IdA
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| IdB
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| mechanism
stringclasses 40
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stringclasses 10
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14
|
|---|---|---|---|---|---|---|---|
P50148
|
Q92847
| 2
|
binding
|
up-regulates activity
| 0.474
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ≥ -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ≥ -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ≥ -1.0.
|
SIGNOR-257380
|
P00519
|
Q9UPY6
| 1
|
phosphorylation
|
up-regulates activity
| 0.582
|
WAVE3-Abl interaction promotes the tyrosine phosphorylation of WAVE3 by Abl, and STI-571, a specific inhibitor of Abl kinase activity, abrogates the Abl-mediated phosphorylation of WAVE3.
|
SIGNOR-259077
|
P98170
|
Q9NR28
| 2
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.914
|
Xiap functions as ubiquitin ligase toward smac to inhibit apoptosis.
|
SIGNOR-134504
|
Q9BRV8
|
Q9UHD2
| 0
|
phosphorylation
|
down-regulates quantity
| 0.718
|
Mechanism of endogenous regulation of the type I interferon response by suppressor of I\u03baB kinase epsilon (SIKE), a novel substrate of TANK-binding kinase 1 (TBK1).|TBK1 phosphorylation of IRF3 and SIKE displayed negative cooperativity.
|
SIGNOR-280152
|
Q8NFZ4
|
Q9P2S2
| 2
|
binding
|
up-regulates activity
| 0.829
|
Pre- and postsynaptic plasma membranes are always precisely aligned, and are separated by a synaptic cleft of ~20 nm. The cleft contains an undefined proteinaceous material in the middle, and is presumably bridged by synaptic cell-adhesion molecules such as Nrxns and Nlgns that align the pre- and postsynaptic elements and mediate trans-synaptic signaling.|Nlgns bind to both alpha- and beta-Nrxns with nanomolar affinities; binding involves the sixth LNS-domain of alpha-Nrxns which corresponds to the only LNS-domain of beta-Nrxns52. The binding affinities differ characteristically between various pairs of Nlgns and Nrxns, and are controlled by alternative splicing of both Nrxns and Nlgns (Figure 1c)
|
SIGNOR-264156
|
P98177
|
P16220
| 2
|
binding
|
down-regulates activity
| 0.308
|
We provide evidence that the acetyltransferase creb-binding protein (cbp) binds foxo resulting in acetylation of foxo. This acetylation inhibits foxo transcriptional activity
|
SIGNOR-124711
|
O14920
|
P35813
| 0
|
dephosphorylation
|
down-regulates
| 0.308
|
Using a functional genomic approach, we have identified two protein serine/threonine phosphatases, ppm1a and ppm1b, as ikkbeta phosphatases. Overexpression of ppm1a or ppm1b results in dephosphorylation of ikkbeta at ser177 and ser181 and termination of ikkbeta-induced nf-kappab activation
|
SIGNOR-181659
|
P36956
|
P49327
| 1
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.495
|
Ultimately, both the AKT and MAPK transduction pathways regulate FASN expression through the modulation of expression of sterol regulatory element-binding protein (SREBP)-1c, which binds to regulatory elements in the FASN promoter. Proto-oncogene FBI-1 (Pokemon), a transcription factor of the bric--brac tramtrack broad complex/pox viruses and zinc fingers (BTB/POZ) domain family, interacts directly with SREBP-1c through its DNA-binding domain to synergistically activate the transcription of FASN
|
SIGNOR-242884
|
Q9NZP8
|
P00738
| 1
|
cleavage
|
up-regulates activity
| 0.375
|
We demonstrate that coexpression of the proform of Hp (proHp) and C1r-LP in COS-1 cells effected cleavage of proHp in the endoplasmic reticulum. This cleavage depended on proteolytic activity of C1r-LP because mutation of the putative active-site Ser residue abolished the reaction. Furthermore, incubation of affinity-purified C1r-LP and proHp led to the cleavage of the latter protein. ProHp appeared to be cleaved at the expected site because substitution of Gly for Arg-161 blocked the reaction.
|
SIGNOR-256358
|
P31749
|
P84243
| 1
|
phosphorylation
|
down-regulates activity
| 0.2
|
Additionally, active akt1 kinase strongly phosphorylates histone h3 at serine 10 in vitro
|
SIGNOR-98285
|
O14793
|
Q13705
| 2
|
binding
|
up-regulates activity
| 0.642
|
The purified C-terminal myostatin dimer was capable of binding the activin type II receptors, Act RIIB and, to a lesser extent, Act RIIA
|
SIGNOR-235153
|
P04637
|
P45984
| 0
|
phosphorylation
|
up-regulates
| 0.747
|
These findings strongly suggest that jnks are the major direct signaling mediators of uvb-induced p53 phosphorylation at serine 20. furthermore, phosphorylation of p53 at serine 20 by uvb-activated jnks and uvb-induced p53-dependent transcriptional activity were suppressed in jnk1 or jnk2 knockout (jnk1(-/-) or jnk2(-/-)) cells.
|
SIGNOR-115835
|
Q07820
|
P49840
| 0
|
phosphorylation
|
down-regulates quantity by destabilization
| 0.457
|
MCL-1 was phosphorylated by GSK-3 at a conserved GSK-3 phosphorylation site (S159). Glycogen Synthase Kinase-3 Regulates Mitochondrial Outer Membrane Permeabilization and Apoptosis by Destabilization of MCL-1. threonine 163, which represents the GSK-3 priming phosphorylation in this protein
|
SIGNOR-251217
|
P00533
|
O43639
| 2
|
binding
|
up-regulates
| 0.399
|
Growth factor binding to receptor protein tyrosine kinases (r-ptks)1 induces their dimerization and trans-phosphorylation, creating docking sites for proteins containing sh2 and ptb protein interaction domains. Nck binds to the pdgf and egfr receptors (figure 3c).
|
SIGNOR-64731
|
Q05655
|
Q96C90
| 1
|
phosphorylation
|
up-regulates activity
| 0.2
|
Recombinant tagged PHI-1 was phosphorylated by protein kinase C at two sites, one a Ser and one a Thr; phosphorylation enhanced inhibitory potency 50-fold.
|
SIGNOR-265739
|
Q9BVG3
|
Q9H257
| 1
|
ubiquitination
|
up-regulates activity
| 0.51
|
Importantly, using in vitro ubiquitination assays with purified proteins, we verified that CARD9 is directly ubiquitinated by TRIM62 at residue K125; this ubiquitination is dependent on the ligase activity of TRIM62 and does not occur in CARD9 Delta11 (XREF_FIG).
|
SIGNOR-278552
|
Q14332
|
P41221
| 2
|
binding
|
down-regulates
| 0.766
|
Fz2 was also required for the wnt3a-dependent accumulation of beta-catenin, and wnt5a competed with wnt3a for binding to fz2 in vitro and in intact cells, thereby inhibiting the beta-catenin pathway.
|
SIGNOR-23441
|
Q99959
|
P15924
| 2
|
binding
|
up-regulates quantity by stabilization
| 0.787
|
In contrast to the proper membrane localization of PKP2 and DSP after cotransfection of both WT proteins, mutant PKP2 C796R protein was not able to interact with FLAG-DSP to enable assembly at the junctional plaque, indicating the requirement of functional PKP2 for DSP integration into the desmosome.
|
SIGNOR-261254
|
P03951
|
P01008
| 0
|
cleavage
|
down-regulates activity
| 0.657
|
Antithrombin (AT), a member of the serine protease inhibitor (SERPIN) superfamily, is a major circulating inhibitor of blood coagulation proteases such as factor (F) IIa (known as thrombin), FXa and, to a lesser extent, FIXa, FXIa and FXIIa. SERPINC1, which encodes AT in humans, is located on chromosome 1q25.1
|
SIGNOR-264137
|
O00418
|
P23443
| 0
|
phosphorylation
|
down-regulates activity
| 0.736
|
We show that two such kinases, p70 s6 kinase (regulated via mtor) and p90(rsk1) (activated by erk), phosphorylate eef2k at a conserved serine and inhibit its activity
|
SIGNOR-109712
|
P60484
|
P53350
| 0
|
phosphorylation
|
down-regulates activity
| 0.534
|
Subsequently, Plk1 phosphorylation of PTEN was shown to be responsible for its inactivation.
|
SIGNOR-280070
|
P04637
|
Q13131
| 0
|
phosphorylation
|
up-regulates
| 0.48
|
Ampk activation induces phosphorylation of p53 on serine 15, and this phosphorylation is required to initiate ampk-dependent cell-cycle arrest
|
SIGNOR-135960
|
P08243
|
P08047
| 0
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.2
|
Sp1 and Sp3 Activate Transcription Driven by the AS Promoter
|
SIGNOR-268019
|
P33076
|
P48382
| 2
|
binding
|
up-regulates activity
| 0.759
|
RFX5 can activate transcription only in cooperation with CIITA. RFX5 and CIITA associate to form a complex capable of activating transcription from class II major histocompatibility complex promoters. In this complex, promoter specificity is determined by the DNA binding domain of RFX5 and the general transcription apparatus is recruited by the acidic activation domain of CIITA.
|
SIGNOR-240980
|
P36896
|
Q15796
| 1
|
phosphorylation
|
up-regulates activity
| 0.802
|
ActRIIB, and then partners with a type I receptor, either activin receptor-like kinase 4 (ALK4 or ActRIB) or ALK5 (T²RI), to induce phosphorylation of Smad2/Smad3 and activate a TGF-²-like signaling pathway
|
SIGNOR-235157
|
P63244
|
Q9P126
| 2
|
binding
|
down-regulates quantity by destabilization
| 0.2
|
In this study, we reported that RACK1, the receptor for activated C-kinase 1, associated with the cytoplasmic tail of CLEC-2. Moreover, overexpression of RACK1 decreased the stability of CLEC-2 through promoting its ubiquitin-proteasome degradation, without impairing surface expression and downstream signaling of CLEC-2. Taken together, these results suggest RACK1 as a novel modulator of CLEC-2 expression.Previous reports indicated that RACK1 mediated ubiquitin–proteasome degradation of HIF-1a and BimEL by recruiting Elongin-C/B ubiquitin ligase complex
|
SIGNOR-272781
|
P10644
|
Q5VU43
| 2
|
binding
|
up-regulates
| 0.315
|
Mmgl acts as a dual-specific akap by anchoring pka regulatory isoforms r1a and r2a.
|
SIGNOR-173769
|
P11831
|
P54821
| 2
|
binding
|
up-regulates
| 0.442
|
The human homeodomain proteinphox1interacts functionally with serum response factor (srf) to impart serum responsive transcriptional activity to srf-binding sites in a hela cell cotransfection assay.
|
SIGNOR-52657
|
P31749
|
P14598
| 1
|
phosphorylation
|
up-regulates
| 0.559
|
Akt phosphorylates p47phox and mediates respiratory burst activity in human neutrophils. A direct interaction between p47(phox) and akt was shown. Active recombinant akt phosphorylated recombinant p47(phox) in vitro. Mutation analysis indicated that 2 aa residues, ser(304) and ser(328), were phosphorylated by akt. Inhibition of akt activity also inhibited fmlp-stimulated neutrophil chemotaxis.
|
SIGNOR-252586
|
Q06187
|
P50148
| 2
|
binding
|
up-regulates activity
| 0.35
|
AlF− 4-activated Gaq-GDP increased Btk activity as expected, whereas AlF− 4 alone had no stimulatory effect (Table 1), so we conclude that Gaq directly stimulates Btk kinase activity
|
SIGNOR-278083
|
O43516
|
O00401
| 2
|
binding
|
up-regulates activity
| 0.933
|
Recruitment of N-WASP to vaccinia is mediated by WASP-interacting protein (WIP), whereas in Shigella WIP is recruited by N-WASP. Our observations show that vaccinia and Shigella activate the Arp2/3 complex to achieve actin-based motility, by mimicking either the SH2/SH3-containing adaptor or Cdc42 signalling pathways to recruit the N-WASP-WIP complex.
|
SIGNOR-261880
|
P35222
|
P31749
| 0
|
phosphorylation
|
up-regulates
| 0.805
|
Phosphorylation of beta-catenin by akt promotes beta-catenin transcriptional activity|we have demonstrated that akt phosphorylates beta-catenin at ser552 in vitro and in vivo.
|
SIGNOR-252499
|
Q96PH1
|
P17252
| 0
|
phosphorylation
|
up-regulates
| 0.2
|
A constitutively active form of pkc? Robustly increased basal and pma-stimulated nox5 activity and promoted the phosphorylation of nox5 on ser490, thr494, and ser498.
|
SIGNOR-204550
|
Q13002
|
P17612
| 0
|
phosphorylation
|
up-regulates activity
| 0.2
|
GluR6 glutamate receptor, transiently expressed in mammalian cells, is directly phosphorylated by PKA, and that intracellularly applied PKA increases the amplitude of the glutamate response. Site-specific mutagenesis of the serine residue (Ser 684) representing a PKA consensus site completely eliminates PKA-mediated phosphorylation of this site as well as the potentiation of the glutamate response.
|
SIGNOR-250315
|
Q16539
|
P78536
| 1
|
phosphorylation
|
up-regulates activity
| 0.405
|
We show that p38 MAP kinase, which is activated in response to inflammatory or stress signals, directly activates TACE, a membrane-associated metalloprotease that is also known as ADAM17 and effects shedding in response to growth factors and Erk MAP kinase activation. p38alpha MAP kinase interacts with the cytoplasmic domain of TACE and phosphorylates it on Thr(735), which is required for TACE-mediated ectodomain shedding
|
SIGNOR-163970
|
Q13105
|
Q7Z6Z7
| 0
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.327
|
Previously, we reported that K48 linked polyubiquitination of Miz1 by Mule triggers its proteasomal degradation, thereby relieving Miz1 suppression on TNF induced JNK activation and apoptosis.
|
SIGNOR-278697
|
P35813
|
P50750
| 1
|
dephosphorylation
|
down-regulates activity
| 0.493
|
Taken together, our data indicate that PPM1A and to some extent PPM1B are important negative regulators of P-TEFb function
|
SIGNOR-248490
|
P42702
|
P26441
| 2
|
binding
|
up-regulates
| 0.742
|
Ciliary neurotrophic factor (cntf) is a cytokine supporting the differentiation and survival of various cell types in the peripheral and central nervous systems. Its receptor complex consists of a non-signaling alpha chain, cntfr, and two signaling beta chains, gp130 and the leukemia inhibitory factor receptor (lifr)
|
SIGNOR-81382
|
P55273
|
P24941
| 0
|
phosphorylation
|
up-regulates
| 0.526
|
Cdk2 and pka were found to participate in p19ink4d phosphorylation process and that they would mediate serine 76 and threonine 141 modifications respectively. Nuclear translocation of p19ink4d induced by dna damage was shown to be dependent on serine 76 phosphorylation.
|
SIGNOR-197270
|
O95155
|
Q99689
| 1
|
polyubiquitination
|
up-regulates activity
| 0.391
|
E4B mediated the polyubiquitylation of FEZ1 but did not affect its intracellular stability, suggesting that such modification of FEZ1 is not a signal for its proteolysis. Polyubiquitylation of FEZ1 by E4B required Lys(27) of ubiquitin. Expression of a dominant-negative mutant of E4B in rat pheochromocytoma PC12 cells resulted in inhibition of neurite extension induced either by nerve growth factor or by coexpression of FEZ1 and constitutively active PKCzeta. These findings indicate that E4B serves as a ubiquitin ligase for FEZ1 and thereby regulates its function but not its degradation. The polyubiquitin chain attached by E4B to FEZ1 might therefore facilitate the interaction of FEZ1 with an unidentified target that functions in neuritogenesis.
|
SIGNOR-271510
|
O14920
|
Q92574
| 1
|
phosphorylation
|
down-regulates
| 0.642
|
Here we show that ikkbeta, a major downstream kinase in the tnfalpha signaling pathway, physically interacts with and phosphorylates tsc1 at ser487 and ser511, resulting in suppression of tsc1phosphorylation of tsc2 (by akt and erk;refs. 28, 29) and tsc1(by ikkbeta;ref. 30) results in the disruption of the tsc1/2 complex, and thereby activates the oncogenic mtor signaling contributing to tumor progression.
|
SIGNOR-157296
|
Q92585
|
P62805
| 1
|
acetylation
|
down-regulates activity
| 0.2
|
We speculated that maml1, in addition to recruiting p300, might directly interact with histones to facilitate histone acetylation. We had observed acetylation of the histones h3 and h4.
|
SIGNOR-153041
|
Q9UDY2
|
Q9GZV5
| 2
|
binding
|
down-regulates
| 0.507
|
In addition, yap and taz interact with another tight junction protein zo-2, which was reported to increase nuclear localization of yap and tight-junction localization of taz.
|
SIGNOR-175931
|
Q00987
|
P49137
| 0
|
phosphorylation
|
up-regulates quantity by stabilization
| 0.364
|
Hdm2 phosphorylation by mapkap kinase 2 enhances hdm2 activity and promote the degradation of p53.
|
SIGNOR-133560
|
P84243
|
P83916
| 2
|
binding
|
up-regulates activity
| 0.2
|
A core characteristic of heterochromatin is its association with heterochromatin protein 1 (HP1) proteins, a highly conserved family of chromosomal proteins that bind to di- and trimethylated H3K9 via a conserved N-terminal domain called the chromodomain (CD) HP1 proteins are a highly conserved family of eukaryotic proteins that bind to methylated histone H3 lysine 9 (H3K9) and are required for heterochromatic gene silencing.
|
SIGNOR-264491
|
Q86UR5
|
A6NNM3
| 2
|
binding
|
down-regulates activity
| 0.345
|
SH3 domains of RBPs interact with RIMs. The enhancement of depolarization-induced secretion in PC12 cells by fusion proteins that suppress the associations of RBPs with RIMs and α1 suggests that RBPs may repress RIMs, either directly or through associated proteins.
|
SIGNOR-264364
|
P17612
|
O96004
| 1
|
phosphorylation
|
down-regulates activity
| 0.296
|
In vitro and in vivo phosphorylation studies show that both PKA and PKC can phosphorylate HAND1 and -2. T107; S109 within helix I and S98 within the basic domain, are the phosphorylated residues. We determined that modification of HAND1 at residues 107 and 109 affects dimerization affinities with E-proteins, thus changing the bHLH dimer equilibrium within the cell. These modifications also affect HAND1 function.
|
SIGNOR-249991
|
Q07812
|
O15297
| 0
|
dephosphorylation
|
down-regulates activity
| 0.2
|
34 In this study, a novel function of Wip1 was identified, that is, its ability to dephosphorylate directly and thus inactivate apoptotic BAX protein in response to gamma irradiation.|To ascertain whether Wip1 dephosphorylates BAX, recombinant Wip1 was incubated with previously reported BAX-derived phosphopeptides containing Ser87, Ser163, Thr167, and Ser184 in an in vitro phosphatase assay. xref , xref Peptides containing phospho-Thr180 from p38 MAPK and phospho-Thr31 from UNG2 were used as a positive and negative control, respectively. xref As shown in xref , purified Wip1 did not dephosphorylate the four BAX-derived phosphopeptides.
|
SIGNOR-276993
|
Q9UJU2
|
P19883
| 1
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.28
|
We further demonstrate that Fst is a direct target of the WNT/β-catenin pathway. Activation and inactivation of β-catenin induced and inhibited Fst expression, respectively, in both C2C12 cells and mouse embryos. Specific TCF/LEF1 binding sites within the promoter and intron 1 region of the Fst gene were required for RSPO2 and WNT/β-catenin-induced Fst expression.
|
SIGNOR-251722
|
P04626
|
Q05209
| 0
|
dephosphorylation
|
down-regulates activity
| 0.619
|
In MDA-MB-231 cells, a human triple negative breast cancer cell line, phosphorylation of PTPN12 on Ser 19 was increased in response to cyclin dependent kinase 2 (CDK2), and this impaired PTPN12 's ability to dephosphorylate HER2 on Y1196.|PTPN12 negatively regulates Her2, by dephosphorylation on Tyr 1196 on Her2.
|
SIGNOR-277038
|
Q13114
|
P29350
| 0
|
dephosphorylation
|
down-regulates activity
| 0.2
|
We identified a direct interaction between SHP‐1 and TRAF3; the association between these two proteins resulted in diminished recruitment of CK1ε to TRAF3 and inhibited its K63‐linked ubiquitination; SHP‐1 inhibited K63‐linked ubiquitination of TRAF3 by promoting dephosphorylation at Tyr116 and Tyr446.
|
SIGNOR-277527
|
Q8NFG4
|
Q9HB90
| 1
|
gtpase-activating protein
|
up-regulates activity
| 0.695
|
The folliculin tumor suppressor is a GAP for the RagC/D GTPases that signal amino acid levels to mTORC1 [..} RagC/D is a key regulator of the interaction of mTORC1 with the Rag heterodimer and that, unexpectedly, RagC/D must be GDP-bound for the interaction to occur
|
SIGNOR-256503
|
P17612
|
O14921
| 1
|
phosphorylation
|
up-regulates quantity by stabilization
| 0.334
|
Phosphorylation of RGS13 by the cyclic AMP-dependent protein kinase inhibits RGS13 degradation.we show that PKA activation also leads to increased steady-state RGS13 expression through RGS13 phosphorylation, which inhibits RGS13 protein degradation. RGS13 phosphorylation was diminished by mutation of an N-terminal Thr residue (T41) identified as a phosphorylation site by mass spectrometry.
|
SIGNOR-259835
|
Q01892
|
P19784
| 0
|
phosphorylation
|
down-regulates quantity by destabilization
| 0.307
|
Phosphorylation of the Spi-B transcription factor reduces its intrinsic stability. | Serine residues 37 in the transactivation domain and 129, 144 and 146 in the PEST domain of Spi-B are phosphorylated by CKII in vitro | The CKII phosphorylation sites mapped in vitro are phosphorylated in vivo
|
SIGNOR-251042
|
Q08211
|
Q99836
| 2
|
binding
|
up-regulates activity
| 0.491
|
We further showed that both DHX9 and DHX36 are localized within the cytosol and are directly bound to the Toll-interleukin receptor domain of MyD88 via their helicase-associated domain 2 and DUF domains. This study demonstrates that DHX9/DHX36 represent the MyD88-dependent DNA sensors in the cytosol of pDCs and suggests a much broader role for DHX helicases in viral sensing.
|
SIGNOR-260955
|
P52333
|
P08575
| 0
|
dephosphorylation
|
down-regulates activity
| 0.456
|
CD45 is a JAK phosphatase and negatively regulates cytokine receptor signalling
|
SIGNOR-248359
|
Q96KS0
|
P17252
| 0
|
phosphorylation
|
down-regulates
| 0.364
|
Thus, recombinant phd1 was examined for in vitro phosphorylation using protein kinase a, protein kinase calpha, casein kinase i and ii and erk2. The protein was most strongly phosphorylated by protein kinase calpha, and the phosphorylation sites were found to be ser-132, ser-226 and ser-234.Mutation Of ser-132 or ser-234 to asp or glu diminished the enzymatic activity to 25-60%, while mutation of ser-226 scarcely influenced the activity.
|
SIGNOR-180203
|
Q7Z434
|
Q14258
| 0
|
polyubiquitination
|
down-regulates quantity by destabilization
| 0.77
|
We report here that RLR activation triggers MAVS ubiquitination on lysine 7 and 10 by the E3 ubiquitin ligase TRIM25 and marks it for proteasomal degradation concomitantly with downstream signaling.
|
SIGNOR-272042
|
P42680
|
Q06187
| 2
|
phosphorylation
|
down-regulates activity
| 0.496
|
Tec family protein tyrosine kinases (TFKs) play a central role in hematopoietic cellular signaling. Initial activation takes place through specific tyrosine phosphorylation situated in the activation loop. Further activation occurs within the SH3 domain via a transphosphorylation mechanism, which for Bruton's tyrosine kinase (Btk) affects tyrosine 223.|In Btk, the SH3 domain mutation Y223F results in enhanced fibroblast transformation, implying that the SH3 domain may play a negative regulatory role
|
SIGNOR-246652
|
Q9ULJ6
|
P10275
| 2
|
binding
|
up-regulates activity
| 0.709
|
Our results demonstrate that hZimp10 is a novel AR interacting protein that augments AR-mediated transcription. Moreover, hZimp10 co-localized with AR and SUMO-1 at replication foci throughout S phase, and it was capable of enhancing sumoylation of AR in vivo.
|
SIGNOR-263935
|
P07197
|
Q9HCK8
| 0
|
transcriptional regulation
|
down-regulates quantity
| 0.2
|
Many of the most significantly up-regulated genes in Chd8+/− and Chd8−/− NPCs are involved in later stages of neuronal development, including Ascl1 [a central driver of neural reprogramming (29)], Dcx, Map2, Nefm, Neurod4, and Neurog1 (Fig. 2 E and F). Additionally, we found that Sox3 is derepressed in both Chd8+/− and Chd8−/− NPCs, and several other Sox TF members (Sox2, Sox7, and Sox11) became derepressed in the Chd8−/− cells
|
SIGNOR-268917
|
O95150
|
Q93038
| 2
|
binding
|
up-regulates
| 0.776
|
The ligand of dr3 is tl1a
|
SIGNOR-103078
|
O75914
|
Q05682
| 1
|
phosphorylation
|
down-regulates
| 0.2
|
We investigated the effects of phosphorylation by p(21)-activated kinase 3 (pak) and calmodulin on the 22 kda c-terminal fragment of caldesmon (cad22). We substituted the major pak sites, ser-672 and ser-702, with either alanine or aspartic acid to mimic nonphosphorylated and constitutively phosphorylated states of caldesmon, respectively. Phosphorylation at these sites weakened ca(2+)-calmodulin binding further and reduced the inhibitory activity of cad22 in the absence of ca(2+)-calmodulin.
|
SIGNOR-167976
|
P49683
|
Q14344
| 2
|
binding
|
up-regulates activity
| 0.264
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ≥ -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ≥ -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ≥ -1.0.
|
SIGNOR-257280
|
O60260
|
Q13002
| 1
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.2
|
Parkin interacts with and ubiquitinates the GluK2 KAR subunit and regulates GluK2 levels and KAR currents.|The loss of parkin function increases surface and total GluK2 levels, and consistently increases KAR currents.
|
SIGNOR-278541
|
P10912
|
P43378
| 0
|
dephosphorylation
|
down-regulates activity
| 0.314
|
Protein tyrosine phosphatases (PTPs) play key roles in switching off tyrosine phosphorylation cascades, such as initiated by cytokine receptors. We have used substrate-trapping mutants of a large set of PTPs to identify members of the PTP family that have substrate specificity for the phosphorylated human GH receptor (GHR) intracellular domain. Among 31 PTPs tested, T cell (TC)-PTP, PTP-beta, PTP1B, stomach cancer-associated PTP 1 (SAP-1), Pyst-2, Meg-2, and PTP-H1 showed specificity for phosphorylated GHR
|
SIGNOR-248505
|
Q12888
|
Q9Y468
| 2
|
binding
|
down-regulates activity
| 0.404
|
L3MBTL1, a tumor suppressor with high affinity for H4K20me2, can block 53BP1 binding at DSBs
|
SIGNOR-262059
|
P53350
|
P47736
| 1
|
phosphorylation
|
down-regulates
| 0.452
|
Plk1 phosphorylates ser525 in conserved 524dsghvs529 degron of rap1gap and promotes its interaction with _-trcp. Together, these results further support a model in which plk1, but not cdk1 or gsk-3_-mediated phosphorylation of rap1gap is a prerequisite for mitotic degradation.
|
SIGNOR-205577
|
Q7L5N7
|
P49137
| 0
|
phosphorylation
|
up-regulates activity
| 0.2
|
Mass spectrometry and mutagenesis analyses identified Ser34 of LPCAT2 as the phosphorylation site to enhance the catalytic activities. The experiments using inhibitors and siRNA against MAPK cascades demonstrated that LPCAT2 phosphorylation through LPS-TLR4 signaling may directly depend on MAPK-activated protein kinase 2 (MAPKAP kinase 2 or MK2).
|
SIGNOR-263077
|
P68400
|
P30622
| 1
|
phosphorylation
|
up-regulates
| 0.293
|
Herein, we have identified polo-like kinase 1 (plk1) and casein kinase 2 (ck2) as two kinases of clip-170 and mapped s195 and s1318 as their respective phosphorylation sites.Plk1- and ck2-associated phosphorylations of clip-170 are involved in the timely formation of kinetochore-microtubule attachments in mitosis
|
SIGNOR-167168
|
Q9P286
|
Q9P286
| 2
|
phosphorylation
|
up-regulates activity
| 0.2
|
Active form of Cdc42, but not Rac1 and Rho, protein was able to activate the purified GST-Pak5 autophosphorylation and kinase activity. Mutations of Pak5, which disrupted the interaction of Cdc42 and Pak5, also abolished the induction of autophosphorylation. The H19L/H22L mutant of Pak5 was insensitive to the Cdc42-induced autophosphorylation.
|
SIGNOR-250248
|
O95967
|
P28300
| 2
|
binding
|
up-regulates activity
| 0.561
|
Fibulin-4 directly binds LOX, and this interaction enhances fibulin-4 binding to tropoelastin, thus forming a ternary complex that may be critical for elastin cross-linking.
|
SIGNOR-252135
|
O00253
|
P41968
| 2
|
binding
|
down-regulates activity
| 0.592
|
AGRP is a potent antagonist of the melanocortin-3 receptor and the MC4R and has also been shown to have a lesser degree of inhibitory action at the melanocortin-5 receptor.
|
SIGNOR-252380
|
P68400
|
Q2V2M9
| 1
|
phosphorylation
|
down-regulates
| 0.309
|
We have identified a novel striated muscle-specific splice variant of the formin fhod3 that introduces a casein kinase 2 (ck2) phosphorylation site. The specific targeting of muscle fhod3 to the myofibrils in cardiomyocytes is abolished in phosphomutants or by the inhibition of ck2. Phosphorylation of muscle fhod3 also prevents its interaction with p62/sequestosome 1 and its recruitment to autophagosomes.
|
SIGNOR-170525
|
P62136
|
P28482
| 1
|
dephosphorylation
|
down-regulates
| 0.446
|
P-erk1/2 proteins were efficiently dephosphorylated in vitro by protein phosphatases 1 and 2a (pp1/2a) and mapk phosphatase 3 (mkp3)
|
SIGNOR-103152
|
P62714
|
P01106
| 1
|
dephosphorylation
|
down-regulates
| 0.276
|
Phosphorylation at ser-62 by pro-directed kinases (p-k) is a prerequisite for gsk3-dependent phosphorylation of thr-58. This triggers binding of pin1, subsequently protein phosphatase 2a (pp2a)-dependent dephosphorylation of ser-62, and then recruitment of scf-fbw7 to the thr-58-phosphorylated myc. Scf-fbw7 polyubiquitinylates myc (branching through lys-48), leading to its proteasomal degradation.
|
SIGNOR-149726
|
Q99814
|
P27361
| 0
|
phosphorylation
|
up-regulates quantity by stabilization
| 0.26
|
The activation of ERK1/2 upon hypoxia promoted HIF-2alpha phosphorylation, enhancing its interaction with USP33.Here, we identified USP33 as essential deubiquitinase that stabilizes HIF-2alpha protein in an ERK1/2-dependent manner to promote hypoxia response in cancer cells.
|
SIGNOR-277584
|
P18031
|
O15344
| 0
|
ubiquitination
|
down-regulates quantity
| 0.2
|
Proteasome inhibitor treatment diminished the decrease of PTP1B (Figure 5F) caused by TRIM18 overexpression.|TRIM18 Interacts With PTP1B and Promotes PTP1B Ubiquitination.
|
SIGNOR-278703
|
Q96EB6
|
Q96EP1
| 0
|
ubiquitination
|
down-regulates quantity
| 0.372
|
CHFR binds to and ubiquitylates SIRT1, leading to its proteasomal degradation.|CHFR ubiquitylates and promotes the proteasomal degradation of SIRT1.
|
SIGNOR-278691
|
O43542
|
Q13535
| 0
|
phosphorylation
|
up-regulates activity
| 0.464
|
HXRCC3 S225 phosphorylation is mediated by ATR via an ATM-dependent signaling pathway. These data clearly indicate that ATR mediates the late activation of XRCC3 following DSB accumulation.
|
SIGNOR-262666
|
Q08828
|
P04899
| 2
|
binding
|
down-regulates activity
| 0.597
|
Adenylate cyclase is regulated by stimulatory hormones through Gs(alpha s beta gamma) and inhibitory hormones through Gi(alpha i beta gamma)
|
SIGNOR-256499
|
Q9P2B4
|
O43815
| 2
|
binding
|
up-regulates activity
| 0.645
|
Although CTTNBP2 and CTTNBP2NL are different in terms of tissue and subcellular distribution, our data indicate that, similar to CTTNBP2NL, CTTNBP2 associates with members of the striatin family, namely striatin and zinedin. Moreover, CTTNBP2 is critical for the distribution of striatin and zinedin in dendritic spines. The role of CTTNBP2 in the regulation of the synaptic distribution of striatin and zinedin suggests that CTTNBP2 regulates synaptic signaling through PP2A.
|
SIGNOR-261702
|
P68400
|
P30291
| 1
|
phosphorylation
|
down-regulates quantity by destabilization
| 0.408
|
In the present study, we show that phosphorylation of S123 (pS123) by CDK promoted the binding of Wee1A to beta-TrCP through three independent mechanisms. S123 phosphorylation creates a PBD-binding motif and accelerates S53 phosphorylation by Plk1.
|
SIGNOR-276038
|
P17612
|
Q86UR1
| 1
|
phosphorylation
|
down-regulates
| 0.324
|
We identified ser-282 as target of mapk and ser-172 as target of pkc and pka in vitro and in a transfected human embryonic kidney 293 (hek293) cell model using site directed mutagenesis and phosphopeptide mapping analysis. In hek293 cells, phosphorylation of these sites occurred at a basal level and down-regulated constitutive nox1 activity. I
|
SIGNOR-163663
|
P04637
|
Q92585
| 2
|
binding
|
up-regulates
| 0.31
|
Unexpectedly, however, emerging evidence implicate maml proteins as exciting key transcriptional co-activators in other signal transduction pathways including: muscle differentiation and myopathies (mef2c), tumor suppressor pathway (p53) and colon carcinoma survival (beta-catenin).
|
SIGNOR-180136
|
O15534
|
P48729
| 0
|
phosphorylation
|
down-regulates quantity by destabilization
| 0.318
|
CKI\u03b1-Dependent Phosphorylation and Degradation of PER1.
|
SIGNOR-279700
|
P05129
|
Q7Z2E3
| 1
|
phosphorylation
|
up-regulates
| 0.32
|
We show the novel molecular consequences of increased kinase activities of mutants: aprataxin (aptx), a dna repair protein causative for autosomal recessive ataxia, was found to be a preferential substrate of mutant pkc gamma, and phosphorylation inhibited its nuclear entry. ollectively, phosphorylation occurred at thr111, reducing nuclear aptx.
|
SIGNOR-186409
|
Q00535
|
P10636
| 1
|
phosphorylation
|
down-regulates activity
| 0.763
|
We found that cdk5 phosphorylated tau(441) at Thr-181, Ser-199, Ser-202, Thr-205, Thr-212, Ser-214, Thr-217, Thr-231, Ser-235, Ser-396, and Ser-404, but not at Ser-262, Ser-400, Thr-403, Ser-409, Ser-413, or Ser-422. GSK-3beta phosphorylated all the cdk5-catalyzed sites above except Ser-235.
|
SIGNOR-249321
|
P07948
|
Q8N6F7
| 1
|
phosphorylation
|
up-regulates activity
| 0.245
|
Herein, we demonstrate phosphorylation of HGAL by Syk and Lyn kinases at tyrosines Y80, Y86, Y106Y107, Y128, and Y148. Y148 (in black) was already phosphorylated before the addition of kinases. We demonstrate that Grb2 facilitates HGAL and Syk binding following BCR stimulation but does not affect the HGAL-mediated increase in Syk kinase activity. Previous studies showed that Grb2 inhibits BCR signaling by decreasing the activation of Syk by Lyn.11 Thus, while HGAL and Grb2 oppositely affect Syk kinase activity, this is not due to direct Grb2 effects on HGAL-mediated Syk kinase activation.
|
SIGNOR-273560
|
P24752
|
Q9P0J1
| 1
|
acetylation
|
down-regulates activity
| 0.34
|
We previously reported that the mitochondrial fraction of FLT3 activates acetyl-CoA acetyltransferase ACAT1 in mitochondria via Y407 phosphorylation to acetylate and inhibit mitochondrial pyruvate dehydrogenase A (PDHA) and PDH phosphatase 1 (PDP1)
|
SIGNOR-267635
|
P04150
|
P05412
| 1
|
transcriptional regulation
|
down-regulates quantity by repression
| 0.743
|
We have described how the receptor uses several means to achieve repression of the genes regulated by AP-1 and NF-KB proteins
|
SIGNOR-251679
|
Q9P2S2
|
Q8NFZ4
| 2
|
binding
|
up-regulates activity
| 0.829
|
The neurexin–NL2 interaction is sufficient to induce GABAergic differentiation and clustering of GABAARs at postsynaptic sites
|
SIGNOR-265454
|
Q99801
|
Q13315
| 0
|
phosphorylation
|
down-regulates quantity by destabilization
| 0.362
|
ATM phosphorylates NKX3.1 on T166 and then T134, resulting in NKX3.1 ubiquitination and degradation resulting from an apparent regulatory interaction.
|
SIGNOR-276499
|
P08631
|
P40763
| 1
|
phosphorylation
|
up-regulates activity
| 0.618
|
Activation of STAT3 by the Src family kinase Hck requires a functional SH3 domain. Direct Phosphorylation of STAT3 on Tyr-705 by Src Family Kinases
|
SIGNOR-251267
|
Q5TEC6
|
Q9UIF8
| 2
|
binding
|
down-regulates activity
| 0.2
|
The BAZ2B bromodomain has been shown to bind to acetylated H3K14 (H3K14ac), whose presence at promoter regions is generally associated with gene activation. This suggests a potential role for BAZ2B in transcriptional activation.
|
SIGNOR-266618
|
Q6P5Z2
|
P56945
| 2
|
binding
|
up-regulates activity
| 0.2
|
Taken together, the data suggest that p130Cas expression induces PKN3 activation and this activation is independent of p130Cas–PKN3 interaction.
|
SIGNOR-264573
|
P05546
|
P08311
| 0
|
cleavage
|
down-regulates activity
| 0.444
|
Amino acid sequence analysis led to the conclusion that both neutrophil elastase and cathepsin G cleave HC at Ile66, which does not affect HC activity, and at Val439, near the reactive site Leu444, which inactivates HC.
|
SIGNOR-256509
|
P04637
|
P11413
| 2
|
binding
|
down-regulates activity
| 0.583
|
The p53 protein binds to glucose-6-phosphate dehydrogenase (G6PD), the first and rate-limiting enzyme of the PPP, and prevents the formation of the active dimer.
|
SIGNOR-267468
|
P06239
|
P04150
| 2
|
binding
|
up-regulates
| 0.355
|
The present study shows that the GC receptor is part of a TCR-linked multiprotein complex containing heat-shock protein (HSP)90, LCK and FYN, which is essential for TCR-dependent LCK/FYN activation.
|
SIGNOR-251685
|
P53350
|
P06493
| 2
|
binding
|
up-regulates activity
| 0.611
|
Moreover, CDK1 phosphorylates RSF1 at Ser1375, and this phosphorylation is necessary for PLK1 recruitment. Subsequently, PLK1 phosphorylates RSF1 at Ser1359, stabilizing PLK1 deposition.
|
SIGNOR-273589
|
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