JoaoJunior/formatted-java-preprocessed-code-APR

public void setOwner(BwUser val) { throw new RuntimeException("Immutable"); }

public void setOwner(BwUser val) { if (!CalFacadeUtil.eqObjval(ref.getOwner(), val)) { ref.setOwner(val); setRefChanged(true); } }

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public Collection ejbFindRefunds(IWTimestamp from, IWTimestamp to) throws FinderException { to.addDays(1); Table table = new Table(this); Column date = new Column(COLUMN_DATE); Column code = new Column(COLUMN_TRANSACTION_TYPE); SelectQuery query = new SelectQuery(table); query.addColumn(new WildCardColumn(table)); query.addCriteria(new MatchCriteria(code, MatchCriteria.EQUALS, KortathjonustanAuthorisationEntries.AUTHORIZATION_TYPE_REFUND)); query.addCriteria(new MatchCriteria(date, MatchCriteria.GREATEREQUAL, from.getDate().toString())); query.addCriteria(new MatchCriteria(date, MatchCriteria.LESSEQUAL, to.getDate().toString())); return this.idoFindPKsByQuery(query); }

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public Collection ejbFindRefunds(IWTimestamp from, IWTimestamp to) throws FinderException { to.addDays(1); Table table = new Table(this); Column date = new Column(COLUMN_DATE); Column code = new Column(COLUMN_TRANSACTION_TYPE); SelectQuery query = new SelectQuery(table); query.addColumn(new WildCardColumn(table)); query.addCriteria(new MatchCriteria(code, MatchCriteria.EQUALS, KortathjonustanAuthorisationEntries.AUTHORIZATION_TYPE_REFUND)); query.addCriteria(new MatchCriteria(date, MatchCriteria.GREATEREQUAL, from.getDate().toString())); query.addCriteria(new MatchCriteria(date, MatchCriteria.LESSEQUAL, to.getDate().toString())); return this.idoFindPKsByQuery(query); }

public Collection ejbFindRefunds(IWTimestamp from, IWTimestamp to) throws FinderException { to.addDays(1); Table table = new Table(this); Column date = new Column(COLUMN_DATE); Column code = new Column(COLUMN_TRANSACTION_TYPE); SelectQuery query = new SelectQuery(table); query.addColumn(new Column(table, getIDColumnName())); query.addCriteria(new MatchCriteria(code, MatchCriteria.EQUALS, KortathjonustanAuthorisationEntries.AUTHORIZATION_TYPE_REFUND)); query.addCriteria(new MatchCriteria(date, MatchCriteria.GREATEREQUAL, from.getDate().toString())); query.addCriteria(new MatchCriteria(date, MatchCriteria.LESSEQUAL, to.getDate().toString())); return this.idoFindPKsByQuery(query); }

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public static DataSetSeismogram[] getComponents(DataSetSeismogram seismogram){ DataSet dataSet = seismogram.getDataSet(); RequestFilter rf = seismogram.getRequestFilter(); return getComponents(dataSet, rf); }

public static DataSetSeismogram[] getComponents(DataSetSeismogram seismogram){ DataSet dataSet = seismogram.getDataSet(); RequestFilter rf = seismogram.getRequestFilter(); Set componentSeismograms = new HashSet(); MicroSecondTimeRange tr = new MicroSecondTimeRange(rf); ChannelId chanId = rf.channel_id; String[] names = dataSet.getDataSetSeismogramNames(); for (int i = 0; i < names.length; i++ ) { DataSetSeismogram currentSeis = dataSet.getDataSetSeismogram(names[i]); RequestFilter currentRF = currentSeis.getRequestFilter(); MicroSecondTimeRange curTr = new MicroSecondTimeRange(currentRF); if(areFriends(chanId,currentRF.channel_id) && tr.equals(curTr)) componentSeismograms.add(currentSeis); } if(componentSeismograms.size() < 3) for (int i = 0; i < names.length; i++ ) { DataSetSeismogram currentSeis = dataSet.getDataSetSeismogram(names[i]); RequestFilter currentRF = currentSeis.getRequestFilter(); MicroSecondTimeRange curTr = new MicroSecondTimeRange(currentRF); if(areFriends(chanId,currentRF.channel_id) && areOverlapping(tr, curTr)) componentSeismograms.add(currentSeis); } DataSetSeismogram[] components = new DataSetSeismogram[componentSeismograms.size()]; componentSeismograms.toArray(components); return components; }

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public boolean equals(MicroSecondTimeRange otherTime){ if(this == otherTime){ return true; } return false; }

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public void draw(UnitRangeImpl range, Graphics2D g2d) { Iterator it = titles.iterator(); int cumulativeTitleHeight = 0; while(it.hasNext()) { TitleProvider tp = (TitleProvider)it.next(); g2d.setFont(tp.getTitleFont()); FontMetrics fm = g2d.getFontMetrics(); Rectangle2D titleBounds = fm.getStringBounds(tp.getTitle(), g2d); cumulativeTitleHeight += titleBounds.getHeight(); if(direction == VERTICAL) { double y = (int)(getSize().height / 2 + titleBounds.getWidth() / 2); double x; if(side == LEFT) x = cumulativeTitleHeight - 5; else x = getWidth() - cumulativeTitleHeight + (int)titleBounds.getHeight() - 5; g2d.translate(x, y); g2d.rotate(-Math.PI / 2); g2d.drawString(tp.getTitle(), 0, 0); g2d.rotate(Math.PI / 2); g2d.translate(-x, -y); } else { int x = (int)(getWidth() / 2 - titleBounds.getWidth() / 2); int y; if(side == TOP) y = cumulativeTitleHeight - 5; else y = getHeight() - cumulativeTitleHeight + (int)titleBounds.getHeight() - 5; g2d.drawString(tp.getTitle(), x, y); } } if(range != null) { double numDivisions = (range.max_value - range.min_value) / divSize; double pixelsPerLabelTick = getLimitingSize() / numDivisions; double pixelsPerMinorTick = pixelsPerLabelTick / ticksPerDiv; double labelValPerTick = divSize / ticksPerDiv; int numLabelTicks = (int)Math.ceil(numDivisions) + 1; //Create tick shapes GeneralPath labelTickShape = new GeneralPath(); GeneralPath minorTickShape = new GeneralPath(); float[] nextLabelPoint = getFirstPoint(); double labelValue = getFirstLabelValue(range); if(!clipTicks) { minTickValue = 0; maxTickValue = Double.MAX_VALUE; } for(int i = 0; i < numLabelTicks; i++) { if((labelValue >= minTickValue && labelValue <= maxTickValue)) { labelTickShape.moveTo(nextLabelPoint[0], nextLabelPoint[1]); labelTickShape.lineTo(nextLabelPoint[0] + labelTickWidth, nextLabelPoint[1] + labelTickHeight); float[] nextMinorPoint = getNextPoint((float)pixelsPerMinorTick, nextLabelPoint); double tempVal = labelValue; for(int j = 0; j < ticksPerDiv - 1; j++) { if(tempVal >= maxTickValue) { break; } minorTickShape.moveTo(nextMinorPoint[0], nextMinorPoint[1]); minorTickShape.lineTo(nextMinorPoint[0] + tickWidth, nextMinorPoint[1] + tickHeight); nextMinorPoint = getNextPoint((float)pixelsPerMinorTick, nextMinorPoint); tempVal += labelValPerTick; } } nextLabelPoint = getNextPoint((float)pixelsPerLabelTick, nextLabelPoint); labelValue += divSize; } //Figure out how much to translate this generic tick shape to // match //the actual time double[] translation = getTranslation(range); //Casing the translation to an int removes tick jitter in // borders //where the values have changed, but the range hasn't. Since // they //move by an integral amount, they move in lockstep. This // introduces //inaccuracy in translations that wouldn't naturally be an int. //Be forewarned! g2d.translate((int)translation[0], (int)translation[1]); g2d.setStroke(DisplayUtils.TWO_PIXEL_STROKE); g2d.draw(labelTickShape); g2d.setStroke(DisplayUtils.ONE_PIXEL_STROKE); g2d.draw(minorTickShape); double value = getFirstLabelValue(range); nextLabelPoint = getFirstPoint(); g2d.setFont(getFont()); for(int i = 0; i < numLabelTicks; i++) { if((value >= minTickValue && value <= maxTickValue)) { label(getLabel(value), nextLabelPoint, g2d, translation[1]); } value += divSize; nextLabelPoint = getNextPoint((float)pixelsPerLabelTick, nextLabelPoint); } g2d.translate(-(int)translation[0], -(int)translation[1]); } }

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private void fixSize() { int tpHeight = 0; Iterator it = titles.iterator(); while(it.hasNext()) { //TODO - calculate based on actual string, font metrics TitleProvider tp = (TitleProvider)it.next(); tpHeight += tp.getTitleFont().getSize(); } if(direction == HORIZONTAL) { int height = 25 + labelTickLength + tpHeight; if(labelTickLength == 0) { height = tpHeight + 10; } setMinimumSize(new Dimension(0, height)); setPreferredSize(new Dimension(100, height)); } else { int width = 50 + labelTickLength + tpHeight; if(labelTickLength == 0) { width = tpHeight + 10; } setMinimumSize(new Dimension(width, 0)); setPreferredSize(new Dimension(width, 100)); } }

private void fixSize() { int tpHeight = 0; Iterator it = titles.iterator(); while(it.hasNext()) { //TODO - calculate based on actual string, font metrics TitleProvider tp = (TitleProvider)it.next(); tpHeight += tp.getTitleFont().getSize(); } if(direction == HORIZONTAL) { int height = 25 + labelTickLength + tpHeight; if(labelTickLength == 0) { height = tpHeight + 10; } setMinimumSize(new Dimension(0, height)); setPreferredSize(new Dimension(100, height)); } else { int width = 6 * getMaxLengthFormattedString().length() + labelTickLength + tpHeight; if(labelTickLength == 0) { width = tpHeight + 10; } setMinimumSize(new Dimension(width, 0)); setPreferredSize(new Dimension(width, 100)); } }

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public void pasteIdea() { DataFlavor ideaFlavour = new DataFlavor(Idea.class, "Idea"); Clipboard cb = getToolkit().getSystemClipboard(); try { if (cb.isDataFlavorAvailable(ideaFlavour)){ Idea idea = (Idea)getToolkit().getSystemClipboard( ).getContents(this).getTransferData(ideaFlavour); ideaMap.getSelected().add(idea.clone()); } else if (cb.isDataFlavorAvailable( DataFlavor.javaFileListFlavor)){ boolean err = false; final Object os = getToolkit().getSystemClipboard( ).getContents(this).getTransferData( DataFlavor.javaFileListFlavor); File f = (File)((Collection)os).iterator().next(); boolean isOpml = f.getName().toUpperCase().endsWith(".OPML"); if (isOpml) { ReaderFactory factory = ReaderFactory.getInstance(); IdeaDocument document = factory.read(f); if (ideaMap.getSelected() != null) { int answer = JOptionPane.showConfirmDialog(ideaMap, resBundle.getString("insert_drag_question"), resBundle.getString("app.name"), JOptionPane.YES_NO_CANCEL_OPTION); if (answer == JOptionPane.YES_OPTION) { ideaMap.getSelected().add(document.getIdea()); } else if (answer == JOptionPane.NO_OPTION) { this.setDocument(document); } } else { Main.getMainframe().setDocument(document); } } else if (ideaMap.getSelected() != null) { Idea idea = new Idea(f.getName()); idea.setDescription(f.toString()); String url = Utilities.toStringUrl(f); idea.setUrl(url); ideaMap.getSelected().add(idea); } } else if (cb.isDataFlavorAvailable( DataFlavor.stringFlavor)){ String s = getToolkit().getSystemClipboard( ).getContents(this).getTransferData( DataFlavor.stringFlavor).toString(); boolean isURLFormatted = (s.indexOf(':') >= 2); if (isURLFormatted) { // DnD from firefox introduces a \n followed by the anchor label (like "RSS feed") // that appears on the page. Hence, use only the substring upto the \n int linebreakIndex = s.indexOf('\n'); String insertText = null; Idea idea = new Idea(s); if (s.startsWith("http") && (linebreakIndex != -1)) { insertText = s.substring(0,linebreakIndex); idea.setText(s.substring(linebreakIndex + 1)); } else { //DnD from IE and other browsers;use the string as it is. insertText = s; } if (insertText.startsWith("x-yojimbo-item:")) { idea.setText("Yojimbo item"); } idea.setUrl(insertText); ideaMap.getSelected().add(idea); } } } catch (Exception e) { } }

public void pasteIdea() { DataFlavor ideaFlavour = new DataFlavor(Idea.class, "Idea"); Clipboard cb = getToolkit().getSystemClipboard(); try { if (isIdea){ Idea idea = (Idea)getToolkit().getSystemClipboard( ).getContents(this).getTransferData(ideaFlavour); ideaMap.getSelected().add(idea.clone()); } else if (cb.isDataFlavorAvailable( DataFlavor.javaFileListFlavor)){ boolean err = false; final Object os = getToolkit().getSystemClipboard( ).getContents(this).getTransferData( DataFlavor.javaFileListFlavor); File f = (File)((Collection)os).iterator().next(); boolean isOpml = f.getName().toUpperCase().endsWith(".OPML"); if (isOpml) { ReaderFactory factory = ReaderFactory.getInstance(); IdeaDocument document = factory.read(f); if (ideaMap.getSelected() != null) { int answer = JOptionPane.showConfirmDialog(ideaMap, resBundle.getString("insert_drag_question"), resBundle.getString("app.name"), JOptionPane.YES_NO_CANCEL_OPTION); if (answer == JOptionPane.YES_OPTION) { ideaMap.getSelected().add(document.getIdea()); } else if (answer == JOptionPane.NO_OPTION) { this.setDocument(document); } } else { Main.getMainframe().setDocument(document); } } else if (ideaMap.getSelected() != null) { Idea idea = new Idea(f.getName()); idea.setDescription(f.toString()); String url = Utilities.toStringUrl(f); idea.setUrl(url); ideaMap.getSelected().add(idea); } } else if (cb.isDataFlavorAvailable( DataFlavor.stringFlavor)){ String s = getToolkit().getSystemClipboard( ).getContents(this).getTransferData( DataFlavor.stringFlavor).toString(); boolean isURLFormatted = (s.indexOf(':') >= 2); if (isURLFormatted) { // DnD from firefox introduces a \n followed by the anchor label (like "RSS feed") // that appears on the page. Hence, use only the substring upto the \n int linebreakIndex = s.indexOf('\n'); String insertText = null; Idea idea = new Idea(s); if (s.startsWith("http") && (linebreakIndex != -1)) { insertText = s.substring(0,linebreakIndex); idea.setText(s.substring(linebreakIndex + 1)); } else { //DnD from IE and other browsers;use the string as it is. insertText = s; } if (insertText.startsWith("x-yojimbo-item:")) { idea.setText("Yojimbo item"); } idea.setUrl(insertText); ideaMap.getSelected().add(idea); } } } catch (Exception e) { } }

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public IdeaReader read(File f) throws ReaderException { try { if (f.getName().toLowerCase().endsWith(".opml")) { return new OPMLReader(new FileInputStream(f)); } } catch (Exception e) { throw new ReaderException("Unable to read file " + f, e); } throw new ReaderException("Unknown file type for " + f, null); }

public Idea read(File f) throws ReaderException { try { if (f.getName().toLowerCase().endsWith(".opml")) { return new OPMLReader(new FileInputStream(f)); } } catch (Exception e) { throw new ReaderException("Unable to read file " + f, e); } throw new ReaderException("Unknown file type for " + f, null); }

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public IdeaReader read(File f) throws ReaderException { try { if (f.getName().toLowerCase().endsWith(".opml")) { return new OPMLReader(new FileInputStream(f)); } } catch (Exception e) { throw new ReaderException("Unable to read file " + f, e); } throw new ReaderException("Unknown file type for " + f, null); }

public IdeaReader read(File f) throws ReaderException { try { if (f.getName().toLowerCase().endsWith(".opml")) { reader = new OPMLReader(new FileInputStream(f)); } if (reader != null) { return reader.getIdea(); } } catch (Exception e) { throw new ReaderException("Unable to read file " + f, e); } throw new ReaderException("Unknown file type for " + f, null); }

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public LocalSeismogramImpl cut(Location stationLoc, Origin origin, LocalSeismogramImpl seis) throws TauModelException, PhaseNonExistent, FissuresException { Arrival[] arrivals = timeCalc.calcTravelTimes(stationLoc, origin, new String[] {beginPhase, endPhase}); MicroSecondDate beginTime = null; MicroSecondDate endTime = null; MicroSecondDate originTime = new MicroSecondDate(origin.origin_time); for (int i=0; i< arrivals.length; i++) { if (arrivals[i].getName().equals(beginPhase)) { beginTime = originTime.add(new TimeInterval(arrivals[i].getTime(), UnitImpl.SECOND)); break; } } if (beginTime == null) { DistAz distAz = new DistAz(stationLoc.latitude, stationLoc.longitude, origin.my_location.latitude, origin.my_location.longitude); throw new PhaseNonExistent("Phase "+beginPhase+ " does not exist at this distance, "+ distAz.delta+" degrees"); } beginTime = beginTime.add(beginOffset); for (int i=0; i< arrivals.length; i++) { if (arrivals[i].getName().equals(endPhase)) { endTime = originTime.add(new TimeInterval(arrivals[i].getTime(), UnitImpl.SECOND)); break; } } if (endTime == null) { DistAz distAz = new DistAz(stationLoc.latitude, stationLoc.longitude, origin.my_location.latitude, origin.my_location.longitude); throw new PhaseNonExistent("Phase "+endPhase+ " does not exist at this distance, "+ distAz.delta+" degrees"); } endTime = endTime.add(endOffset); logger.debug("Phase cut from "+beginTime+" to "+endTime); Cut cut = new Cut(beginTime, endTime); return cut.apply(seis); }

public LocalSeismogramImpl cut(Location stationLoc, Origin origin, LocalSeismogramImpl seis) throws TauModelException, PhaseNonExistent, FissuresException { Arrival[] beginArrivals = timeCalc.calcTravelTimes(stationLoc, origin, new String[] {beginPhase}); Arrival[] endArrivals = timeCalc.calcTravelTimes(stationLoc, origin, new String[] {endPhase}); MicroSecondDate beginTime = null; MicroSecondDate endTime = null; MicroSecondDate originTime = new MicroSecondDate(origin.origin_time); for (int i=0; i< arrivals.length; i++) { if (arrivals[i].getName().equals(beginPhase)) { beginTime = originTime.add(new TimeInterval(arrivals[i].getTime(), UnitImpl.SECOND)); break; } } if (beginTime == null) { DistAz distAz = new DistAz(stationLoc.latitude, stationLoc.longitude, origin.my_location.latitude, origin.my_location.longitude); throw new PhaseNonExistent("Phase "+beginPhase+ " does not exist at this distance, "+ distAz.delta+" degrees"); } beginTime = beginTime.add(beginOffset); for (int i=0; i< arrivals.length; i++) { if (arrivals[i].getName().equals(endPhase)) { endTime = originTime.add(new TimeInterval(arrivals[i].getTime(), UnitImpl.SECOND)); break; } } if (endTime == null) { DistAz distAz = new DistAz(stationLoc.latitude, stationLoc.longitude, origin.my_location.latitude, origin.my_location.longitude); throw new PhaseNonExistent("Phase "+endPhase+ " does not exist at this distance, "+ distAz.delta+" degrees"); } endTime = endTime.add(endOffset); logger.debug("Phase cut from "+beginTime+" to "+endTime); Cut cut = new Cut(beginTime, endTime); return cut.apply(seis); }

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public LocalSeismogramImpl cut(Location stationLoc, Origin origin, LocalSeismogramImpl seis) throws TauModelException, PhaseNonExistent, FissuresException { Arrival[] arrivals = timeCalc.calcTravelTimes(stationLoc, origin, new String[] {beginPhase, endPhase}); MicroSecondDate beginTime = null; MicroSecondDate endTime = null; MicroSecondDate originTime = new MicroSecondDate(origin.origin_time); for (int i=0; i< arrivals.length; i++) { if (arrivals[i].getName().equals(beginPhase)) { beginTime = originTime.add(new TimeInterval(arrivals[i].getTime(), UnitImpl.SECOND)); break; } } if (beginTime == null) { DistAz distAz = new DistAz(stationLoc.latitude, stationLoc.longitude, origin.my_location.latitude, origin.my_location.longitude); throw new PhaseNonExistent("Phase "+beginPhase+ " does not exist at this distance, "+ distAz.delta+" degrees"); } beginTime = beginTime.add(beginOffset); for (int i=0; i< arrivals.length; i++) { if (arrivals[i].getName().equals(endPhase)) { endTime = originTime.add(new TimeInterval(arrivals[i].getTime(), UnitImpl.SECOND)); break; } } if (endTime == null) { DistAz distAz = new DistAz(stationLoc.latitude, stationLoc.longitude, origin.my_location.latitude, origin.my_location.longitude); throw new PhaseNonExistent("Phase "+endPhase+ " does not exist at this distance, "+ distAz.delta+" degrees"); } endTime = endTime.add(endOffset); logger.debug("Phase cut from "+beginTime+" to "+endTime); Cut cut = new Cut(beginTime, endTime); return cut.apply(seis); }

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public LocalSeismogramImpl cut(Location stationLoc, Origin origin, LocalSeismogramImpl seis) throws TauModelException, PhaseNonExistent, FissuresException { Arrival[] arrivals = timeCalc.calcTravelTimes(stationLoc, origin, new String[] {beginPhase, endPhase}); MicroSecondDate beginTime = null; MicroSecondDate endTime = null; MicroSecondDate originTime = new MicroSecondDate(origin.origin_time); for (int i=0; i< arrivals.length; i++) { if (arrivals[i].getName().equals(beginPhase)) { beginTime = originTime.add(new TimeInterval(arrivals[i].getTime(), UnitImpl.SECOND)); break; } } if (beginTime == null) { DistAz distAz = new DistAz(stationLoc.latitude, stationLoc.longitude, origin.my_location.latitude, origin.my_location.longitude); throw new PhaseNonExistent("Phase "+beginPhase+ " does not exist at this distance, "+ distAz.delta+" degrees"); } beginTime = beginTime.add(beginOffset); for (int i=0; i< arrivals.length; i++) { if (arrivals[i].getName().equals(endPhase)) { endTime = originTime.add(new TimeInterval(arrivals[i].getTime(), UnitImpl.SECOND)); break; } } if (endTime == null) { DistAz distAz = new DistAz(stationLoc.latitude, stationLoc.longitude, origin.my_location.latitude, origin.my_location.longitude); throw new PhaseNonExistent("Phase "+endPhase+ " does not exist at this distance, "+ distAz.delta+" degrees"); } endTime = endTime.add(endOffset); logger.debug("Phase cut from "+beginTime+" to "+endTime); Cut cut = new Cut(beginTime, endTime); return cut.apply(seis); }

public LocalSeismogramImpl cut(Location stationLoc, Origin origin, LocalSeismogramImpl seis) throws TauModelException, PhaseNonExistent, FissuresException { Arrival[] arrivals = timeCalc.calcTravelTimes(stationLoc, origin, new String[] {beginPhase, endPhase}); MicroSecondDate beginTime = null; MicroSecondDate endTime = null; MicroSecondDate originTime = new MicroSecondDate(origin.origin_time); for (int i=0; i< arrivals.length; i++) { if (arrivals[i].getName().equals(beginPhase)) { beginTime = originTime.add(new TimeInterval(arrivals[i].getTime(), UnitImpl.SECOND)); break; } } if (beginTime == null) { DistAz distAz = new DistAz(stationLoc.latitude, stationLoc.longitude, origin.my_location.latitude, origin.my_location.longitude); throw new PhaseNonExistent("Phase "+beginPhase+ " does not exist at this distance, "+ distAz.delta+" degrees"); } for (int i=0; i< arrivals.length; i++) { if (arrivals[i].getName().equals(endPhase)) { endTime = originTime.add(new TimeInterval(arrivals[i].getTime(), UnitImpl.SECOND)); break; } } if (endTime == null) { DistAz distAz = new DistAz(stationLoc.latitude, stationLoc.longitude, origin.my_location.latitude, origin.my_location.longitude); throw new PhaseNonExistent("Phase "+endPhase+ " does not exist at this distance, "+ distAz.delta+" degrees"); } endTime = endTime.add(endOffset); logger.debug("Phase cut from "+beginTime+" to "+endTime); Cut cut = new Cut(beginTime, endTime); return cut.apply(seis); }

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public LocalSeismogramImpl cut(Location stationLoc, Origin origin, LocalSeismogramImpl seis) throws TauModelException, PhaseNonExistent, FissuresException { Arrival[] arrivals = timeCalc.calcTravelTimes(stationLoc, origin, new String[] {beginPhase, endPhase}); MicroSecondDate beginTime = null; MicroSecondDate endTime = null; MicroSecondDate originTime = new MicroSecondDate(origin.origin_time); for (int i=0; i< arrivals.length; i++) { if (arrivals[i].getName().equals(beginPhase)) { beginTime = originTime.add(new TimeInterval(arrivals[i].getTime(), UnitImpl.SECOND)); break; } } if (beginTime == null) { DistAz distAz = new DistAz(stationLoc.latitude, stationLoc.longitude, origin.my_location.latitude, origin.my_location.longitude); throw new PhaseNonExistent("Phase "+beginPhase+ " does not exist at this distance, "+ distAz.delta+" degrees"); } beginTime = beginTime.add(beginOffset); for (int i=0; i< arrivals.length; i++) { if (arrivals[i].getName().equals(endPhase)) { endTime = originTime.add(new TimeInterval(arrivals[i].getTime(), UnitImpl.SECOND)); break; } } if (endTime == null) { DistAz distAz = new DistAz(stationLoc.latitude, stationLoc.longitude, origin.my_location.latitude, origin.my_location.longitude); throw new PhaseNonExistent("Phase "+endPhase+ " does not exist at this distance, "+ distAz.delta+" degrees"); } endTime = endTime.add(endOffset); logger.debug("Phase cut from "+beginTime+" to "+endTime); Cut cut = new Cut(beginTime, endTime); return cut.apply(seis); }

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public LocalSeismogramImpl cut(Location stationLoc, Origin origin, LocalSeismogramImpl seis) throws TauModelException, PhaseNonExistent, FissuresException { Arrival[] arrivals = timeCalc.calcTravelTimes(stationLoc, origin, new String[] {beginPhase, endPhase}); MicroSecondDate beginTime = null; MicroSecondDate endTime = null; MicroSecondDate originTime = new MicroSecondDate(origin.origin_time); for (int i=0; i< arrivals.length; i++) { if (arrivals[i].getName().equals(beginPhase)) { beginTime = originTime.add(new TimeInterval(arrivals[i].getTime(), UnitImpl.SECOND)); break; } } if (beginTime == null) { DistAz distAz = new DistAz(stationLoc.latitude, stationLoc.longitude, origin.my_location.latitude, origin.my_location.longitude); throw new PhaseNonExistent("Phase "+beginPhase+ " does not exist at this distance, "+ distAz.delta+" degrees"); } beginTime = beginTime.add(beginOffset); for (int i=0; i< arrivals.length; i++) { if (arrivals[i].getName().equals(endPhase)) { endTime = originTime.add(new TimeInterval(arrivals[i].getTime(), UnitImpl.SECOND)); break; } } if (endTime == null) { DistAz distAz = new DistAz(stationLoc.latitude, stationLoc.longitude, origin.my_location.latitude, origin.my_location.longitude); throw new PhaseNonExistent("Phase "+endPhase+ " does not exist at this distance, "+ distAz.delta+" degrees"); } endTime = endTime.add(endOffset); logger.debug("Phase cut from "+beginTime+" to "+endTime); Cut cut = new Cut(beginTime, endTime); return cut.apply(seis); }

public LocalSeismogramImpl cut(Location stationLoc, Origin origin, LocalSeismogramImpl seis) throws TauModelException, PhaseNonExistent, FissuresException { Arrival[] arrivals = timeCalc.calcTravelTimes(stationLoc, origin, new String[] {beginPhase, endPhase}); MicroSecondDate beginTime = null; MicroSecondDate endTime = null; MicroSecondDate originTime = new MicroSecondDate(origin.origin_time); for (int i=0; i< arrivals.length; i++) { if (arrivals[i].getName().equals(beginPhase)) { beginTime = originTime.add(new TimeInterval(arrivals[i].getTime(), UnitImpl.SECOND)); break; } } if (beginTime == null) { DistAz distAz = new DistAz(stationLoc.latitude, stationLoc.longitude, origin.my_location.latitude, origin.my_location.longitude); throw new PhaseNonExistent("Phase "+beginPhase+ " does not exist at this distance, "+ distAz.delta+" degrees"); } beginTime = beginTime.add(beginOffset); for (int i=0; i< arrivals.length; i++) { if (arrivals[i].getName().equals(endPhase)) { endTime = originTime.add(new TimeInterval(arrivals[i].getTime(), UnitImpl.SECOND)); break; } } if (endTime == null) { DistAz distAz = new DistAz(stationLoc.latitude, stationLoc.longitude, origin.my_location.latitude, origin.my_location.longitude); throw new PhaseNonExistent("Phase "+endPhase+ " does not exist at this distance, "+ distAz.delta+" degrees"); } logger.debug("Phase cut from "+beginTime+" to "+endTime); Cut cut = new Cut(beginTime, endTime); return cut.apply(seis); }

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public ATObject meta_newInstance(ATTable initargs) throws InterpreterException { ATObject newhost = initargs.base_at(NATNumber.ONE); return new NATField(name_, (NATCallframe) newhost); }

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public void testMakeReportImage() { report.addMSeedSeismogram(); report.addMSeedSeismogram(); report.addMSeedSeismogram(); report.addSacSeismogram(); report.addSacSeismogram(); report.addSacSeismogram(); report.addFileFormatException("File location01", "Problem description01"); report.addMalformedFileNameException("File location02", "Problem description02"); report.addUnsupportedFileException("File location03", "Problem description03"); Channel channel1 = MockChannel.createChannel(); Channel channel2 = MockChannel.createOtherNetChan(); ISOTime beginTime1 = new ISOTime(2005, 115, 12, 30, (float)15.0); ISOTime endTime1 = new ISOTime(2005, 115, 13, 30, (float)15.0); ISOTime beginTime2 = new ISOTime(2005, 115, 13, 30, (float)15.0); ISOTime endTime2 = new ISOTime(2005, 115, 14, 30, (float)15.0); ISOTime beginTime3 = new ISOTime(2005, 115, 15, 30, (float)15.0); ISOTime endTime3 = new ISOTime(2005, 115, 16, 30, (float)15.0); report.addRefTekSeismogram(channel1, beginTime1.getDate(), endTime1.getDate()); report.addRefTekSeismogram(channel1, beginTime2.getDate(), endTime2.getDate()); report.addRefTekSeismogram(channel2, beginTime1.getDate(), endTime1.getDate()); report.addRefTekSeismogram(channel2, beginTime3.getDate(), endTime3.getDate()); report.outputReport(); }

public void testMakeReportImage() { report.addMSeedSeismogram(); report.addMSeedSeismogram(); report.addMSeedSeismogram(); report.addSacSeismogram(); report.addSacSeismogram(); report.addSacSeismogram(); report.addFileFormatException("File location01", "Problem description01"); report.addMalformedFileNameException("File location02", "Problem description02"); report.addUnsupportedFileException("File location03", "Problem description03"); Channel channel1 = MockChannel.createChannel(); Channel channel2 = MockChannel.createOtherNetChan(); ISOTime beginTime1 = new ISOTime(2005, 115, 12, 30, (float)15.0); ISOTime endTime1 = new ISOTime(2005, 115, 13, 30, (float)15.0); ISOTime beginTime2 = new ISOTime(2005, 115, 13, 30, (float)15.0); ISOTime endTime2 = new ISOTime(2005, 115, 14, 30, (float)15.0); ISOTime beginTime3 = new ISOTime(2005, 115, 15, 30, (float)15.0); ISOTime endTime3 = new ISOTime(2005, 115, 16, 30, (float)15.0); report.addRefTekSeismogram(channel1, beginTime1.getDate(), endTime1.getDate()); report.addRefTekSeismogram(channel1, beginTime2.getDate(), endTime2.getDate()); report.addRefTekSeismogram(channel2, beginTime1.getDate(), endTime1.getDate()); report.addRefTekSeismogram(channel2, beginTime3.getDate(), endTime3.getDate()); report.outputReport(null); }

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public void testPrintReport() { report.addMSeedSeismogram(); report.addMSeedSeismogram(); report.addMSeedSeismogram(); report.addSacSeismogram(); report.addSacSeismogram(); report.addSacSeismogram(); report.addFileFormatException("File location01", "Problem description01"); report.addMalformedFileNameException("File location02", "Problem description02"); report.addUnsupportedFileException("File location03", "Problem description03"); Channel channel1 = MockChannel.createChannel(); Channel channel2 = MockChannel.createOtherNetChan(); ISOTime beginTime1 = new ISOTime(2005, 115, 12, 30, (float)15.0); ISOTime endTime1 = new ISOTime(2005, 115, 13, 30, (float)15.0); ISOTime beginTime2 = new ISOTime(2005, 115, 13, 30, (float)15.0); ISOTime endTime2 = new ISOTime(2005, 115, 14, 30, (float)15.0); ISOTime beginTime3 = new ISOTime(2005, 115, 15, 30, (float)15.0); ISOTime endTime3 = new ISOTime(2005, 115, 16, 30, (float)15.0); report.addRefTekSeismogram(channel1, beginTime1.getDate(), endTime1.getDate()); report.addRefTekSeismogram(channel1, beginTime2.getDate(), endTime2.getDate()); report.addRefTekSeismogram(channel2, beginTime1.getDate(), endTime1.getDate()); report.addRefTekSeismogram(channel2, beginTime3.getDate(), endTime3.getDate()); report.outputReport(); }

public void testPrintReport() { report.addMSeedSeismogram(); report.addMSeedSeismogram(); report.addMSeedSeismogram(); report.addSacSeismogram(); report.addSacSeismogram(); report.addSacSeismogram(); report.addFileFormatException("File location01", "Problem description01"); report.addMalformedFileNameException("File location02", "Problem description02"); report.addUnsupportedFileException("File location03", "Problem description03"); Channel channel1 = MockChannel.createChannel(); Channel channel2 = MockChannel.createOtherNetChan(); ISOTime beginTime1 = new ISOTime(2005, 115, 12, 30, (float)15.0); ISOTime endTime1 = new ISOTime(2005, 115, 13, 30, (float)15.0); ISOTime beginTime2 = new ISOTime(2005, 115, 13, 30, (float)15.0); ISOTime endTime2 = new ISOTime(2005, 115, 14, 30, (float)15.0); ISOTime beginTime3 = new ISOTime(2005, 115, 15, 30, (float)15.0); ISOTime endTime3 = new ISOTime(2005, 115, 16, 30, (float)15.0); report.addRefTekSeismogram(channel1, beginTime1.getDate(), endTime1.getDate()); report.addRefTekSeismogram(channel1, beginTime2.getDate(), endTime2.getDate()); report.addRefTekSeismogram(channel2, beginTime1.getDate(), endTime1.getDate()); report.addRefTekSeismogram(channel2, beginTime3.getDate(), endTime3.getDate()); report.outputReport(null); }

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public static Channel createChannel() { return createChannel(MockChannelId.createVerticalChanId(), "Vertical Channel", MockSite.createSite()); }

public static Channel createChannel() { return createChannel(MockChannelId.createVerticalChanId(), "Vertical Channel", MockSite.createSite(), VERTICAL); }

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public static Channel createOtherNetChan() { return createChannel(MockChannelId.createOtherNetChanId(), "Other Net Vertical Channel", MockSite.createOtherSite()); }

public static Channel createOtherNetChan() { return createChannel(MockChannelId.createOtherNetChanId(), "Other Net Vertical Channel", MockSite.createOtherSite(), VERTICAL); }

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public static Channel createEastChannel() { return createChannel(MockChannelId.createEastChanId(), "East Channel", MockSite.createSite()); }

public static Channel createEastChannel() { return createChannel(MockChannelId.createEastChanId(), "East Channel", MockSite.createSite(), EAST); }

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public static Channel[] createMotionVector(Station station) { Channel[] channels = new Channel[3]; Site s = MockSite.createSite(station); String[] codes = {"BHZ", "BHN", "BHE"}; for(int i = 0; i < codes.length; i++) { channels[i] = createChannel(MockChannelId.createChanId(codes[i], s), "Motion Vector Channel " + codes[i], s); } return channels; }

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public static Channel createNorthChannel() { return createChannel(MockChannelId.createNorthChanId(), "North Channel", MockSite.createSite()); }

public static Channel createNorthChannel() { return createChannel(MockChannelId.createNorthChanId(), "North Channel", MockSite.createSite(), NORTH); }

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public void run() { for (int i = 0; i < 3; i++){ logger.info("run " + (i + 1) + " of " + repeats + " for " + r); r.run(); } }

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public boolean isRowCached(int row) { if (backgrounded.containsKey(events[row])) { return false; } if ( ! cachedEvents.containsKey(events[row])) { // load in background CacheEvent cache; if (events[row] instanceof CacheEvent){ cache = (CacheEvent)events[row]; } else{ cache = new CacheEvent(events[row]); } backgrounded.put(events[row], cache); System.out.println("ETM 173: events[row]: " + events[row]); System.out.println("ETM 174: cache: " + cache); rowNumber.put(events[row], new Integer(row)); loader.getEvent(events[row], cache, this); return false; } else { return true; } }

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public String getGeographicRegionName(int geoNum) { if (geoNum > 0 && geoNum <= 729) { return feProps.getProperty("GeogRegion"+geoNum); } // end of if (geoNum > 0 && geoNum <= 729) return "GeoRegion"+geoNum; }

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public Collection ejbFindRefunds(IWTimestamp from, IWTimestamp to) throws FinderException { to.addDays(1); Table table = new Table(this); Column date = new Column(COLUMN_DATE); Column code = new Column(COLUMN_TRANSACTION_TYPE); SelectQuery query = new SelectQuery(table); query.addColumn(new WildCardColumn(table)); query.addCriteria(new MatchCriteria(code, MatchCriteria.EQUALS, this.AUTHORIZATION_TYPE_REFUND)); query.addCriteria(new MatchCriteria(date, MatchCriteria.GREATEREQUAL, from.getDate().toString())); query.addCriteria(new MatchCriteria(date, MatchCriteria.LESSEQUAL, to.getDate().toString())); System.out.println(query.toString()); return this.idoFindIDsBySQL(query.toString()); }

public Collection ejbFindRefunds(IWTimestamp from, IWTimestamp to) throws FinderException { to.addDays(1); Table table = new Table(this); Column date = new Column(COLUMN_DATE); Column code = new Column(COLUMN_TRANSACTION_TYPE); SelectQuery query = new SelectQuery(table); query.addColumn(new WildCardColumn(table)); query.addCriteria(new MatchCriteria(code, MatchCriteria.EQUALS, this.AUTHORIZATION_TYPE_REFUND)); query.addCriteria(new MatchCriteria(date, MatchCriteria.GREATEREQUAL, from.getDate().toString())); query.addCriteria(new MatchCriteria(date, MatchCriteria.LESSEQUAL, to.getDate().toString())); return this.idoFindIDsBySQL(query.toString()); }

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public void print(){ PrinterJob pj = PrinterJob.getPrinterJob(); pj.setPrintable(new SeismogramPrinter(getDisplayArray(),1)); if(pj.printDialog()){ try { pj.print(); } catch(Exception e){ e.printStackTrace(); } } }

public void print(){ PrinterJob pj = PrinterJob.getPrinterJob(); SeismogramPrinter printer = new SeismogramPrinter(getDisplayArray()); pj.setPrintable(printer); if(pj.printDialog()){ try { pj.print(); } catch(Exception e){ e.printStackTrace(); } } }

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public SeismogramPrinter (BasicSeismogramDisplay[] displays, int seisPerPage){ this.displays = displays; System.out.println("number of displays: " + displays.length + " number of displays per page: " + seisPerPage); this.seisPerPage = seisPerPage; }

public SeismogramPrinter(BasicSeismogramDisplay[] displays){ this.displays = displays; System.out.println("number of displays: " + displays.length + " number of displays per page: " + seisPerPage); this.seisPerPage = seisPerPage; }

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public SeismogramPrinter (BasicSeismogramDisplay[] displays, int seisPerPage){ this.displays = displays; System.out.println("number of displays: " + displays.length + " number of displays per page: " + seisPerPage); this.seisPerPage = seisPerPage; }

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public ATBegin asBegin() throws XTypeMismatch { try { return (ATBegin) meta_respondsTo(AGSymbol.alloc("asBegin")).base_ifTrue_( new JavaClosure(null) { public ATObject meta_apply(NATTable arguments) throws NATException { return NATMirageFactory.createMirageForInterface( meta_invoke(this, AGSymbol.alloc("asBegin"), NATTable.EMPTY), ATBegin.class); } }); } catch (NATException e) { return super.asBegin(); } }

public ATBegin asBegin() throws XTypeMismatch { try { return (ATBegin) meta_respondsTo(AGSymbol.alloc("asBegin")).base_ifTrue_( new JavaClosure(null) { public ATObject meta_apply(NATTable arguments) throws NATException { return NATMirageFactory.createMirageForInterface( this.meta_invoke(this, AGSymbol.alloc("asBegin"), NATTable.EMPTY), ATBegin.class); } }); } catch (NATException e) { return super.asBegin(); } }

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public ATObject meta_apply(NATTable arguments) throws NATException { return NATMirageFactory.createMirageForInterface( meta_invoke(this, AGSymbol.alloc("asBegin"), NATTable.EMPTY), ATBegin.class); }

public ATObject meta_apply(NATTable arguments) throws NATException { return NATMirageFactory.createMirageForInterface( this.meta_invoke(this, AGSymbol.alloc("asBegin"), NATTable.EMPTY), ATBegin.class); }

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public ATBoolean asBoolean() throws XTypeMismatch { try { return (ATBoolean) meta_respondsTo(AGSymbol.alloc("asBoolean")).base_ifTrue_( new JavaClosure(null) { public ATObject meta_apply(NATTable arguments) throws NATException { return NATMirageFactory.createMirageForInterface( meta_invoke(this, AGSymbol.alloc("asBoolean"), NATTable.EMPTY), ATBegin.class); } }); } catch (NATException e) { return super.asBoolean(); } }

public ATBoolean asBoolean() throws XTypeMismatch { try { return (ATBoolean) meta_respondsTo(AGSymbol.alloc("asBoolean")).base_ifTrue_( new JavaClosure(null) { public ATObject meta_apply(NATTable arguments) throws NATException { return NATMirageFactory.createMirageForInterface( this.meta_invoke(this, AGSymbol.alloc("asBoolean"), NATTable.EMPTY), ATBegin.class); } }); } catch (NATException e) { return super.asBoolean(); } }

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public ATObject meta_apply(NATTable arguments) throws NATException { return NATMirageFactory.createMirageForInterface( meta_invoke(this, AGSymbol.alloc("asBoolean"), NATTable.EMPTY), ATBegin.class); }

public ATObject meta_apply(NATTable arguments) throws NATException { return NATMirageFactory.createMirageForInterface( this.meta_invoke(this, AGSymbol.alloc("asBoolean"), NATTable.EMPTY), ATBegin.class); }

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private ATObject createChild(ATClosure code, boolean parentPointerType) throws NATException { NATObject extension = new NATObject( /* dynamic parent */ this, /* lexical parent */ code.getContext().getLexicalScope(), /* parent porinter type */ parentPointerType); ATAbstractGrammar body = code.getMethod().getBody(); body.meta_eval(new NATContext(extension, extension, this)); return extension; }

private ATObject createChild(ATClosure code, boolean parentPointerType) throws NATException { NATObject extension = new NATObject( /* dynamic parent */ this, /* lexical parent */ code.getContext().getLexicalScope(), /* parent porinter type */ parentPointerType); ATAbstractGrammar body = code.getMethod().getBodyExpression(); body.meta_eval(new NATContext(extension, extension, this)); return extension; }

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public void add3CSelection(Selection newSelection){ if(!get3CSelections().contains(newSelection)) get3CSelections().add(newSelection); repaint(); }

public void add3CSelection(Selection newSelection){ if(!get3CSelections().contains(newSelection)){ get3CSelections().add(newSelection); repaint(); }

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public void add3CSelection(Selection newSelection){ if(!get3CSelections().contains(newSelection)) get3CSelections().add(newSelection); repaint(); }

public void add3CSelection(Selection newSelection){ if(!get3CSelections().contains(newSelection)) get3CSelections().add(newSelection); selection3CCount++; repaint(); } }

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public void addSelection(Selection newSelection){ if(!getSelections().contains(newSelection)) getSelections().add(newSelection); repaint(); }

public void addSelection(Selection newSelection){ if(!getSelections().contains(newSelection)){ getSelections().add(newSelection); repaint(); }

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public void addSelection(Selection newSelection){ if(!getSelections().contains(newSelection)) getSelections().add(newSelection); repaint(); }

public void addSelection(Selection newSelection){ if(!getSelections().contains(newSelection)) getSelections().add(newSelection); selectionCount++; repaint(); } }

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public LinkedList get3CSelections(){ return (LinkedList)plotters.subList(plotters.size() - selection3CCount, plotters.size()); }

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public LinkedList getAllSelections(){ return (LinkedList)plotters.subList(plotters.size() - selectionCount - selection3CCount, plotters.size()); }

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public LinkedList getSelections(){ return (LinkedList)plotters.subList(plotters.size() - selectionCount - selection3CCount, plotters.size()); }

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public void remove3CSelection(Selection oldSelection){ get3CSelections().remove(oldSelection); repaint(); }

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public void removeSelection(Selection oldSelection){ getSelections().remove(oldSelection); repaint(); }

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public void createParticleDisplay(BasicSeismogramDisplay creator, boolean advancedOption){ if(particleAllowed){ if(particleDisplay == null){ logger.debug("creating particle display"); particleWindow = new JFrame(particleWindowName); particleWindow.addWindowListener(new WindowAdapter() { public void windowClosing(WindowEvent e) { particleDisplay.removeAll(); particleDisplays--; } }); particleDisplay = new ParticleMotionDisplay((DataSetSeismogram)creator.getSeismograms()[0], creator.getRegistrar(), advancedOption); JPanel displayPanel = new JPanel(); JButton zoomIn = new JButton("zoomIn"); JButton zoomOut = new JButton("zoomOut"); JPanel buttonPanel = new JPanel(); buttonPanel.setLayout(new FlowLayout()); buttonPanel.add(zoomIn); buttonPanel.add(zoomOut); displayPanel.setLayout(new BorderLayout()); displayPanel.add(particleDisplay, java.awt.BorderLayout.CENTER); displayPanel.add(buttonPanel, java.awt.BorderLayout.SOUTH); java.awt.Dimension size = new java.awt.Dimension(400, 400); displayPanel.setSize(size); particleWindow.getContentPane().add(displayPanel); particleWindow.addWindowListener(new WindowAdapter() { public void windowClosing(WindowEvent e) { particleWindow.dispose(); particleDisplay = null; } }); particleWindow.setSize(size); zoomIn.addActionListener(new ActionListener() { public void actionPerformed(ActionEvent ae) { particleDisplay.setZoomIn(true); // particleDisplay.setZoomOut(false); } }); zoomOut.addActionListener(new ActionListener() { public void actionPerformed(ActionEvent ae) { particleDisplay.setZoomOut(true); // particleDisplay.setZoomIn(false); } }); Toolkit tk = Toolkit.getDefaultToolkit(); if(particleWindow.getSize().width*particleDisplays < tk.getScreenSize().width){ particleWindow.setLocation(particleWindow.getSize().width * particleDisplays, tk.getScreenSize().height - particleWindow.getSize().width); }else{ particleWindow.setLocation(tk.getScreenSize().width - particleWindow.getSize().width, tk.getScreenSize().height - particleWindow.getSize().height); } particleDisplays++; particleWindow.setVisible(true); }else { particleDisplay.addParticleMotionDisplay((DataSetSeismogram)creator.getSeismograms()[0], creator.getRegistrar()); particleWindow.toFront(); } // end of else }else{ JOptionPane.showMessageDialog(null, "Particle motion isn't allowed from this display!", "Particle Motion Display Creation", JOptionPane.ERROR_MESSAGE); } }

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public UnitRangeImpl getAmpRange(){ return ampConfig.getAmpRange(); }

public UnitRangeImpl getAmpRange(DataSetSeismogram seis){ return ampConfig.getAmpRange(seis); }

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public ComponentPrintable (Component c){ mComponent = c; System.out.println("set waiting"); mComponent.setSize(new Dimension(648, 468)); }

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public void removeAll(){ logger.debug("removing all displays"); if(parent != null){ parent.removeSelectionDisplay(this); } super.removeAll(); basicDisplays.clear(); sorter = new SeismogramSorter(); globalRegistrar = null; this.time.setText(" Time: "); this.amp.setText(" Amplitude: "); if(selectionDisplay != null){ selectionDisplay.removeAll(); selectionWindow.dispose(); selectionDisplay = null; } if(threeSelectionDisplay != null){ threeSelectionDisplay.removeAll(); threeSelectionWindow.dispose(); selectionDisplay = null; } if(particleDisplay != null){ particleWindow.dispose(); particleDisplays--; particleDisplay.removeAll(); particleDisplay = null; } repaint(); }

public void removeAll(){ logger.debug("removing all displays"); if(parent != null){ parent.removeSelectionDisplay(this); } super.removeAll(); basicDisplays.clear(); sorter = new SeismogramSorter(); globalRegistrar = null; this.time.setText(" Time: "); this.amp.setText(" Amplitude: "); if(selectionDisplay != null){ selectionDisplay.removeAll(); if(selectionWindow != null){ selectionWindow.dispose(); } selectionDisplay = null; } if(threeSelectionDisplay != null){ threeSelectionDisplay.removeAll(); threeSelectionWindow.dispose(); selectionDisplay = null; } if(particleDisplay != null){ particleWindow.dispose(); particleDisplays--; particleDisplay.removeAll(); particleDisplay = null; } repaint(); }

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public void removeAll(){ logger.debug("removing all displays"); if(parent != null){ parent.removeSelectionDisplay(this); } super.removeAll(); basicDisplays.clear(); sorter = new SeismogramSorter(); globalRegistrar = null; this.time.setText(" Time: "); this.amp.setText(" Amplitude: "); if(selectionDisplay != null){ selectionDisplay.removeAll(); selectionWindow.dispose(); selectionDisplay = null; } if(threeSelectionDisplay != null){ threeSelectionDisplay.removeAll(); threeSelectionWindow.dispose(); selectionDisplay = null; } if(particleDisplay != null){ particleWindow.dispose(); particleDisplays--; particleDisplay.removeAll(); particleDisplay = null; } repaint(); }

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public boolean equals(Object obj) { if(super.equals(obj)) { return true; } if(obj instanceof SacPoleZero) { SacPoleZero spz = (SacPoleZero)obj; if(spz.constant != constant || spz.poles.length != poles.length || spz.zeros.length != zeros.length) { return false; } else { for(int i = 0; i < poles.length; i++) { if(spz.poles[i].i != poles[i].i || spz.poles[i].r != poles[i].r) { return false; } } for(int i = 0; i < zeros.length; i++) { if(spz.zeros[i].i != zeros[i].i || spz.zeros[i].r != zeros[i].r) { return false; } } return true; } } else { return false; } }

public boolean equals(Object obj) { if(super.equals(obj)) { return true; } if(obj instanceof SacPoleZero) { SacPoleZero spz = (SacPoleZero)obj; if((Math.abs(spz.constant - constant) / constant) > .001) { System.out.println("const not equal"); return false; } else if(spz.poles.length != poles.length || spz.zeros.length != zeros.length) { return false; } else { for(int i = 0; i < poles.length; i++) { if(spz.poles[i].i != poles[i].i || spz.poles[i].r != poles[i].r) { return false; } } for(int i = 0; i < zeros.length; i++) { if(spz.zeros[i].i != zeros[i].i || spz.zeros[i].r != zeros[i].r) { return false; } } return true; } } else { return false; } }

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public static SacPoleZero read(BufferedReader in) throws IOException { ArrayList lines = new ArrayList(); String s; while((s = in.readLine()) != null) { lines.add(s); } Cmplx[] poles = new Cmplx[0]; Cmplx[] zeros = new Cmplx[0]; float constant = 1; Iterator it = lines.iterator(); while(it.hasNext()) { String line = (String)it.next(); if(line.startsWith(POLES)) { String num = line.substring(POLES.length()).trim(); int numPoles = Integer.parseInt(num); poles = initCmplx(numPoles); for(int i = 0; i < poles.length && it.hasNext(); i++) { line = (String)it.next(); if(line.matches("^-?\\d+\\.\\d+\\s+-?\\d+\\.\\d+\\s+")) { poles[i] = parseCmplx(line); } else { break; } } } else if(line.startsWith(ZEROS)) { String num = line.substring(ZEROS.length()).trim(); int numZeros = Integer.parseInt(num); zeros = initCmplx(numZeros); for(int i = 0; i < zeros.length && it.hasNext(); i++) { line = (String)it.next(); if(line.matches("^-?\\d+\\.\\d+\\s+-?\\d+\\.\\d+\\s+")) { zeros[i] = parseCmplx(line); } else { break; } } } else if(line.startsWith(CONSTANT)) { line = line.replaceAll("\\s+", " "); String[] sline = line.split(" "); constant = Float.parseFloat(sline[1]); } } return new SacPoleZero(poles, zeros, constant); }

public static SacPoleZero read(BufferedReader in) throws IOException { ArrayList lines = new ArrayList(); String s; while((s = in.readLine()) != null) { lines.add(s.trim()); } Cmplx[] poles = new Cmplx[0]; Cmplx[] zeros = new Cmplx[0]; float constant = 1; Iterator it = lines.iterator(); while(it.hasNext()) { String line = (String)it.next(); if(line.startsWith(POLES)) { String num = line.substring(POLES.length()).trim(); int numPoles = Integer.parseInt(num); poles = initCmplx(numPoles); for(int i = 0; i < poles.length && it.hasNext(); i++) { line = (String)it.next(); if(line.matches("^-?\\d+\\.\\d+\\s+-?\\d+\\.\\d+\\s+")) { poles[i] = parseCmplx(line); } else { break; } } } else if(line.startsWith(ZEROS)) { String num = line.substring(ZEROS.length()).trim(); int numZeros = Integer.parseInt(num); zeros = initCmplx(numZeros); for(int i = 0; i < zeros.length && it.hasNext(); i++) { line = (String)it.next(); if(line.matches("^-?\\d+\\.\\d+\\s+-?\\d+\\.\\d+\\s+")) { zeros[i] = parseCmplx(line); } else { break; } } } else if(line.startsWith(CONSTANT)) { line = line.replaceAll("\\s+", " "); String[] sline = line.split(" "); constant = Float.parseFloat(sline[1]); } } return new SacPoleZero(poles, zeros, constant); }

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public static SacPoleZero read(BufferedReader in) throws IOException { ArrayList lines = new ArrayList(); String s; while((s = in.readLine()) != null) { lines.add(s); } Cmplx[] poles = new Cmplx[0]; Cmplx[] zeros = new Cmplx[0]; float constant = 1; Iterator it = lines.iterator(); while(it.hasNext()) { String line = (String)it.next(); if(line.startsWith(POLES)) { String num = line.substring(POLES.length()).trim(); int numPoles = Integer.parseInt(num); poles = initCmplx(numPoles); for(int i = 0; i < poles.length && it.hasNext(); i++) { line = (String)it.next(); if(line.matches("^-?\\d+\\.\\d+\\s+-?\\d+\\.\\d+\\s+")) { poles[i] = parseCmplx(line); } else { break; } } } else if(line.startsWith(ZEROS)) { String num = line.substring(ZEROS.length()).trim(); int numZeros = Integer.parseInt(num); zeros = initCmplx(numZeros); for(int i = 0; i < zeros.length && it.hasNext(); i++) { line = (String)it.next(); if(line.matches("^-?\\d+\\.\\d+\\s+-?\\d+\\.\\d+\\s+")) { zeros[i] = parseCmplx(line); } else { break; } } } else if(line.startsWith(CONSTANT)) { line = line.replaceAll("\\s+", " "); String[] sline = line.split(" "); constant = Float.parseFloat(sline[1]); } } return new SacPoleZero(poles, zeros, constant); }

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public static SacPoleZero read(BufferedReader in) throws IOException { ArrayList lines = new ArrayList(); String s; while((s = in.readLine()) != null) { lines.add(s); } Cmplx[] poles = new Cmplx[0]; Cmplx[] zeros = new Cmplx[0]; float constant = 1; Iterator it = lines.iterator(); while(it.hasNext()) { String line = (String)it.next(); if(line.startsWith(POLES)) { String num = line.substring(POLES.length()).trim(); int numPoles = Integer.parseInt(num); poles = initCmplx(numPoles); for(int i = 0; i < poles.length && it.hasNext(); i++) { line = (String)it.next(); if(line.matches("^-?\\d+\\.\\d+\\s+-?\\d+\\.\\d+\\s+")) { poles[i] = parseCmplx(line); } else { break; } } } else if(line.startsWith(ZEROS)) { String num = line.substring(ZEROS.length()).trim(); int numZeros = Integer.parseInt(num); zeros = initCmplx(numZeros); for(int i = 0; i < zeros.length && it.hasNext(); i++) { line = (String)it.next(); if(line.matches("^-?\\d+\\.\\d+\\s+-?\\d+\\.\\d+\\s+")) { zeros[i] = parseCmplx(line); } else { break; } } } else if(line.startsWith(CONSTANT)) { line = line.replaceAll("\\s+", " "); String[] sline = line.split(" "); constant = Float.parseFloat(sline[1]); } } return new SacPoleZero(poles, zeros, constant); }

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public Cmplx(double re, double im) { this.r = re; this.i = im; }

Cmplx() { this.r = re; this.i = im; }

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public Cmplx(double re, double im) { this.r = re; this.i = im; }

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public static final Cmplx sub(Cmplx a, Cmplx b) { Cmplx c = new Cmplx(); c.r = a.r - b.r; c.i = a.i - b.i; return c; }

public static final Cmplx sub(double a, Cmplx b) { Cmplx c = new Cmplx(); c.r = a.r - b.r; c.i = a.i - b.i; return c; }

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public static final Cmplx sub(Cmplx a, Cmplx b) { Cmplx c = new Cmplx(); c.r = a.r - b.r; c.i = a.i - b.i; return c; }

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public static final Cmplx mul(Cmplx a, Cmplx b) { Cmplx c = new Cmplx(); c.r = a.r * b.r - a.i * b.i; c.i = a.i * b.r + a.r * b.i; return c; }

public static final Cmplx mul(double a, Cmplx b) { Cmplx c = new Cmplx(); c.r = a.r * b.r - a.i * b.i; c.i = a.i * b.r + a.r * b.i; return c; }

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public static final Cmplx mul(Cmplx a, Cmplx b) { Cmplx c = new Cmplx(); c.r = a.r * b.r - a.i * b.i; c.i = a.i * b.r + a.r * b.i; return c; }

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public static final Cmplx div(Cmplx a, Cmplx b) { Cmplx c = new Cmplx(); double r, den; if (Math.abs(b.r) >= Math.abs(b.i)) { r = b.i / b.r; den = b.r + r * b.i; c.r = (a.r + r * a.i) / den; c.i = (a.i - r * a.r) / den; } else { r = b.r / b.i; den = b.i + r * b.r; c.r = (a.r * r + a.i) / den; c.i = (a.i * r - a.r) / den; } return c; }

public static final Cmplx div(double a, Cmplx b) { Cmplx c = new Cmplx(); double r, den; if (Math.abs(b.r) >= Math.abs(b.i)) { r = b.i / b.r; den = b.r + r * b.i; c.r = (a.r + r * a.i) / den; c.i = (a.i - r * a.r) / den; } else { r = b.r / b.i; den = b.i + r * b.r; c.r = (a.r * r + a.i) / den; c.i = (a.i * r - a.r) / den; } return c; }

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public static final Cmplx div(Cmplx a, Cmplx b) { Cmplx c = new Cmplx(); double r, den; if (Math.abs(b.r) >= Math.abs(b.i)) { r = b.i / b.r; den = b.r + r * b.i; c.r = (a.r + r * a.i) / den; c.i = (a.i - r * a.r) / den; } else { r = b.r / b.i; den = b.i + r * b.r; c.r = (a.r * r + a.i) / den; c.i = (a.i * r - a.r) / den; } return c; }

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public static Calendar getCalendar(String val) throws CalFacadeException { try { CalendarBuilder bldr = new CalendarBuilder(new CalendarParserImpl()); return bldr.build(new StringReader(val)); } catch (Throwable t) { throw new CalFacadeException(t); } }

public static Calendar getCalendar(String val) throws CalFacadeException { try { CalendarBuilder bldr = new CalendarBuilder(new CalendarParserImpl()); return bldr.build(new StringReader(val), true); } catch (Throwable t) { throw new CalFacadeException(t); } }

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public Collection toVEvent(String val) throws CalFacadeException { try { CalendarBuilder bldr = new CalendarBuilder(new CalendarParserImpl()); Calendar cal = bldr.build(new StringReader(val)); Vector evs = new Vector(); if (cal == null) { return evs; } ComponentList clist = cal.getComponents(); Iterator it = clist.iterator(); while (it.hasNext()) { Object o = it.next(); if (o instanceof VEvent) { evs.add(o); } } return evs; } catch (Throwable t) { throw new CalFacadeException(t); } }

public Collection toVEvent(String val) throws CalFacadeException { try { CalendarBuilder bldr = new CalendarBuilder(new CalendarParserImpl()); Calendar cal = bldr.build(new StringReader(val), true); Vector evs = new Vector(); if (cal == null) { return evs; } ComponentList clist = cal.getComponents(); Iterator it = clist.iterator(); while (it.hasNext()) { Object o = it.next(); if (o instanceof VEvent) { evs.add(o); } } return evs; } catch (Throwable t) { throw new CalFacadeException(t); } }

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public void renderDataForProjection(Projection p, Graphics g){ logger.debug("InformativeShapeLayer: rendering shape layer"); super.renderDataForProjection(p,g); }

public void renderDataForProjection(Projection p, Graphics g){ logger.debug(ExceptionReporterUtils.getMemoryUsage()+" InformativeShapeLayer: rendering shape layer"); super.renderDataForProjection(p,g); }

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public static void main(String[] args) { OpenMap om = new OpenMap("edu/sc/seis/fissuresUtil/data/maps/dcwpo-browse"); om.writeMapToPNG("map.png"); System.out.println("done"); System.exit(0); }

public static void main(String[] args) { OpenMap om = new OpenMap("edu/sc/seis/fissuresUtil/data/maps/dcwpo-browse"); try { om.writeMapToPNG("map.png"); } catch (IOException e) { logger.error("problem saving image to map.png", e); } System.out.println("done"); System.exit(0); }

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public void writeMapToPNG(String filename){ Projection proj = mapBean.getProjection(); int w = proj.getWidth(), h = proj.getHeight(); BufferedImage bi = new BufferedImage(w, h, BufferedImage.TYPE_INT_RGB); Graphics g = bi.getGraphics(); g.setColor(WATER); g.fillRect(0,0,w,h); Layer[] layers = getLayers(); for (int i = layers.length - 1; i >= 0; i--){ layers[i].renderDataForProjection(proj, g); } try { File loc = new File(filename); File temp = File.createTempFile(loc.getName(), null); ImageIO.write(bi, "png", temp); loc.delete(); temp.renameTo(loc); } catch(IOException e) { System.out.println("there was a problem writing the file"); } }

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public void writeMapToPNG(String filename){ Projection proj = mapBean.getProjection(); int w = proj.getWidth(), h = proj.getHeight(); BufferedImage bi = new BufferedImage(w, h, BufferedImage.TYPE_INT_RGB); Graphics g = bi.getGraphics(); g.setColor(WATER); g.fillRect(0,0,w,h); Layer[] layers = getLayers(); for (int i = layers.length - 1; i >= 0; i--){ layers[i].renderDataForProjection(proj, g); } try { File loc = new File(filename); File temp = File.createTempFile(loc.getName(), null); ImageIO.write(bi, "png", temp); loc.delete(); temp.renameTo(loc); } catch(IOException e) { System.out.println("there was a problem writing the file"); } }

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public CurrentTimeFlag (){ super(new MicroSecondDate().add(RTTimeRangeConfig.serverTimeOffset), "Current Time"); }

public CurrentTimeFlag (){ super(ClockUtil.now(), "Current Time"); }

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DCResolver(String serverName) { super("DCResolver"+serverName); this.serverName = serverName; if (serverName.equals("SCEPP")) { sceppDCLoadTime = new MicroSecondDate(); } else if (serverName.equals("BUD")) { budDCLoadTime = new MicroSecondDate(); } else if (serverName.equals("POND")) { pondDCLoadTime = new MicroSecondDate(); } }

DCResolver(String serverName) { super("DCResolver"+serverName); this.serverName = serverName; if (serverName.equals("SCEPP")) { sceppDCLoadTime = ClockUtil.now(); } else if (serverName.equals("BUD")) { budDCLoadTime = new MicroSecondDate(); } else if (serverName.equals("POND")) { pondDCLoadTime = new MicroSecondDate(); } }

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DCResolver(String serverName) { super("DCResolver"+serverName); this.serverName = serverName; if (serverName.equals("SCEPP")) { sceppDCLoadTime = new MicroSecondDate(); } else if (serverName.equals("BUD")) { budDCLoadTime = new MicroSecondDate(); } else if (serverName.equals("POND")) { pondDCLoadTime = new MicroSecondDate(); } }

DCResolver(String serverName) { super("DCResolver"+serverName); this.serverName = serverName; if (serverName.equals("SCEPP")) { sceppDCLoadTime = new MicroSecondDate(); } else if (serverName.equals("BUD")) { budDCLoadTime = ClockUtil.now(); } else if (serverName.equals("POND")) { pondDCLoadTime = new MicroSecondDate(); } }

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DCResolver(String serverName) { super("DCResolver"+serverName); this.serverName = serverName; if (serverName.equals("SCEPP")) { sceppDCLoadTime = new MicroSecondDate(); } else if (serverName.equals("BUD")) { budDCLoadTime = new MicroSecondDate(); } else if (serverName.equals("POND")) { pondDCLoadTime = new MicroSecondDate(); } }

DCResolver(String serverName) { super("DCResolver"+serverName); this.serverName = serverName; if (serverName.equals("SCEPP")) { sceppDCLoadTime = new MicroSecondDate(); } else if (serverName.equals("BUD")) { budDCLoadTime = new MicroSecondDate(); } else if (serverName.equals("POND")) { pondDCLoadTime = ClockUtil.now(); } }

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protected DataCenterOperations getBudDC() { while (budDC == null) { logger.debug("Resolving Bud DataCenter"); TimeInterval delay = budDCLoadTime.difference(new MicroSecondDate()); delay.convertTo(UnitImpl.SECOND); logger.debug("Resolving Bud DataCenter "+delay); if (delay.getValue() > 10) { // max sleep is 10 seconds break; } try { Thread.sleep(500); } catch (InterruptedException e) { } } return budDC; }

protected DataCenterOperations getBudDC() { while (budDC == null) { logger.debug("Resolving Bud DataCenter"); TimeInterval delay = budDCLoadTime.difference(ClockUtil.now()); delay.convertTo(UnitImpl.SECOND); logger.debug("Resolving Bud DataCenter "+delay); if (delay.getValue() > 10) { // max sleep is 10 seconds break; } try { Thread.sleep(500); } catch (InterruptedException e) { } } return budDC; }

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protected DataCenterOperations getPondDC() { while (pondDC == null) { logger.debug("Resolving Pond DataCenter"); TimeInterval delay = pondDCLoadTime.difference(new MicroSecondDate()); delay.convertTo(UnitImpl.SECOND); logger.debug("Resolving Pond DataCenter "+delay); if (delay.getValue() > 10) { // max sleep is 10 seconds break; } try { Thread.sleep(500); } catch (InterruptedException e) { } } return pondDC; }

protected DataCenterOperations getPondDC() { while (pondDC == null) { logger.debug("Resolving Pond DataCenter"); TimeInterval delay = pondDCLoadTime.difference(ClockUtil.now()); delay.convertTo(UnitImpl.SECOND); logger.debug("Resolving Pond DataCenter "+delay); if (delay.getValue() > 10) { // max sleep is 10 seconds break; } try { Thread.sleep(500); } catch (InterruptedException e) { } } return pondDC; }

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protected DataCenterOperations getSceppDC() { logger.debug("Resolving Scepp DataCenter"); while (sceppDC == null) { TimeInterval delay = sceppDCLoadTime.difference(new MicroSecondDate()); delay.convertTo(UnitImpl.SECOND); logger.debug("Resolving Scepp DataCenter "+delay); if (delay.getValue() > 10) { // max sleep is 10 seconds break; } try { Thread.sleep(500); } catch (InterruptedException e) { } } return sceppDC; }

protected DataCenterOperations getSceppDC() { logger.debug("Resolving Scepp DataCenter"); while (sceppDC == null) { TimeInterval delay = sceppDCLoadTime.difference(ClockUtil.now()); delay.convertTo(UnitImpl.SECOND); logger.debug("Resolving Scepp DataCenter "+delay); if (delay.getValue() > 10) { // max sleep is 10 seconds break; } try { Thread.sleep(500); } catch (InterruptedException e) { } } return sceppDC; }

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public NCReader(NetworkAttr net, Map initialLocations) { this.net = net; this.locs = initialLocations; }

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public Element getParamter(String name);

public Object getParamter(String name);

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public MainFrameMenuBar() { // File add(menuFile); menuFile.add(menuItemReinitialize); menuFile.addSeparator(); menuFile.add(menuItemOptions); menuFile.addSeparator(); menuFile.add(menuItemQuit); // Play add(menuPlay); menuPlay.add(menuItemShowUsers); menuPlay.add(menuItemShowGames); menuPlay.addSeparator(); menuPlay.add(menuItemStartNewGame); menuPlay.add(menuItemStartGamePlay); menuPlay.add(menuItemJoinGame); menuPlay.add(menuItemWatchGame); menuPlay.add(menuItemShowGameState); menuPlay.addSeparator(); menuPlay.add(menuItemLeaveGame); // Review add(menuReview); menuReview.add(menuItemBeginning); menuReview.add(menuItemEnd); menuReview.addSeparator(); menuReview.add(menuItemPreviousTurn); menuReview.add(menuItemNextTurn); menuReview.addSeparator(); menuReview.add(menuItemPreviousDecision); menuReview.add(menuItemNextDecision); // Help add(menuHelp); menuHelp.add(menuItemAboutNetAcquire); }

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public MainFrameMenuBar() { // File add(menuFile); menuFile.add(menuItemReinitialize); menuFile.addSeparator(); menuFile.add(menuItemOptions); menuFile.addSeparator(); menuFile.add(menuItemQuit); // Play add(menuPlay); menuPlay.add(menuItemShowUsers); menuPlay.add(menuItemShowGames); menuPlay.addSeparator(); menuPlay.add(menuItemStartNewGame); menuPlay.add(menuItemStartGamePlay); menuPlay.add(menuItemJoinGame); menuPlay.add(menuItemWatchGame); menuPlay.add(menuItemShowGameState); menuPlay.addSeparator(); menuPlay.add(menuItemLeaveGame); // Review add(menuReview); menuReview.add(menuItemBeginning); menuReview.add(menuItemEnd); menuReview.addSeparator(); menuReview.add(menuItemPreviousTurn); menuReview.add(menuItemNextTurn); menuReview.addSeparator(); menuReview.add(menuItemPreviousDecision); menuReview.add(menuItemNextDecision); // Help add(menuHelp); menuHelp.add(menuItemAboutNetAcquire); }

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public MainFrameMenuBar() { // File add(menuFile); menuFile.add(menuItemReinitialize); menuFile.addSeparator(); menuFile.add(menuItemOptions); menuFile.addSeparator(); menuFile.add(menuItemQuit); // Play add(menuPlay); menuPlay.add(menuItemShowUsers); menuPlay.add(menuItemShowGames); menuPlay.addSeparator(); menuPlay.add(menuItemStartNewGame); menuPlay.add(menuItemStartGamePlay); menuPlay.add(menuItemJoinGame); menuPlay.add(menuItemWatchGame); menuPlay.add(menuItemShowGameState); menuPlay.addSeparator(); menuPlay.add(menuItemLeaveGame); // Review add(menuReview); menuReview.add(menuItemBeginning); menuReview.add(menuItemEnd); menuReview.addSeparator(); menuReview.add(menuItemPreviousTurn); menuReview.add(menuItemNextTurn); menuReview.addSeparator(); menuReview.add(menuItemPreviousDecision); menuReview.add(menuItemNextDecision); // Help add(menuHelp); menuHelp.add(menuItemAboutNetAcquire); }

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public void setMode(int mode) { menuItemShowUsers.setEnabled(enablednessInModesMenuItemShowUsers[mode]); menuItemShowGames.setEnabled(enablednessInModesMenuItemShowGames[mode]); menuItemStartNewGame.setEnabled(enablednessInModesMenuItemStartNewGame[mode]); menuItemStartGamePlay.setEnabled(enablednessInModesMenuItemStartGamePlay[mode]); menuItemJoinGame.setEnabled(enablednessInModesMenuItemJoinGame[mode]); menuItemWatchGame.setEnabled(enablednessInModesMenuItemWatchGame[mode]); menuItemShowGameState.setEnabled(enablednessInModesMenuItemShowGameState[mode]); menuItemLeaveGame.setEnabled(enablednessInModesMenuItemLeaveGame[mode]); menuItemBeginning.setEnabled(enablednessInModesMenuItemReviewMode[mode]); menuItemEnd.setEnabled(enablednessInModesMenuItemReviewMode[mode]); menuItemPreviousTurn.setEnabled(enablednessInModesMenuItemReviewMode[mode]); menuItemNextTurn.setEnabled(enablednessInModesMenuItemReviewMode[mode]); menuItemPreviousDecision.setEnabled(enablednessInModesMenuItemReviewMode[mode]); menuItemNextDecision.setEnabled(enablednessInModesMenuItemReviewMode[mode]); }

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public Rectangle getBounds(){ return null; }

public Rectangle getBounds(){ logger.debug("calling getBounds"); return null; }

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public Rectangle2D getBounds2D(){ return null; }

public Rectangle2D getBounds2D(){ logger.debug("calling getBounds2D"); return null; }

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public static Plottable makePlottable(LocalSeismogramImpl seis, MicroSecondTimeRange tr, int pixelsPerDay) throws CodecException { if(tr.getEndTime().before(seis.getEndTime()) || tr.getBeginTime().after(seis.getEndTime())) { int[] empty = new int[0]; return new Plottable(empty, empty); } //Calculating the number of plottable pixels to cover the full time // range double pixelPeriod = 1 / (double)pixelsPerDay;//in days TimeInterval trInt = (TimeInterval)tr.getInterval() .convertTo(UnitImpl.DAY); double exactNumPixels = trInt.divideBy(pixelPeriod).getValue(); //always round up since a partial pixel means the caller requested data // in that pixel int numPixels = (int)Math.ceil(exactNumPixels); TimeInterval pointPeriod = (TimeInterval)seis.getSampling() .getPeriod() .convertTo(UnitImpl.DAY); double pointsPerPixel = pixelPeriod / pointPeriod.getValue(); int startPoint = getPoint(seis, tr.getBeginTime()); int endPoint = startPoint + (int)(pointsPerPixel * numPixels); int startPixel = 0; if(startPoint < 0) { //Requested time begins before seis, scoot up the start pixel up startPixel = (int)Math.floor((startPoint * -1) / pointsPerPixel); numPixels -= startPixel; } if(endPoint > seis.getNumPoints()) { //Requested time ends after seis, scoot the end pixel back int pointShift = endPoint - seis.getNumPoints(); numPixels -= (int)Math.floor(pointShift / pointsPerPixel); endPoint = seis.getNumPoints(); } int[][] pixels = new int[2][numPixels * 2]; int pixelPoint = startPoint < 0 ? 0 : startPoint; for(int i = 0; i < numPixels; i++) { int pos = 2 * i; int nextPos = pos + 1; pixels[0][pos] = startPixel + i; pixels[0][nextPos] = pixels[0][pos]; int nextPixelPoint = startPoint + (int)((pixels[0][pos] + 1) * pointsPerPixel); if(i == numPixels - 1) { nextPixelPoint = endPoint; } QuantityImpl min = seis.getMinValue(pixelPoint, nextPixelPoint); pixels[1][pos] = (int)min.getValue(); QuantityImpl max = seis.getMaxValue(pixelPoint, nextPixelPoint); pixels[1][nextPos] = (int)max.getValue(); pixelPoint = nextPixelPoint; } return new Plottable(pixels[0], pixels[1]); }

public static Plottable makePlottable(LocalSeismogramImpl seis, MicroSecondTimeRange tr, int pixelsPerDay) throws CodecException { if(tr.getEndTime().before(seis.getBeginTime()) || tr.getBeginTime().after(seis.getEndTime())) { int[] empty = new int[0]; return new Plottable(empty, empty); } //Calculating the number of plottable pixels to cover the full time // range double pixelPeriod = 1 / (double)pixelsPerDay;//in days TimeInterval trInt = (TimeInterval)tr.getInterval() .convertTo(UnitImpl.DAY); double exactNumPixels = trInt.divideBy(pixelPeriod).getValue(); //always round up since a partial pixel means the caller requested data // in that pixel int numPixels = (int)Math.ceil(exactNumPixels); TimeInterval pointPeriod = (TimeInterval)seis.getSampling() .getPeriod() .convertTo(UnitImpl.DAY); double pointsPerPixel = pixelPeriod / pointPeriod.getValue(); int startPoint = getPoint(seis, tr.getBeginTime()); int endPoint = startPoint + (int)(pointsPerPixel * numPixels); int startPixel = 0; if(startPoint < 0) { //Requested time begins before seis, scoot up the start pixel up startPixel = (int)Math.floor((startPoint * -1) / pointsPerPixel); numPixels -= startPixel; } if(endPoint > seis.getNumPoints()) { //Requested time ends after seis, scoot the end pixel back int pointShift = endPoint - seis.getNumPoints(); numPixels -= (int)Math.floor(pointShift / pointsPerPixel); endPoint = seis.getNumPoints(); } int[][] pixels = new int[2][numPixels * 2]; int pixelPoint = startPoint < 0 ? 0 : startPoint; for(int i = 0; i < numPixels; i++) { int pos = 2 * i; int nextPos = pos + 1; pixels[0][pos] = startPixel + i; pixels[0][nextPos] = pixels[0][pos]; int nextPixelPoint = startPoint + (int)((pixels[0][pos] + 1) * pointsPerPixel); if(i == numPixels - 1) { nextPixelPoint = endPoint; } QuantityImpl min = seis.getMinValue(pixelPoint, nextPixelPoint); pixels[1][pos] = (int)min.getValue(); QuantityImpl max = seis.getMaxValue(pixelPoint, nextPixelPoint); pixels[1][nextPos] = (int)max.getValue(); pixelPoint = nextPixelPoint; } return new Plottable(pixels[0], pixels[1]); }

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public void getFreeBusy(CaldavCalNode cnode, FreeBusyQuery freeBusy) throws WebdavIntfException { try { String user = cnode.getCDURI().getOwner(); getSvci(); BwFreeBusy fb = freeBusy.getFreeBusy(svci, user); cnode.setFreeBusy(fb); } catch (WebdavIntfException we) { throw we; } catch (Throwable t) { throw new WebdavIntfException(t); } }

public void getFreeBusy(CaldavCalNode cnode, FreeBusyQuery freeBusy) throws WebdavIntfException { try { String user = cnode.getCDURI().getOwner(); getSvci(); BwFreeBusy fb = freeBusy.getFreeBusy(svci, cnode.getCDURI().getCal(), user); cnode.setFreeBusy(fb); } catch (WebdavIntfException we) { throw we; } catch (Throwable t) { throw new WebdavIntfException(t); } }

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public TimeZone getDefaultTimeZone() throws CalFacadeException;

public TimeZone getDefaultTimeZone() throws CalFacadeException { if ((defaultTimeZone == null) && (defaultTimeZoneId != null)) { defaultTimeZone = getTimeZone(defaultTimeZoneId); } return defaultTimeZone; }

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public JDBCTime(Connection conn) throws SQLException{ super("time", conn); seq = new JDBCSequence(conn, "TimeSeq"); if(!DBUtil.tableExists("time", conn)){ conn.createStatement().executeUpdate(ConnMgr.getSQL("time.create")); } getById = conn.prepareStatement("SELECT * FROM time WHERE time_id = ?"); put = conn.prepareStatement("INSERT INTO time " + "(time_id, time_stamp, time_nanos, time_leapsec) " + "VALUES (?, ?, ?, ?)"); getByValues = conn.prepareStatement("SELECT time_id FROM time WHERE time_stamp = ? " + "AND time_nanos = ? AND time_leapsec = ?"); }

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public static GJChronology getInstance( DateTimeZone zone, ReadableInstant gregorianCutover) { return getInstance(zone, gregorianCutover, 4); }

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private void adjustModel() { points = new Vector<Point2D>(); Vector<IdeaView> views = rootView.getSubViews(); createPoints(rootView, ORIGIN); tweakIdeas(views, ORIGIN, 0.0, false); }

private void adjustModel() { points = new Vector<Point2D>(); Vector<IdeaView> views = rootView.getSubViews(); createPoints(rootView, ORIGIN, rootView.getAngle()); tweakIdeas(views, ORIGIN, 0.0, false); }

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private void createPoints(IdeaView parentView, Point2D c) { Vector<IdeaView> views = parentView.getSubViews(); double initAngle = parentView.getAngle(); points.add(ORIGIN); synchronized(views) { for(IdeaView view: views) { Point2D point = getPoint(view, c, initAngle);// if (parentView.isRoot()) {// double x = point.getX();// double y = point.getY();// x += Math.sin(view.getAngle()) * parentView.ROOT_RADIUS;// y += Math.cos(view.getAngle()) * parentView.ROOT_RADIUS;// point = new Point2D.Double(x, y);// } points.add(point); createPoints(view, point); } } }

private void createPoints(IdeaView parentView, Point2D c, double initAngle) { Vector<IdeaView> views = parentView.getSubViews(); double initAngle = parentView.getAngle(); points.add(ORIGIN); synchronized(views) { for(IdeaView view: views) { Point2D point = getPoint(view, c, initAngle);// if (parentView.isRoot()) {// double x = point.getX();// double y = point.getY();// x += Math.sin(view.getAngle()) * parentView.ROOT_RADIUS;// y += Math.cos(view.getAngle()) * parentView.ROOT_RADIUS;// point = new Point2D.Double(x, y);// } points.add(point); createPoints(view, point); } } }

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private void createPoints(IdeaView parentView, Point2D c) { Vector<IdeaView> views = parentView.getSubViews(); double initAngle = parentView.getAngle(); points.add(ORIGIN); synchronized(views) { for(IdeaView view: views) { Point2D point = getPoint(view, c, initAngle);// if (parentView.isRoot()) {// double x = point.getX();// double y = point.getY();// x += Math.sin(view.getAngle()) * parentView.ROOT_RADIUS;// y += Math.cos(view.getAngle()) * parentView.ROOT_RADIUS;// point = new Point2D.Double(x, y);// } points.add(point); createPoints(view, point); } } }

private void createPoints(IdeaView parentView, Point2D c) { Vector<IdeaView> views = parentView.getSubViews(); points.add(ORIGIN); synchronized(views) { for(IdeaView view: views) { Point2D point = getPoint(view, c, initAngle);// if (parentView.isRoot()) {// double x = point.getX();// double y = point.getY();// x += Math.sin(view.getAngle()) * parentView.ROOT_RADIUS;// y += Math.cos(view.getAngle()) * parentView.ROOT_RADIUS;// point = new Point2D.Double(x, y);// } points.add(point); createPoints(view, point); } } }

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private void createPoints(IdeaView parentView, Point2D c) { Vector<IdeaView> views = parentView.getSubViews(); double initAngle = parentView.getAngle(); points.add(ORIGIN); synchronized(views) { for(IdeaView view: views) { Point2D point = getPoint(view, c, initAngle);// if (parentView.isRoot()) {// double x = point.getX();// double y = point.getY();// x += Math.sin(view.getAngle()) * parentView.ROOT_RADIUS;// y += Math.cos(view.getAngle()) * parentView.ROOT_RADIUS;// point = new Point2D.Double(x, y);// } points.add(point); createPoints(view, point); } } }

private void createPoints(IdeaView parentView, Point2D c) { Vector<IdeaView> views = parentView.getSubViews(); double initAngle = parentView.getAngle(); points.add(ORIGIN); synchronized(views) { for(IdeaView view: views) { Point2D point = getPoint(view, c, initAngle);// if (parentView.isRoot()) {// double x = point.getX();// double y = point.getY();// x += Math.sin(view.getAngle()) * parentView.ROOT_RADIUS;// y += Math.cos(view.getAngle()) * parentView.ROOT_RADIUS;// point = new Point2D.Double(x, y);// } points.add(point); createPoints(view, point, initAngle + view.getAngle()); } } }

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private Point2D tweakIdeas(final Vector<IdeaView> views, final Point2D c, final double initAngle, final boolean hasParent) { if (views.size() == 0) { return new Point2D.Double(0.0, 0.0); } double mass = 2000.0 / (points.size() * Math.sqrt((double)points.size())); double totForceX = 0.0; double totForceY = 0.0; if (timeChanged == 0) { timeChanged = System.currentTimeMillis(); } long now = System.currentTimeMillis(); double maxSpeed = 0.0; if ((now - timeChanged) < (MAX_MOVE_TIME_SECS * 1000.0)) { maxSpeed = MAX_SPEED - ((now - timeChanged) * MAX_SPEED / 1000.0 / MAX_MOVE_TIME_SECS); } synchronized(views) { double minDiffAngle = Math.PI / 2 / views.size(); for (int i = 0; i < views.size(); i++) { IdeaView previousView = null; IdeaView nextView = null; IdeaView view = views.get(i); if (i > 0) { previousView = views.get(i - 1); } if (i < views.size() - 1) { nextView = views.get(i + 1); } Point2D point = getPoint(view, c, initAngle); double forceX = 0.0; double forceY = 0.0; for(Point2D other: points) { double dirX = point.getX() - other.getX(); double dirY = point.getY() - other.getY(); double dSquare = point.distanceSq(other); if (dSquare > 0.000001) { double unitFactor = point.distance(other); forceX += (dirX / unitFactor) * (mass * mass / dSquare); if (forceX > 1.0) { forceX = 1.0; } if (forceX < -1.0) { forceX = -1.0; } forceY += (dirY / unitFactor) * (mass * mass / dSquare); if (forceY > 1.0) { forceY = 1.0; } if (forceY < -1.0) { forceY = -1.0; } } } Point2D p2 = getPoint(view, ORIGIN, initAngle); Point2D tf = tweakIdeas(view.getSubViews(), point, view.getAngle(), true); forceX += tf.getX(); forceY += tf.getY(); double sideForce = (p2.getY() * forceX) + (-p2.getX() * forceY); totForceX += forceX; totForceY += forceY; double v = view.getV(); v += sideForce / mass; v *= 0.90; if (v > maxSpeed) { v = maxSpeed; } if (v < -maxSpeed) { v = -maxSpeed; } view.setV(v); double oldAngle = view.getAngle(); double newAngle = oldAngle + (view.getV() / view.getLength()); if (previousView != null) { double previousAngle = previousView.getAngle(); if (previousAngle > newAngle - minDiffAngle) { previousView.setAngle(newAngle - minDiffAngle); newAngle = previousAngle + minDiffAngle; double previousV = previousView.getV(); double diffV = v - previousV; if (diffV > 0) { view.setV(diffV); previousView.setV(-diffV); } else { view.setV(-diffV); previousView.setV(diffV); } v = view.getV(); } } else { double previousAngle = -Math.PI; if (!hasParent) { previousAngle = views.get(views.size() - 1).getAngle() - 2 * Math.PI; } if (previousAngle > newAngle - minDiffAngle) { newAngle = previousAngle + minDiffAngle; double previousV = 0.0; double diffV = v - previousV; if (diffV > 0) { view.setV(diffV); } else { view.setV(-diffV); } v = view.getV(); } } if (nextView != null) { double nextAngle = nextView.getAngle(); if (nextAngle < newAngle + minDiffAngle) { nextView.setAngle(newAngle + minDiffAngle); newAngle = nextAngle - minDiffAngle; double nextV = nextView.getV(); double diffV = 0.0; if (diffV > 0) { view.setV(-diffV); nextView.setV(diffV); } else { view.setV(diffV); nextView.setV(-diffV); } v = view.getV(); } } else { double nextAngle = Math.PI; if (!hasParent) { nextAngle = views.get(0).getAngle() + 2 * Math.PI; } if (nextAngle < newAngle + minDiffAngle) { newAngle = nextAngle - minDiffAngle; double nextV = 0.0; double diffV = 0.0; if (diffV > 0) { view.setV(-diffV); } else { view.setV(diffV); } v = view.getV(); } } view.setAngle(newAngle); } } return new Point2D.Double(totForceX, totForceY); }

private Point2D tweakIdeas(final Vector<IdeaView> views, final Point2D c, final double initAngle, final boolean hasParent) { if (views.size() == 0) { return new Point2D.Double(0.0, 0.0); } double mass = 2000.0 / (points.size() * Math.sqrt((double)points.size())); double totForceX = 0.0; double totForceY = 0.0; if (timeChanged == 0) { timeChanged = System.currentTimeMillis(); } long now = System.currentTimeMillis(); double maxSpeed = 0.0; if ((now - timeChanged) < (MAX_MOVE_TIME_SECS * 1000.0)) { maxSpeed = MAX_SPEED - ((now - timeChanged) * MAX_SPEED / 1000.0 / MAX_MOVE_TIME_SECS); } synchronized(views) { double minDiffAngle = Math.PI / 2 / views.size(); for (int i = 0; i < views.size(); i++) { IdeaView previousView = null; IdeaView nextView = null; IdeaView view = views.get(i); if (i > 0) { previousView = views.get(i - 1); } if (i < views.size() - 1) { nextView = views.get(i + 1); } Point2D point = getPoint(view, c, initAngle); double forceX = 0.0; double forceY = 0.0; for(Point2D other: points) { double dirX = point.getX() - other.getX(); double dirY = point.getY() - other.getY(); double dSquare = point.distanceSq(other); if (dSquare > 0.000001) { double unitFactor = point.distance(other); forceX += (dirX / unitFactor) * (mass * mass / dSquare); if (forceX > 1.0) { forceX = 1.0; } if (forceX < -1.0) { forceX = -1.0; } forceY += (dirY / unitFactor) * (mass * mass / dSquare); if (forceY > 1.0) { forceY = 1.0; } if (forceY < -1.0) { forceY = -1.0; } } } Point2D p2 = getPoint(view, ORIGIN, initAngle); Point2D tf = tweakIdeas(view.getSubViews(), point, view.getAngle() + initAngle, true); forceX += tf.getX(); forceY += tf.getY(); double sideForce = (p2.getY() * forceX) + (-p2.getX() * forceY); totForceX += forceX; totForceY += forceY; double v = view.getV(); v += sideForce / mass; v *= 0.90; if (v > maxSpeed) { v = maxSpeed; } if (v < -maxSpeed) { v = -maxSpeed; } view.setV(v); double oldAngle = view.getAngle(); double newAngle = oldAngle + (view.getV() / view.getLength()); if (previousView != null) { double previousAngle = previousView.getAngle(); if (previousAngle > newAngle - minDiffAngle) { previousView.setAngle(newAngle - minDiffAngle); newAngle = previousAngle + minDiffAngle; double previousV = previousView.getV(); double diffV = v - previousV; if (diffV > 0) { view.setV(diffV); previousView.setV(-diffV); } else { view.setV(-diffV); previousView.setV(diffV); } v = view.getV(); } } else { double previousAngle = -Math.PI; if (!hasParent) { previousAngle = views.get(views.size() - 1).getAngle() - 2 * Math.PI; } if (previousAngle > newAngle - minDiffAngle) { newAngle = previousAngle + minDiffAngle; double previousV = 0.0; double diffV = v - previousV; if (diffV > 0) { view.setV(diffV); } else { view.setV(-diffV); } v = view.getV(); } } if (nextView != null) { double nextAngle = nextView.getAngle(); if (nextAngle < newAngle + minDiffAngle) { nextView.setAngle(newAngle + minDiffAngle); newAngle = nextAngle - minDiffAngle; double nextV = nextView.getV(); double diffV = 0.0; if (diffV > 0) { view.setV(-diffV); nextView.setV(diffV); } else { view.setV(diffV); nextView.setV(-diffV); } v = view.getV(); } } else { double nextAngle = Math.PI; if (!hasParent) { nextAngle = views.get(0).getAngle() + 2 * Math.PI; } if (nextAngle < newAngle + minDiffAngle) { newAngle = nextAngle - minDiffAngle; double nextV = 0.0; double diffV = 0.0; if (diffV > 0) { view.setV(-diffV); } else { view.setV(diffV); } v = view.getV(); } } view.setAngle(newAngle); } } return new Point2D.Double(totForceX, totForceY); }

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public IdeaView(Idea anIdea) { setIdea(anIdea); }

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public String doAction(HttpServletRequest request, HttpServletResponse response, BwSession sess, BwActionFormBase form) throws Throwable { if (form.getGuest()) { return "noAccess"; // First line of defence } FormFile upFile = form.getUploadFile(); if (upFile == null) { // Just forget it return "success"; } String fileName = upFile.getFileName(); if ((fileName == null) || (fileName.length() == 0)) { return null; } InputStream is = upFile.getInputStream(); CalSvcI svci = form.getCalSvcI(); IcalTranslator trans = new IcalTranslator(svci.getIcalCallback(), debug); Collection objs = trans.fromIcal(new InputStreamReader(is)); Iterator it = objs.iterator(); while (it.hasNext()) { Object o = it.next(); if (o instanceof EventInfo) { EventInfo ei = (EventInfo)o; BwEvent ev = ei.getEvent(); if (ei.getNewEvent()) { svci.addEvent(ev, ei.getOverrides()); } else { svci.updateEvent(ev); } } } form.getMsg().emit("org.bedework.message.event.added"); return "success"; }

public String doAction(HttpServletRequest request, HttpServletResponse response, BwSession sess, BwActionFormBase form) throws Throwable { if (form.getGuest()) { return "noAccess"; // First line of defence } FormFile upFile = form.getUploadFile(); if (upFile == null) { // Just forget it return "success"; } String fileName = upFile.getFileName(); if ((fileName == null) || (fileName.length() == 0)) { return null; } InputStream is = upFile.getInputStream(); CalSvcI svci = form.getCalSvcI(); IcalTranslator trans = new IcalTranslator(svci.getIcalCallback(), debug); Collection objs = trans.fromIcal(new InputStreamReader(is)); Iterator it = objs.iterator(); while (it.hasNext()) { Object o = it.next(); if (o instanceof EventInfo) { EventInfo ei = (EventInfo)o; BwEvent ev = ei.getEvent(); if (ei.getNewEvent()) { svci.addEvent(ev, ei.getOverrides()); } else { svci.updateEvent(ev); } } } form.getMsg().emit("org.bedework.client.message.event.added"); return "success"; }

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protected void createDefaultEditPolicies() { super.createDefaultEditPolicies(); installEditPolicy(EditPolicy.PRIMARY_DRAG_ROLE, new ResizableCompartmentEditPolicy()); installEditPolicy(EditPolicyRoles.SEMANTIC_ROLE, new RegionSubverticesItemSemanticEditPolicy()); installEditPolicy(EditPolicyRoles.CREATION_ROLE, new CreationEditPolicy()); installEditPolicy(EditPolicyRoles.DRAG_DROP_ROLE, new DragDropEditPolicy()); installEditPolicy(EditPolicyRoles.CANONICAL_ROLE, new RegionSubverticesCanonicalEditPolicy()); }

protected void createDefaultEditPolicies() { super.createDefaultEditPolicies(); installEditPolicy(EditPolicyRoles.SEMANTIC_ROLE, new RegionSubverticesItemSemanticEditPolicy()); installEditPolicy(EditPolicyRoles.CREATION_ROLE, new CreationEditPolicy()); installEditPolicy(EditPolicyRoles.DRAG_DROP_ROLE, new DragDropEditPolicy()); installEditPolicy(EditPolicyRoles.CANONICAL_ROLE, new RegionSubverticesCanonicalEditPolicy()); }

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public void addSeismogram(DataSetSeismogram newSeismogram){ seismos.add(newSeismogram); SeismogramPlotter newPlotter = new SeismogramPlotter(newSeismogram.getSeismogram(), timeRegistrar, ampRegistrar); Iterator e = filters.iterator(); seisPlotters.put(newPlotter, seisColors[seisPlotters.size()%seisColors.length]); while(e.hasNext()){ filterPlotters.put(new FilteredSeismogramPlotter(((ButterworthFilter)e.next()), newSeismogram.getSeismogram(), timeRegistrar, ampRegistrar), filterColors[filterPlotters.size()%filterColors.length]); } timeRegistrar.addSeismogram(newSeismogram.getSeismogram()); ampRegistrar.addSeismogram(newSeismogram.getSeismogram()); redo = true; }

public void addSeismogram(DataSetSeismogram newSeismogram){ seismos.add(newSeismogram); SeismogramPlotter newPlotter = new SeismogramPlotter(newSeismogram.getSeismogram(), timeRegistrar, ampRegistrar); Iterator e = filters.iterator(); if(autoColor) seisPlotters.put(newPlotter, seisColors[seisPlotters.size()%seisColors.length]); else seisPlotters.put(newPlotter, Color.blue); while(e.hasNext()){ filterPlotters.put(new FilteredSeismogramPlotter(((ButterworthFilter)e.next()), newSeismogram.getSeismogram(), timeRegistrar, ampRegistrar), filterColors[filterPlotters.size()%filterColors.length]); } timeRegistrar.addSeismogram(newSeismogram.getSeismogram()); ampRegistrar.addSeismogram(newSeismogram.getSeismogram()); redo = true; }

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public int find(String file, TimeRange fileTimeWindow) throws RT130FormatException, IOException { return rtFileReader.processRT130Data(file, false, fileTimeWindow)[0].sample_rate; }

public int find(String file, MicroSecondTimeRange fileTimeWindow) throws RT130FormatException, IOException { return rtFileReader.processRT130Data(file, false, fileTimeWindow)[0].sample_rate; }

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public void addSubscription(BwSubscription val) throws CalFacadeException { BwPreferences prefs = getPreferences(); checkOwnerOrSuper(prefs); setupOwnedEntity(val); val = (BwSubscription)val.clone(); // Avoid hibernate prefs.addSubscription(val); dbi.updatePreferences(prefs); }

public void addSubscription(BwSubscription val) throws CalFacadeException { BwPreferences prefs = getPreferences(); checkOwnerOrSuper(prefs); setupOwnedEntity(val); // Avoid hibernate prefs.addSubscription(val); dbi.updatePreferences(prefs); }

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public void addSubscription(BwSubscription val) throws CalFacadeException { BwPreferences prefs = getPreferences(); checkOwnerOrSuper(prefs); setupOwnedEntity(val); val = (BwSubscription)val.clone(); // Avoid hibernate prefs.addSubscription(val); dbi.updatePreferences(prefs); }

public void addSubscription(BwSubscription val) throws CalFacadeException { BwPreferences prefs = getPreferences(); checkOwnerOrSuper(prefs); setupOwnedEntity(val); val = (BwSubscription)val.clone(); // Avoid hibernate prefs.addSubscription(val); }

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public double[] acf(int maxlag) { if (autocorrelation.length < maxlag+1) { double[] tmp = new double[maxlag+1]; System.arraycopy(autocorrelation, 0, tmp, 0, autocorrelation.length); double normalizer = binarySumDevSqr(0, getLength(), mean()); for (int i=autocorrelation.length; i< maxlag+1; i++) { tmp[i] = binarySumDevLag(0, getLength(), mean(), i) / normalizer; } autocorrelation = tmp; } return autocorrelation; }

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