell. 2023 June 22; 186(13): 2765–2782.e28. doi:10.10... | null |
10.1016_j.enpol.2022.113277.pdf | Data availability
No data was used for the research described in the article. | Data availability No data was used for the research described in the article. | Community wealth building in an age of just transitions: exploring civil
Community wealth building in an age of just transitions: exploring civil
society approaches to net zero and future research synergies
society approaches to net zero and future research synergies
Max Lacey-Barnacle, Adrian Smith, Tim Foxon
Public... | null |
10.1371_journal.pgen.1008460.pdf | Data Availability Statement: The RNA sequencing
data of human cell lines and zebrafish tissues are
available from NCBI Sequence Read Archive (SRA)
(accession numbers PRJNA542249 and
PRJNA543385). All other relevant data are
available within the manuscript and its Supporting
Information files. | The RNA sequencing data of human cell lines and zebrafish tissues are available from NCBI Sequence Read Archive (SRA) (accession numbers PRJNA542249 and PRJNA543385). All other relevant data are available within the manuscript and its Supporting Information files. | RESEARCH ARTICLE
A missense mutation in SNRPE linked to non-
syndromal microcephaly interferes with U
snRNP assembly and pre-mRNA splicing
Tao Chen1☯, Bin ZhangID
Sebastian Fro¨ hler1, Clemens GrimmID
Min Zhang2, Nadine KraemerID
2,3☯, Thomas Ziegenhals4☯, Archana B. Prusty4☯,
4, Yuhui Hu2, Bernhard Schaefke2,5, Li... | null |
10.1371_journal.ppat.1009995.pdf | Data Availability Statement: All relevant data are
within the manuscript and its Supporting
Information files. | All relevant data are within the manuscript and its Supporting Information files. | RESEARCH ARTICLE
Acquisition of yersinia murine toxin enabled
Yersinia pestis to expand the range of
mammalian hosts that sustain flea-borne
plague
David M. BlandID*, Ade´ laïde MiarinjaraID
Joseph Hinnebusch
¤a, Christopher F. Bosio, Jeanette CalarcoID
¤b, B.
a1111111111
a1111111111
a1111111111
a1111111111
a11111... | null |
10.1038_s41467-023-39627-7.pdf | Data availability
The sequencing data generated in this study have been deposited in
the NCBI Gene Expression Omnibus (GEO) database under accession
code GSE192447. The publicly available whole blood bulk short-read
RNA-Seq data from healthy samples and samples infected with Makona
Ebola Virus data used in this study a... | Data availability The sequencing data generated in this study have been deposited in the NCBI Gene Expression Omnibus (GEO) database under accession code GSE192447 . The publicly available whole blood bulk short-read RNA-Seq data from healthy samples and samples infected with Makona Ebola Virus data used in this study ... | Article
https://doi.org/10.1038/s41467-023-39627-7
Single-cell profiling of lncRNA expression
during Ebola virus infection in rhesus
macaques
Received: 25 August 2022
Accepted: 19 June 2023
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10.15252_embj.2022112987.pdf | Data availability
Original high resolution Z stacks for all images used in figures have
been deposited in the BioImage Archive: accession number
S-BIAD651 (https://www.ebi.ac.uk/biostudies/BioImages/studies/
S-BIAD651?query=S-BIAD651). | Data information: ****P < 0.0001; ***P < 0.001; *P < 0.05; ns, not significant. For panel B significance was determined using a one-way ANOVA; for all other panels significance was determined using an unpaired t-test. All images in this figure are maximum intensity projections. Scale bars = 10 lm. Source data are avail... | Article
Nucleoporin foci are stress-sensitive condensates
dispensable for C. elegans nuclear pore assembly
, Basma Taleb Ismail1, Peter Askjaer2 & Geraldine Seydoux1,*
Laura Thomas1
Abstract
Nucleoporins (Nups) assemble nuclear pores that form the perme-
ability barrier between nucleoplasm and cytoplasm. Nucleoporin... | null |
10.2196_20920.pdf | null | null | JOURNAL OF MEDICAL INTERNET RESEARCH
Leis et al
Original Paper
Evaluating Behavioral and Linguistic Changes During Drug
Treatment for Depression Using Tweets in Spanish: Pairwise
Comparison Study
Angela Leis*, PsyM; Francesco Ronzano*, PhD; Miguel Angel Mayer, MD, MPH, PhD; Laura I Furlong, PhD; Ferran
Sanz, Prof D... | null |
10.1371_journal.pone.0287008.pdf | Data Availability Statement: The data underlying
the results presented in the study are available
from Table 1. | The data underlying the results presented in the study are available from Table 1 . | RESEARCH ARTICLE
Sex differences in hepatitis A incidence rates–
a multi-year pooled-analysis based on
national data from nine high-income
countries
Manfred S. GreenID*, Naama Schwartz, Victoria PeerID
School of Public Health, University of Haifa, Haifa, Israel
* manfred.s.green@gmail.com
a1111111111
a1111111111
a... | null |
10.1007_s10858-020-00303-3.pdf | null | null | Journal of Biomolecular NMR (2020) 74:183–191
https://doi.org/10.1007/s10858-020-00303-3
ARTICLE
Slow ring flips in aromatic cluster of GB1 studied by aromatic 13C
relaxation dispersion methods
Matthias Dreydoppel1 · Heiner N. Raum1 · Ulrich Weininger1
Received: 28 November 2019 / Accepted: 27 January 2020 / Publis... | null |
10.1038_s41598-021-00119-7.pdf | Data availability
The data presented in this study are available on request from the corresponding authors. | Data availability The data presented in this study are available on request from the corresponding authors. Received: 7 July 2021; Accepted: 6 October 2021 | OPEN
Elevated serum levels
of methylglyoxal are associated
with impaired liver function
in patients with liver cirrhosis
Maurice Michel1*, Cornelius Hess2, Leonard Kaps1, Wolfgang M. Kremer1, Max Hilscher1,
Peter R. Galle1, Markus Moehler1, Jörn M. Schattenberg1, Marcus‑Alexander Wörns1,
Christian Labenz1 & Michael N... | null |
10.1038_s41593-023-01409-1.pdf | null | Data availability All primary data for the figures and extended data figures are available from the corresponding author (K.D.) upon request. Code availability The code used for data processing and analysis is available from the corresponding author (K.D.) upon request. Nature Neuroscience Article https://doi.org/10.10... | Orbitofrontal cortex control of striatum
leads economic decision-making
https://doi.org/10.1038/s41593-023-01409-1
Received: 12 February 2023
Accepted: 17 July 2023
Published online: 17 August 2023
Check for updates
Felicity Gore1,2,3, Melissa Hernandez1,2, Charu Ramakrishnan
Ailey K. Crow1,2, Robert C. Malenka
... | Could not heal snippet |
10.1007_s00406-021-01302-7.pdf | null | null | European Archives of Psychiatry and Clinical Neuroscience (2022) 272:327–339
https://doi.org/10.1007/s00406-021-01302-7
ORIGINAL PAPER
P300 and delay‑discounting in obsessive–compulsive disorder
Vera Flasbeck1
· Björn Enzi1 · Christina Andreou2
· Georg Juckel1
· Paraskevi Mavrogiorgou1
Received: 27 October 20... | null |
10.1038_s42003-023-04981-1.pdf | Data availability
Plasmid sequences are available through the PLSDB database (https://ccb-microbe.cs.
uni-saarland.de/plsdb/) while plasmid metadata files are hosted in a Github repository
(https://github.com/LBHarrison/Lociq/). Source data for Figs. 3, 6 and 8 are provided in
Supplementary Data 3, 7 and 8, respectively... | Data availability Plasmid sequences are available through the PLSDB database ( https://ccb-microbe.cs. uni-saarland.de/plsdb/ ) while plasmid metadata files are hosted in a Github repository ( https://github.com/LBHarrison/Lociq/ ). Source data for Figs. 3, 6 and 8 are provided in Supplementary Data 3, 7 and 8, respect... | ARTICLE
https://doi.org/10.1038/s42003-023-04981-1
OPEN
Lociq provides a loci-seeking approach for
enhanced plasmid subtyping and structural
characterization
1✉
Lucas Harrison
, Shaohua Zhao1, Cong Li1, Patrick F. McDermott1, Gregory H. Tyson1 & Errol Strain1
;
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10.1038_s41588-023-01451-6.pdf | Data availability
Public and private data can be accessed through their respective por-
tals. Private data will require prior authorization. Data can be cleaned
and normalized using any standard or well-established procedure
for variant analysis or the procedures described in this paper, includ-
ing referenced papers o... | Data availability Public and private data can be accessed through their respective portals. Private data will require prior authorization. Data can be cleaned and normalized using any standard or well-established procedure for variant analysis or the procedures described in this paper, including referenced papers or pr... | Landscape of mSWI/SNF chromatin
remodeling complex perturbations
in neurodevelopmental disorders
https://doi.org/10.1038/s41588-023-01451-6
Received: 4 October 2022
Accepted: 20 June 2023
Published online: 27 July 2023
Check for updates
Alfredo M. Valencia1,2,3,10,11,12, Akshay Sankar1,3,12, Pleuntje J. van der ... | null |
10.1371_journal.pone.0240269.pdf | null | Genomics data are now available at the NCBI repository: https://www . Results | RESEARCH ARTICLE
Using association rule mining to jointly detect
clinical features and differentially expressed
genes related to chronic inflammatory
diseases
Rosana VeronezeID
RochaID
Fernando J. Von Zuben1, Raquel Mantuaneli Scarel-Caminaga2
3, Cla´ udia V. Maurer-Morelli3, Silvana Regina Perez Orrico4,5, Joni A. ... | Could not heal snippet |
10.1186_s12889-023-15632-9.pdf | Data availability
All datasets used for supporting the conclusions of this paper are available
from the corresponding author on request. | Data availability All datasets used for supporting the conclusions of this paper are available from the corresponding author on request. | Joseph et al. BMC Public Health (2023) 23:748
https://doi.org/10.1186/s12889-023-15632-9
BMC Public Health
Who are the vulnerable, and how do we reach
them? Perspectives of health system actors
and community leaders in Kerala, India
Jaison Joseph1*, Hari Sankar1, Gloria Benny1 and Devaki Nambiar1,2,3
Abstr... | null |
10.1016_j.yjsbx.2023.100085.pdf | Data availability
Micrographs are available at EMPIAR-11397. Reconstructions are
available on EMDB with the following accession codes: for Glacios 0-50
nm, EMD-29566; 50-100 nm, EMD-29567; 100-150 nm, EMD-29568;
150-200 nm, EMD-29569; 200-500 nm, EMD-29570. For Arctica in
counting mode 0-50 nm, EM... | Data availability Micrographs are available at EMPIAR-11397. Reconstructions are available on EMDB with the following accession codes: for Glacios 0-50 nm, EMD-29566; 50-100 nm, EMD-29567; 100-150 nm, EMD-29568; 150-200 nm, EMD-29569; 200-500 nm, EMD-29570. For Arctica in counting mode 0-50 nm, EMD-29573; 50-100 nm, EM... | Contents lists available at ScienceDirect
Journal of Structural Biology: X
journal homepage: www.sciencedirect.com/journal/journal-of-structural-biology-x
Measuring the effects of ice thickness on resolution in single particle
cryo-EM
Kasahun Neselu a, Bing Wang b, William J. Rice b, c, Clinton S. Potter a, Bridget... | null |
10.1016_S2213-2600(20)30559-2.pdf | null | Data sharing Access to all data and samples collected by ISARIC4C are controlled by an Independent Data and Materials Access Committee composed of representatives of research funders, academia, clinical medicine, public health, and industry. The application process for access to the data is available on the ISARIC4C we... | PDF file not found | |
10.1371_journal.pgph.0002891.pdf | Data Availability Statement: Data are included in
supporting materials. | Data are included in supporting materials. | RESEARCH ARTICLE
HIV epidemiologic trends among occupational
groups in Rakai, Uganda: A population-based
longitudinal study, 1999–2016
1, Joseph Kagaayi2,3, Joseph Ssekasanvu1,2, Robert Ssekubugu2,
Victor O. PopoolaID
Grace Kigozi2, Anthony Ndyanabo2, Fred Nalugoda2, Larry W. Chang1,2,4, Tom Lutalo2,
Aaron A. R. Tob... | null |
10.1038_s41467-023-38529-y.pdf | Data availability
Spike recording data in NWB format are available for download at
https://dandiarchive.org/dandiset/000060/draft. Source data are
provided with this paper. | Data availability Spike recording data in NWB format are available for download at https://dandiarchive.org/dandiset/000060/draft . Source data are provided with this paper. Code availability The Julia code for training spiking neural network is available at https:// github.com/SpikingNetwork/distributedActivity 75 . | Article
https://doi.org/10.1038/s41467-023-38529-y
Distributing task-related neural activity
across a cortical network through
task-independent connections
Received: 18 July 2022
Accepted: 5 May 2023
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Karel Svo... | null |
10.3390_biom11010118.pdf | Data Availability Statement: All data are contained within the article or supplementary materia | Data Availability Statement: All data are contained within the article or supplementary material. | Article
Ginsenoside Rg3 Prevents Oncogenic Long Noncoding RNA
ATXN8OS from Inhibiting Tumor-Suppressive
microRNA-424-5p in Breast Cancer Cells
Heejoo Kim †, Hwee Won Ji †, Hyeon Woo Kim , Sung Hwan Yun, Jae Eun Park and Sun Jung Kim *
Department of Life Science, Dongguk University-Seoul, Goyang 10326, Korea; heejoo09... | null |
10.1088_1402-4896_ad1320.pdf | Data availability statement
All data used are available in the manuscript. The data that support the findings of this study are available upon
reasonable request from the authors. | Data availability statement All data used are available in the manuscript. The data that support the findings of this study are available upon reasonable request from the authors. | Phys. Scr. 99 (2024) 015920
https://doi.org/10.1088/1402-4896/ad1320
PAPER
RECEIVED
31 October 2023
REVISED
26 November 2023
ACCEPTED FOR PUBLICATION
6 December 2023
PUBLISHED
15 December 2023
CO2 capture and storage by metal and non-metal decorated silicon
carbide nanotubes: a DFT study
Yahaya Saadu Itas1,∗
,... | null |
10.1038_s41467-023-37865-3.pdf | ndings of this study are available
in the RCSB Protein Data Bank (PDB) under accession numbers: 7LV2
[https://doi.org/10.2210/pdb7LV2/pdb],
7LTU [https://doi.org/10.
7LUX [https://doi.org/10.2210/
2210/pdb7LTU/pdb]
and 7LUZ [https://doi.org/10.2210/
pdb7LUX/pdb]
pdb7LUZ/pdb]. The amino acid sequences of the Nucleocapsi... | Data availability Atomic coordinates that support the findings of this study are available in the RCSB Protein Data Bank (PDB) under accession numbers: 7LV2 [ https://doi.org/10.2210/pdb7LV2/pdb ], 7LTU [ https://doi.org/10. 2210/pdb7LTU/pdb ] (form 1), 7LUX [ https://doi.org/10.2210/ pdb7LUX/pdb ] (form 2), and 7LUZ [... | Article
https://doi.org/10.1038/s41467-023-37865-3
Low complexity domains of the nucleocapsid
protein of SARS-CoV-2 form amyloid fibrils
Received: 29 July 2022
Accepted: 3 April 2023
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1,2,3,4, Xinyi Cheng 1,2,3,4, Lukasz Salwinski
1,... | null |
10.1111_jbfa.12686.pdf | DATA AVAILABILITY STATEMENT
The data that support the findings of this study are available from third parties. Restrictions apply to the availability
of these data, which were used under license for this study. Data are available from the authors with the permission of
third partie | DATA AVAILABILITY STATEMENT The data that support the findings of this study are available from third parties. Restrictions apply to the availability of these data, which were used under license for this study. Data are available from the authors with the permission of third parties. | Asymmetric trading responses to credit rating announcements from issuer-
Asymmetric trading responses to credit rating announcements from issuer-
versus investor-paid rating agencies
versus investor-paid rating agencies
Quan Pham Minh Nguyen, HX Do, A Molchanov, L Nguyen, NH Nguyen
Publication date
Publication date
0... | null |
10.1371_journal.pcbi.1007774.pdf | null | All relevant data are available at the github repository: https://github. com/mdkarcher/BEAST-XML . | PDF file not found | |
10.1088_1361-6382_ad0749.pdf | Data availability statement
All data that support the findings of this study are included within the article (and any supple-
mentary files). | Data availability statement All data that support the findings of this study are included within the article (and any supplementary files). | Class. Quantum Grav. 40 (2023) 235011 (14pp)
https://doi.org/10.1088/1361-6382/ad0749
Classical and Quantum Gravity
Reconciling absence of vDVZ discontinuity
with absence of ghosts in nonlocal
linearized gravity
D Dalmazi
UNESP—Campus de Guaratinguetá—DFI, CEP, 12516-410 Guaratinguetá, SP,
Brazil
E-mail: denis.d... | null |
10.1103_physrevd.105.123002.pdf | null | null | PHYSICAL REVIEW D 105, 123002 (2022)
Revisiting the dark matter interpretation of excess rates in semiconductors
Peter Abbamonte,1,* Daniel Baxter
Noah Kurinsky,6,∥
Yonatan Kahn,1,3,‡
Bashi Mandava ,1,7,¶ and Lucas K. Wagner1,8,**
Gordan Krnjaic,2,4,5,§
,2,†
1Department of Physics, University of Illinois at Urba... | null |
10.1371_journal.pone.0280975.pdf | Data Availability Statement: All relevant data are
within the paper and its Supporting Information
files. | All relevant data are within the paper and its Supporting Information files. | RESEARCH ARTICLE
Biochemical characterization of a GDP-
mannose transporter from Chaetomium
thermophilum
Gowtham Thambra Rajan PremageethaID
Sucharita BoseID
Samuel GrandfieldID
Subramanian RamaswamyID
4, Vinod NayakID
1,2*
2, Lavanyaa Manjunath2, Deepthi Joseph2, Aviv PazID
4,
2, Luis M. Bredeston5, Jeff Abrams... | null |
10.1186_s12934-021-01548-9.pdf | Availability of data and materials
The original contributions presented in the study are publicly available.
The raw sequence data reported in this paper have been deposited in the
Genome Sequence Archive (Genomics, Proteomics & Bioinformatics 2017) in
National Genomics Data Center (Nucleic Acids Res 2020), Beijing Ins... | Availability of data and materials The original contributions presented in the study are publicly available. The raw sequence data reported in this paper have been deposited in the Genome Sequence Archive (Genomics, Proteomics & Bioinformatics 2017) in National Genomics Data Center (Nucleic Acids Res 2020), Beijing Ins... | Yuan et al. Microb Cell Fact (2021) 20:53
https://doi.org/10.1186/s12934-021-01548-9
Microbial Cell Factories
RESEARCH
Open Access
The role of the gut microbiota
on the metabolic status of obese children
Xin Yuan1, Ruimin Chen1*
, Kenneth L. McCormick2, Ying Zhang1, Xiangquan Lin1 and Xiaohong Yang1
Abs... | null |
10.1038_s41586-023-05909-9.pdf | Data availability
The atomic coordinates and experimental data of RPB_PEW3_R4–
PAWx4, RPB_PLP3_R6–PLPx6, RPB_LRP2_R4–LRPx4, RPB_PLP1_R6–
PLPx6, RPB_PLP1_R6–PLPx6 (alternative conformation 1), RPB_PLP1_
R6–PLPx6 (alternative conformation 2) and RPB_LRP2_R4 (pseudo-
polymeric) have been deposited in the RCSB PDB with the... | Data availability The atomic coordinates and experimental data of RPB_PEW3_R4-PAWx4, RPB_PLP3_R6-PLPx6, RPB_LRP2_R4-LRPx4, RPB_PLP1_R6-PLPx6, RPB_PLP1_R6-PLPx6 (alternative conformation 1), RPB_PLP1_ R6-PLPx6 (alternative conformation 2) and RPB_LRP2_R4 (pseudopolymeric) have been deposited in the RCSB PDB with the acc... | De novo design of modular peptide-binding
proteins by superhelical matching
https://doi.org/10.1038/s41586-023-05909-9
Received: 10 April 2022
Accepted: 1 March 2023
Published online: 5 April 2023
Open access
Check for updates
Kejia Wu1,2,3,12, Hua Bai1,2,4,12, Ya-Ting Chang5, Rachel Redler5, Kerrie E. McNally6... | null |
10.1161_CIRCRESAHA.121.319314.pdf | null | Sources of Funding This work was funded by National Institutes of Health grants HL139819 and HL141256 to K. Walsh, HL152174 to S. Sano and K. Walsh, T32 HL007284 to N.W. Chavkin, and American Heart Association grant 20POST35210098 to M.A. Evans. | PDF file not found | |
10.1371_journal.pwat.0000213.pdf | Data Availability Statement: All data supporting
this study is free access data and the sources and
collections details are provided as supplementary
information accompanying this paper. The code
used for the analysis and results figures is also
made available at: https://github.com/J-Marcal/
WSF_IneqAnalysis. | All data supporting this study is free access data and the sources and collections details are provided as supplementary information accompanying this paper. The code used for the analysis and results figures is also made available at: https://github.com/J-Marcal/ WSF_IneqAnalysis . | RESEARCH ARTICLE
Assessing inequalities in urban water security
through geospatial analysis
Juliana Marc¸ alID
1,2*
Jan HofmanID
1,2*, Junjie Shen3, Blanca Antizar-Ladislao4,5, David Butler6,
1 Water Innovation and Research Centre (WIRC), Department of Chemical Engineering, University of Bath,
Bath, United Kingdom,... | null |
10.1371_journal.pone.0283795.pdf | Data Availability Statement: Data and codes are
available at: DOI:10.17605/OSF.IO/PS4RM. | Data and codes are available at: DOI:10.17605/OSF.IO/PS4RM. | RESEARCH ARTICLE
The Polish adaptation of the measurements
of rule-governed behaviors: Generalized
Pliance Questionnaire, Generalized Tracking
Questionnaire and Generalized Self-Pliance
Questionnaire
Joanna DudekID
1☯*, Maria Cyniak-Cieciura2☯, Paweł OstaszewskiID
3☯
a1111111111
a1111111111
a1111111111
a1111111111... | null |
10.1038_s41467-023-40247-4.pdf | null | Data availability The raw reads, and complete pathogen genomes generated in this study have been deposited in the Sequence Read Archive (SRA) and NCBI GenBank, respectively, under BioProject accession codes PRJNA824010 and PRJNA436552 . Sample metadata (collection date, state, age, sequencing machine, sequencing batch,... | Article
https://doi.org/10.1038/s41467-023-40247-4
Metagenomic surveillance uncovers diverse
and novel viral taxa in febrile patients from
Nigeria
Received: 18 January 2023
A list of authors and their affiliations appears at the end of the paper
Accepted: 10 July 2023
Check for updates
;
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0
9
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10.1016_j.jbc.2023.105075.pdf | Data availability
All data described within the article are contained in the
document. The mass spectrometry proteomics data have been
deposited to the ProteomeXchange Consortium via the PRIDE
(73) partner repository with the dataset identifier PXD042589.
Any further information and requests for resources and re-
agent... | null | RESEARCH ARTICLE
Lipoylation is dependent on the ferredoxin FDX1 and
dispensable under hypoxia in human cells
Received for publication, December 22, 2022, and in revised form, June 23, 2023 Published, Papers in Press, July 20, 2023,
https://doi.org/10.1016/j.jbc.2023.105075
Pallavi R. Joshi1,2,3, Shayan Sadre1,2,3
Fr... | null |
10.1112_blms.12639.pdf | null | null | ETH Library
The proportion of derangements
characterizes the symmetric and
alternating groups
Journal Article
Author(s):
Poonen, Bjorn; Slavov, Kaloyan
Publication date:
2022-08
Permanent link:
https://doi.org/10.3929/ethz-b-000544180
Rights / license:
Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 ... | null |
10.1007_s00440-023-01195-8.pdf | Data availability Data sharing not applicable to this article as no datasets were generated or analysed during
the current study. | Data availability Data sharing not applicable to this article as no datasets were generated or analysed during | Probability Theory and Related Fields
https://doi.org/10.1007/s00440-023-01195-8
Biased 2 × 2 periodic Aztec diamond and an elliptic curve
Alexei Borodin1 · Maurice Duits2
Received: 15 April 2022 / Revised: 15 December 2022 / Accepted: 14 January 2023
© The Author(s) 2023
Abstract
We study random domino tilings of ... | null |
10.1088_1361-648x_ad1135.pdf | Data availability statement
All data that support the findings of this study are included
within the article (and any supplementary files). | Data availability statement All data that support the findings of this study are included within the article (and any supplementary files). | J. Phys.: Condens. Matter 36 (2024) 115102 (10pp)
Journal of Physics: Condensed Matter
https://doi.org/10.1088/1361-648X/ad1135
Two modes of motions for a single disk
on the vibration stage
Liyang Guan1, Li Tian1, Meiying Hou2,3,∗
and Yilong Han1,∗
1 Department of Physics, Hong Kong University of Science and Te... | null |
10.1103_physrevresearch.4.043059.pdf | null | null | PHYSICAL REVIEW RESEARCH 4, 043059 (2022)
Class of distorted Landau levels and Hall phases in a two-dimensional electron gas
subject to an inhomogeneous magnetic field
Dominik Sidler
,1,2,* Vasil Rokaj
,1,3,† Michael Ruggenthaler,1,2,‡ and Angel Rubio 1,2,4,5,§
1Max Planck Institute for the Structure and Dynamics o... | null |
10.1038/s41523-022-00429-7 | null | DATA AVAILABILITY The datasets generated during and/or analyzed during the current study are available from the corresponding author on reasonable request. | www.nature.com/npjbcancer
OPEN
ARTICLE
A prospective trial of treatment de-escalation following
neoadjuvant paclitaxel/trastuzumab/pertuzumab in HER2-
positive breast cancer
Adrienne G. Waks1,2,3,13, Neelam V. Desai
Laura M. Spring3,7, Meredith Faggen3,8, Michael Constantine3,6, Otto Metzger1,2,3, Jillian Alberti1, J... | Could not heal snippet |
10.1186_s12915-020-00859-4.pdf | Availability of data and materials
All data generated or analysed during this study are included in this
published article, its supplementary information files and publicly available
repositories. | Availability of data and materials All data generated or analysed during this study are included in this published article, its supplementary information files and publicly available | Burns et al. BMC Biology (2020) 18:133
https://doi.org/10.1186/s12915-020-00859-4
R E S E A R C H A R T I C L E
Open Access
Retargeting azithromycin analogues to
have dual-modality antimalarial activity
Amy L. Burns1, Brad E. Sleebs2,3, Ghizal Siddiqui4, Amanda E. De Paoli4, Dovile Anderson4, Benjamin Liffn... | null |
10.1088_1361-6587_acff7f.pdf |
The data that support the findings of this study are openly
available at
the following URL/DOI. https://github.com/
YukiJajima/improved-spork/blob/main/NLD_data_CNN. | Data availability statement The data that support the findings of this study are openly available at the following URL/DOI. https://github.com/ YukiJajima/improved-spork/blob/main/NLD_data_CNN . | Plasma Phys. Control. Fusion 65 (2023) 125003 (8pp)
Plasma Physics and Controlled Fusion
https://doi.org/10.1088/1361-6587/acff7f
Estimation of 2D profile dynamics of
electrostatic potential fluctuations using
multi-scale deep learning
Yuki Jajima1, Makoto Sasaki1,∗, Ryohtaroh T Ishikawa2, Motoki Nakata2,3,
Tats... | null |
10.1007_s11538-020-00756-5.pdf | null | null | Bulletin of Mathematical Biology (2020) 82:74
https://doi.org/10.1007/s11538-020-00756-5
O R I G I N A L P A P E R
Population Dynamics with Threshold Effects Give Rise
to a Diverse Family of Allee Effects
Nabil T. Fadai1
· Matthew J. Simpson2
Received: 16 April 2020 / Accepted: 27 May 2020 / Published online: 12 J... | null |
10.1038_s41598-022-05932-2.pdf | Data availability
All ISI system code is deposited at https:// github. com/ haide rlab/ ISI, and source data and analysis code to rep-
licate the main results will be publicly available at DOI (https:// doi. org/ 10. 6084/ m9. figsh are. 16200 711) upon | Data availability All ISI system code is deposited at https:// github. com/ haide rlab/ ISI , and source data and analysis code to replicate the main results will be publicly available at DOI ( https:// doi. org/ 10. 6084/ m9. figsh are. 16200 711 ) upon publication. | OPEN
Optimizing intact skull intrinsic
signal imaging for subsequent
targeted electrophysiology
across mouse visual cortex
Armel Nsiangani1,3, Joseph Del Rosario1, Alan C. Yeh1, Donghoon Shin2, Shea Wells2,
Tidhar Lev‑Ari1, Brice Williams1 & Bilal Haider1*
Understanding brain function requires repeatable measurement... | null |
10.1038_s41598-022-07802-3.pdf | null | null | OPEN
Predicting individual perceptual
scent impression from imbalanced
dataset using mass spectrum
of odorant molecules
Tanoy Debnath1,3* & Takamichi Nakamoto1,2,3*
Predicting odor impression is considered an important step towards measuring the quality of scent
in the food, perfume, and cosmetic industries. In odor... | null |
10.1090_bproc_99.pdf | null | null | PROCEEDINGS OF THE
AMERICAN MATHEMATICAL SOCIETY, SERIES B
Volume 9, Pages 159–173 (April 12, 2022)
https://doi.org/10.1090/bproc/99
SEGRE-DEGENERATE POINTS FORM A SEMIANALYTIC SET
JI ˇR´I LEBL
(Communicated by Harold P. Boas)
Abstract. We prove that the set of Segre-degenerate points of a real-analytic
subvariety ... | null |
10.1371_journal.pone.0255335.pdf | Data Availability Statement: All relevant data are
within the manuscript and its Supporting
Information files. | All relevant data are within the manuscript and its Supporting Information files. Data curation: Melanie Ricke-Hoch, Elisabeth Stelling, Martina Kasten, Thomas Gausepohl, | RESEARCH ARTICLE
Impaired immune response mediated by
prostaglandin E2 promotes severe COVID-19
disease
1‡*, Elisabeth Stelling1‡, Lisa Lasswitz2, Antonia P. Gunesch2,3,4,
2,5,6, Thomas Pietschmann2,3, Virginie Montiel7, Jean-Luc Balligand7,
Melanie Ricke-HochID
Martina Kasten1, Francisco J. Zapatero-Belincho´ n2,5... | null |
10.1089_cmb.2022.0149.pdf | AVAILABILITY
IntOMICS is open source software written in R, under GPL-2, and available at https://bioconductor.org/
packages/IntOMICS. The implementation relies on existing R package | AVAILABILITY IntOMICS is open source software written in R, under GPL-2, and available at https://bioconductor.org/ packages/IntOMICS . The implementation relies on existing R packages. | JOURNAL OF COMPUTATIONAL BIOLOGY
Volume 30, Number 5, 2023
Mary Ann Liebert, Inc.
Pp. 569–574
DOI: 10.1089/cmb.2022.0149
Open camera or QR reader and
scan code to access this article
and other resources online.
IntOMICS: A Bayesian Framework for Reconstructing
Regulatory Networks Using Multi-Omics Data
ANNA PACˇ I´N... | null |
10.1093_gbe_evad119.pdf | Data Availability
NCBI accession numbers for all genes analyzed are provided
in supplementary data file 1, Supplementary Material online.
Alignments and trees used in positive selection analyses are
provided in supplementary data file 2, Supplementary
Material online. Genotypes for great ape species at th... | Data Availability NCBI accession numbers for all genes analyzed are provided in supplementary data file 1, Supplementary Material online. Alignments and trees used in positive selection analyses are provided in supplementary data file 2, Supplementary Material online. Genotypes for great ape species at the position of ... | GBE
Rapid Evolution of Glycan Recognition Receptors Reveals
an Axis of Host–Microbe Arms Races beyond Canonical
Protein–Protein Interfaces
Zoë A. Hilbert
Ellen M. Leffler
1,2,*, Paige E. Haffener1, Hannah J. Young1,2, Mara J.W. Schwiesow1,2,
1, and Nels C. Elde1,2,*
1Department of Human Genetics, University of Utah... | null |
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