Raw MS/MS Data Directory
This directory stores raw spectral files and database search outputs. These files are not tracked by git (too large for GitHub — mzML files are 500 MB–1 GB each).
Download the data
All raw data files are available on Google Drive: https://drive.google.com/drive/folders/10_67wgMzvbi0jUoLoW7VTXNL3q63BWtL
Download and place the following files in this directory:
| File | Description |
|---|---|
Ecoli_EV_1.mzML |
E. coli EV Orbitrap spectra (replicate 1) |
Ecoli_EV_2.mzML |
E. coli EV Orbitrap spectra (replicate 2) |
Database search output_Ecoli_EV_1.xlsx |
Ground-truth PSM labels (replicate 1) |
Database search output_Ecoli_EV_2.xlsx |
Ground-truth PSM labels (replicate 2) |
wastewater_Sample1_1.mzML |
Wastewater sample 1, replicate 1 |
wastewater_Sample1_2.mzML |
Wastewater sample 1, replicate 2 |
wastewater_Sample2_1.mzML |
Wastewater sample 2, replicate 1 |
wastewater_Sample2_2.mzML |
Wastewater sample 2, replicate 2 |