Commit History

7 days ago

  1. Point the Space links to ntv3⁠

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    4cd1f28

8 days ago

  1. Add the dataset card, all-isoform references and whole test genomes (#1)⁠

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  1. Remove flat root copies superseded by the <clade>/<split>_species/ layout⁠

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    8a0bfb9
  2. Add Brachypodium, Eschscholzia and Freycinetia test species (benchmark references + soft-masked genomes) under plants/test_species/

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    607ccbd
  3. Organise by clade and split: copy every species to <clade>/<split>_species/ and the plant tutorial files to plants/ (flat copies kept for now)

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    a7b7ce7
  4. Add the 10 insect test species (benchmark references + soft-masked genomes) under insects/test_species/

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    d7c92d7

  1. Add the beluga whale (GCF_002288925.2) benchmark reference and soft-masked genome for notebook 03c

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    9f6589e
  2. Add the 20B-token full-preset showcase curve

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    ffd0349
  3. Score Mimulus on its largest chromosome, Chr_11

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    73a5381
  4. Add cow ARS-UCD2.0 (GCF_002263795.3) benchmark genome and reference⁠

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    993f0c3
  5. Add the 03b demo predictions: released NTv3_annot_plants on Medicago NC_053042.1:11.0-12.6 Mb

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    453ba9c

  1. Remove a stray prediction file

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    5041fc1
  2. Add tier-2 training assemblies

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    3d2d56c

  1. Add tier-1 training, validation and test assemblies

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    8a2087a
  2. initial commit

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    c28a728