IdA
stringlengths 6
21
| IdB
stringlengths 6
21
| labels
int64 0
2
| mechanism
stringclasses 40
values | effect
stringclasses 10
values | score
float64 0.1
0.99
⌀ | sentence
stringlengths 10
1.63k
⌀ | signor_id
stringlengths 12
14
|
|---|---|---|---|---|---|---|---|
O96014
|
O75084
| 2
|
binding
|
up-regulates activity
| 0.712
|
Consistent with this, xfz7 biochemically and functionally interacts with xwnt11
|
SIGNOR-78406
|
P29474
|
P62136
| 0
|
dephosphorylation
|
up-regulates activity
| 0.2
|
The increase in eNOS activity coincided with specific dephosphorylation of eNOS-Thr495, known to enhance eNOS activity. Inhibition of protein phosphatase 1 (PP1) by calyculin A, tautomycetin, or siRNA against PP1 reversed NF-induced eNOS-Thr495 dephosphorylation
|
SIGNOR-248558
|
P21728
|
P38405
| 2
|
binding
|
up-regulates activity
| 0.571
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ≥ -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ≥ -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ≥ -1.0.
|
SIGNOR-256939
|
Q9Y2A9
|
Q9NZQ7
| 1
|
glycosylation
|
up-regulates activity
| 0.2
|
These results further suggested that B3GNT3 mediates PD-L1 and PD-1 interaction through N-linked glycosylation instead of O-linked glycosylation
|
SIGNOR-275389
|
P20702
|
P02671
| 2
|
binding
|
up-regulates
| 0.387
|
To map the binding sites for four distinct ligands for mac-l: ic3b, fibrinogen, icam-1. __the i domain on the ot chain of mac-1 is an important recognition site for all four ligands.
|
SIGNOR-31320
|
Q16512
|
Q9NYL2
| 1
|
phosphorylation
|
up-regulates
| 0.2
|
Phosphorylation of mltkalpha by pknalpha enhances its kinase activity
|
SIGNOR-152768
|
Q9UPR3
|
Q9UNE7
| 0
|
polyubiquitination
|
down-regulates quantity by destabilization
| 0.398
|
Here, we report that the human ortholog of the yeast ever-shorter telomeres 1B (EST1B) binds HDAC8. This interaction is regulated by protein kinase A-mediated HDAC8 phosphorylation and protects human EST1B (hEST1B) from ubiquitin-mediated degradation. Phosphorylated HDAC8 preferentially recruits Hsp70 to a complex that inhibits the CHIP (C-terminal heat shock protein interacting protein) E3 ligase-mediated degradation of hEST1B.
|
SIGNOR-272649
|
Q14676
|
Q13315
| 0
|
phosphorylation
|
up-regulates
| 0.846
|
We show that, in response to ionizing radiation, mdc1 is hyperphosphorylated in an atm-dependent manner, and rapidly relocalizes to nuclear foci that also contain the mre11 complex, phosphorylated histone h2ax and 53bp1.
|
SIGNOR-98798
|
O60260
|
O00429
| 1
|
ubiquitination
|
down-regulates quantity
| 0.2
|
Parkin interacts with and subsequently ubiquitinates Drp1, thus promoting its proteasome dependent degradation .|We have demonstrated that parkin promotes Drp1 degradation after OGDR insult.
|
SIGNOR-278589
|
P52565
|
Q05209
| 0
|
dephosphorylation
|
up-regulates activity
| 0.2
|
Integrin-bound PTP-PEST dephosphorylates RhoGDI1.|Translocation of Src phosphorylated RhoGDI1 to the cell 's leading edge promotes local activation of Rac1 and Cdc42, whereas dephosphorylation of RhoGDI1 by integrin bound PTP-PEST promotes RhoGDI1 release from the membrane and sequestration of inactive Rac1 and Cdc42 in the cytoplasm.|Translocation of Src-phosphorylated RhoGDI1 to the cell's leading edge promotes local activation of Rac1 and Cdc42, whereas dephosphorylation of RhoGDI1 by integrin-bound PTP-PEST promotes RhoGDI1 release from the membrane and sequestration of inactive Rac1/Cdc42 in the cytoplasm.
|
SIGNOR-277175
|
P12931
|
Q8TEW6
| 2
|
binding
|
up-regulates
| 0.419
|
Insulin receptor-phosphorylated irs5/dok4 associates with rasgap, crk, src, and fyn, but not phosphatidylinositol 3-kinase p85, grb2, shp-2, nck, or phospholipase cgamma src homology 2 domains, and activates mapk in cells.
|
SIGNOR-101002
|
Q9UGL1
|
P48431
| 1
|
transcriptional regulation
|
down-regulates quantity by repression
| 0.309
|
Phosphorylation of KDM5B at Ser1456 attenuated the occupancy of KDM5B on the promoters of pluripotency genes.
|
SIGNOR-273450
|
P11831
|
Q09013
| 0
|
phosphorylation
|
up-regulates
| 0.289
|
Myotonic dystrophy protein kinase (DMPK), a muscle- and neuron-restricted kinase, enhanced SRF-mediated promoter activity of the skeletal and cardiac alpha-actin genes in C2C12 myoblasts as well as in nonmyogenic cells. | Threonine 159 in the MADS box alphaI coil was a specific phosphorylation target in vitro as well as in vivo of both DMPK and protein kinase C-alpha.
|
SIGNOR-236982
|
P05121
|
P00748
| 2
|
binding
|
down-regulates activity
| 0.305
|
C1INH is a serine protease inhibitor (serpin) that acts on both the complement pathway and the contact system and is the main inhibitor of the contact system by targeting both FXIIa and PK 9. Additionally, FXIIa can be inhibited by α1‐antitrypsin and plasminogen activator inhibitor‐1 (PAI‐1).
|
SIGNOR-263516
|
Q00534
|
P19484
| 1
|
phosphorylation
|
up-regulates activity
| 0.2
|
CDK4 and CDK6 phosphorylate TFEB and TFE3.
|
SIGNOR-279454
|
P49407
|
P28482
| 0
|
phosphorylation
|
down-regulates
| 0.727
|
Erk1 and erk2 phosphorylate beta-arrestin1 at ser-412 in vitro. . in the resting state, cytosolic arrestin1 proteins are constitutively phosphorylated by extracellular signal-regulated kinase (erk) at ser412, located within their distal c terminus. erk-phosphorylated arrestin1 is unable to associate with clathrin cages, whereas this constraint is removed upon its dephosphorylation
|
SIGNOR-67630
|
Q13464
|
P42574
| 0
|
cleavage
|
up-regulates
| 0.734
|
Rock i is cleaved by casp3 at a conserved detd1113/g sequence and its carboxy-terminal inhibitory domain is removed, resulting in deregulated and constitutive kinase activity.
|
SIGNOR-106546
|
Q8TD43
|
P17252
| 0
|
phosphorylation
|
up-regulates
| 0.2
|
Phorbol ester-induced activation of protein kinase c (pkc) increased the ca(2+) sensitivity of wild-type trpm4 but not of two mutants mutated at putative pkc phosphorylation sites.
|
SIGNOR-132243
|
Q15468
|
Q13526
| 2
|
binding
|
up-regulates
| 0.361
|
Cell cycle-dependent phosphorylation of sil is required for its interaction with pin1, a regulator of mitosis. Point mutation of the seven (s/t)p sites between amino acids 567 and 760 reduces mitotic phosphorylation of sil, pin1 binding, and spindle checkpoint duration.
|
SIGNOR-138677
|
P26038
|
Q5S007
| 0
|
phosphorylation
|
up-regulates activity
| 0.551
|
This led to the discovery that moesin, a protein which anchors the actin cytoskeleton to the plasma membrane, is efficiently phosphorylated by lrrk2, at thr558. Moesin phosphorylation could be essential to support the cytoskeletal changes accompanying this process.
|
SIGNOR-154498
|
P37231
|
Q9HAZ2
| 2
|
binding
|
up-regulates
| 0.469
|
Prdm16 stimulates brown adipogenesis by binding to ppar-gamma (peroxisome-proliferator-activated receptor-gamma) and activating its transcriptional function
|
SIGNOR-180298
|
O00592
|
P19544
| 0
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.409
|
Binding of WT1 to conserved elements within the Podocalyxin gene promoter results in potent transcriptional activation, and the specific expression pattern of Podocalyxin in the developing kidney mirrors that of WT1 itself.
|
SIGNOR-252300
|
Q08050
|
P53350
| 0
|
phosphorylation
|
up-regulates
| 0.705
|
It has been reported that plk1 could directly phosphorylate foxm1 at ser-715 and ser-724 for full activation and proper mitotic progression
|
SIGNOR-187892
|
P61586
|
Q70Z35
| 0
|
guanine nucleotide exchange factor
|
up-regulates activity
| 0.406
|
We therefore developed a screening-compatible live-cell imaging assay, using FRET-based biosensors for the prototype GTPases RHOA, RAC1 and CDC4215,19,20 (Extended Data Fig. 2 and Supplementary Note 1)|We found catalytic activities for 45/75 RhoGEFs and 48/63 RhoGAPs| Our data thus not only reveal extensive promiscuity among regulators, but also that the inactivating RhoGAPs are less selective than the activating RhoGEFs (p-value=0.02)(Supplementary Table 2).
|
SIGNOR-260570
|
P51795
|
Q96PU5
| 0
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.292
|
The presence of albumin triggers the formation of an endocytic complex that includes ClC-5. (iii) Nedd4-2 is recruited to this complex and ubiquitinates ClC-5. This ubiquitination by Nedd4-2 shunts ClC-5 into the albumin uptake/degradative pathway.
|
SIGNOR-272665
|
Q9UQK1
|
P13807
| 2
|
binding
|
up-regulates
| 0.851
|
In the liver, PTG and PPP1R3B(GL)are expressed at roughly equivalent levels [55], and they jointly promote hepatic glycogen mobilization and storage. PTG overexpression significantly increased glycogen content, mainly due to its ability to promote the redistribution of PP1 and glycogen synthase to glycogen granules, significantly increasing GS activity and glycogen synthesis (Figure 2)
|
SIGNOR-271733
|
P51587
|
Q06609
| 2
|
binding
|
up-regulates activity
| 0.947
|
We suggest that interactions of the BRCA2 C-terminal region with RAD51 may facilitate efficient nucleation of RAD51 multimers on DNA and thereby stimulate recombination-mediated repair.
|
SIGNOR-259905
|
Q00613
|
P19784
| 0
|
phosphorylation
|
up-regulates
| 0.348
|
Transcriptional activity and dna binding of heat shock factor-1 involve phosphorylation on threonine 142 by ck2.As hsf1 is activated by heat shock simultaneously with the nuclear translocation of the protein kinase ck2, we have investigated the role of ck2 in hsf1 activatio
|
SIGNOR-99606
|
Q14258
|
Q969H0
| 1
|
ubiquitination
|
down-regulates activity
| 0.264
|
This newly stabilized TRIM25 then directly ubiquitinates Lys412 of FBXW7α, a core subunit of the SKP1-Cullin-F-box (SCF) ubiquitin ligase complex involved in Myc ubiquitination, thereby stabilizing Myc.
|
SIGNOR-277457
|
Q13541
|
P19784
| 0
|
phosphorylation
|
down-regulates activity
| 0.333
|
The kinase is quite distinct from casein kinase 2, which also phosphorylates Ser-111 of 4E-BP1. The possible importance of these kinases in the phosphorylation of 4E-BP1 in fat cells is discussed. It is suggested that the phosphorylation of Ser-111 might be a priming event that facilitates the subsequent phosphorylation of Thr-36, Thr-45, Ser-64 and Thr69 by a rapamycin-sensitive process that initiates the dissociation of 4E-BP1 from eIF4E and hence the formation of the eIF4F complex.
|
SIGNOR-249334
|
Q13642
|
P12931
| 0
|
phosphorylation
|
up-regulates activity
| 0.26
|
However, overexpression of Src promoted most of the Flag-FHL1-WT to translocate to the nucleus, whereas the Flag-FHL1-Y149-272F mutant (phosphorylation deficient mutant) remained in the cytoplasm (XREF_FIG).|We found that Src phosphorylates FHL1 at Y149 and Y272, demonstrating that FHL1 is a bona fide novel substrate of Src.
|
SIGNOR-278213
|
O75592
|
P10275
| 1
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.2
|
We identified several E3 ligases as strong candidates responsible for AR and MYC protein loss as HECTD4, MYCBP2, and TRIM49. HECTD4 and MYCBP2 target AR and MYC for degradation while TRIM49 appears to promote AR and MYC stability. We have shown that these E3 ligases in turn are directly regulated by MYC. MYC in turn represses the expression of ubiquitin ligases, HECTD4 and MYCBP2 that promote AR and MYC protein degradation, further suppressing MYC and AR in a feed forward loop.
|
SIGNOR-267149
|
P04049
|
Q02750
| 2
|
phosphorylation
|
up-regulates activity
| 0.749
|
Among other effectors, active ras binds and activates the raf kinase, iniziating a kinase cascade involving serine phosporylation of mek1/2 (mapkk) and tyrosine and threonine phosphorylation of erk1/2 active raf phosphorylates mek phospholpeptide analysis demostrated that serine residues 218 and 222 of human mek1 are the primary sites for phosphorylation by c-raf.
|
SIGNOR-235987
|
P00533
|
P51452
| 0
|
dephosphorylation
|
down-regulates activity
| 0.357
|
We found that EGF receptor (EGFR) was a direct substrate of VHR and that overexpression of VHR down-regulated EGFR phosphorylation, particularly at Tyr-992 residue. Expression of VHR inhibited the activation of phospholipase Cγ and protein kinase C, both downstream effectors of Tyr-992 phosphorylation of EGFR.
|
SIGNOR-248532
|
Q7Z434
|
Q9BQ95
| 2
|
binding
|
up-regulates activity
| 0.428
|
ECSIT interacts with IPS-1|ECSIT enhances IPS-1-mediated IFN-Beta promoter activation
|
SIGNOR-260371
|
Q05655
|
P07948
| 0
|
phosphorylation
|
down-regulates activity
| 0.557
|
Src, Fyn, or Lyn are the essential kinases that tyrosine phosphorylate and inactivate PKC δ. Lyn phosphorylates tyrosine residue 565 in vitro
|
SIGNOR-251407
|
Q8IU57
|
Q8IU54
| 2
|
binding
|
up-regulates
| 0.873
|
Il-28 and il-29 interacted with a heterodimeric class ii cytokine receptor that consisted of il-10 receptor beta (il-10rbeta) and an orphan class ii receptor chain, designated il-28ralpha.
|
SIGNOR-96174
|
Q8IVT5
|
Q7Z569
| 0
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.661
|
Here we report on a novel interaction between the E3 ligase BRAP (also referred to as IMP), a negative regulator of the MAPK scaffold protein KSR, and two closely related deubiquitylases, USP15 and USP4. USP15 as well as USP4 oppose the autoubiquitylation of BRAP, whereas BRAP promotes the ubiquitylation of USP15.
|
SIGNOR-272028
|
Q16695
|
Q96T68
| 0
|
methylation
|
up-regulates activity
| 0.2
|
Here, we have characterized a previously undescribed member of the histone H3K9 methyltransferase family named CLLD8 (or SETDB2 or KMT1F). This protein contributes to the trimethylation of both interspersed repetitive elements and centromere-associated repeats and participates in the recruitment of heterochromatin protein 1 to centromeres. Methylation of histone H3 at lysine 9 (H3K9) has emerged as an important player in the formation of heterochromatin, chromatin condensation, and transcriptional repression.
|
SIGNOR-263895
|
P63096
|
P32745
| 2
|
binding
|
up-regulates activity
| 0.58
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ≥ -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ≥ -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ≥ -1.0.
|
SIGNOR-256677
|
P48454
|
P24588
| 0
|
relocalization
|
up-regulates activity
| 0.262
|
Using a viral-mediated molecular replacement strategy in rat hippocampal slices, we found that AKAP is required for NMDA receptor-dependent long-term depression solely because of its interaction with calcineurin
|
SIGNOR-261291
|
Q14247
|
Q05397
| 0
|
phosphorylation
|
down-regulates activity
| 0.745
|
FAK directly phosphorylates cortactin at Y421 and Y466 and over-expression of cortactin Y421, Y466, and Y482 mutated to phenylalanine (3YF) prevented FAK-enhanced FA turnover and cell motility.|GFP-FAK re-expression in FAK-/- MEFs enhances FA turnover (XREF_FIG) and cortactin knockdown slows FA turnover (XREF_FIG).
|
SIGNOR-278283
|
Q9Y294
|
Q86UE8
| 0
|
phosphorylation
|
up-regulates quantity by stabilization
| 0.668
|
We found that only S192A in hASF1a and S198A in hASF1b significantly affected phosphorylation by hTLK2 | Consistent
|
SIGNOR-260787
|
P12830
|
P24941
| 0
|
phosphorylation
|
down-regulates quantity by destabilization
| 0.429
|
Priming phosphorylation of Cdh1 by the Cdk2/cyclin A kinase complex allows Plk1 to bind to Cdh1 and phosphorylate Cdh1 at Ser138 and Ser146. Phosphorylation of Cdh1 at Ser138 and Ser146 then triggers its interaction with, and subsequent ubiquitination by, SCFbeta-TRCP
|
SIGNOR-274049
|
Q7L590
|
P09884
| 1
|
relocalization
|
up-regulates quantity by stabilization
| 0.862
|
Mcm10 is an essential eukaryotic protein required for the initiation and elongation phases of chromosomal replication. Specifically, Mcm10 is required for the association of several replication proteins, including DNA polymerase alpha (pol alpha), with chromatin.
|
SIGNOR-261271
|
P00519
|
Q00987
| 1
|
phosphorylation
|
down-regulates activity
| 0.716
|
C-abl binds and phosphorylates mdm2 in vivo and in vitro;phosphorylation of mdm2 by c-abl impairs the inhibition of p53 by mdm2.
|
SIGNOR-90512
|
P12931
|
P29474
| 1
|
phosphorylation
|
up-regulates activity
| 0.42
|
Two kinases, i.e. abelson-tyrosine protein kinase (ABL)1 and Src were identified as eNOS Tyr81 kinases as their inhibition and down-regulation significantly reduced the basal and Yoda1-induced tyrosine phosphorylation and activity of eNOS.
|
SIGNOR-277520
|
P63151
|
P30291
| 1
|
dephosphorylation
|
up-regulates quantity by stabilization
| 0.385
|
Knockout of FAM122A results in activation of PP2A-B55α, a phosphatase that dephosphorylates the WEE1 protein and rescues WEE1 from ubiquitin-mediated degradation. in tumor cells with oncogene-driven replication stress, CHK1 can directly phosphorylate FAM122A, leading to activation of the PP2A-B55α phosphatase and increased WEE1 expression.
|
SIGNOR-266381
|
Q96GD4
|
Q3KR16
| 1
|
phosphorylation
|
up-regulates
| 0.254
|
In this study we report that aurora b-mediated phosphorylation of myogef at thr-544 creates a docking site for plk1, leading to the localization and activation of myogef at the central spindle.
|
SIGNOR-204534
|
Q05655
|
Q9Y2R2
| 1
|
phosphorylation
|
down-regulates
| 0.314
|
We show that lyp is phosphorylated exclusively at ser-35 by pkc both in vitro and in vivo. our data establish a mechanism by which pkc could attenuate the cellular function of lyp, thereby augmenting t cell activation.
|
SIGNOR-159591
|
Q9NR96
|
Q8IUC6
| 2
|
binding
|
up-regulates activity
| 0.439
|
To initiate the innate immune response, Toll-like receptors (TLRs) associate with cytoplasmic adaptor proteins through TIR (Toll/interleukin-1 receptor) domain interactions. The four principal signaling adaptor proteins include MyD88, MAL, TRIF and TRAM, and the fifth protein SARM, involved in negative regulation of TLR pathways, is usually considered a part of the TIR domain-containing adaptor protein group
|
SIGNOR-266749
|
P60891
|
Q9UHD2
| 0
|
phosphorylation
|
up-regulates activity
| 0.2
|
Here, we show that ionizing radiation results in TBK1-mediated phosphorylation of phosphoribosyl pyrophosphate synthetase (PRPS)1/2 at T228, thereby enhancing PRPS1/2 catalytic activity and promoting deoxyribonucleotide synthesis.
|
SIGNOR-277316
|
Q16566
|
P14866
| 1
|
phosphorylation
|
up-regulates
| 0.379
|
Here we show that the regulation of the stress axis-regulated exon of the slo1 potassium channel transcripts by membrane depolarization requires a highly conserved camkiv target serine (ser-513) of the heterogeneous ribonucleoprotein l. Ser-513 phosphorylation within the rna recognition motif 4 enhanced heterogeneous ribonucleoprotein l interaction with the camkiv-responsive rna element 1 of stress axis-regulated exon and inhibited binding of the large subunit of the u2 auxiliary factor u2af65.
|
SIGNOR-197367
|
Q9BPV8
|
Q03113
| 2
|
binding
|
up-regulates activity
| 0.2
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ≥ -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ≥ -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ≥ -1.0.
|
SIGNOR-257231
|
P32119
|
P00519
| 0
|
phosphorylation
|
down-regulates activity
| 0.284
|
Inactivation of peroxiredoxin I by phosphorylation allows localized H(2)O(2) accumulation for cell signaling. To determine whether Prxs are phosphorylated, we subjected recombinant human PrxI and II to an in vitro kinase assay with two nonreceptor PTKs, Lck and Abl, in the presence of [γ-32P]ATP. Both PTKs phosphorylated PrxI and PrxII. Phosphorylation of the wild-type protein was detected, whereas that of the Y194F mutant was not (Figure 1B), indicating that Tyr194 is the only site of tyrosine phosphorylation.
|
SIGNOR-276280
|
P38936
|
P24941
| 2
|
binding
|
down-regulates
| 0.954
|
Considering that akt1 phosphorylates p21, this dissociation likely results from phosphorylation of p21 and release of cdk2.
|
SIGNOR-149711
|
Q16611
|
Q9NR28
| 1
|
relocalization
|
up-regulates
| 0.522
|
Bax and/or bak-mediated release of pro-apoptotic mediators including smac/diablo and omi
|
SIGNOR-118905
|
Q13224
|
Q00535
| 0
|
phosphorylation
|
down-regulates quantity
| 0.443
|
Cdk5 phosphorylates NR2B at Ser1116 and controls surface level expression.|Reduction in Cdk5 activity, as well as disruption of Cdk5-NR2B interactions consistently increased NR2B surface levels and facilitated NMDA mediated synaptic function.
|
SIGNOR-278265
|
Q9UHD2
|
P31749
| 1
|
phosphorylation
|
up-regulates
| 0.407
|
Upon mitogen stimulation, triggering of the innate immune response, re-exposure to glucose, or oncogene activation, tbk1 is recruited to the exocyst, where it activates akt. Akt is a direct tbk1 substrate that connects tbk1 to prosurvival signaling.
|
SIGNOR-252608
|
P50542
|
P51668
| 0
|
ubiquitination
|
up-regulates activity
| 0.388
|
Here we report on the identification of the protein-ubiquitin ligases that are responsible for the ubiquitination of the peroxisomal protein import receptor Pex5. It is demonstrated that each of the three RING peroxins Pex2, Pex10, and Pex12 exhibits ubiquitin-protein isopeptide ligase activity. Our results show that Pex2 mediates the Ubc4-dependent polyubiquitination whereas Pex12 facilitates the Pex4-dependent monoubiquitination of Pex5.While polyubiquitinated Pex5 is degraded by the proteasome, monoubiquitinated Pex5 is destined for a new round of the receptor cycle.
|
SIGNOR-253022
|
Q13131
|
P49815
| 1
|
phosphorylation
|
up-regulates activity
| 0.682
|
However, AMP-activated protein kinase (AMPK), an essential cellular energy sensor, phosphorylates and activates TSC2 [ xref ].
|
SIGNOR-278981
|
Q9HA82
|
P68400
| 0
|
phosphorylation
|
up-regulates activity
| 0.2
|
Most of the phosphorylated residues conformed to a consensus motif for phosphorylation by casein kinase 2 (CK2), and treatment of cells with the CK2-specific inhibitor CX-4945 lowered the phosphorylation levels of CERS2, -4, -5, and -6. Phosphorylation of CERS2 was especially important for its catalytic activity, acting mainly by increasing itsVmaxvalue.
|
SIGNOR-273984
|
Q13568
|
O14920
| 0
|
phosphorylation
|
up-regulates activity
| 0.37
|
Here we present evidence that the kinase IKKbeta phosphorylates and activates IRF5 in response to stimulation in several inflammatory pathways, including those emanated from Toll like receptors and retinoic acid inducible gene I like receptors.|Recombinant IKK\u03b2 phosphorylated IRF5 at Ser-445 in vitro, and a point mutation of this serine abolished IRF5 activation and cytokine production.
|
SIGNOR-279466
|
O14920
|
Q9H765
| 2
|
phosphorylation
|
up-regulates activity
| 0.2
|
We found that ASB8 was phosphorylated at the N-terminal Ser-31 by host IkappaB kinase beta (IKKbeta). In turn, ASB8 facilitated K48-linked ubiquitination and degradation of IKKbeta via the ubiquitin-proteasome pathway, resulting in remarkable inhibition of I-kappa-B-alpha (IkappaBalpha) and of p65 phosphorylation, consequently suppressing NF-kappaB activity.
|
SIGNOR-272242
|
O14965
|
Q9UM11
| 2
|
binding
|
down-regulates quantity by destabilization
| 0.561
|
We previously showed that human Aurora-A is turned over through the anaphase promoting complex/cyclosome (APC/C)–ubiquitin–proteasome pathway. The association of two distinct WD40 repeat proteins known as Cdc20 and Cdh1, respectively, sequentially activates the APC/C. The present study shows that Aurora-A degradation is dependent on hCdh1 in vivo, not on hCdc20, and that Aurora-A is targeted for proteolysis through distinct structural features of the destruction box, the KEN box motifs and its kinase activity.
|
SIGNOR-272610
|
P12757
|
Q15797
| 2
|
binding
|
down-regulates
| 0.482
|
Ski also represses bmp signaling through interactions with smad4 and bmp-specific r-smads, smad1 or smad7
|
SIGNOR-195636
|
P16885
|
Q96QT4
| 0
|
phosphorylation
|
up-regulates activity
| 0.263
|
We present data indicating that TRPM7 phosphorylates phospholipase C\u03b32 at position Ser1164 in the C2-domain, and at position Thr1045 in the linker between the catalytic region and the C2 domain.
|
SIGNOR-278460
|
Q13882
|
P22681
| 1
|
phosphorylation
|
down-regulates activity
| 0.488
|
Herein we report that PTK6 phosphorylates and down-regulates E3 ubiquitin ligase c-Cbl.
|
SIGNOR-279348
|
Q13185
|
O14965
| 0
|
phosphorylation
|
up-regulates activity
| 0.363
|
We report for the first time that during mitotic cell division, heterochromatin protein 1\u03b3 colocalizes and is phosphorylated at serine 83 in G2/M phase by Aurora A.
|
SIGNOR-280185
|
P60953
|
Q12982
| 2
|
binding
|
up-regulates activity
| 0.709
|
Cdo-bnip-2-cdc42 complex stimulates cdc42 activation which in turn promotes p38 alpha/beta activity and cell differentiation.
|
SIGNOR-179861
|
P17252
|
P21731-2
| 1
|
phosphorylation
|
down-regulates activity
| 0.521
|
These data suggest a model whereby agonist-induced PKC phosphorylation of Ser(145) partially impairs TPbeta signalling while GRK2/3 phosphorylation at both Ser(239) and Ser(357) within its IC(3) and C-tail domains, respectively, sterically inhibits G-protein coupling, profoundly desensitizing signalling, and promotes beta-arrestin association and, in turn, facilitates TPbeta internalization.
|
SIGNOR-274092
|
P04637
|
P14921
| 2
|
binding
|
down-regulates activity
| 0.53
|
We demonstrate that p53 and ets-1 coregulate TXSA in an antagonistic and inter-related manner, with ets-1 being a potent transcriptional activator and p53 inhibiting ets-1-dependent transcription. We show that ets-1 and p53 associate physically in vitro and in vivo and that their interaction, rather than a direct binding of p53 to the TXSA promoter, is required for transcriptional repression of TXSA by wild-type p53.
|
SIGNOR-254087
|
P31749
|
Q12906
| 1
|
phosphorylation
|
up-regulates activity
| 0.367
|
Upon T cell activation, NF90 translocates from the nucleus into the cytoplasm, where it binds to the AU-rich element-containing 3' untranslated regions of IL-2 mRNA and stabilizes it.|Our previous work showed that CD28 costimulation of T cells activated AKT to phosphorylate NF90 at Ser647 and caused NF90 to undergo nuclear export and stabilize IL-2 mRNA.
|
SIGNOR-252512
|
O96017
|
P78527
| 0
|
phosphorylation
|
up-regulates
| 0.59
|
We have found that dna-pk is the major constituent of an activity present in extracts of mammalian cells that phosphorylates chk2. Our results suggest that hypophosphorylated chk2 can be phosphorylated at thr68 by dna-pk in vitro.
|
SIGNOR-133384
|
Q9NSA3
|
P35222
| 2
|
binding
|
down-regulates
| 0.816
|
We identify a novel beta-catenin-interacting protein, icat, that was found to inhibit the interaction of beta-catenin with tcf-4 and represses beta-catenin-tcf-4-mediated transactivation.
|
SIGNOR-79399
|
Q16644
|
Q14457
| 1
|
phosphorylation
|
up-regulates activity
| 0.425
|
Taken together, these data indicate that MK2 and MK3 directly phosphorylate Beclin 1 S90 in vitro, and that MK2 like kinase activity also mediates starvation induced Beclin 1 S90 phosphorylation in cultured cells.
|
SIGNOR-279342
|
O95837
|
P28335
| 2
|
binding
|
up-regulates activity
| 0.435
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ≥ -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ≥ -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ≥ -1.0.
|
SIGNOR-257295
|
O00230
|
Q92847
| 2
|
binding
|
up-regulates
| 0.471
|
In human tissues cst-14 as well as cst-17 but not ss-14 bind the gh secretagogue receptor (ghs-r).
|
SIGNOR-91134
|
O15511
|
P17252
| 0
|
phosphorylation
|
up-regulates activity
| 0.2
|
PKC\u03b1 phosphorylates and activates ARPC5, which organizes the actin net dorsolateral of nucleus.
|
SIGNOR-280078
|
P02461
|
Q8IYK4
| 0
|
glycosylation
|
up-regulates activity
| 0.404
|
Recombinant GLT25D1 and GLT25D2 enzymes showed a strong galactosyltransferase activity toward various types of collagen and toward the serum mannose-binding lectin MBL, which contains a collagen domain. Amino acid analysis of the products of GLT25D1 and GLT25D2 reactions confirmed the transfer of galactose to hydroxylysine residues.
|
SIGNOR-261158
|
Q92574
|
O43524
| 0
|
transcriptional regulation
|
up-regulates quantity
| 0.448
|
FoxO3a binds to and transactivates the TSC1 promoter, indicating a key role for FoxO3a in regulating TSC1 expression. Together, these data demonstrate that FoxO3a regulates glycolysis downstream of Akt through transcriptional control of Tsc1
|
SIGNOR-259382
|
Q14653
|
P01574
| 1
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.665
|
Similarly, exogenous expression of wild-type Pin1 suppressed TLR3-mediated, IRF3-dependent activation of the IFN-beta promoter and reduced IFN-beta secretion in culture supernatants
|
SIGNOR-252257
|
P02462
|
Q8NBJ5
| 0
|
glycosylation
|
up-regulates activity
| 0.402
|
Recombinant GLT25D1 and GLT25D2 enzymes showed a strong galactosyltransferase activity toward various types of collagen and toward the serum mannose-binding lectin MBL, which contains a collagen domain. Amino acid analysis of the products of GLT25D1 and GLT25D2 reactions confirmed the transfer of galactose to hydroxylysine residues.
|
SIGNOR-261155
|
P63104
|
P53779
| 0
|
phosphorylation
|
down-regulates
| 0.2
|
Jnk phosphorylates 14-3-3zetaat ser-184 and 14-3-3sigmaat ser-190
|
SIGNOR-124009
|
Q9UN36
|
P53355
| 0
|
phosphorylation
|
up-regulates activity
| 0.273
|
DAPK1 phosphorylates and activates N-myc downstream-regulated gene 2 (NDRG2), resulting in increased tau phosphorylation via a reduction in Pin1 expression ( xref ; xref ).
|
SIGNOR-279983
|
P35372
|
P01213
| 0
|
chemical activation
|
up-regulates activity
| 0.674
|
Accordingly, for the OTDP, the binding affinity and activity of a large number of opiate compounds have been tested at μ-, δ-, and κ-opiate receptors. Binding studies were originally conducted in guinea pig brain membranes, and subsequent studies have been carried out in CHO cells transfected with human receptors. Table 7 shows a biochemical method for determining activity and potency of opioid compounds, stimulation of [35S]GTPγS binding in membranes from cells transfected with human μ, δ, or κ receptors.
|
SIGNOR-258414
|
P25103
|
P19086
| 2
|
binding
|
up-regulates activity
| 0.289
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ≥ -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ≥ -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ≥ -1.0.
|
SIGNOR-257316
|
Q9BZM5
|
P26718
| 2
|
binding
|
up-regulates
| 0.586
|
Here we describe a family of gpi-anchored cell surface proteins that function as ligands for the mouse activating nkg2d receptor. These molecules are encoded by the retinoic acid early inducible (rae-1) and h60 minor histocompatibility antigen genes on mouse chromosome 10 and show weak homology with mhc class i.
|
SIGNOR-79233
|
O14757
|
P30305
| 1
|
phosphorylation
|
down-regulates activity
| 0.785
|
Here, we show that cdc25b is phosphorylated by chk1 in vitro on multiple residues, including s230 and s563.We show that the s230-phosphorylated form of cdc25b is located at the centrosome from early s phase until mitosis. Furthermore, mutation of s230 to alanine increases the mitotic-inducing activity of cdc25b
|
SIGNOR-149898
|
Q15139
|
Q8NEB9
| 1
|
phosphorylation
|
up-regulates activity
| 0.371
|
PKD phosphorylates Vps34, leading to activation of Vps34, phosphatydilinositol-3-phosphate formation, and autophagosome formation.|Therefore, PKD phosphorylates Vps34 on multiple sites, including Thr677 within the catalytic domain.
|
SIGNOR-278495
|
P15498
|
P06241
| 0
|
phosphorylation
|
up-regulates
| 0.636
|
Study of t cells from a fyn-deficient tcr transgenic mouse also showed that fyn was required for tyrosine phosphorylation and activation of vav induced by both antagonist and agonist peptides.
|
SIGNOR-82287
|
Q15768
|
P54764
| 2
|
binding
|
up-regulates
| 0.838
|
Receptors of the epha group preferentially interact with glycosylphosphatidylinositol (gpi)-linked ligands (of the ephrin-a subclass, which comprises five ligands), while receptors of the ephb group preferentially interact with transmembrane ligands (of the ephrin-b subclass, which comprises three ligands) (table 1). In either case, binding of a ligand results in eph receptor autophosphorylation on tyrosine residues and activation of the kinase activity of the eph receptor
|
SIGNOR-52621
|
Q9H300
|
Q9BXM7
| 1
|
cleavage
|
down-regulates quantity by destabilization
| 0.613
|
Using an unbiased RNA-mediated interference (RNAi)-based screen, we identified four mitochondrial proteases, mitochondrial processing peptidase (MPP), presenilin-associated rhomboid-like protease (PARL), m-AAA and ClpXP, involved in PINK1 degradation. We find that PINK1 turnover is particularly sensitive to even modest reductions in MPP levels. Moreover, PINK1 cleavage by MPP is coupled to import such that reducing MPP activity induces PINK1 accumulation at the mitochondrial surface, leading to Parkin recruitment and mitophagy.
|
SIGNOR-261364
|
Q8NFZ4
|
Q9NQX3
| 2
|
binding
|
up-regulates activity
| 0.473
|
Gephyrin is believed to act as a scaffold at inhibitory synapses, in a manner analogous to that of the prototypic excitatory synaptic scaffold, PSD-95. The best-known function of gephyrin is to bring the inhibitory synaptic receptors and to stabilize them at the inhibitory synapses. gephyrin interacts with NL-2 and collybistin, suggesting that it may be critical for the maturation or maintenance of inhibitory synapses.
|
SIGNOR-264974
|
P06400
|
Q00987
| 0
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.667
|
In this study, we found that Mdm2, a ubiquitin ligase for p53, promoted ubiquitin-dependent degradation of pRB
|
SIGNOR-278530
|
O14746
|
P49711
| 0
|
transcriptional regulation
|
down-regulates quantity by repression
| 0.328
|
CTCF binds the proximal exonic region of hTERT and inhibits its transcription
|
SIGNOR-253832
|
Q9Y4I1
|
P31751
| 0
|
phosphorylation
|
up-regulates activity
| 0.458
|
Here we identify an Akt consensus phosphorylation motif in the actin-based motor protein myosin 5a and show that insulin stimulation leads to phosphorylation of myosin 5a at serine 1650. This Akt-mediated phosphorylation event enhances the ability of myosin 5a to interact with the actin cytoskeleton.Taken together, these data indicate that myosin 5a is a newly identified direct substrate of Akt2 and, upon insulin stimulation, phosphorylated myosin 5a facilitates anterograde movement of GLUT4 vesicles along actin to the cell surface.
|
SIGNOR-262632
|
Q13422
|
P43405
| 0
|
phosphorylation
|
up-regulates
| 0.404
|
Syk phoshorylatesikarosat unique c-terminal serine phosphorylation sites s358 and s361, thereby augmenting its nuclear localization and sequence-specific dna binding activity. Mechanistically, we establish that syk-inducedikarosactivation is essential for its nuclear localization and optimal transcription factor function.
|
SIGNOR-199100
|
P78352
|
P00519
| 0
|
phosphorylation
|
up-regulates activity
| 0.441
|
Moreover, c-Abl phosphorylates PSD-95 at tyrosine 533.|c-Abl modulates the synaptic contact number and PSD-95 clustering.
|
SIGNOR-278391
|
P12931
|
P84022
| 1
|
phosphorylation
|
up-regulates activity
| 0.377
|
Although the role of ERK in mediating phosphorylation of Smad2/3 remains to be investigated, our data indicate that early Smad3 phosphorylation is independent of transient EGFR transactivation and ERK1/2 activation initiated by HB-EGF release, whereas Src mediated chronic EGFR transactivation and ERK1/2 activation involve late Smad3 activation induced by TGF-beta1.|Inhibition of Src not only decreases Smad3 phosphorylation but also decreases phosphorylation dependent nuclear translocation of Smad2/3, suggesting that Src kinase could modulate Smad3 activity.
|
SIGNOR-279292
|
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