IdA
stringlengths 6
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| IdB
stringlengths 6
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int64 0
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| mechanism
stringclasses 40
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stringclasses 10
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float64 0.1
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stringlengths 10
1.63k
⌀ | signor_id
stringlengths 12
14
|
|---|---|---|---|---|---|---|---|
O00418
|
P0DP24
| 2
|
binding
|
up-regulates
| 0.461
|
The calmodulin-binding region is located between amino acids 51 and 96
|
SIGNOR-266321
|
Q14344
|
O95835
| 1
|
phosphorylation
|
down-regulates activity
| 0.2
|
These findings suggest that Galpha13 induced phosphorilation of LATS1 at S909 recruits ITCH to trigger LATS1 degradation, leading to EMT-related phenotypes
|
SIGNOR-278051
|
Q5TGU0
|
P12235
| 2
|
binding
|
up-regulates activity
| 0.277
|
Our results demonstrate the existence of a VDAC-TSPO2-ANT complex that mediates ATP release from RBCs. We previously demonstrated that the translocase protein TSPO2 together with the voltage-dependent anion channel (VDAC) and adenine nucleotide transporter (ANT) were involved in a membrane transport complex in human red blood cells (RBCs). . The present results show that TSPO ligands induce polymerization of VDAC, coupled to activation of ATP release by a supramolecular complex involving VDAC, TSPO2 and ANT.
|
SIGNOR-261825
|
Q96Q27
|
P27361
| 0
|
phosphorylation
|
up-regulates activity
| 0.265
|
Indeed, using mass spectrometry, we showed for the first time that ASB2a is phosphorylated and that phosphorylation of serine-323 (Ser-323) of ASB2a is crucial for the targeting of the actin-binding protein filamin A (FLNa) to degradation. |Moreover, inhibition of the extracellular signal-regulated kinases 1 and 2 (Erk1/2) activity reduced ASB2a-mediated FLNa degradation.
|
SIGNOR-272241
|
Q15831
|
O60285
| 1
|
phosphorylation
|
up-regulates
| 0.546
|
A total of 12 human kinases (nuak1, nuak2, brsk1, brsk2, qik, qsk, sik, mark1, mark2, mark3, mark4 and melk) are related to ampk. Here we demonstrate that lkb1 can phosphorylate the t-loop of all the members of this subfamily, apart from melk, increasing their activity >50-fold.
|
SIGNOR-122686
|
O15111
|
Q99558
| 2
|
phosphorylation
|
down-regulates quantity by destabilization
| 0.698
|
Upon activation by nik, ikkalfa phosphorylates nik, triggering its proteolysis.
|
SIGNOR-165622
|
P42224
|
P07949
| 0
|
phosphorylation
|
up-regulates activity
| 0.275
|
In detail, RET and PTC3 induced STAT1 overexpression and phosphorylation at Ser 727 and Tyr 701.
|
SIGNOR-279276
|
O14920
|
P12931
| 0
|
phosphorylation
|
up-regulates
| 0.362
|
These results indicate that c-src can associate with ikkbeta and phosphorylate its tyrosine residues after tnf-alfa or tpa stimulation.
|
SIGNOR-99318
|
Q13002
|
Q6TDP4
| 2
|
binding
|
down-regulates quantity by destabilization
| 0.496
|
Here, we report that actinfilin is able to bind to GluR6, a kainate-type glutamate receptor subunit, and target GluR6 for degradation. Like many members of its protein family, actinfilin acts as a substrate adaptor, binding Cullin 3 (Cul3) and linking GluR6 to the E3 ubiquitin-ligase complex. Together our data demonstrate that actinfilin acts as a scaffold, linking GluR6 to the Cul3 ubiquitin ligase to provide a novel mechanism for kainate receptor degradation.
|
SIGNOR-271612
|
Q05655
|
O76090
| 1
|
phosphorylation
|
down-regulates activity
| 0.2
|
We have identified a PKC phosphorylation site (S358) located in the C terminal region of hBest1 critical for channel rundown. Phosphorylation of this site by PKC activators and PP2A inhibitors reduces channel rundown.
|
SIGNOR-260880
|
P20226
|
Q7Z6Z7
| 0
|
ubiquitination
|
down-regulates quantity
| 0.337
|
Having established that Huwe1 mediates TBP ubiquitination in vitro, we then asked which E2 conjugating enzymes work best with Huwe1 in this reaction.|Upregulation of Huwe1 expression during myogenesis induces TBP degradation and myotube differentiation.
|
SIGNOR-278696
|
Q9H204
|
P06239
| 0
|
phosphorylation
|
up-regulates
| 0.439
|
Y64 of magicin is phosphorylated by lck creating a sh2-grb2 binding motif
|
SIGNOR-148704
|
Q15208
|
P38936
| 1
|
phosphorylation
|
down-regulates quantity by destabilization
| 0.2
|
More importantly, with the direct regulation of p21 stability by phosphorylation on Ser 146, we define here the first downstream signaling mechanisms by which NDR kinases can control G1/S progression.|NDR kinases regulate p21 stability by phosphorylation of S146 on p21. |
|
SIGNOR-272961
|
P04049
|
Q92934
| 1
|
phosphorylation
|
down-regulates
| 0.66
|
The activation of several major anti-apoptotic signaling pathways correlates with an increase in the phosphorylation of bad on ser-112, ser-136, and ser-155. These phosphorylation events result in bad inactivation through sequestration by 14-3-3 proteins
|
SIGNOR-155293
|
P38936
|
Q16539
| 0
|
phosphorylation
|
up-regulates quantity by stabilization
| 0.445
|
The stress-activated protein kinases p38 alpha and jnk1 stabilize p21(cip1) by phosphorylation.|p38 alpha and JNK1 phosphorylated p21 in vivo, and both p38 alpha and JNK1 phosphorylated p21 at Ser(130) in vitro.
|
SIGNOR-89436
|
P15923
|
Q9P286
| 0
|
phosphorylation
|
up-regulates activity
| 0.2
|
The p21-activated kinase 5 (PAK5) is overexpressed in advanced cancer and the transcription factor E47 is a direct repressor of E-cadherin and inducer of epithelial-mesenchymal transition (EMT). |In this study, we found that PAK5-mediated E47 phosphorylation promoted EMT in advanced colon cancer. PAK5 interacted with E47 and phosphorylated E47 on Ser39 under hepatocyte growth factor (HGF) stimulation
|
SIGNOR-275653
|
O75581
|
Q9GZT5
| 2
|
binding
|
up-regulates
| 0.56
|
Wnt proteins bind to the frizzled receptors and lrp5/6 co-receptors, and through stabilizing the critical mediator betBeta-catenin, initiate a complex signaling cascade that plays an important role in regulating cell proliferation and differentiation.
|
SIGNOR-131622
|
P18031
|
P10912
| 1
|
dephosphorylation
|
down-regulates activity
| 0.501
|
PTPH1 only bound Tyr534, whereas PTP1B and TC-PTP bound multiple phosphopeptides. Earlier work suggests that Tyr332, Tyr487, Tyr534, Tyr566, and Tyr627 are all phosphorylated after GH stimulation (21). Apart from Tyr627, all of these also appear good PTP substrates
|
SIGNOR-248420
|
P08588
|
Q9HD26
| 0
|
relocalization
|
down-regulates
| 0.342
|
Overexpression of cal reduces surface expression of beta1ar. Interaction with cal promotes retention of beta1ar within the cell
|
SIGNOR-128791
|
P09429
|
P14651
| 2
|
binding
|
up-regulates activity
| 0.298
|
We show that HMG1 interacts with proteins encoded by the HOX gene family by establishing protein-protein contacts between the HMG box domains and the HOX homeodomain. The functional role of these interactions was studied using the transcriptional activity of the human HOXD9 protein as a model. HMG1 enhances, in a dose-dependent fashion, the sequence-specific DNA binding activity in vitro, and the transcriptional activation in a co-transfection assay in vivo, of the HOXD9 protein.
|
SIGNOR-219902
|
P27361
|
P23443
| 1
|
phosphorylation
|
up-regulates activity
| 0.607
|
Thr 421/Ser 424 have been reported to be targeted by ERK1, 2 (39), JNK or p38 MAPKs (36). Interestingly, with a comparable kinetics, FSH represses ERK1, 2 constitutive phosphorylation in Sertoli cells isolated from 19-d-old rats
|
SIGNOR-134662
|
Q14938
|
A6NFN3
| 1
|
transcriptional regulation
|
up-regulates quantity
| 0.2
|
For example, within the NFI targetome, we identified 6 collagen genes, 13 genes encoding potassium channel or glutamate receptor subunits and a range of factors related to axon guidance (e.g. Slit1, Robo1, Epha4, Epha5, Epha8)
|
SIGNOR-268913
|
Q05086
|
P55036
| 1
|
polyubiquitination
|
down-regulates quantity by destabilization
| 0.463
|
S5a/Rpn10 is a ubiquitin (Ub)-binding protein that is a subunit of the 26S proteasome but also exists free in the cytosol. It binds poly-Ub chains through its two Ub-interacting motifs (UIMs). We discovered that, unlike typical substrates of Ub ligases (E3s), S5a can be ubiquitinated by all E3s tested including multimeric and monomeric Ring finger E3s (MuRF1, Siah2, Parkin, APC, and SCF(betaTRCP1)), the U-box E3, CHIP, and HECT domain E3s (E6AP and Nedd4) when assayed with UbcH5 or related Ub-conjugating enzymes.The short half-life of S5a presumably is because of the presence of the UIM domain and reflects the ubiquitination of free S5a by many E3s. Surprisingly, the same four Lys residues on S5a, Lys-74, Lys-122, Lys-262, and Lys-365 were ubiquitinated by MuRF1 and E6AP (Fig. 10). Two additional Lys residues (Lys-126 and -135) were ubiquitinated by E6AP.
|
SIGNOR-272746
|
O00311
|
O75475
| 1
|
phosphorylation
|
up-regulates
| 0.334
|
We now report identification of the cdc7-activator of s-phase kinase (ask) heterodimer as a novel interactor of ledgf. the kinase phosphorylated ledgf in vitro, with ser-206 being the major target, and ledgf phosphorylated at this residue could be detected during s phase of the cell cycle. Ledgf potently stimulated the enzymatic activity of cdc7-ask, increasing phosphorylation of mcm2 in vitro by more than 10-fold.
|
SIGNOR-25763
|
P49841
|
Q92585
| 1
|
phosphorylation
|
down-regulates
| 0.2
|
We found that gsk3beta inhibits maml1 transcriptional activity by directly targeting the n-terminal domain of maml1
|
SIGNOR-187896
|
P28482
|
Q8N122
| 1
|
phosphorylation
|
up-regulates activity
| 0.518
|
We found three proline-directed residues within raptor, ser(8), ser(696), and ser(863), which are directly phosphorylated by erk1/2. Expression of phosphorylation-deficient alleles of raptor revealed that phosphorylation of these sites by erk1/2 normally promotes mtorc1 activity and signaling to downstream substrates, such as 4e-bp1.
|
SIGNOR-188916
|
Q9UNW8
|
P63092
| 2
|
binding
|
up-regulates activity
| 0.2
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ‚â• -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ‚â• -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ‚â• -1.0.
|
SIGNOR-256802
|
P28482
|
Q13625
| 1
|
phosphorylation
|
up-regulates activity
| 0.263
|
Hence ASPP2 can be phosphorylated at serine 827 by MAPK1 in vitro.|Phosphorylation of ASPP2 by MAPK is required for RAS-induced increased binding to p53 and increased transactivation of pro-apoptotic genes.
|
SIGNOR-264414
|
Q9NYY3
|
P04637
| 1
|
phosphorylation
|
up-regulates activity
| 0.592
|
Other investigators have demonstrated that Plk2 phosphorylates mutant p53 in a positive feedback loop.
|
SIGNOR-278980
|
P06493
|
O00311
| 1
|
phosphorylation
|
up-regulates
| 0.535
|
Hucdc7 and ask proteins can also be phosphorylated by cdks in vitro. Among four possible cdk phosphorylation sites of hucdc7, replacement of thr-376, corresponding to the activating threonine of cdk, with alanine (t376a mutant) dramatically reduces kinase activity, indicative of kinase activation by phosphorylation of this residue.
|
SIGNOR-78311
|
P38435
|
P00734
| 1
|
carboxylation
|
up-regulates activity
| 0.669
|
We analyzed the number of glutamic acid (Glu) residues and their positions in the Gla domain (GD) of DCP to investigate the gamma-carboxylation mechanism of VK-dependent carboxylase. Several DCPs were found in each subject studied. The 10 Gla residues of human prothrombin were carboxylated in order from the N-terminal (residues 26, 25, 16, 29, 20, 19, 14, 32, 7 and 6)|In the absence of VK or in the presence of VK antagonists, hepatic VKdependent carboxylase activity is inhibited and des-g-carboxyprothrombin (abnormal prothrombin or PIVKA; protein induced by vitamin K antagonist, prothrombin) is released into the blood.
|
SIGNOR-263676
|
Q9UQM7
|
P17676
| 1
|
phosphorylation
|
up-regulates activity
| 0.326
|
These studies implicate Ser276 of CIEBPP as the major in vim phosphorylation site for CaMKII. | Phosphorylation of serine at position 276 within the leucine zipper of C/EBP beta appeared to confer calcium-regulated transcriptional stimulation of a promoter that contained binding sites for C/EBP beta.
|
SIGNOR-250617
|
O14757
|
P38936
| 1
|
phosphorylation
|
down-regulates quantity by destabilization
| 0.531
|
Responsible for this degradation is the checkpoint kinase Chk1, which phosphorylates p21(Waf1) on T145 and S146 residues and induces its proteasome-dependent proteolysis.
|
SIGNOR-279325
|
O60563
|
P53350
| 0
|
phosphorylation
|
down-regulates activity
| 0.379
|
Further analysis indicated that Plk1 could phosphorylate cyclin T1 at Ser564 and inhibit the kinase activity of cyclin T1/Cdk9 complex on phosphorylation of the C-terminal domain (CTD) of RNA polymerase II.
|
SIGNOR-276501
|
Q07325
|
P49682
| 2
|
binding
|
up-regulates activity
| 0.782
|
The chemokines CXCL9, 10, and 11 exert their action via CXC chemokine receptor-3 (CXCR3), a receptor highly expressed on activated T cells.
|
SIGNOR-260970
|
Q9NQC7
|
P20749
| 1
|
deubiquitination
|
down-regulates
| 0.512
|
Cyld binds and deubiquitinates bcl-3in cyld+/+ keratinocytes, tpa or uv light triggers the translocation of cyld from the cytoplasm to the perinuclear region, where cyld binds and deubiquitinates bcl-3, thereby preventing nuclear accumulation of bcl-3 and p50/bcl-3- or p52/bcl-3-dependent proliferation.
|
SIGNOR-146774
|
Q13464
|
P19634
| 1
|
phosphorylation
|
up-regulates activity
| 0.685
|
We then engineered the T653A NHE1 mutant (ROCKA mutant), which can not be phosphorylated by p160ROCK.|p160ROCK has also been shown to activate NHE1 at threonine 653 , in close vicinity to the Akt phosphorylation site at serine 648.
|
SIGNOR-279566
|
P22681
|
Q15303
| 2
|
binding
|
up-regulates
| 0.572
|
Erbb4 might not be able to directly recruit cbl, and therefore downregulation of this receptor is slow.
|
SIGNOR-147841
|
Q92753
|
O00327
| 1
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.478
|
RORβ and RORγ are also able to induce Bmal1 activity; however, RORα4 appears the most effective in inducing this activity. The ROREs in the Bmal1 promoter also bind ROR receptors. Overexpression of RORα1 and RORα4 induces Bmal1-promoter activity by interacting with these ROREs
|
SIGNOR-266852
|
Q05397
|
P00533
| 0
|
phosphorylation
|
up-regulates
| 0.595
|
In this study, we demonstrate that growth factor receptors including hepatocyte growth factor receptor met, epidermal growth factor receptor, and platelet-derived growth factor receptor directly phosphorylate fak on tyr194 in the ferm domain collectively, this study provides the first example to explain how fak is activated by receptor tyrosine kinases.
|
SIGNOR-167646
|
Q13153
|
P51114
| 1
|
phosphorylation
|
up-regulates activity
| 0.271
|
Identification of Ser420 in FXR1 as a PAK1 Kinase Target. During zebrafish muscle development, FXR1 Ser420 phosphorylation is needed for protein function.
|
SIGNOR-273713
|
Q96EB6
|
Q02577
| 1
|
deacetylation
|
up-regulates activity
| 0.383
|
SIRT1 deacetylates the brain-specific helix-loop-helix transcription factor NHLH2 on lysine 49 to increase its activation of the MAO-A promoter
|
SIGNOR-254830
|
P17693
|
P26715
| 2
|
binding
|
up-regulates
| 0.631
|
Current models of nk cell function have supposed that the cd94/nkg2a heterodimer is interacting with an epitope common to classical hla class i
|
SIGNOR-56714
|
Q05D32
|
Q8TDR2
| 1
|
dephosphorylation
|
up-regulates quantity by stabilization
| 0.282
|
We found that peptides corresponding to phosphoserines 194 and 216 of PDIK1L (S385 and S413 of STK35) were efficiently dephosphorylated by SCP4, whereas no activity was detected for the other two phosphopeptides (Figure 6D).
|
SIGNOR-273775
|
P55316
|
P48729
| 0
|
phosphorylation
|
up-regulates
| 0.2
|
Cki phosphorylation of ser 19 of foxg1 promotes nuclear import
|
SIGNOR-154386
|
P04183
|
P06493
| 0
|
phosphorylation
|
down-regulates
| 0.507
|
Given that the dimeric form of tk1 is less active than the tetrameric, we propose that mitotic phosphorylation of serine-13 is of physiological importance, in that it may counteract atp-dependent activation of tk1 by affecting its quaternary structure, thus attenuating its enzymatic function at the g2/m phase.
|
SIGNOR-95574
|
Q14669
|
Q8IYW5
| 1
|
ubiquitination
|
down-regulates activity
| 0.465
|
Here, we show that TRIP12 and UBR5, two HECT domain ubiquitin E3 ligases, control accumulation of RNF168, a rate-limiting component of a pathway that ubiquitylates histones after DNA breakage. We find that RNF168 can be saturated by increasing amounts of DSBs. Depletion of TRIP12 and UBR5 allows accumulation of RNF168 to supraphysiological levels, followed by massive spreading of ubiquitin conjugates and hyperaccumulation of ubiquitin-regulated genome caretakers such as 53BP1 and BRCA1.
|
SIGNOR-266783
|
Q92997
|
Q969G9
| 2
|
binding
|
down-regulates
| 0.704
|
Naked (nkd)1 and nkd2 are mammalian homologs of drosophila naked cuticle, which negatively regulates canonical wnt signaling by binding dishevelled. various reports using cell culture assays indicate that nkd-mediated wnt antagonism involves dvl degradation
|
SIGNOR-167984
|
Q9BY41
|
P17612
| 0
|
phosphorylation
|
down-regulates
| 0.494
|
Negative regulation of histone deacetylase 8 activity by cyclic amp-dependent protein kinase athe pka phosphoacceptor site of hdac8 is ser(39)
|
SIGNOR-120643
|
P53355
|
Q13224
| 1
|
phosphorylation
|
up-regulates activity
| 0.497
|
DAPK1 Activation Enhances the NR1 and NR2B Channel Conductance.|Thus, an activated DAPK1 enhances NR1 and NR2B receptor channel conductance by phosphorylating NR2B subunit at Ser 1303.
|
SIGNOR-278397
|
Q9ULT6
|
Q15262
| 0
|
dephosphorylation
|
up-regulates activity
| 0.354
|
We show that PTPRK acts via the transmembrane E3 ubiquitin ligase ZNRF3, a negative regulator of Wnt signaling promoting Wnt receptor degradation, which is also expressed in the organizer.
|
SIGNOR-260110
|
Q14938
|
P41161
| 1
|
transcriptional regulation
|
down-regulates quantity
| 0.2
|
By integrating transcriptomic profiling (RNA-seq) of Nfia- and Nfix-deficient GNPs with epigenomic profiling (ChIP-seq against NFIA, NFIB and NFIX, and DNase I hypersensitivity assays), we reveal that these transcription factors share a large set of potential transcriptional targets, suggestive of complementary roles for these NFI family members in promoting neural development
|
SIGNOR-268886
|
Q8NI17
|
Q6EBC2
| 2
|
binding
|
up-regulates
| 0.648
|
Here we identify a four-helix bundle cytokine we have called interleukin 31 (il-31), which is preferentially produced by t helper type 2 cells. Il-31 signals through a receptor composed of il-31 receptor a and oncostatin m receptor.
|
SIGNOR-125313
|
P54764
|
P51692
| 1
|
phosphorylation
|
up-regulates activity
| 0.375
|
We have shown here that EphA4 can phosphorylate STAT5B, but it is not yet clear whether the nuclear translocation of phosphorylated STAT5B is enhanced by EphA4.
|
SIGNOR-278934
|
P17612
|
P04049
| 1
|
phosphorylation
|
down-regulates activity
| 0.5
|
Protein kinase A blocks Raf-1 activity by stimulating 14-3-3 binding and blocking Raf-1 interaction with Ras. Cyclic AMP (cAMP) blocks Raf-1 activation by stimulating its phosphorylation on serine 43 (Ser43), serine 233 (Ser233), and serine 259 (Ser259).
|
SIGNOR-250041
|
Q9Y297
|
P10071
| 1
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.671
|
Third, we and others have recently shown that only phosphorylated Ci/Gli3 are able to directly bind Slimb/BetaTrCP, that Gli3 is polyubiquitinated in the cell, and that mutations of 4 lysine residues, the putative ubiquitination sites in the Gli3 C-terminal region, inhibit Gli3 processing These observations further support the notion that Ci/Gli3 processing is carried out by the proteasome because the deletion of the cleavage site is expected to often disrupt the protease-mediated site-specific cleavage.
|
SIGNOR-145116
|
Q9H3D4
|
P24941
| 0
|
phosphorylation
|
down-regulates
| 0.246
|
Atm kinase is a master switch for the delta np63 alpha phosphorylation/degradation in human head and neck squamous cell carcinoma cells upon dna damage. We previously found that the pro-apoptotic dna damaging agent, cisplatin, mediated the proteasome-dependent degradation of delta np63 alpha associated with its increased phosphorylated status. We found that delta np63 alpha is phosphorylated in the time-dependent fashion at the following positions: s385, t397 and s466, which were surrounded by recognition motifs for atm, cdk2 and p70s6k kinases, respectively
|
SIGNOR-180759
|
O15169
|
P25054
| 2
|
binding
|
up-regulates activity
| 0.944
|
Axin, an inhibitor of the wnt pathway, interacts with beta-catenin, gsk-3beta and apc and reduces the beta-catenin level.
|
SIGNOR-60043
|
P29350
|
P43403
| 1
|
dephosphorylation
|
down-regulates
| 0.588
|
We propose that shp1 can dephosphorylate sites in zap-70 and syk that are involved in coupling these kinases to downstream signaling cascades, including erk2 and elements of the il-2 gene.
|
SIGNOR-70237
|
Q9BR76
|
P17252
| 0
|
phosphorylation
|
down-regulates
| 0.324
|
We have identified serine 2 (ser-2) on coronin 1b as the major residue phosphorylated by pkc in vivo.In this work, we show that coronin 1b interacts in vivo with the arp2/3 complex and that this interaction is inhibited by pkc phosphorylation.
|
SIGNOR-138733
|
P18031
|
P18031
| 2
|
dephosphorylation
|
down-regulates activity
| 0.2
|
Tyrosine residues 66, 152 and/or 153 of PTP1B are phosphorylated by the activated insulin receptor and are also necessary for formation of the PTP1B:insulin receptor complex| Furthermore, tyrosine phosphorylation of PTP1B by the insulin receptor tyrosine kinase increases the catalytic activity of PTP1B|These results suggest that PTP1B can dephosphorylate itself under in vitro conditions.
|
SIGNOR-248423
|
P49759
|
P00519
| 1
|
phosphorylation
|
down-regulates
| 0.259
|
Here, we identify clk1, clk4, mst1, mst2 and ttk (also known as mps1) as novel thr735 kinases in vitro / phosphorylation of thr735 in c-abl is critical for binding to 14-3-3
|
SIGNOR-181031
|
Q9H1B7
|
P01210
| 1
|
transcriptional regulation
|
down-regulates quantity by repression
| 0.307
|
EAP1 encoded a nuclear protein expressed in neurons involved in the inhibitory and facilitatory control of reproduction. EAP1 transactivated genes required for reproductive function, such as GNRH1, and repressed inhibitory genes, such as preproenkephalin. It contained a RING finger domain of the C3HC4 subclass required for this dual transcriptional activity.These results suggest that EAP1 is a transcriptional regulator that, acting within the neuroendocrine brain, contributes to controlling female reproductive function.
|
SIGNOR-267155
|
Q9Y2T1
|
P49841
| 2
|
binding
|
up-regulates activity
| 0.832
|
It has been found that a multiprotein complex assembled by the cytoplasmic component conductin induces degradation of cytoplasmic beta-catenin. The complex includes apc, the serine/threonine kinase gsk3 beta, and beta-catenin, which bind to conductin at distinct domains.
|
SIGNOR-79950
|
P17252
|
Q6ZVD8
| 0
|
dephosphorylation
|
down-regulates quantity
| 0.253
|
In addition, knockdown of PHLPP expression reduces the rate of phorbol ester-triggered dephosphorylation of the hydrophobic motif, but not turn motif, of PKC alpha
|
SIGNOR-237051
|
O14786
|
Q04741
| 0
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.2
|
EMX1 activates the transcription of Nrp1 in vitro.
|
SIGNOR-261593
|
P33993
|
P60228
| 2
|
binding
|
up-regulates quantity by stabilization
| 0.335
|
Our data show that INT6 interacts with a C-terminal domain of MCM7. Collectively, our observations suggest that INT6 restrains the increased degradation of MCM7 occurring during DNA replication by protecting its polyubiquitylated derivatives from the proteasome activity.
|
SIGNOR-259154
|
P17600
|
O75914
| 0
|
phosphorylation
|
up-regulates activity
| 0.334
|
Synapsin I is phosphorylated at Ser603 by p21-activated kinases. the Ser603 residue must be one of the pivotal sites for the release
|
SIGNOR-250246
|
P12272
|
P24941
| 0
|
phosphorylation
|
down-regulates
| 0.372
|
Phosphorylation at the cyclin-dependent kinases site (thr85) of parathyroid hormone-related protein negatively regulates its nuclear localization
|
SIGNOR-68548
|
Q86UR1
|
P17612
| 0
|
phosphorylation
|
down-regulates
| 0.324
|
We identified ser-282 as target of mapk and ser-172 as target of pkc and pka in vitro and in a transfected human embryonic kidney 293 (hek293) cell model using site directed mutagenesis and phosphopeptide mapping analysis. In hek293 cells, phosphorylation of these sites occurred at a basal level and down-regulated constitutive nox1 activity. I
|
SIGNOR-163663
|
P49321
|
Q9Y4K3
| 2
|
binding
|
down-regulates activity
| 0.2
|
SNASP inhibits TLR4-induced NF-κB activation through TRAF6.Reciprocal immunoprecipitation and Western blot analyses confirmed that endogenous sNASP binds to TRAF6 in human monocyte cell line THP-1 (Figure 1B).Here, we show that somatic nuclear autoantigenic sperm protein (sNASP) binds to TRAF6 to prevent TRAF6 autoubiquitination in unstimulated macrophages. Following LPS stimulation, a complex consisting of sNASP, TRAF6, IRAK4, and casein kinase 2 (CK2) is formed. CK2 phosphorylates sNASP at serine 158, allowing sNASP to dissociate from TRAF6. Free TRAF6 is then autoubiquitinated, followed by activation of downstream signaling pathways.
|
SIGNOR-273655
|
Q00534
|
P06400
| 1
|
phosphorylation
|
down-regulates
| 0.769
|
Phosphorylated by cdk6 and cdk4, and subsequently by cdk2 at ser-567 in g1, thereby releasing e2f1 which is then able to activate cell growth. Here we show that although these cdks phosphorylate multiple residues in prb, they do so with different residue selectivities in vitro;thr821 and thr826 are preferentially phosphorylated by cdk6 and cdk4, respectively.
|
SIGNOR-135189
|
P05412
|
P84022
| 2
|
binding
|
down-regulates activity
| 0.75
|
These results indicate that interaction between Smad3 and c-Jun may repress Smad3 transcriptional activity.
|
SIGNOR-256284
|
Q92585
|
P35222
| 2
|
binding
|
up-regulates
| 0.275
|
Unexpectedly, however, emerging evidence implicate maml proteins as exciting key transcriptional co-activators in other signal transduction pathways including: muscle differentiation and myopathies (mef2c), tumor suppressor pathway (p53) and colon carcinoma survival (beta-catenin).
|
SIGNOR-157843
|
O00254
|
P30679
| 2
|
binding
|
up-regulates activity
| 0.414
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ≥ -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ≥ -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ≥ -1.0.
|
SIGNOR-257360
|
P42229
|
Q9Y6K1
| 1
|
transcriptional regulation
|
up-regulates quantity
| 0.326
|
… these data suggest that STAT5A positively regulates levels of DNMT3A, resulting in inactivation of tumor suppressor genes by epigenetic mechanisms in AML cells
|
SIGNOR-255631
|
P08908
|
P63096
| 2
|
binding
|
up-regulates activity
| 0.494
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ≥ -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ≥ -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ≥ -1.0.
|
SIGNOR-256693
|
Q9Y3E7
|
Q9UN37
| 0
|
cleavage
|
up-regulates activity
| 0.625
|
Here, we show, using high-speed atomic force microscopy and electron microscopy, that the AAA-type adenosine triphosphatase VPS4 constricts and cleaves ESCRT-III CHMP2A-CHMP3 helical filaments in vitro. Our results demonstrate that VPS4 actively constricts ESCRT-III filaments and cleaves them before their complete disassembly. We propose that the formation of ESCRT-III dome-like end caps by VPS4 within a membrane neck structure constricts the membrane to set the stage for membrane fission.
|
SIGNOR-260847
|
P49336
|
Q15797
| 1
|
phosphorylation
|
down-regulates
| 0.383
|
Phosphorylation of the linker region of smad1, a receptor-activated smad (r-smad), at serine 206 (s206) and s214 induced by bmp and mediated by cdk8/9 is critical for binding of the e3 ubiquitin ligase smurf1. Binding of smurf1 leads to polyubiquitination of smad1 and its degradation by the proteasome;cdk8 and cyclint-cdk9 showed a preference for s206 and s214 but also phosphorylated s186 and s195 in the case of smad1;and t179, s208 and s213 in the case of smad3.
|
SIGNOR-161626
|
Q92544
|
Q16665
| 0
|
transcriptional regulation
|
down-regulates quantity by repression
| 0.2
|
Here, we investigated the impact of hypoxia on TM9SF4 expression in leukemic cells and identified TM9SF4 as a direct target of HIF-1α, downregulated in these cells by hypoxia. Then, we found that the hypoxia-mediated downregulation of TM9SF4 expression is associated with a decrease of cell adhesion of leukemic cells to fibronectin, thus demonstrating that human TM9SF4 is a new molecule involved in leukemic cell adhesion.
|
SIGNOR-266705
|
Q06330
|
Q86X95
| 2
|
binding
|
up-regulates
| 0.669
|
In the mechanism of cbf1-mediated repression, cbf1 binds to a unique corepressor cir. Targeting of cir to cbf1 is an important component of repression. Cir binds to histone deacetylase and to sap30 and serves as a linker between cbf1 and the histone deacetylase complex.
|
SIGNOR-62932
|
P46531
|
Q13950
| 2
|
binding
|
down-regulates
| 0.38
|
Runx2 is an inhibitor of the notch1 signaling pathway during normal osteoblast differentiation. The n-terminal domain of runx2 was crucial to the binding and inhibition of the the n-terminus of the notch1 intracellular domain.
|
SIGNOR-167627
|
P63092
|
P30559
| 2
|
binding
|
up-regulates activity
| 0.43
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ‚â• -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ‚â• -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ‚â• -1.0.
|
SIGNOR-256793
|
P42345
|
P23443
| 2
|
phosphorylation
|
up-regulates activity
| 0.96
|
S6K1 is a positive regulator of protein synthesis, and its activity is induced by mTOR-mediated phosphorylation.
|
SIGNOR-101328
|
Q13158
|
Q9BV47
| 0
|
dephosphorylation
|
down-regulates activity
| 0.366
|
This multi-functionality of fadd may depend primarily on its subcellular location. Fadd shuttles between the cytosol and the nucleus and this signal is unclear;however, fadd trafficking requires phosphorylation of the protein on ser194dusp26 suppresses cell proliferation by fadd dephosphorylation
|
SIGNOR-204559
|
Q13480
|
P06213
| 0
|
phosphorylation
|
up-regulates activity
| 0.502
|
HGab-1 was phosphorylated by IR at eight tyrosine residues (Y242, Y285, Y373, Y447, Y472, Y619, Y657, and Y689). t Gab-1 is the major binding partner of PI-3 kinase in 3T3L1 cells when stimulated with insulin
|
SIGNOR-251310
|
P24941
|
Q8WXE1
| 1
|
phosphorylation
|
up-regulates
| 0.579
|
Atrip is a cdk2 substrate, and cdk2-dependent phosphorylation of s224 regulates the ability of atr-atrip to promote cell cycle arrest in response to dna damage./ One possibility is s224 phosphorylation creates a binding site for another protein involved in the g2-m checkpoint response
|
SIGNOR-156928
|
O43474
|
Q9Y4K3
| 0
|
ubiquitination
|
up-regulates quantity by stabilization
| 0.285
|
We further found that inhibition of polo-like kinase 1 could downregulate the expression of KLF4 and that PLK1 directly phosphorylated KLF4 at Ser234. Notably, phosphorylation of KLF4 by PLK1 caused the recruitment and binding of the E3 ligase TRAF6, which resulted in KLF4 K32 K63-linked ubiquitination and stabilization.
|
SIGNOR-277464
|
P51812
|
P31749
| 0
|
phosphorylation
|
down-regulates activity
| 0.265
|
Akt interacts with and phosphorylates RSK2 at S19.
|
SIGNOR-277548
|
P61586
|
Q13393
| 2
|
binding
|
up-regulates
| 0.697
|
Our results demonstrate that direct stimulation of pld1 in vivo by rhoa
|
SIGNOR-84953
|
Q99607
|
O15550
| 0
|
transcriptional regulation
|
down-regulates quantity by repression
| 0.279
|
Our findings reveal a dual role for UTX in suppressing acute myeloid leukaemia via repression of oncogenic ETS and upregulation of tumor suppressive GATA programs. several ETS transcription factors, including Elf4, Etv6, Erg, Fli1, Ets2, Spi1 and Elk3 were upregulated immediately after Utx loss in the preleukaemic phase
|
SIGNOR-260031
|
P49841
|
P41236
| 1
|
phosphorylation
|
up-regulates activity
| 0.412
|
Protein phosphatase 1 (PP1) is complexed with inhibitor 2 (I-2) in the cytosol. In rabbit muscle extract PP1.I-2 is activated upon preincubation with ATP/Mg. This activation is caused by phosphorylation of I-2 on Thr(72) by glycogen synthase kinase 3 (GSK3).
|
SIGNOR-251257
|
P27361
|
Q01860
| 1
|
phosphorylation
|
down-regulates
| 0.343
|
Phosphorylation of this site downregulates nanog, sox2, rex1 and upregulates bmp4, gata6, ddlx5.
|
SIGNOR-192101
|
Q9UJX6
|
O14640
| 2
|
binding
|
down-regulates
| 0.239
|
We now report that the anaphase-promoting complex (apc/c) recognizes a d-box motif of dvl and ubiquitylates dvl on a highly conserved lysine residue.We now report that expression of the apc/c subunit anapc2 activates the apc/c-dependent degradation of dvl by disrupting canonical wnt signaling.
|
SIGNOR-188393
|
P63096
|
Q99677
| 2
|
binding
|
up-regulates activity
| 0.2
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ≥ -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ≥ -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ≥ -1.0.
|
SIGNOR-257057
|
Q16539
|
Q9BUB5
| 1
|
phosphorylation
|
up-regulates
| 0.672
|
Mnk1, but not mnk2, also binds strongly to the stress-activated kinase, p38.
|
SIGNOR-48346
|
O00141
|
P17612
| 0
|
phosphorylation
|
up-regulates activity
| 0.297
|
In this publication, we demonstrate that cAMP can activate Sgk and that this effect is mediated by PKA, which directly phosphorylates Thr369 in Sgk.
|
SIGNOR-275972
|
P43026
|
O00238
| 2
|
binding
|
up-regulates activity
| 0.774
|
In contrast to other members of the TGF-beta superfamily, GDF-5 shows a pronounced specificity in type I receptor interaction in cross-link experiments binding only to BMP receptor IB (BMPR-IB). In mice, deletion of either GDF-5 or BMPR-IB results in a similar phenotype, indicating that GDF-5 signaling is highly dependent on BMPR-IB.
|
SIGNOR-256483
|
O75962
|
Q05397
| 0
|
phosphorylation
|
up-regulates activity
| 0.509
|
A FAK phosphorylation site, tyrosine residue 2737, was identified in subdomain I of the Trio kinase domain. Additionally, in vitro phosphorylation assays and in vivo co-expression studies indicated that Trio enhances FAK kinase activity.
|
SIGNOR-249188
|
Q9Y2R2
|
P22681
| 1
|
dephosphorylation
|
down-regulates
| 0.387
|
The tyrosine phosphatase lyp1 was found to be constitutively associated with the proto-oncogene c-cbl in thymocytes and t cells. Overexpression of lyp1 reduces cbl tyrosine phosphorylation. It is known that cbl is heavily tyrosine phosphorylated after tcr stimulation and can associate with the syk and zap tyrosine kinases, negatively regulating their activities. Tyrosine phosphatases keep cbl in a basally dephosphorylated state.
|
SIGNOR-65405
|
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