Biological Process stringlengths 7 1.01k | Cellular Component stringlengths 6 867 | Molecular Function stringlengths 11 871 | Organism stringlengths 8 73 | Keywords stringlengths 1 810 | Sequence 10 stringlengths 5 10 | Sequence stringlengths 5 1.02k | Combined stringlengths 136 3.91k |
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de novo' pyrimidine nucleobase biosynthetic process 'de novo' UMP biosynthetic process pyrimidine nucleotide biosynthetic process pyrimidine ribonucleoside biosynthetic process | cytoplasm; cytosol | magnesium ion binding orotate phosphoribosyltransferase activity protein homodimerization activity | Escherichia coli | 3D-structure Direct protein sequencing Glycosyltransferase Magnesium Pyrimidine biosynthesis Reference proteome Transferase | MKPYQRQFIE | MKPYQRQFIEFALSKQVLKFGEFTLKSGRKSPYFFNAGLFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDLDLPYCFNRKEAKDHGEGGNLVGSALQGRVMLVDDVITAGTAIRESMEIIQANGATLAGVLISLDRQERGRGEISAIQEVERDYNCKVISIITLKDLIAYLEEKPEMAEHLAAVKAYREEFGV | de novo' pyrimidine nucleobase biosynthetic process 'de novo' UMP biosynthetic process pyrimidine nucleotide biosynthetic process pyrimidine ribonucleoside biosynthetic process cytoplasm; cytosol magnesium ion binding orotate phosphoribosyltransferase activity protein homodimerization activity Escherichia coli 3D-structure Direct protein sequencing Glycosyltransferase Magnesium Pyrimidine biosynthesis Reference proteome Transferase MKPYQRQFIE MKPYQRQFIEFALSKQVLKFGEFTLKSGRKSPYFFNAGLFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDLDLPYCFNRKEAKDHGEGGNLVGSALQGRVMLVDDVITAGTAIRESMEIIQANGATLAGVLISLDRQERGRGEISAIQEVERDYNCKVISIITLKDLIAYLEEKPEMAEHLAAVKAYREEFGV |
de novo' CTP biosynthetic process CTP biosynthetic process glutamine metabolic process protein homotetramerization pyrimidine nucleobase biosynthetic process | cytoophidium; cytosol; protein-containing complex | ATP binding CTP synthase activity glutaminase activity identical protein binding magnesium ion binding | Escherichia coli | 3D-structure ATP-binding Cytoplasm Direct protein sequencing Glutamine amidotransferase Ligase Magnesium Metal-binding Nucleotide-binding Pyrimidine biosynthesis Reference proteome | MTTNYIFVTG | MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK | de novo' CTP biosynthetic process CTP biosynthetic process glutamine metabolic process protein homotetramerization pyrimidine nucleobase biosynthetic process cytoophidium; cytosol; protein-containing complex ATP binding CTP synthase activity glutaminase activity identical protein binding magnesium ion binding Escherichia coli 3D-structure ATP-binding Cytoplasm Direct protein sequencing Glutamine amidotransferase Ligase Magnesium Metal-binding Nucleotide-binding Pyrimidine biosynthesis Reference proteome MTTNYIFVTG MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK |
de novo' CTP biosynthetic process phosphorylation pyrimidine nucleotide biosynthetic process UDP biosynthetic process | cytosol | ATP binding identical protein binding UMP kinase activity | Escherichia coli | 3D-structure Allosteric enzyme ATP-binding Cytoplasm Direct protein sequencing Kinase Nucleotide-binding Pyrimidine biosynthesis Reference proteome Transferase | MATNAKPVYK | MATNAKPVYKRILLKLSGEALQGTEGFGIDASILDRMAQEIKELVELGIQVGVVIGGGNLFRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNARLMSAIPLNGVCDSYSWAEAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADVVLKATKVDGVFTADPAKDPTATMYEQLTYSEVLEKELKVMDLAAFTLARDHKLPIRVFNMNKPGALRRVVMGEKEGTLITE | de novo' CTP biosynthetic process phosphorylation pyrimidine nucleotide biosynthetic process UDP biosynthetic process cytosol ATP binding identical protein binding UMP kinase activity Escherichia coli 3D-structure Allosteric enzyme ATP-binding Cytoplasm Direct protein sequencing Kinase Nucleotide-binding Pyrimidine biosynthesis Reference proteome Transferase MATNAKPVYK MATNAKPVYKRILLKLSGEALQGTEGFGIDASILDRMAQEIKELVELGIQVGVVIGGGNLFRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNARLMSAIPLNGVCDSYSWAEAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADVVLKATKVDGVFTADPAKDPTATMYEQLTYSEVLEKELKVMDLAAFTLARDHKLPIRVFNMNKPGALRRVVMGEKEGTLITE |
self proteolysis spermidine biosynthetic process | cytosol | adenosylmethionine decarboxylase activity magnesium ion binding | Escherichia coli | Allosteric enzyme Autocatalytic cleavage Decarboxylase Direct protein sequencing Lyase Magnesium Polyamine biosynthesis Pyruvate Reference proteome S-adenosyl-L-methionine Schiff base Spermidine biosynthesis Zymogen | MKKLKLHGFN | MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYNANRLTEILSETCSIIGANILNIARQDYEPQGASVTILVSEEPVDPKLIDKTEHPGPLPETVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDIVTIDYRVRGFTRDINGMKHFIDHEINSIQNFMSDDMKALYDMVDVNVYQENIFHTKMLLKEFDLKHYMFHTKPEDLTDSERQEITAALWKEMREIYYGRNMPAV | self proteolysis spermidine biosynthetic process cytosol adenosylmethionine decarboxylase activity magnesium ion binding Escherichia coli Allosteric enzyme Autocatalytic cleavage Decarboxylase Direct protein sequencing Lyase Magnesium Polyamine biosynthesis Pyruvate Reference proteome S-adenosyl-L-methionine Schiff base Spermidine biosynthesis Zymogen MKKLKLHGFN MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYNANRLTEILSETCSIIGANILNIARQDYEPQGASVTILVSEEPVDPKLIDKTEHPGPLPETVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDIVTIDYRVRGFTRDINGMKHFIDHEINSIQNFMSDDMKALYDMVDVNVYQENIFHTKMLLKEFDLKHYMFHTKPEDLTDSERQEITAALWKEMREIYYGRNMPAV |
queuosine biosynthetic process response to radiation tRNA wobble guanine modification | cytosol | S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity | Escherichia coli | Cytoplasm Queuosine biosynthesis Reference proteome S-adenosyl-L-methionine Transferase | MRVTDFSFEL | MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFTDLLDKLNPGDLLVFNNTRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDDESINATMTARHGALFEVEFNDERSVLDILNSIGHMPLPPYIDRPDEDADRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFITYNPQAINERVGE | queuosine biosynthetic process response to radiation tRNA wobble guanine modification cytosol S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity Escherichia coli Cytoplasm Queuosine biosynthesis Reference proteome S-adenosyl-L-methionine Transferase MRVTDFSFEL MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFTDLLDKLNPGDLLVFNNTRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDDESINATMTARHGALFEVEFNDERSVLDILNSIGHMPLPPYIDRPDEDADRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFITYNPQAINERVGE |
DNA damage response maturation of SSU-rRNA response to cold ribosomal small subunit biogenesis ribosome biogenesis | cytosol | ribosomal small subunit binding | Escherichia coli | 3D-structure Cytoplasm Direct protein sequencing Reference proteome Ribosome biogenesis Stress response | MAKEFGRPQR | MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVNPDDSKED | DNA damage response maturation of SSU-rRNA response to cold ribosomal small subunit biogenesis ribosome biogenesis cytosol ribosomal small subunit binding Escherichia coli 3D-structure Cytoplasm Direct protein sequencing Reference proteome Ribosome biogenesis Stress response MAKEFGRPQR MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVNPDDSKED |
cell motility DNA damage response DNA recombination homologous recombination recombinational repair response to ionizing radiation SOS response translesion synthesis | cytoplasm; DNA polymerase V complex | ATP binding ATP hydrolysis activity ATP-dependent activity, acting on DNA ATP-dependent DNA damage sensor activity damaged DNA binding DNA-binding transcription factor binding single-stranded DNA binding | Escherichia coli | 3D-structure ATP-binding Cytoplasm Direct protein sequencing DNA damage DNA recombination DNA repair DNA-binding Nucleotide-binding Reference proteome SOS response Stress response | MAIDENKQKA | MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVGSETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEIEKKVRELLLSNPNSTPDFSVDDSEGVAETNEDF | cell motility DNA damage response DNA recombination homologous recombination recombinational repair response to ionizing radiation SOS response translesion synthesis cytoplasm; DNA polymerase V complex ATP binding ATP hydrolysis activity ATP-dependent activity, acting on DNA ATP-dependent DNA damage sensor activity damaged DNA binding DNA-binding transcription factor binding single-stranded DNA binding Escherichia coli 3D-structure ATP-binding Cytoplasm Direct protein sequencing DNA damage DNA recombination DNA repair DNA-binding Nucleotide-binding Reference proteome SOS response Stress response MAIDENKQKA MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVGSETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEIEKKVRELLLSNPNSTPDFSVDDSEGVAETNEDF |
maintenance of translational fidelity regulation of translational termination translational termination | cytosol | GDP binding GTP binding GTPase activity guanosine tetraphosphate binding translation release factor activity, codon nonspecific translation release factor activity, codon specific | Escherichia coli | 3D-structure Cytoplasm Direct protein sequencing GTP-binding Nucleotide-binding Protein biosynthesis Reference proteome | MTLSPYLQEV | MTLSPYLQEVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAGTVKGRGSNQHAKSDWMEMEKQRGISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKGVEDRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVENELKIGCAPITWPIGCGKLFKGVYHLYKDETYLYQSGKGHTIQEVRIVKGLNNPDLDAAVGEDLAQQLRDELELVKGASNEFDKELFLAGEITPVFFGTALGNFGVDHMLDGLVEWAPAPMPRQTDTRTVEASEDKFTGFVFKIQANMDPKHRDRVAFMRVVSGKYEKGMKLRQVRTAKDVVISDALTFMAGDRSHVEEAYPGDILGLHNHGTIQIGDTFTQGEMMKFTGIPNFAPELFRRIRLKDPLKQKQLLKGLVQLSEEGAVQVFRPISNNDLIVGAVGVLQFDVVVARLKSEYNVEAVYESVNVATARWVECADAKKFEEFKRKNESQLALDGGDNLAYIATSMVNLRLAQERYPDVQFHQTREH | maintenance of translational fidelity regulation of translational termination translational termination cytosol GDP binding GTP binding GTPase activity guanosine tetraphosphate binding translation release factor activity, codon nonspecific translation release factor activity, codon specific Escherichia coli 3D-structure Cytoplasm Direct protein sequencing GTP-binding Nucleotide-binding Protein biosynthesis Reference proteome MTLSPYLQEV MTLSPYLQEVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAGTVKGRGSNQHAKSDWMEMEKQRGISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKGVEDRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVENELKIGCAPITWPIGCGKLFKGVYHLYKDETYLYQSGKGHTIQEVRIVKGLNNPDLDAAVGEDLAQQLRDELELVKGASNEFDKELFLAGEITPVFFGTALGNFGVDHMLDGLVEWAPAPMPRQTDTRTVEASEDKFTGFVFKIQANMDPKHRDRVAFMRVVSGKYEKGMKLRQVRTAKDVVISDALTFMAGDRSHVEEAYPGDILGLHNHGTIQIGDTFTQGEMMKFTGIPNFAPELFRRIRLKDPLKQKQLLKGLVQLSEEGAVQVFRPISNNDLIVGAVGVLQFDVVVARLKSEYNVEAVYESVNVATARWVECADAKKFEEFKRKNESQLALDGGDNLAYIATSMVNLRLAQERYPDVQFHQTREH |
riboflavin biosynthetic process | cytosol | GTP binding GTP cyclohydrolase II activity magnesium ion binding protein homodimerization activity zinc ion binding | Escherichia coli | 3D-structure Direct protein sequencing GTP-binding Hydrolase Metal-binding Nucleotide-binding Reference proteome Riboflavin biosynthesis Zinc | MQLKRVAEAK | MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEAGINIVERVPLIVGRNPNNEHYLDTKAEKMGHLLNK | riboflavin biosynthetic process cytosol GTP binding GTP cyclohydrolase II activity magnesium ion binding protein homodimerization activity zinc ion binding Escherichia coli 3D-structure Direct protein sequencing GTP-binding Hydrolase Metal-binding Nucleotide-binding Reference proteome Riboflavin biosynthesis Zinc MQLKRVAEAK MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEAGINIVERVPLIVGRNPNNEHYLDTKAEKMGHLLNK |
cytoplasmic translation negative regulation of translation translation | cytoplasm; cytosol; cytosolic large ribosomal subunit; large ribosomal subunit | large ribosomal subunit rRNA binding ribosome binding structural constituent of ribosome | Escherichia coli | 3D-structure Acetylation Direct protein sequencing Reference proteome Repressor Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding Translation regulation | MALNLQDKQA | MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKAGREAGVYMRVVRNTLLRRAVEGTPFECLKDAFVGPTLIAYSMEHPGAAARLFKEFAKANAKFEVKAAAFEGELIPASQIDRLATLPTYEEAIARLMATMKEASAGKLVRTLAAVRDAKEAA | cytoplasmic translation negative regulation of translation translation cytoplasm; cytosol; cytosolic large ribosomal subunit; large ribosomal subunit large ribosomal subunit rRNA binding ribosome binding structural constituent of ribosome Escherichia coli 3D-structure Acetylation Direct protein sequencing Reference proteome Repressor Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding Translation regulation MALNLQDKQA MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKAGREAGVYMRVVRNTLLRRAVEGTPFECLKDAFVGPTLIAYSMEHPGAAARLFKEFAKANAKFEVKAAAFEGELIPASQIDRLATLPTYEEAIARLMATMKEASAGKLVRTLAAVRDAKEAA |
cytoplasmic translation ribosomal large subunit assembly stringent response translation translational termination | cytoplasm; cytosol; cytosolic large ribosomal subunit | large ribosomal subunit rRNA binding rRNA binding structural constituent of ribosome | Escherichia coli | 3D-structure Direct protein sequencing Methylation Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MAKKVQAYVK | MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNKDKVGKISRAQLQEIAQTKAADMTGADIEAMTRSIEGTARSMGLVVED | cytoplasmic translation ribosomal large subunit assembly stringent response translation translational termination cytoplasm; cytosol; cytosolic large ribosomal subunit large ribosomal subunit rRNA binding rRNA binding structural constituent of ribosome Escherichia coli 3D-structure Direct protein sequencing Methylation Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MAKKVQAYVK MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNKDKVGKISRAQLQEIAQTKAADMTGADIEAMTRSIEGTARSMGLVVED |
cytoplasmic translation translation | cytoplasm; cytosol; cytosolic large ribosomal subunit; large ribosomal subunit | mRNA binding protein homodimerization activity ribosome binding structural constituent of ribosome | Escherichia coli | 3D-structure Acetylation Direct protein sequencing Methylation Reference proteome Ribonucleoprotein Ribosomal protein | MSITKDQIIE | MSITKDQIIEAVAAMSVMDVVELISAMEEKFGVSAAAAVAVAAGPVEAAEEKTEFDVILKAAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKALEEAGAEVEVK | cytoplasmic translation translation cytoplasm; cytosol; cytosolic large ribosomal subunit; large ribosomal subunit mRNA binding protein homodimerization activity ribosome binding structural constituent of ribosome Escherichia coli 3D-structure Acetylation Direct protein sequencing Methylation Reference proteome Ribonucleoprotein Ribosomal protein MSITKDQIIE MSITKDQIIEAVAAMSVMDVVELISAMEEKFGVSAAAAVAVAAGPVEAAEEKTEFDVILKAAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKDDAEALKKALEEAGAEVEVK |
cytoplasmic translation ribosomal large subunit assembly | cytoplasm; cytosol; cytosolic large ribosomal subunit | large ribosomal subunit rRNA binding structural constituent of ribosome | Escherichia coli | 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MSNIIKQLEQ | MSNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKERLN | cytoplasmic translation ribosomal large subunit assembly cytoplasm; cytosol; cytosolic large ribosomal subunit large ribosomal subunit rRNA binding structural constituent of ribosome Escherichia coli 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MSNIIKQLEQ MSNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKERLN |
cytoplasmic translation negative regulation of translational initiation ribosomal large subunit assembly | cytoplasm; cytosol; cytosolic large ribosomal subunit | rRNA binding structural constituent of ribosome tRNA binding | Escherichia coli | 3D-structure Direct protein sequencing Reference proteome Repressor Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding Translation regulation tRNA-binding | MAKLTKRMRV | MAKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLADQIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKPTQAKGVYIKKVSISTTMGAGVAVDQAGLSASVN | cytoplasmic translation negative regulation of translational initiation ribosomal large subunit assembly cytoplasm; cytosol; cytosolic large ribosomal subunit rRNA binding structural constituent of ribosome tRNA binding Escherichia coli 3D-structure Direct protein sequencing Reference proteome Repressor Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding Translation regulation tRNA-binding MAKLTKRMRV MAKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLADQIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKPTQAKGVYIKKVSISTTMGAGVAVDQAGLSASVN |
cytoplasmic translation | cytoplasm; cytosol; cytosolic large ribosomal subunit | large ribosomal subunit rRNA binding mRNA binding mRNA regulatory element binding translation repressor activity structural constituent of ribosome | Escherichia coli | 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MARVKRGVIA | MARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQLWIARINAAARQNGISYSKFINGLKKASVEIDRKILADIAVFDKVAFTALVEKAKAALA | cytoplasmic translation cytoplasm; cytosol; cytosolic large ribosomal subunit large ribosomal subunit rRNA binding mRNA binding mRNA regulatory element binding translation repressor activity structural constituent of ribosome Escherichia coli 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MARVKRGVIA MARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQLWIARINAAARQNGISYSKFINGLKKASVEIDRKILADIAVFDKVAFTALVEKAKAALA |
assembly of large subunit precursor of preribosome cytoplasmic translation cytosolic ribosome assembly positive regulation of ribosome biogenesis regulation of cell growth ribosomal large subunit assembly | cytoplasm; cytosolic large ribosomal subunit | ribosome binding rRNA binding structural constituent of ribosome tRNA binding | Escherichia coli | 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding tRNA-binding | MAHKKAGGST | MAHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE | assembly of large subunit precursor of preribosome cytoplasmic translation cytosolic ribosome assembly positive regulation of ribosome biogenesis regulation of cell growth ribosomal large subunit assembly cytoplasm; cytosolic large ribosomal subunit ribosome binding rRNA binding structural constituent of ribosome tRNA binding Escherichia coli 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding tRNA-binding MAHKKAGGST MAHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE |
cytoplasmic translation ribosomal large subunit assembly | cytoplasm; cytosol; cytosolic large ribosomal subunit | rRNA binding structural constituent of ribosome | Escherichia coli | 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MSRVCQVTGK | MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKGIDTVLAELRARGEKY | cytoplasmic translation ribosomal large subunit assembly cytoplasm; cytosol; cytosolic large ribosomal subunit rRNA binding structural constituent of ribosome Escherichia coli 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MSRVCQVTGK MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFVTLRVSAKGMRVIDKKGIDTVLAELRARGEKY |
cytoplasmic translation ribosomal large subunit assembly | cytoplasm; cytosolic large ribosomal subunit | rRNA binding structural constituent of ribosome | Escherichia coli | 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MKAKELREKS | MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLKQVRRDVARVKTLLNEKAGA | cytoplasmic translation ribosomal large subunit assembly cytoplasm; cytosolic large ribosomal subunit rRNA binding structural constituent of ribosome Escherichia coli 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MKAKELREKS MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLKQVRRDVARVKTLLNEKAGA |
cytoplasmic translation negative regulation of cytoplasmic translational initiation translation translational initiation | cytoplasm; cytosol; cytosolic large ribosomal subunit | rRNA binding structural constituent of ribosome zinc ion binding | Escherichia coli | 3D-structure Acetylation Direct protein sequencing Metal-binding Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding Zinc | MKKDIHPKYE | MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFFTGKQRDVATGGRVDRFNKRFNIPGSK | cytoplasmic translation negative regulation of cytoplasmic translational initiation translation translational initiation cytoplasm; cytosol; cytosolic large ribosomal subunit rRNA binding structural constituent of ribosome zinc ion binding Escherichia coli 3D-structure Acetylation Direct protein sequencing Metal-binding Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding Zinc MKKDIHPKYE MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFFTGKQRDVATGGRVDRFNKRFNIPGSK |
cytoplasmic translation response to radiation response to reactive oxygen species ribosomal large subunit assembly | cytoplasm; cytosol; cytosolic large ribosomal subunit | structural constituent of ribosome | Escherichia coli | 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein | MAVQQNKPTR | MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHITADGYYRGRKVIAK | cytoplasmic translation response to radiation response to reactive oxygen species ribosomal large subunit assembly cytoplasm; cytosol; cytosolic large ribosomal subunit structural constituent of ribosome Escherichia coli 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein MAVQQNKPTR MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHITADGYYRGRKVIAK |
cytoplasmic translation response to antibiotic ribosomal large subunit assembly | cytoplasm; cytosol; cytosolic large ribosomal subunit | structural constituent of ribosome tRNA binding | Escherichia coli | 3D-structure Direct protein sequencing Methylation Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding tRNA-binding | MAKGIREKIK | MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK | cytoplasmic translation response to antibiotic ribosomal large subunit assembly cytoplasm; cytosol; cytosolic large ribosomal subunit structural constituent of ribosome tRNA binding Escherichia coli 3D-structure Direct protein sequencing Methylation Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding tRNA-binding MAKGIREKIK MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVRQHVIYKEAKIK |
cytoplasmic translation | cytoplasm; cytosol; cytosolic large ribosomal subunit | large ribosomal subunit rRNA binding structural constituent of ribosome | Escherichia coli | 3D-structure Acetylation Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MQVILLDKVA | MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADAVTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE | cytoplasmic translation cytoplasm; cytosol; cytosolic large ribosomal subunit large ribosomal subunit rRNA binding structural constituent of ribosome Escherichia coli 3D-structure Acetylation Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MQVILLDKVA MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADAVTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE |
cytoplasmic translation regulation of DNA-templated transcription elongation ribosome biogenesis transcription antitermination | cytoplasm; cytosol; cytosolic small ribosomal subunit; small ribosomal subunit; transcription elongation factor complex | structural constituent of ribosome transcription antitermination factor activity, RNA binding tRNA binding | Escherichia coli | 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein Ribosome biogenesis RNA-binding Transcription Transcription antitermination Transcription regulation | MQNQRIRIRL | MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISLG | cytoplasmic translation regulation of DNA-templated transcription elongation ribosome biogenesis transcription antitermination cytoplasm; cytosol; cytosolic small ribosomal subunit; small ribosomal subunit; transcription elongation factor complex structural constituent of ribosome transcription antitermination factor activity, RNA binding tRNA binding Escherichia coli 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein Ribosome biogenesis RNA-binding Transcription Transcription antitermination Transcription regulation MQNQRIRIRL MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISLG |
cytoplasmic translation translation | cytoplasm; cytosol; cytosolic small ribosomal subunit | small ribosomal subunit rRNA binding structural constituent of ribosome | Escherichia coli | 3D-structure Direct protein sequencing Methylation Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MAKAPIRARK | MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV | cytoplasmic translation translation cytoplasm; cytosol; cytosolic small ribosomal subunit small ribosomal subunit rRNA binding structural constituent of ribosome Escherichia coli 3D-structure Direct protein sequencing Methylation Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MAKAPIRARK MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV |
cytoplasmic translation Group I intron splicing maintenance of translational fidelity positive regulation of RNA splicing response to antibiotic RNA folding translation | cytoplasm; cytosol; cytosolic small ribosomal subunit; ribosome | misfolded RNA binding rRNA binding structural constituent of ribosome tRNA binding | Escherichia coli | 3D-structure Acetylation Antibiotic resistance Direct protein sequencing Methylation Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding tRNA-binding | MATVNQLVRK | MATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGVKDRKQARSKYGVKRPKA | cytoplasmic translation Group I intron splicing maintenance of translational fidelity positive regulation of RNA splicing response to antibiotic RNA folding translation cytoplasm; cytosol; cytosolic small ribosomal subunit; ribosome misfolded RNA binding rRNA binding structural constituent of ribosome tRNA binding Escherichia coli 3D-structure Acetylation Antibiotic resistance Direct protein sequencing Methylation Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding tRNA-binding MATVNQLVRK MATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGVKDRKQARSKYGVKRPKA |
cytoplasmic translation | cytoplasm; cytosol; cytosolic small ribosomal subunit; small ribosomal subunit | rRNA binding structural constituent of ribosome tRNA binding | Escherichia coli | 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding tRNA-binding | MARIAGINIP | MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK | cytoplasmic translation cytoplasm; cytosol; cytosolic small ribosomal subunit; small ribosomal subunit rRNA binding structural constituent of ribosome tRNA binding Escherichia coli 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding tRNA-binding MARIAGINIP MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVKISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK |
cytoplasmic translation ribosomal small subunit assembly | cytoplasm; cytosolic small ribosomal subunit; small ribosomal subunit | DNA endonuclease activity four-way junction DNA binding structural constituent of ribosome | Escherichia coli | 3D-structure Direct protein sequencing Endonuclease Hydrolase Nuclease Reference proteome Ribonucleoprotein Ribosomal protein | MVTIRLARHG | MVTIRLARHGAKKRPFYQVVVADSRNARNGRFIERVGFFNPIASEKEEGTRLDLDRIAHWVGQGATISDRVAALIKEVNKAA | cytoplasmic translation ribosomal small subunit assembly cytoplasm; cytosolic small ribosomal subunit; small ribosomal subunit DNA endonuclease activity four-way junction DNA binding structural constituent of ribosome Escherichia coli 3D-structure Direct protein sequencing Endonuclease Hydrolase Nuclease Reference proteome Ribonucleoprotein Ribosomal protein MVTIRLARHG MVTIRLARHGAKKRPFYQVVVADSRNARNGRFIERVGFFNPIASEKEEGTRLDLDRIAHWVGQGATISDRVAALIKEVNKAA |
cytoplasmic translation translation | cytoplasm; cytosol; cytosolic small ribosomal subunit | mRNA 5'-UTR binding small ribosomal subunit rRNA binding structural constituent of ribosome | Escherichia coli | 3D-structure Acetylation Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MARYFRRRKF | MARYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLSLLPYTDRHQ | cytoplasmic translation translation cytoplasm; cytosol; cytosolic small ribosomal subunit mRNA 5'-UTR binding small ribosomal subunit rRNA binding structural constituent of ribosome Escherichia coli 3D-structure Acetylation Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MARYFRRRKF MARYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRITGTRAKYQRQLARAIKRARYLSLLPYTDRHQ |
cytoplasmic translation ribosomal small subunit assembly | cytoplasm; cytosol; cytosolic small ribosomal subunit | rRNA binding structural constituent of ribosome tRNA binding | Escherichia coli | 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding tRNA-binding | MPRSLKKGPF | MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNMIGLTIAVHNGRQHVPVFVTDEMVGHKLGEFAPTRTYRGHAADKKAKKK | cytoplasmic translation ribosomal small subunit assembly cytoplasm; cytosol; cytosolic small ribosomal subunit rRNA binding structural constituent of ribosome tRNA binding Escherichia coli 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding tRNA-binding MPRSLKKGPF MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNMIGLTIAVHNGRQHVPVFVTDEMVGHKLGEFAPTRTYRGHAADKKAKKK |
cytoplasmic translation ribosomal small subunit assembly | cytoplasm; cytosol; cytosolic small ribosomal subunit; small ribosomal subunit | ornithine decarboxylase inhibitor activity small ribosomal subunit rRNA binding structural constituent of ribosome | Escherichia coli | 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MANIKSAKKR | MANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA | cytoplasmic translation ribosomal small subunit assembly cytoplasm; cytosol; cytosolic small ribosomal subunit; small ribosomal subunit ornithine decarboxylase inhibitor activity small ribosomal subunit rRNA binding structural constituent of ribosome Escherichia coli 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MANIKSAKKR MANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA |
cytoplasmic translation ribosomal small subunit assembly | cytoplasm; cytosolic small ribosomal subunit | structural constituent of ribosome zinc ion binding | Escherichia coli | 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein | MATVSMRDML | MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFVEAE | cytoplasmic translation ribosomal small subunit assembly cytoplasm; cytosolic small ribosomal subunit structural constituent of ribosome zinc ion binding Escherichia coli 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein MATVSMRDML MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFVEAE |
cytoplasmic translation ribosomal small subunit assembly | cytoplasm; cytosol; cytosolic small ribosomal subunit | mRNA binding rRNA binding structural constituent of ribosome | Escherichia coli | 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MGQKVHPNGI | MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK | cytoplasmic translation ribosomal small subunit assembly cytoplasm; cytosol; cytosolic small ribosomal subunit mRNA binding rRNA binding structural constituent of ribosome Escherichia coli 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MGQKVHPNGI MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK |
cytoplasmic translation DNA-templated transcription termination maintenance of translational fidelity negative regulation of translational initiation response to antibiotic ribosomal small subunit assembly ribosomal small subunit biogenesis transcription antitermination | cytoplasm; cytosol; cytosolic small ribosomal subunit; small ribosomal subunit | mRNA 5'-UTR binding mRNA regulatory element binding translation repressor activity rRNA binding structural constituent of ribosome | Escherichia coli | 3D-structure Antibiotic resistance Direct protein sequencing Reference proteome Repressor Ribonucleoprotein Ribosomal protein Ribosome biogenesis RNA-binding rRNA-binding Transcription Transcription antitermination Transcription regulation Transcription termination Translation regulation | MARYLGPKLK | MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGARKPRLSDYGVQLREKQKVRRIYGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKMEGTFKRKPERSDLSADINEHLIVELYSK | cytoplasmic translation DNA-templated transcription termination maintenance of translational fidelity negative regulation of translational initiation response to antibiotic ribosomal small subunit assembly ribosomal small subunit biogenesis transcription antitermination cytoplasm; cytosol; cytosolic small ribosomal subunit; small ribosomal subunit mRNA 5'-UTR binding mRNA regulatory element binding translation repressor activity rRNA binding structural constituent of ribosome Escherichia coli 3D-structure Antibiotic resistance Direct protein sequencing Reference proteome Repressor Ribonucleoprotein Ribosomal protein Ribosome biogenesis RNA-binding rRNA-binding Transcription Transcription antitermination Transcription regulation Transcription termination Translation regulation MARYLGPKLK MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGARKPRLSDYGVQLREKQKVRRIYGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKMEGTFKRKPERSDLSADINEHLIVELYSK |
cytoplasmic translation maintenance of translational fidelity response to antibiotic ribosomal small subunit assembly translation | cytoplasm; cytosol; cytosolic small ribosomal subunit | rRNA binding structural constituent of ribosome | Escherichia coli | 3D-structure Acetylation Antibiotic resistance Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MAHIEKQAGE | MAHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKARRNMINVALNNGTLQHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKSVEEILGK | cytoplasmic translation maintenance of translational fidelity response to antibiotic ribosomal small subunit assembly translation cytoplasm; cytosol; cytosolic small ribosomal subunit rRNA binding structural constituent of ribosome Escherichia coli 3D-structure Acetylation Antibiotic resistance Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MAHIEKQAGE MAHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKARRNMINVALNNGTLQHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKSVEEILGK |
cytoplasmic translation regulation of mRNA stability regulation of translation ribosomal small subunit assembly | cytoplasm; cytosol; cytosolic small ribosomal subunit | rRNA binding structural constituent of ribosome | Escherichia coli | 3D-structure Direct protein sequencing Reference proteome Repressor Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding Translation regulation | MSMQDPIADM | MSMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAGLGGEIICYVA | cytoplasmic translation regulation of mRNA stability regulation of translation ribosomal small subunit assembly cytoplasm; cytosol; cytosolic small ribosomal subunit rRNA binding structural constituent of ribosome Escherichia coli 3D-structure Direct protein sequencing Reference proteome Repressor Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding Translation regulation MSMQDPIADM MSMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAGLGGEIICYVA |
cytoplasmic translation | cytoplasm; cytosol; cytosolic small ribosomal subunit | RNA binding structural constituent of ribosome tRNA binding | Escherichia coli | 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding tRNA-binding | MAENQYYGTG | MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRKARRRPQFSKR | cytoplasmic translation cytoplasm; cytosol; cytosolic small ribosomal subunit RNA binding structural constituent of ribosome tRNA binding Escherichia coli 3D-structure Direct protein sequencing Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding tRNA-binding MAENQYYGTG MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRKARRRPQFSKR |
maturation of SSU-rRNA ribosomal small subunit assembly | cytosol; ribosome | ribosome binding rRNA binding | Escherichia coli | Chaperone Cytoplasm Reference proteome Ribosome biogenesis RNA-binding rRNA processing rRNA-binding | MSKQLTAQAP | MSKQLTAQAPVDPIVLGKMGSSYGIRGWLRVFSSTEDAESIFDYQPWFIQKAGQWQQVQLESWKHHNQDMIIKLKGVDDRDAANLLTNCEIVVDSSQLPQLEEGDYYWKDLMGCQVVTTEGYDLGKVVDMMETGSNDVLVIKANLKDAFGIKERLVPFLDGQVIKKVDLTTRSIEVDWDPGF | maturation of SSU-rRNA ribosomal small subunit assembly cytosol; ribosome ribosome binding rRNA binding Escherichia coli Chaperone Cytoplasm Reference proteome Ribosome biogenesis RNA-binding rRNA processing rRNA-binding MSKQLTAQAP MSKQLTAQAPVDPIVLGKMGSSYGIRGWLRVFSSTEDAESIFDYQPWFIQKAGQWQQVQLESWKHHNQDMIIKLKGVDDRDAANLLTNCEIVVDSSQLPQLEEGDYYWKDLMGCQVVTTEGYDLGKVVDMMETGSNDVLVIKANLKDAFGIKERLVPFLDGQVIKKVDLTTRSIEVDWDPGF |
mRNA processing regulation of gene expression RNA processing rRNA processing tRNA processing | cytosol | ATP binding double-stranded RNA binding enzyme binding magnesium ion binding protein homodimerization activity ribonuclease III activity rRNA binding | Escherichia coli | 3D-structure ATP-binding Cytoplasm Direct protein sequencing Endonuclease Hydrolase Magnesium Metal-binding mRNA processing Nuclease Nucleotide-binding Reference proteome RNA-binding rRNA processing rRNA-binding tRNA processing | MNPIVINRLQ | MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE | mRNA processing regulation of gene expression RNA processing rRNA processing tRNA processing cytosol ATP binding double-stranded RNA binding enzyme binding magnesium ion binding protein homodimerization activity ribonuclease III activity rRNA binding Escherichia coli 3D-structure ATP-binding Cytoplasm Direct protein sequencing Endonuclease Hydrolase Magnesium Metal-binding mRNA processing Nuclease Nucleotide-binding Reference proteome RNA-binding rRNA processing rRNA-binding tRNA processing MNPIVINRLQ MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE |
DNA replication, removal of RNA primer | cytoplasm | endonuclease activity magnesium ion binding nucleic acid binding RNA-DNA hybrid ribonuclease activity | Escherichia coli | 3D-structure Cytoplasm Direct protein sequencing Endonuclease Hydrolase Magnesium Metal-binding Nuclease Reference proteome | MLKQVEIFTD | MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV | DNA replication, removal of RNA primer cytoplasm endonuclease activity magnesium ion binding nucleic acid binding RNA-DNA hybrid ribonuclease activity Escherichia coli 3D-structure Cytoplasm Direct protein sequencing Endonuclease Hydrolase Magnesium Metal-binding Nuclease Reference proteome MLKQVEIFTD MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV |
D-ribose metabolic process pentose-phosphate shunt, non-oxidative branch | cytosol | identical protein binding protein homodimerization activity ribose-5-phosphate isomerase activity | Escherichia coli | 3D-structure Direct protein sequencing Isomerase Reference proteome | MTQDELKKAV | MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMKGQIEGAVSSSDASTEKLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYRQGVVTDNGNVILDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK | D-ribose metabolic process pentose-phosphate shunt, non-oxidative branch cytosol identical protein binding protein homodimerization activity ribose-5-phosphate isomerase activity Escherichia coli 3D-structure Direct protein sequencing Isomerase Reference proteome MTQDELKKAV MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMKGQIEGAVSSSDASTEKLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYRQGVVTDNGNVILDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIVK |
bacterial-type flagellum assembly bacterial-type flagellum-dependent cell motility cell motility cellular response to cell envelope stress DNA-templated transcription initiation intracellular iron ion homeostasis nitrate assimilation regulation of DNA-templated transcription elongation regulation of DNA-templated transcription initiation response to heat submerged biofilm formation transcription antitermination | cytoplasm; cytosol; cytosolic DNA-directed RNA polymerase complex; membrane; transcription elongation factor complex | DNA binding DNA-directed 5'-3' RNA polymerase activity protein dimerization activity | Escherichia coli | 3D-structure Acetylation ADP-ribosylation Direct protein sequencing DNA-directed RNA polymerase Nucleotidyltransferase Reference proteome Transcription Transferase | MQGSVTEFLK | MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIHSEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQPEVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIADE | bacterial-type flagellum assembly bacterial-type flagellum-dependent cell motility cell motility cellular response to cell envelope stress DNA-templated transcription initiation intracellular iron ion homeostasis nitrate assimilation regulation of DNA-templated transcription elongation regulation of DNA-templated transcription initiation response to heat submerged biofilm formation transcription antitermination cytoplasm; cytosol; cytosolic DNA-directed RNA polymerase complex; membrane; transcription elongation factor complex DNA binding DNA-directed 5'-3' RNA polymerase activity protein dimerization activity Escherichia coli 3D-structure Acetylation ADP-ribosylation Direct protein sequencing DNA-directed RNA polymerase Nucleotidyltransferase Reference proteome Transcription Transferase MQGSVTEFLK MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIHSEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQPEVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIADE |
bacterial-type flagellum assembly bacterial-type flagellum-dependent cell motility cell motility cellular response to cell envelope stress DNA-templated transcription initiation intracellular iron ion homeostasis nitrate assimilation protein-containing complex assembly regulation of DNA-templated transcription elongation regulation of DNA-templated transcription initiation response to heat submerged biofilm formation transcription antitermination | cytosol; cytosolic DNA-directed RNA polymerase complex; RNA polymerase complex; transcription elongation factor complex | DNA binding DNA-directed 5'-3' RNA polymerase activity | Escherichia coli | 3D-structure Direct protein sequencing DNA-directed RNA polymerase Nucleotidyltransferase Reference proteome Transcription Transferase | MARVTVQDAV | MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLINNQILDVRERQEQQEQEAAELQAVTAIAEGRR | bacterial-type flagellum assembly bacterial-type flagellum-dependent cell motility cell motility cellular response to cell envelope stress DNA-templated transcription initiation intracellular iron ion homeostasis nitrate assimilation protein-containing complex assembly regulation of DNA-templated transcription elongation regulation of DNA-templated transcription initiation response to heat submerged biofilm formation transcription antitermination cytosol; cytosolic DNA-directed RNA polymerase complex; RNA polymerase complex; transcription elongation factor complex DNA binding DNA-directed 5'-3' RNA polymerase activity Escherichia coli 3D-structure Direct protein sequencing DNA-directed RNA polymerase Nucleotidyltransferase Reference proteome Transcription Transferase MARVTVQDAV MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLINNQILDVRERQEQQEQEAAELQAVTAIAEGRR |
recombinational repair response to radiation SOS response | cytoplasm; Holliday junction helicase complex; Holliday junction resolvase complex | ATP binding four-way junction DNA binding four-way junction helicase activity identical protein binding | Escherichia coli | 3D-structure Cytoplasm Direct protein sequencing DNA damage DNA recombination DNA repair DNA-binding Reference proteome SOS response | MIGRLRGIII | MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAAL | recombinational repair response to radiation SOS response cytoplasm; Holliday junction helicase complex; Holliday junction resolvase complex ATP binding four-way junction DNA binding four-way junction helicase activity identical protein binding Escherichia coli 3D-structure Cytoplasm Direct protein sequencing DNA damage DNA recombination DNA repair DNA-binding Reference proteome SOS response MIGRLRGIII MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAAL |
recombinational repair response to UV SOS response | cytosol; Holliday junction helicase complex; Holliday junction resolvase complex | ATP binding ATP hydrolysis activity DNA helicase activity four-way junction DNA binding four-way junction helicase activity | Escherichia coli | ATP-binding Cytoplasm Direct protein sequencing DNA damage DNA recombination DNA repair DNA-binding Hydrolase Nucleotide-binding Reference proteome SOS response | MIEADRLISA | MIEADRLISAGTTLPEDVADRAIRPKLLEEYVGQPQVRSQMEIFIKAAKLRGDALDHLLIFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEFYQVPDLQYIVSRSARFMGLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKHDGTISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDVLEPYLIQQGFLQRTPRGRMATTRAWNHFGITPPEMP | recombinational repair response to UV SOS response cytosol; Holliday junction helicase complex; Holliday junction resolvase complex ATP binding ATP hydrolysis activity DNA helicase activity four-way junction DNA binding four-way junction helicase activity Escherichia coli ATP-binding Cytoplasm Direct protein sequencing DNA damage DNA recombination DNA repair DNA-binding Hydrolase Nucleotide-binding Reference proteome SOS response MIEADRLISA MIEADRLISAGTTLPEDVADRAIRPKLLEEYVGQPQVRSQMEIFIKAAKLRGDALDHLLIFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEFYQVPDLQYIVSRSARFMGLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKHDGTISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDVLEPYLIQQGFLQRTPRGRMATTRAWNHFGITPPEMP |
recombinational repair response to radiation | cytoplasm; Holliday junction resolvase complex | crossover junction DNA endonuclease activity DNA binding magnesium ion binding | Escherichia coli | 3D-structure Cytoplasm Direct protein sequencing DNA damage DNA recombination DNA repair DNA-binding Endonuclease Hydrolase Magnesium Metal-binding Nuclease Reference proteome | MAIILGIDPG | MAIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAARQVKQTVVGIGSAEKSQVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQMSESRLNLARGRLR | recombinational repair response to radiation cytoplasm; Holliday junction resolvase complex crossover junction DNA endonuclease activity DNA binding magnesium ion binding Escherichia coli 3D-structure Cytoplasm Direct protein sequencing DNA damage DNA recombination DNA repair DNA-binding Endonuclease Hydrolase Magnesium Metal-binding Nuclease Reference proteome MAIILGIDPG MAIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAARQVKQTVVGIGSAEKSQVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQMSESRLNLARGRLR |
one-carbon metabolic process S-adenosylmethionine biosynthetic process S-adenosylmethionine cycle | cytosol | ATP binding identical protein binding magnesium ion binding methionine adenosyltransferase activity potassium ion binding | Escherichia coli | 3D-structure Acetylation ATP-binding Cobalt Cytoplasm Host-virus interaction Magnesium Manganese Metal-binding Nucleotide-binding One-carbon metabolism Potassium Reference proteome Transferase | MAKHLFTSES | MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVDRADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQYDDGKIVGIDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLLHPIYKETAAYGHFGREHFPWEKTDKAQLLRDAAGLK | one-carbon metabolic process S-adenosylmethionine biosynthetic process S-adenosylmethionine cycle cytosol ATP binding identical protein binding magnesium ion binding methionine adenosyltransferase activity potassium ion binding Escherichia coli 3D-structure Acetylation ATP-binding Cobalt Cytoplasm Host-virus interaction Magnesium Manganese Metal-binding Nucleotide-binding One-carbon metabolism Potassium Reference proteome Transferase MAKHLFTSES MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVDRADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQYDDGKIVGIDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLLHPIYKETAAYGHFGREHFPWEKTDKAQLLRDAAGLK |
selenocysteine biosynthetic process selenocysteine incorporation | cytosol | identical protein binding L-seryl-tRNA(Sec) selenium transferase activity pyridoxal phosphate binding | Escherichia coli | Cytoplasm Protein biosynthesis Pyridoxal phosphate Reference proteome Selenium Transferase | MTTETRSLYS | MTTETRSLYSQLPAIDRLLRDSSFLSLRDTYGHTRVVELLRQMLDEAREVIRGSQTLPAWCENWAQEVDARLTKEAQSALRPVINLTGTVLHTNLGRALQAEAAVEAVAQAMRSPVTLEYDLDDAGRGHRDRALAQLLCRITGAEDACIVNNNAAAVLLMLAATASGKEVVVSRGELVEIGGAFRIPDVMRQAGCTLHEVGTTNRTHANDYRQAVNENTALLMKVHTSNYSIQGFTKAIDEAELVALGKELDVPVVTDLGSGSLVDLSQYGLPKEPMPQELIAAGVSLVSFSGDKLLGGPQAGIIVGKKEMIARLQSHPLKRALRADKMTLAALEATLRLYLHPEALSEKLPTLRLLTRSAEVIQIQAQRLQAPLAAHYGAEFAVQVMPCLSQIGSGSLPVDRLPSAALTFTPHDGRGSHLESLAARWRELPVPVIGRIYDGRLWLDLRCLEDEQRFLEMLLK | selenocysteine biosynthetic process selenocysteine incorporation cytosol identical protein binding L-seryl-tRNA(Sec) selenium transferase activity pyridoxal phosphate binding Escherichia coli Cytoplasm Protein biosynthesis Pyridoxal phosphate Reference proteome Selenium Transferase MTTETRSLYS MTTETRSLYSQLPAIDRLLRDSSFLSLRDTYGHTRVVELLRQMLDEAREVIRGSQTLPAWCENWAQEVDARLTKEAQSALRPVINLTGTVLHTNLGRALQAEAAVEAVAQAMRSPVTLEYDLDDAGRGHRDRALAQLLCRITGAEDACIVNNNAAAVLLMLAATASGKEVVVSRGELVEIGGAFRIPDVMRQAGCTLHEVGTTNRTHANDYRQAVNENTALLMKVHTSNYSIQGFTKAIDEAELVALGKELDVPVVTDLGSGSLVDLSQYGLPKEPMPQELIAAGVSLVSFSGDKLLGGPQAGIIVGKKEMIARLQSHPLKRALRADKMTLAALEATLRLYLHPEALSEKLPTLRLLTRSAEVIQIQAQRLQAPLAAHYGAEFAVQVMPCLSQIGSGSLPVDRLPSAALTFTPHDGRGSHLESLAARWRELPVPVIGRIYDGRLWLDLRCLEDEQRFLEMLLK |
folic acid metabolic process glycine biosynthetic process from serine glycine catabolic process L-serine biosynthetic process L-serine catabolic process one-carbon metabolic process tetrahydrofolate interconversion tetrahydrofolate metabolic process | cytoplasm; cytosol; membrane | glycine hydroxymethyltransferase activity identical protein binding L-allo-threonine aldolase activity protein homodimerization activity pyridoxal phosphate binding serine binding zinc ion binding | Escherichia coli | 3D-structure Acetylation Amino-acid biosynthesis Cytoplasm Direct protein sequencing One-carbon metabolism Pyridoxal phosphate Reference proteome Transferase | MLKREMNIAD | MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDSINDEAVIERIKGKVLDICARYPVYA | folic acid metabolic process glycine biosynthetic process from serine glycine catabolic process L-serine biosynthetic process L-serine catabolic process one-carbon metabolic process tetrahydrofolate interconversion tetrahydrofolate metabolic process cytoplasm; cytosol; membrane glycine hydroxymethyltransferase activity identical protein binding L-allo-threonine aldolase activity protein homodimerization activity pyridoxal phosphate binding serine binding zinc ion binding Escherichia coli 3D-structure Acetylation Amino-acid biosynthesis Cytoplasm Direct protein sequencing One-carbon metabolism Pyridoxal phosphate Reference proteome Transferase MLKREMNIAD MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDSINDEAVIERIKGKVLDICARYPVYA |
DNA damage response fumarate transport L-aspartate transmembrane transport | membrane; plasma membrane | fumarate transmembrane transporter activity L-aspartate transmembrane transporter activity malate:proton symporter activity succinate transmembrane transporter activity | Escherichia coli | Cell inner membrane Cell membrane Membrane Reference proteome Symport Transmembrane Transmembrane helix Transport | MKTSLFKSLY | MKTSLFKSLYFQVLTAIAIGILLGHFYPEIGEQMKPLGDGFVKLIKMIIAPVIFCTVVTGIAGMESMKAVGRTGAVALLYFEIVSTIALIIGLIIVNVVQPGAGMNVDPATLDAKAVAVYADQAKDQGIVAFIMDVIPASVIGAFASGNILQVLLFAVLFGFALHRLGSKGQLIFNVIESFSQVIFGIINMIMRLAPIGAFGAMAFTIGKYGVGTLVQLGQLIICFYITCILFVVLVLGSIAKATGFSIFKFIRYIREELLIVLGTSSSESALPRMLDKMEKLGCRKSVVGLVIPTGYSFNLDGTSIYLTMAAVFIAQATNSQMDIVHQITLLIVLLLSSKGAAGVTGSGFIVLAATLSAVGHLPVAGLALILGIDRFMSEARALTNLVGNGVATIVVAKWVKELDHKKLDDVLNNRAPDGKTHELSS | DNA damage response fumarate transport L-aspartate transmembrane transport membrane; plasma membrane fumarate transmembrane transporter activity L-aspartate transmembrane transporter activity malate:proton symporter activity succinate transmembrane transporter activity Escherichia coli Cell inner membrane Cell membrane Membrane Reference proteome Symport Transmembrane Transmembrane helix Transport MKTSLFKSLY MKTSLFKSLYFQVLTAIAIGILLGHFYPEIGEQMKPLGDGFVKLIKMIIAPVIFCTVVTGIAGMESMKAVGRTGAVALLYFEIVSTIALIIGLIIVNVVQPGAGMNVDPATLDAKAVAVYADQAKDQGIVAFIMDVIPASVIGAFASGNILQVLLFAVLFGFALHRLGSKGQLIFNVIESFSQVIFGIINMIMRLAPIGAFGAMAFTIGKYGVGTLVQLGQLIICFYITCILFVVLVLGSIAKATGFSIFKFIRYIREELLIVLGTSSSESALPRMLDKMEKLGCRKSVVGLVIPTGYSFNLDGTSIYLTMAAVFIAQATNSQMDIVHQITLLIVLLLSSKGAAGVTGSGFIVLAATLSAVGHLPVAGLALILGIDRFMSEARALTNLVGNGVATIVVAKWVKELDHKKLDDVLNNRAPDGKTHELSS |
trans-translation | cytosol | RNA binding | Escherichia coli | 3D-structure Cytoplasm Direct protein sequencing Reference proteome RNA-binding | MTKKKAHKPG | MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR | trans-translation cytosol RNA binding Escherichia coli 3D-structure Cytoplasm Direct protein sequencing Reference proteome RNA-binding MTKKKAHKPG MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR |
succinyl-CoA metabolic process tricarboxylic acid cycle | cytoplasm; cytosol; succinate-CoA ligase complex; succinate-CoA ligase complex (ADP-forming) | ATP binding magnesium ion binding succinate-CoA ligase (ADP-forming) activity succinate-CoA ligase (GDP-forming) activity | Escherichia coli | 3D-structure ATP-binding Direct protein sequencing Ligase Magnesium Metal-binding Nucleotide-binding Reference proteome Tricarboxylic acid cycle | MNLHEYQAKQ | MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEGK | succinyl-CoA metabolic process tricarboxylic acid cycle cytoplasm; cytosol; succinate-CoA ligase complex; succinate-CoA ligase complex (ADP-forming) ATP binding magnesium ion binding succinate-CoA ligase (ADP-forming) activity succinate-CoA ligase (GDP-forming) activity Escherichia coli 3D-structure ATP-binding Direct protein sequencing Ligase Magnesium Metal-binding Nucleotide-binding Reference proteome Tricarboxylic acid cycle MNLHEYQAKQ MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWVVKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQPDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEGK |
UMP catabolic process | cytoplasm | 3'-nucleotidase activity 5'-nucleotidase activity exopolyphosphatase activity GMP 5'-nucleotidase activity manganese ion binding nucleotide binding XMP 5'-nucleosidase activity | Escherichia coli | Cobalt Cytoplasm Hydrolase Magnesium Manganese Metal-binding Nickel Nucleotide-binding Reference proteome Zinc | MRILLSNDDG | MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW | UMP catabolic process cytoplasm 3'-nucleotidase activity 5'-nucleotidase activity exopolyphosphatase activity GMP 5'-nucleotidase activity manganese ion binding nucleotide binding XMP 5'-nucleosidase activity Escherichia coli Cobalt Cytoplasm Hydrolase Magnesium Manganese Metal-binding Nickel Nucleotide-binding Reference proteome Zinc MRILLSNDDG MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW |
queuosine biosynthetic process tRNA wobble guanine modification tRNA-guanine transglycosylation | cytoplasm; cytosol | tRNA-guanosine(34) queuine transglycosylase activity zinc ion binding | Escherichia coli | Direct protein sequencing Glycosyltransferase Metal-binding Queuosine biosynthesis Reference proteome Transferase tRNA processing Zinc | MKFELDTTDG | MKFELDTTDGRARRGRLVFDRGVVETPCFMPVGTYGTVKGMTPEEVEATGAQIILGNTFHLWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIRKITEQGVHFRNPINGDPIFLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSMEMSLRWAKRSRERFDSLGNKNALFGIIQGSVYEDLRDISVKGLVDIGFDGYAVGGLAVGEPKADMHRILEHVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTDGVVKIRNAKYKSDTGPLDPECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHNLRYYQRLMAGLRKAIEEGKLESFVTDFYQRQGREVPPLNVD | queuosine biosynthetic process tRNA wobble guanine modification tRNA-guanine transglycosylation cytoplasm; cytosol tRNA-guanosine(34) queuine transglycosylase activity zinc ion binding Escherichia coli Direct protein sequencing Glycosyltransferase Metal-binding Queuosine biosynthesis Reference proteome Transferase tRNA processing Zinc MKFELDTTDG MKFELDTTDGRARRGRLVFDRGVVETPCFMPVGTYGTVKGMTPEEVEATGAQIILGNTFHLWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIRKITEQGVHFRNPINGDPIFLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSMEMSLRWAKRSRERFDSLGNKNALFGIIQGSVYEDLRDISVKGLVDIGFDGYAVGGLAVGEPKADMHRILEHVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTDGVVKIRNAKYKSDTGPLDPECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHNLRYYQRLMAGLRKAIEEGKLESFVTDFYQRQGREVPPLNVD |
de novo' cotranslational protein folding cell cycle cell division chaperone-mediated protein folding protein transport protein unfolding response to heat stress response to copper ion | cytosol; membrane | identical protein binding peptidyl-prolyl cis-trans isomerase activity protein folding chaperone ribosome binding | Escherichia coli | 3D-structure ADP-ribosylation Cell cycle Cell division Chaperone Cytoplasm Direct protein sequencing Isomerase Reference proteome Rotamase | MQVSVETTQG | MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGASVRQDVLGDLMSRNFIDAIIKEKINPAGAPTYVPGEYKLGEDFTYSVEFEVYPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGSVDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAKFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAIEGLVKANDIDVPAALIDSEIDVLRRQAAQRFGGNEKQALELPRELFEEQAKRRVVVGLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNKELMDNMRNVALEEQAVEAVLAKAKVTEKETTFNELMNQQA | de novo' cotranslational protein folding cell cycle cell division chaperone-mediated protein folding protein transport protein unfolding response to heat stress response to copper ion cytosol; membrane identical protein binding peptidyl-prolyl cis-trans isomerase activity protein folding chaperone ribosome binding Escherichia coli 3D-structure ADP-ribosylation Cell cycle Cell division Chaperone Cytoplasm Direct protein sequencing Isomerase Reference proteome Rotamase MQVSVETTQG MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGASVRQDVLGDLMSRNFIDAIIKEKINPAGAPTYVPGEYKLGEDFTYSVEFEVYPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGSVDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAKFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAIEGLVKANDIDVPAALIDSEIDVLRRQAAQRFGGNEKQALELPRELFEEQAKRRVVVGLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNKELMDNMRNVALEEQAVEAVLAKAKVTEKETTFNELMNQQA |
indole metabolic process tryptophan catabolic process | cell pole; cytosol; membrane; protein-containing complex | identical protein binding L-cysteine desulfhydrase activity potassium ion binding pyridoxal phosphate binding tryptophanase activity | Escherichia coli | 3D-structure Acetylation Cytoplasm Direct protein sequencing Lyase Pyridoxal phosphate Reference proteome Tryptophan catabolism | MENFKHLPEP | MENFKHLPEPFRIRVIEPVKRTTRAYREEAIIKSGMNPFLLDSEDVFIDLLTDSGTGAVTQSMQAAMMRGDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEIGVVCQQAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAANIKGLTFTYEPKVLRHFTAKLKEV | indole metabolic process tryptophan catabolic process cell pole; cytosol; membrane; protein-containing complex identical protein binding L-cysteine desulfhydrase activity potassium ion binding pyridoxal phosphate binding tryptophanase activity Escherichia coli 3D-structure Acetylation Cytoplasm Direct protein sequencing Lyase Pyridoxal phosphate Reference proteome Tryptophan catabolism MENFKHLPEP MENFKHLPEPFRIRVIEPVKRTTRAYREEAIIKSGMNPFLLDSEDVFIDLLTDSGTGAVTQSMQAAMMRGDEAYSGSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEIGVVCQQAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAANIKGLTFTYEPKVLRHFTAKLKEV |
bacteriocin transport cell cycle cell division cellular response to bacteriocin protein import protein transport regulation of membrane invagination | cell division site; membrane; outer membrane-bounded periplasmic space; periplasmic space; protein-containing complex | protein domain specific binding protein-containing complex binding | Escherichia coli | 3D-structure Cell cycle Cell division Direct protein sequencing Periplasm Reference proteome Signal | MKQALRVAFG | MKQALRVAFGFLILWASVLHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVAADLRNSGKFNPLDRARLPQQPGSAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL | bacteriocin transport cell cycle cell division cellular response to bacteriocin protein import protein transport regulation of membrane invagination cell division site; membrane; outer membrane-bounded periplasmic space; periplasmic space; protein-containing complex protein domain specific binding protein-containing complex binding Escherichia coli 3D-structure Cell cycle Cell division Direct protein sequencing Periplasm Reference proteome Signal MKQALRVAFG MKQALRVAFGFLILWASVLHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVAADLRNSGKFNPLDRARLPQQPGSAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL |
gluconeogenesis glyceraldehyde-3-phosphate biosynthetic process glycerol catabolic process glycolytic process | cytosol; membrane | identical protein binding triose-phosphate isomerase activity | Escherichia coli | 3D-structure Cytoplasm Direct protein sequencing Gluconeogenesis Glycolysis Isomerase Reference proteome | MRHPLVMGNW | MRHPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAEAAKQA | gluconeogenesis glyceraldehyde-3-phosphate biosynthetic process glycerol catabolic process glycolytic process cytosol; membrane identical protein binding triose-phosphate isomerase activity Escherichia coli 3D-structure Cytoplasm Direct protein sequencing Gluconeogenesis Glycolysis Isomerase Reference proteome MRHPLVMGNW MRHPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAEAAKQA |
cellular response to oxidative stress | cytoplasm; cytosol; periplasmic space | hydroperoxide reductase activity thioredoxin peroxidase activity | Escherichia coli | 3D-structure Antioxidant Cytoplasm Direct protein sequencing Disulfide bond Oxidoreductase Periplasm Peroxidase Redox-active center Reference proteome | MSQTVHFQGN | MSQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFAGKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNNVITLSTFRNAEFLQAYGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYEAALAVLKA | cellular response to oxidative stress cytoplasm; cytosol; periplasmic space hydroperoxide reductase activity thioredoxin peroxidase activity Escherichia coli 3D-structure Antioxidant Cytoplasm Direct protein sequencing Disulfide bond Oxidoreductase Periplasm Peroxidase Redox-active center Reference proteome MSQTVHFQGN MSQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFAGKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNNVITLSTFRNAEFLQAYGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYEAALAVLKA |
carbohydrate metabolic process pentose-phosphate shunt, non-oxidative branch | cytosol; membrane | transaldolase activity transketolase or transaldolase activity | Escherichia coli | 3D-structure Cytoplasm Direct protein sequencing Pentose shunt Reference proteome Schiff base Transferase | MTDKLTSLRQ | MTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPEYRKLIDDAVAWAKQQSNDRAQQIVDATDKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIKLYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVFLISPFVGRILDWYKANTDKKEYAPAEDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEILELAGCDRLTIAPALLKELAESEGAIERKLSYTGEVKARPARITESEFLWQHNQDPMAVDKLAEGIRKFAIDQEKLEKMIGDLL | carbohydrate metabolic process pentose-phosphate shunt, non-oxidative branch cytosol; membrane transaldolase activity transketolase or transaldolase activity Escherichia coli 3D-structure Cytoplasm Direct protein sequencing Pentose shunt Reference proteome Schiff base Transferase MTDKLTSLRQ MTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQIPEYRKLIDDAVAWAKQQSNDRAQQIVDATDKLAVNIGLEILKLVPGRISTEVDARLSYDTEASIAKAKRLIKLYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVFLISPFVGRILDWYKANTDKKEYAPAEDPGVVSVSEIYQYYKEHGYETVVMGASFRNIGEILELAGCDRLTIAPALLKELAESEGAIERKLSYTGEVKARPARITESEFLWQHNQDPMAVDKLAEGIRKFAIDQEKLEKMIGDLL |
tRNA methylation tRNA N1-guanine methylation | cytosol | identical protein binding magnesium ion binding protein homodimerization activity tRNA (guanine(37)-N1)-methyltransferase activity | Escherichia coli | 3D-structure Cytoplasm Direct protein sequencing Methyltransferase Reference proteome S-adenosyl-L-methionine Transferase tRNA processing | MWIGIISLFP | MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHDRHRTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSELATNQKLILVCGRYEGIDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVLGHEASATEDSFAEGLLDCPHYTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWLRRPELLENLALTEEQARLLAEFKTEHAQQQHKHDGMA | tRNA methylation tRNA N1-guanine methylation cytosol identical protein binding magnesium ion binding protein homodimerization activity tRNA (guanine(37)-N1)-methyltransferase activity Escherichia coli 3D-structure Cytoplasm Direct protein sequencing Methyltransferase Reference proteome S-adenosyl-L-methionine Transferase tRNA processing MWIGIISLFP MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHDRHRTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSELATNQKLILVCGRYEGIDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVLGHEASATEDSFAEGLLDCPHYTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWLRRPELLENLALTEEQARLLAEFKTEHAQQQHKHDGMA |
aromatic amino acid family biosynthetic process tryptophan biosynthetic process | cytoplasm; cytosol | identical protein binding protein homodimerization activity pyridoxal phosphate binding tryptophan synthase activity | Escherichia coli | 3D-structure Amino-acid biosynthesis Aromatic amino acid biosynthesis Direct protein sequencing Lyase Pyridoxal phosphate Reference proteome Tryptophan biosynthesis | MTTLLNPYFG | MTTLLNPYFGEFGGMYVPQILMPALRQLEEAFVSAQKDPEFQAQFNDLLKNYAGRPTALTKCQNITAGTNTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKTEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILEREGRLPDAVIACVGGGSNAIGMFADFINETNVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTEDGQIEESYSISAGLDFPSVGPQHAYLNSTGRADYVSITDDEALEAFKTLCLHEGIIPALESSHALAHALKMMRENPDKEQLLVVNLSGRGDKDIFTVHDILKARGEI | aromatic amino acid family biosynthetic process tryptophan biosynthetic process cytoplasm; cytosol identical protein binding protein homodimerization activity pyridoxal phosphate binding tryptophan synthase activity Escherichia coli 3D-structure Amino-acid biosynthesis Aromatic amino acid biosynthesis Direct protein sequencing Lyase Pyridoxal phosphate Reference proteome Tryptophan biosynthesis MTTLLNPYFG MTTLLNPYFGEFGGMYVPQILMPALRQLEEAFVSAQKDPEFQAQFNDLLKNYAGRPTALTKCQNITAGTNTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKTEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILEREGRLPDAVIACVGGGSNAIGMFADFINETNVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTEDGQIEESYSISAGLDFPSVGPQHAYLNSTGRADYVSITDDEALEAFKTLCLHEGIIPALESSHALAHALKMMRENPDKEQLLVVNLSGRGDKDIFTVHDILKARGEI |
dTMP biosynthetic process dTTP biosynthetic process methylation regulation of translation response to radiation | cytosol | magnesium ion binding protein homodimerization activity RNA binding thymidylate synthase activity | Escherichia coli | 3D-structure Cytoplasm Direct protein sequencing Formylation Methyltransferase Nucleotide biosynthesis Reference proteome Repressor RNA-binding Transferase Translation regulation | MKQYLELMQK | MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDYRFEDFEIEGYDPHPGIKAPVAI | dTMP biosynthetic process dTTP biosynthetic process methylation regulation of translation response to radiation cytosol magnesium ion binding protein homodimerization activity RNA binding thymidylate synthase activity Escherichia coli 3D-structure Cytoplasm Direct protein sequencing Formylation Methyltransferase Nucleotide biosynthesis Reference proteome Repressor RNA-binding Transferase Translation regulation MKQYLELMQK MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPLVTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWPTPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHLQLSREPRPLPKLIIKRKPESIFDYRFEDFEIEGYDPHPGIKAPVAI |
L-cysteine catabolic process Mo-molybdopterin cofactor biosynthetic process tRNA wobble position uridine thiolation | cytosol; IscS-TusA complex | sulfur carrier activity | Escherichia coli | 3D-structure Cytoplasm Reference proteome tRNA processing | MTDLFSSPDH | MTDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRKGG | L-cysteine catabolic process Mo-molybdopterin cofactor biosynthetic process tRNA wobble position uridine thiolation cytosol; IscS-TusA complex sulfur carrier activity Escherichia coli 3D-structure Cytoplasm Reference proteome tRNA processing MTDLFSSPDH MTDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRKGG |
protein homotetramerization RNA destabilization | protein-containing complex | ATP binding carbohydrate derivative binding GTP binding identical protein binding molecular adaptor activity RNA binding | Escherichia coli | 3D-structure Acetylation ATP-binding GTP-binding Nucleotide-binding Reference proteome RNA-binding | MVLMIVSGRS | MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARTLADREISAAVSIDVRNMPESPEIFEQAMSNLPDAFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDKESDLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSYLTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRHRTLEKRKP | protein homotetramerization RNA destabilization protein-containing complex ATP binding carbohydrate derivative binding GTP binding identical protein binding molecular adaptor activity RNA binding Escherichia coli 3D-structure Acetylation ATP-binding GTP-binding Nucleotide-binding Reference proteome RNA-binding MVLMIVSGRS MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARTLADREISAAVSIDVRNMPESPEIFEQAMSNLPDAFSPQLLFLDADRNTLIRRYSDTRRLHPLSSKNLSLESAIDKESDLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKRERELTMVFESFGFKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNFIYQTRSYLELWLPMLETNNRSYLTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRHRTLEKRKP |
maturation of SSU-rRNA response to heat ribosomal small subunit biogenesis ribosome biogenesis rRNA processing transcription antitermination translation | cytoplasm | metalloendopeptidase activity nickel cation binding RNA endonuclease activity, producing 3'-phosphomonoesters zinc ion binding | Escherichia coli | 3D-structure Cytoplasm Endonuclease Hydrolase Metal-binding Nuclease Reference proteome Ribosome biogenesis rRNA processing Zinc | MSQVILDLQL | MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQFQEESEVTIRVVDTAESHSLNLTYRGKDKPTNVLSFPFEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAEKE | maturation of SSU-rRNA response to heat ribosomal small subunit biogenesis ribosome biogenesis rRNA processing transcription antitermination translation cytoplasm metalloendopeptidase activity nickel cation binding RNA endonuclease activity, producing 3'-phosphomonoesters zinc ion binding Escherichia coli 3D-structure Cytoplasm Endonuclease Hydrolase Metal-binding Nuclease Reference proteome Ribosome biogenesis rRNA processing Zinc MSQVILDLQL MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQFQEESEVTIRVVDTAESHSLNLTYRGKDKPTNVLSFPFEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAEKE |
UMP salvage uracil salvage | cytoplasm; cytosol; membrane | GTP binding guanosine tetraphosphate binding identical protein binding magnesium ion binding uracil phosphoribosyltransferase activity | Escherichia coli | 3D-structure Allosteric enzyme Direct protein sequencing Glycosyltransferase GTP-binding Magnesium Nucleotide-binding Reference proteome Transferase | MKIVEVKHPL | MKIVEVKHPLVKHKLGLMREQDISTKRFRELASEVGSLLTYEATADLETEKVTIEGWNGPVEIDQIKGKKITVVPILRAGLGMMDGVLENVPSARISVVGMYRNEETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLVAAPEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK | UMP salvage uracil salvage cytoplasm; cytosol; membrane GTP binding guanosine tetraphosphate binding identical protein binding magnesium ion binding uracil phosphoribosyltransferase activity Escherichia coli 3D-structure Allosteric enzyme Direct protein sequencing Glycosyltransferase GTP-binding Magnesium Nucleotide-binding Reference proteome Transferase MKIVEVKHPL MKIVEVKHPLVKHKLGLMREQDISTKRFRELASEVGSLLTYEATADLETEKVTIEGWNGPVEIDQIKGKKITVVPILRAGLGMMDGVLENVPSARISVVGMYRNEETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLVAAPEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK |
nucleotide-excision repair nucleotide-excision repair, DNA damage recognition nucleotide-excision repair, preincision complex assembly response to radiation SOS response | cytoplasm; excinuclease repair complex | ATP binding ATP hydrolysis activity DNA binding excinuclease ABC activity identical protein binding | Escherichia coli | 3D-structure ATP-binding Cytoplasm Direct protein sequencing DNA damage DNA excision DNA repair Excision nuclease Nucleotide-binding Reference proteome SOS response | MSKPFKLNSA | MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS | nucleotide-excision repair nucleotide-excision repair, DNA damage recognition nucleotide-excision repair, preincision complex assembly response to radiation SOS response cytoplasm; excinuclease repair complex ATP binding ATP hydrolysis activity DNA binding excinuclease ABC activity identical protein binding Escherichia coli 3D-structure ATP-binding Cytoplasm Direct protein sequencing DNA damage DNA excision DNA repair Excision nuclease Nucleotide-binding Reference proteome SOS response MSKPFKLNSA MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS |
DNA damage response nucleotide-excision repair response to radiation SOS response | cytoplasm; excinuclease repair complex | DNA binding excinuclease ABC activity | Escherichia coli | 3D-structure Cytoplasm DNA damage DNA excision DNA repair Excision nuclease Reference proteome SOS response | MSDQFDAKAF | MSDQFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALVAQIQQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRGAKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVEGLVSEEEYAQQVEYVRLFLSGKDDQVLTQLISRMETASQNLEFEEAARIRDQIQAVRRVTEKQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELSEVVETFVGQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLSELAGRKINVQTKPRGDRARYLKLARTNAATALTSKLSQQSTVHQRLTALASVLKLPEVKRMECFDISHTMGEQTVASCVVFDANGPLRAEYRRYNITGITPGDDYAAMNQVLRRRYGKAIDDSKIPDVILIDGGKGQLAQAKNVFAELDVSWDKNHPLLLGVAKGADRKAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESHDHAIGGHRKKRAKVKNTSSLETIEGVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIFWSLKH | DNA damage response nucleotide-excision repair response to radiation SOS response cytoplasm; excinuclease repair complex DNA binding excinuclease ABC activity Escherichia coli 3D-structure Cytoplasm DNA damage DNA excision DNA repair Excision nuclease Reference proteome SOS response MSDQFDAKAF MSDQFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALVAQIQQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRGAKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVEGLVSEEEYAQQVEYVRLFLSGKDDQVLTQLISRMETASQNLEFEEAARIRDQIQAVRRVTEKQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELSEVVETFVGQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLSELAGRKINVQTKPRGDRARYLKLARTNAATALTSKLSQQSTVHQRLTALASVLKLPEVKRMECFDISHTMGEQTVASCVVFDANGPLRAEYRRYNITGITPGDDYAAMNQVLRRRYGKAIDDSKIPDVILIDGGKGQLAQAKNVFAELDVSWDKNHPLLLGVAKGADRKAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESHDHAIGGHRKKRAKVKNTSSLETIEGVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIFWSLKH |
DNA catabolic process mismatch repair | cytosol; exodeoxyribonuclease VII complex | exodeoxyribonuclease VII activity | Escherichia coli | Cytoplasm Direct protein sequencing Exonuclease Hydrolase Nuclease Reference proteome | MPKKNEAPAS | MPKKNEAPASFEKALSELEQIVTRLESGDLPLEEALNEFERGVQLARQGQAKLQQAEQRVQILLSDNEDASLTPFTPDNE | DNA catabolic process mismatch repair cytosol; exodeoxyribonuclease VII complex exodeoxyribonuclease VII activity Escherichia coli Cytoplasm Direct protein sequencing Exonuclease Hydrolase Nuclease Reference proteome MPKKNEAPAS MPKKNEAPASFEKALSELEQIVTRLESGDLPLEEALNEFERGVQLARQGQAKLQQAEQRVQILLSDNEDASLTPFTPDNE |
cobalt ion transport iron ion import across plasma membrane zinc ion import across plasma membrane zinc ion transmembrane transport zinc ion transport | membrane; plasma membrane | ferrous iron transmembrane transporter activity metal ion binding zinc ion transmembrane transporter activity | Escherichia coli | Cadmium Cell inner membrane Cell membrane Cobalt Cobalt transport Ion transport Iron Iron transport Manganese Membrane Metal-binding Reference proteome Transmembrane Transmembrane helix Transport Zinc Zinc transport | MSVPLILTIL | MSVPLILTILAGAATFIGAFLGVLGQKPSNRLLAFSLGFAAGIMLLISLMEMLPAALAAEGMSPVLGYGMFIFGLLGYFGLDRMLPHAHPQDLMQKSVQPLPKSIKRTAILLTLGISLHNFPEGIATFVTASSNLELGFGIALAVALHNIPEGLAVAGPVYAATGSKRTAILWAGISGLAEILGGVLAWLILGSMISPVVMAAIMAAVAGIMVALSVDELMPLAKEIDPNNNPSYGVLCGMSVMGFSLVLLQTAGIG | cobalt ion transport iron ion import across plasma membrane zinc ion import across plasma membrane zinc ion transmembrane transport zinc ion transport membrane; plasma membrane ferrous iron transmembrane transporter activity metal ion binding zinc ion transmembrane transporter activity Escherichia coli Cadmium Cell inner membrane Cell membrane Cobalt Cobalt transport Ion transport Iron Iron transport Manganese Membrane Metal-binding Reference proteome Transmembrane Transmembrane helix Transport Zinc Zinc transport MSVPLILTIL MSVPLILTILAGAATFIGAFLGVLGQKPSNRLLAFSLGFAAGIMLLISLMEMLPAALAAEGMSPVLGYGMFIFGLLGYFGLDRMLPHAHPQDLMQKSVQPLPKSIKRTAILLTLGISLHNFPEGIATFVTASSNLELGFGIALAVALHNIPEGLAVAGPVYAATGSKRTAILWAGISGLAEILGGVLAWLILGSMISPVVMAAIMAAVAGIMVALSVDELMPLAKEIDPNNNPSYGVLCGMSVMGFSLVLLQTAGIG |
negative regulation of ribosome biogenesis ribosome biogenesis | cytosol | GTPase activator activity | Escherichia coli | GTPase activation Reference proteome Ribosome biogenesis | MKPSSSNSRS | MKPSSSNSRSKGHAKARRKTREELDQEARDRKRQKKRRGHAPGSRAAGGNTTSGSKGQNAPKDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAELELLETDERLDALLERLEAGETLSAEEQSWVDAKLDRIDELMQKLGLSYDDDEEEEEDEKQEDMMRLLRGN | negative regulation of ribosome biogenesis ribosome biogenesis cytosol GTPase activator activity Escherichia coli GTPase activation Reference proteome Ribosome biogenesis MKPSSSNSRS MKPSSSNSRSKGHAKARRKTREELDQEARDRKRQKKRRGHAPGSRAAGGNTTSGSKGQNAPKDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAELELLETDERLDALLERLEAGETLSAEEQSWVDAKLDRIDELMQKLGLSYDDDEEEEEDEKQEDMMRLLRGN |
ribosome biogenesis rRNA 5'-end processing | cytoplasm | 3'-5'-DNA exonuclease activity | Escherichia coli | 3D-structure Cytoplasm Hydrolase Nuclease Reference proteome Ribosome biogenesis | MSGTLLAFDF | MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY | ribosome biogenesis rRNA 5'-end processing cytoplasm 3'-5'-DNA exonuclease activity Escherichia coli 3D-structure Cytoplasm Hydrolase Nuclease Reference proteome Ribosome biogenesis MSGTLLAFDF MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY |
RNA (guanine-N7)-methylation tRNA (guanine-N7)-methylation tRNA methylation | tRNA methyltransferase complex | tRNA (guanine(46)-N7)-methyltransferase activity | Escherichia coli | 3D-structure Methyltransferase Reference proteome S-adenosyl-L-methionine Transferase tRNA processing | MKNDVISPEF | MKNDVISPEFDENGRPLRRIRSFVRRQGRLTKGQEHALENYWPVMGVEFSEDMLDFPALFGREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYKNLSESNDYVPRPASRPVTKFEQRGHRLGHGVWDLMFERVK | RNA (guanine-N7)-methylation tRNA (guanine-N7)-methylation tRNA methylation tRNA methyltransferase complex tRNA (guanine(46)-N7)-methyltransferase activity Escherichia coli 3D-structure Methyltransferase Reference proteome S-adenosyl-L-methionine Transferase tRNA processing MKNDVISPEF MKNDVISPEFDENGRPLRRIRSFVRRQGRLTKGQEHALENYWPVMGVEFSEDMLDFPALFGREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYKNLSESNDYVPRPASRPVTKFEQRGHRLGHGVWDLMFERVK |
rRNA base methylation rRNA methylation | cytoplasm | protein homodimerization activity ribosome binding rRNA (pseudouridine-N3-)-methyltransferase activity | Escherichia coli | 3D-structure Cytoplasm Methyltransferase Reference proteome rRNA processing S-adenosyl-L-methionine Transferase | MKLQLVAVGT | MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRGKNADIKRILDKEGEQMLAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLIGGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE | rRNA base methylation rRNA methylation cytoplasm protein homodimerization activity ribosome binding rRNA (pseudouridine-N3-)-methyltransferase activity Escherichia coli 3D-structure Cytoplasm Methyltransferase Reference proteome rRNA processing S-adenosyl-L-methionine Transferase MKLQLVAVGT MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRGKNADIKRILDKEGEQMLAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLIGGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE |
DNA replication, synthesis of RNA primer DNA unwinding involved in DNA replication DNA-templated DNA replication protein homotrimerization replication fork processing | DnaB-DnaC-DnaT-PriA-PriB complex; DnaB-DnaC-DnaT-PriA-PriC complex; primosome complex | identical protein binding magnesium ion binding single-stranded DNA binding | Escherichia coli | 3D-structure Direct protein sequencing DNA replication Primosome Reference proteome | MSSRVLTPDV | MSSRVLTPDVVGIDALVHDHQTVLAKAEGGVVAVFANNAPAFYAVTPARLAELLALEEKLARPGSDVALDDQLYQEPQAAPVAVPMGKFAMYPDWQPDADFIRLAALWGVALREPVTTEELASFIAYWQAEGKVFHHVQWQQKLARSLQIGRASNGGLPKRDVNTVSEPDSQIPPGFRG | DNA replication, synthesis of RNA primer DNA unwinding involved in DNA replication DNA-templated DNA replication protein homotrimerization replication fork processing DnaB-DnaC-DnaT-PriA-PriB complex; DnaB-DnaC-DnaT-PriA-PriC complex; primosome complex identical protein binding magnesium ion binding single-stranded DNA binding Escherichia coli 3D-structure Direct protein sequencing DNA replication Primosome Reference proteome MSSRVLTPDV MSSRVLTPDVVGIDALVHDHQTVLAKAEGGVVAVFANNAPAFYAVTPARLAELLALEEKLARPGSDVALDDQLYQEPQAAPVAVPMGKFAMYPDWQPDADFIRLAALWGVALREPVTTEELASFIAYWQAEGKVFHHVQWQQKLARSLQIGRASNGGLPKRDVNTVSEPDSQIPPGFRG |
RNA catabolic process RNA processing | bacterial degradosome; cytosol; membrane | ATP binding ATP hydrolysis activity disordered domain specific binding protein homodimerization activity RNA binding RNA helicase activity | Escherichia coli | ATP-binding Cytoplasm Direct protein sequencing Helicase Hydrolase Nucleotide-binding Reference proteome RNA-binding | MSKTHLTEQK | MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG | RNA catabolic process RNA processing bacterial degradosome; cytosol; membrane ATP binding ATP hydrolysis activity disordered domain specific binding protein homodimerization activity RNA binding RNA helicase activity Escherichia coli ATP-binding Cytoplasm Direct protein sequencing Helicase Hydrolase Nucleotide-binding Reference proteome RNA-binding MSKTHLTEQK MSKTHLTEQKFSDFALHPKVVEALEKKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYIEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRPRTGNGPRRTGAPRNRRRSG |
phosphatidylethanolamine biosynthetic process protein autoprocessing zymogen activation | plasma membrane | phosphatidylserine decarboxylase activity protein homodimerization activity | Escherichia coli | Cell membrane Decarboxylase Direct protein sequencing Formylation Lipid biosynthesis Lipid metabolism Lyase Membrane Phospholipid biosynthesis Phospholipid metabolism Pyruvate Reference proteome Zymogen | MLNSFKLSLQ | MLNSFKLSLQYILPKLWLTRLAGWGASKRAGWLTKLVIDLFVKYYKVDMKEAQKPDTASYRTFNEFFVRPLRDEVRPIDTDPNVLVMPADGVISQLGKIEEDKILQAKGHNYSLEALLAGNYLMADLFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVGSIETVWAGTITPPREGIIKRWTWPAGENDGSVALLKGQEMGRFKLGSTVINLFAPGKVNLVEQLESLSVTKIGQPLAVSTETFVTPDAEPAPLPAEEIEAEHDASPLVDDKKDQV | phosphatidylethanolamine biosynthetic process protein autoprocessing zymogen activation plasma membrane phosphatidylserine decarboxylase activity protein homodimerization activity Escherichia coli Cell membrane Decarboxylase Direct protein sequencing Formylation Lipid biosynthesis Lipid metabolism Lyase Membrane Phospholipid biosynthesis Phospholipid metabolism Pyruvate Reference proteome Zymogen MLNSFKLSLQ MLNSFKLSLQYILPKLWLTRLAGWGASKRAGWLTKLVIDLFVKYYKVDMKEAQKPDTASYRTFNEFFVRPLRDEVRPIDTDPNVLVMPADGVISQLGKIEEDKILQAKGHNYSLEALLAGNYLMADLFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYVPGDLFSVNHLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVGSIETVWAGTITPPREGIIKRWTWPAGENDGSVALLKGQEMGRFKLGSTVINLFAPGKVNLVEQLESLSVTKIGQPLAVSTETFVTPDAEPAPLPAEEIEAEHDASPLVDDKKDQV |
selenocysteine biosynthetic process seryl-tRNA aminoacylation | cytosol | ATP binding identical protein binding magnesium ion binding serine-tRNA ligase activity | Escherichia coli | 3D-structure Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome | MLDPNLLRNE | MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG | selenocysteine biosynthetic process seryl-tRNA aminoacylation cytosol ATP binding identical protein binding magnesium ion binding serine-tRNA ligase activity Escherichia coli 3D-structure Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome MLDPNLLRNE MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG |
asparaginyl-tRNA aminoacylation tRNA aminoacylation for protein translation | cytoplasm | asparagine-tRNA ligase activity ATP binding nucleic acid binding protein homodimerization activity | Escherichia coli | Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Direct protein sequencing Ligase Nucleotide-binding Protein biosynthesis Reference proteome | MSVVPVADVL | MSVVPVADVLQGRVAVDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNASF | asparaginyl-tRNA aminoacylation tRNA aminoacylation for protein translation cytoplasm asparagine-tRNA ligase activity ATP binding nucleic acid binding protein homodimerization activity Escherichia coli Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Direct protein sequencing Ligase Nucleotide-binding Protein biosynthesis Reference proteome MSVVPVADVL MSVVPVADVLQGRVAVDSEVTVRGWVRTRRDSKAGISFLAVYDGSCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQFEIQASKVEVAGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKAVLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRKFENPVYWGVDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRNASF |
negative regulation of translational initiation regulation of translation response to antibiotic threonyl-tRNA aminoacylation tRNA aminoacylation tRNA aminoacylation for protein translation | cytoplasm; cytosol | aminoacyl-tRNA editing activity aminoacyl-tRNA ligase activity ATP binding mRNA 5'-UTR binding mRNA regulatory element binding translation repressor activity protein homodimerization activity RNA binding threonine-tRNA ligase activity tRNA binding zinc ion binding | Escherichia coli | 3D-structure Acetylation Aminoacyl-tRNA synthetase Antibiotic resistance ATP-binding Cytoplasm Ligase Metal-binding Nucleotide-binding Protein biosynthesis Reference proteome Repressor RNA-binding Translation regulation tRNA-binding Zinc | MPVITLPDGS | MPVITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLEE | negative regulation of translational initiation regulation of translation response to antibiotic threonyl-tRNA aminoacylation tRNA aminoacylation tRNA aminoacylation for protein translation cytoplasm; cytosol aminoacyl-tRNA editing activity aminoacyl-tRNA ligase activity ATP binding mRNA 5'-UTR binding mRNA regulatory element binding translation repressor activity protein homodimerization activity RNA binding threonine-tRNA ligase activity tRNA binding zinc ion binding Escherichia coli 3D-structure Acetylation Aminoacyl-tRNA synthetase Antibiotic resistance ATP-binding Cytoplasm Ligase Metal-binding Nucleotide-binding Protein biosynthesis Reference proteome Repressor RNA-binding Translation regulation tRNA-binding Zinc MPVITLPDGS MPVITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNIPFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAGIRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLEE |
cell division chromosome organization chromosome segregation protein homotetramerization regulation of DNA-templated transcription | cytoplasm; DNA replication termination region | phospholipid binding protein homodimerization activity sequence-specific DNA binding | Escherichia coli | 3D-structure Cell cycle Cell division Cytoplasm DNA-binding Reference proteome | MKYQQLENLE | MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDVLLSLENEPVLVNGWIDKHMNPELVNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFIVWQRLAGLAQRRGKTLSETIVQLIEDAENKEKYANKMSSLKQDLQALLGKE | cell division chromosome organization chromosome segregation protein homotetramerization regulation of DNA-templated transcription cytoplasm; DNA replication termination region phospholipid binding protein homodimerization activity sequence-specific DNA binding Escherichia coli 3D-structure Cell cycle Cell division Cytoplasm DNA-binding Reference proteome MKYQQLENLE MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDVLLSLENEPVLVNGWIDKHMNPELVNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFIVWQRLAGLAQRRGKTLSETIVQLIEDAENKEKYANKMSSLKQDLQALLGKE |
lysyl-tRNA aminoacylation tRNA aminoacylation for protein translation | cytosol; membrane | ATP binding ligase activity lysine-tRNA ligase activity magnesium ion binding protein homodimerization activity tRNA binding | Escherichia coli | 3D-structure Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Direct protein sequencing Ligase Magnesium Metal-binding Nucleotide-binding Protein biosynthesis Reference proteome | MSEQHAQGAD | MSEQHAQGADAVVDLNNELKTRREKLANLREQGIAFPNDFRRDHTSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPAMRPVK | lysyl-tRNA aminoacylation tRNA aminoacylation for protein translation cytosol; membrane ATP binding ligase activity lysine-tRNA ligase activity magnesium ion binding protein homodimerization activity tRNA binding Escherichia coli 3D-structure Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Direct protein sequencing Ligase Magnesium Metal-binding Nucleotide-binding Protein biosynthesis Reference proteome MSEQHAQGAD MSEQHAQGADAVVDLNNELKTRREKLANLREQGIAFPNDFRRDHTSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGDILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLQDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGAAARPFITHHNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIKKYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFLDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPAMRPVK |
cellular response to heat lysyl-tRNA aminoacylation RNA capping tRNA aminoacylation for protein translation | cytosol; membrane | ATP binding ligase activity lysine-tRNA ligase activity magnesium ion binding protein homodimerization activity tRNA binding | Escherichia coli | 3D-structure Acetylation Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Direct protein sequencing Ligase Magnesium Metal-binding Nucleotide-binding Protein biosynthesis Reference proteome | MSEQETRGAN | MSEQETRGANEAIDFNDELRNRREKLAALRQQGVAFPNDFRRDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLFKTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFPAMRPQK | cellular response to heat lysyl-tRNA aminoacylation RNA capping tRNA aminoacylation for protein translation cytosol; membrane ATP binding ligase activity lysine-tRNA ligase activity magnesium ion binding protein homodimerization activity tRNA binding Escherichia coli 3D-structure Acetylation Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Direct protein sequencing Ligase Magnesium Metal-binding Nucleotide-binding Protein biosynthesis Reference proteome MSEQETRGAN MSEQETRGANEAIDFNDELRNRREKLAALRQQGVAFPNDFRRDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLFKTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKSRQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRTLAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGITVEKSWGLGRIVTEIFDEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGGREIGNGFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAGLGIGIDRMIMLFTNSHTIRDVILFPAMRPQK |
cellular response to acidic pH lysyl-tRNA aminoacylation | cytosol | acid-ammonia (or amide) ligase activity ATP binding lysine-tRNA ligase activity protein homodimerization activity protein-lysine lysyltransferase activity tRNA binding | Escherichia coli | 3D-structure ATP-binding Ligase Nucleotide-binding Reference proteome | MSETASWQPS | MSETASWQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCPAAESLSYQQAFLRYLEIDPLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA | cellular response to acidic pH lysyl-tRNA aminoacylation cytosol acid-ammonia (or amide) ligase activity ATP binding lysine-tRNA ligase activity protein homodimerization activity protein-lysine lysyltransferase activity tRNA binding Escherichia coli 3D-structure ATP-binding Ligase Nucleotide-binding Reference proteome MSETASWQPS MSETASWQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMSQATVTDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCPAAESLSYQQAFLRYLEIDPLSADKTQLREVAAKLDLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPASQASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQHPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA |
cell division chromosome segregation DNA transposition plasmid maintenance plasmid recombination resolution of DNA recombination intermediates | cytoplasm; Holliday junction resolvase complex | DNA binding site-specific recombinase activity tyrosine-based site-specific recombinase activity | Escherichia coli | 3D-structure Cell cycle Cell division Chromosome partition Cytoplasm Direct protein sequencing DNA integration DNA recombination DNA-binding Reference proteome | MTDLHTDVER | MTDLHTDVERYLRYLSVERQLSPITLLNYQRQLEAIINFASENGLQSWQQCDVTMVRNFAVRSRRKGLGAASLALRLSALRSFFDWLVSQNELKANPAKGVSAPKAPRHLPKNIDVDDMNRLLDIDINDPLAVRDRAMLEVMYGAGLRLSELVGLDIKHLDLESGEVWVMGKGSKERRLPIGRNAVAWIEHWLDLRDLFGSEDDALFLSKLGKRISARNVQKRFAEWGIKQGLNNHVHPHKLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYTHLDFQHLASVYDAAHPRAKRGK | cell division chromosome segregation DNA transposition plasmid maintenance plasmid recombination resolution of DNA recombination intermediates cytoplasm; Holliday junction resolvase complex DNA binding site-specific recombinase activity tyrosine-based site-specific recombinase activity Escherichia coli 3D-structure Cell cycle Cell division Chromosome partition Cytoplasm Direct protein sequencing DNA integration DNA recombination DNA-binding Reference proteome MTDLHTDVER MTDLHTDVERYLRYLSVERQLSPITLLNYQRQLEAIINFASENGLQSWQQCDVTMVRNFAVRSRRKGLGAASLALRLSALRSFFDWLVSQNELKANPAKGVSAPKAPRHLPKNIDVDDMNRLLDIDINDPLAVRDRAMLEVMYGAGLRLSELVGLDIKHLDLESGEVWVMGKGSKERRLPIGRNAVAWIEHWLDLRDLFGSEDDALFLSKLGKRISARNVQKRFAEWGIKQGLNNHVHPHKLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYTHLDFQHLASVYDAAHPRAKRGK |
cell division chromosome segregation DNA transposition plasmid maintenance resolution of DNA recombination intermediates response to radiation | cytoplasm; Holliday junction resolvase complex | DNA binding site-specific recombinase activity tyrosine-based site-specific recombinase activity | Escherichia coli | 3D-structure Cell cycle Cell division Chromosome partition Cytoplasm Direct protein sequencing DNA integration DNA recombination DNA-binding Reference proteome | MKQDLARIEQ | MKQDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLAERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA | cell division chromosome segregation DNA transposition plasmid maintenance resolution of DNA recombination intermediates response to radiation cytoplasm; Holliday junction resolvase complex DNA binding site-specific recombinase activity tyrosine-based site-specific recombinase activity Escherichia coli 3D-structure Cell cycle Cell division Chromosome partition Cytoplasm Direct protein sequencing DNA integration DNA recombination DNA-binding Reference proteome MKQDLARIEQ MKQDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLAERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA |
negative regulation of RNA catabolic process protein homotrimerization | cytosol; protein-containing complex | endoribonuclease inhibitor activity enzyme binding identical protein binding ribonuclease inhibitor activity | Escherichia coli | 3D-structure Cytoplasm Reference proteome | MKYDTSELCD | MKYDTSELCDIYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDIE | negative regulation of RNA catabolic process protein homotrimerization cytosol; protein-containing complex endoribonuclease inhibitor activity enzyme binding identical protein binding ribonuclease inhibitor activity Escherichia coli 3D-structure Cytoplasm Reference proteome MKYDTSELCD MKYDTSELCDIYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDIE |
bacterial-type flagellum assembly DNA-templated transcription positive regulation of bacterial-type flagellum assembly positive regulation of DNA-templated transcription | cytoplasm; transcription regulator complex | DNA binding | Escherichia coli | 3D-structure Activator Bacterial flagellum biogenesis Cytoplasm Disulfide bond DNA-binding Reference proteome Transcription Transcription regulation | MHTSELLKHI | MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMATTLAALTLPQMVKLAETNQLVCHFRFDSHQTITQLTQDSRVDDLQQIHTGIMLSTRLLNDVNQPEEALRKKRA | bacterial-type flagellum assembly DNA-templated transcription positive regulation of bacterial-type flagellum assembly positive regulation of DNA-templated transcription cytoplasm; transcription regulator complex DNA binding Escherichia coli 3D-structure Activator Bacterial flagellum biogenesis Cytoplasm Disulfide bond DNA-binding Reference proteome Transcription Transcription regulation MHTSELLKHI MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMATTLAALTLPQMVKLAETNQLVCHFRFDSHQTITQLTQDSRVDDLQQIHTGIMLSTRLLNDVNQPEEALRKKRA |
fatty acid metabolic process negative regulation of DNA-templated transcription positive regulation of DNA-templated transcription positive regulation of fatty acid biosynthetic process regulation of fatty acid metabolic process | cytosol | DNA binding DNA-binding transcription factor activity fatty-acyl-CoA binding protein homodimerization activity | Escherichia coli | 3D-structure Activator Cytoplasm Direct protein sequencing DNA-binding Fatty acid metabolism Lipid metabolism Reference proteome Repressor Transcription Transcription regulation | MVIKAQSPAG | MVIKAQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLLSVRTNISTIFIRTAFRQHPDKAQEVLATANEVADHADAFAELDYNIFRGLAFASGNPIYGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSALCSEGAHDQVYETVRRYGHESGEIWHRMQKNLPGDLAIQGR | fatty acid metabolic process negative regulation of DNA-templated transcription positive regulation of DNA-templated transcription positive regulation of fatty acid biosynthetic process regulation of fatty acid metabolic process cytosol DNA binding DNA-binding transcription factor activity fatty-acyl-CoA binding protein homodimerization activity Escherichia coli 3D-structure Activator Cytoplasm Direct protein sequencing DNA-binding Fatty acid metabolism Lipid metabolism Reference proteome Repressor Transcription Transcription regulation MVIKAQSPAG MVIKAQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLLSVRTNISTIFIRTAFRQHPDKAQEVLATANEVADHADAFAELDYNIFRGLAFASGNPIYGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSALCSEGAHDQVYETVRRYGHESGEIWHRMQKNLPGDLAIQGR |
pyrimidine nucleobase salvage response to xenobiotic stimulus thymine metabolic process | cytoplasm | 5'-nucleotidase activity manganese ion binding nucleotide binding phosphatase activity thymidylate 5'-phosphatase activity XMP 5'-nucleosidase activity | Escherichia coli | Cobalt Cytoplasm Hydrolase Magnesium Manganese Metal-binding Nucleotide-binding Reference proteome | MKWDWIFFDA | MKWDWIFFDADETLFTFDSFTGLQRMFLDYSVTFTAEDFQDYQAVNKPLWVDYQNGAITSLQLQHGRFESWAERLNVEPGKLNEAFINAMAEICTPLPGAVSLLNAIRGNAKIGIITNGFSALQQVRLERTGLRDYFDLLVISEEVGVAKPNKKIFDYALEQAGNPDRSRVLMVGDTAESDILGGINAGLATCWLNAHHREQPEGIAPTWTVSSLHELEQLLCKH | pyrimidine nucleobase salvage response to xenobiotic stimulus thymine metabolic process cytoplasm 5'-nucleotidase activity manganese ion binding nucleotide binding phosphatase activity thymidylate 5'-phosphatase activity XMP 5'-nucleosidase activity Escherichia coli Cobalt Cytoplasm Hydrolase Magnesium Manganese Metal-binding Nucleotide-binding Reference proteome MKWDWIFFDA MKWDWIFFDADETLFTFDSFTGLQRMFLDYSVTFTAEDFQDYQAVNKPLWVDYQNGAITSLQLQHGRFESWAERLNVEPGKLNEAFINAMAEICTPLPGAVSLLNAIRGNAKIGIITNGFSALQQVRLERTGLRDYFDLLVISEEVGVAKPNKKIFDYALEQAGNPDRSRVLMVGDTAESDILGGINAGLATCWLNAHHREQPEGIAPTWTVSSLHELEQLLCKH |
enterobactin biosynthetic process | cytosol | 1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity CoA hydrolase activity hydrolase activity, acting on ester bonds identical protein binding thiolester hydrolase activity | Escherichia coli | 3D-structure Cytoplasm Hydrolase Reference proteome | MIWKRHLTLD | MIWKRHLTLDELNATSDNTMVAHLGIVYTRLGDDVLEAEMPVDTRTHQPFGLLHGGASAALAETLGSMAGFMMTRDGQCVVGTELNATHHRPVSEGKVRGVCQPLHLGRQNQSWEIVVFDEQGRRCCTCRLGTAVLG | enterobactin biosynthetic process cytosol 1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity CoA hydrolase activity hydrolase activity, acting on ester bonds identical protein binding thiolester hydrolase activity Escherichia coli 3D-structure Cytoplasm Hydrolase Reference proteome MIWKRHLTLD MIWKRHLTLDELNATSDNTMVAHLGIVYTRLGDDVLEAEMPVDTRTHQPFGLLHGGASAALAETLGSMAGFMMTRDGQCVVGTELNATHHRPVSEGKVRGVCQPLHLGRQNQSWEIVVFDEQGRRCCTCRLGTAVLG |
Gram-negative-bacterium-type cell outer membrane assembly protein insertion into membrane | Bam protein complex; cell surface; membrane | identical protein binding | Escherichia coli | 3D-structure Cell outer membrane Lipoprotein Membrane Palmitate Reference proteome Signal | MAYSVQKSRL | MAYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDEAYLEAAPLAELHAPAGMILPVTSGDYAIPVTNGSGAVGKALDIRPPAQPLALVSGARTQFTGDTASLLVENGRGNTLWPQVVSVLQAKNYTITQRDDAGQTLTTDWVQWNRLDEDEQYRGRYQISVKPQGYQQAVTVKLLNLEQAGKPVADAASMQRYSTEMMNVISAGLDKSATDAANAAQNRASTTMDVQSAADDTGLPMLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNMAVTYKPLSDSDWQELGASDPGLASGDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDALVAVFQAAFSK | Gram-negative-bacterium-type cell outer membrane assembly protein insertion into membrane Bam protein complex; cell surface; membrane identical protein binding Escherichia coli 3D-structure Cell outer membrane Lipoprotein Membrane Palmitate Reference proteome Signal MAYSVQKSRL MAYSVQKSRLAKVAGVSLVLLLAACSSDSRYKRQVSGDEAYLEAAPLAELHAPAGMILPVTSGDYAIPVTNGSGAVGKALDIRPPAQPLALVSGARTQFTGDTASLLVENGRGNTLWPQVVSVLQAKNYTITQRDDAGQTLTTDWVQWNRLDEDEQYRGRYQISVKPQGYQQAVTVKLLNLEQAGKPVADAASMQRYSTEMMNVISAGLDKSATDAANAAQNRASTTMDVQSAADDTGLPMLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNMAVTYKPLSDSDWQELGASDPGLASGDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDALVAVFQAAFSK |
detection of virus DNA damage response monoatomic ion transport viral entry into host cell | cell outer membrane; membrane; outer membrane; outer membrane protein complex; outer membrane-bounded periplasmic space; pore complex | identical protein binding monoatomic ion transmembrane transporter activity porin activity | Escherichia coli | 3D-structure Cell outer membrane Conjugation Direct protein sequencing Disulfide bond Host-virus interaction Hydroxylation Ion transport Membrane Porin Reference proteome Repeat Signal Transmembrane Transmembrane beta strand Transport | MKKTAIAIAV | MKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADTKSNVYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQWTNNIGDAHTIGTRPDNGMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIKDVVTQPQA | detection of virus DNA damage response monoatomic ion transport viral entry into host cell cell outer membrane; membrane; outer membrane; outer membrane protein complex; outer membrane-bounded periplasmic space; pore complex identical protein binding monoatomic ion transmembrane transporter activity porin activity Escherichia coli 3D-structure Cell outer membrane Conjugation Direct protein sequencing Disulfide bond Host-virus interaction Hydroxylation Ion transport Membrane Porin Reference proteome Repeat Signal Transmembrane Transmembrane beta strand Transport MKKTAIAIAV MKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGFINNNGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGSVENGAYKAQGVQLTAKLGYPITDDLDIYTRLGGMVWRADTKSNVYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQWTNNIGDAHTIGTRPDNGMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIKDVVTQPQA |
lipid catabolic process phosphatidylglycerol metabolic process | cell outer membrane | 1-acyl-2-lysophosphatidylserine acylhydrolase activity calcium ion binding lysophospholipase activity phosphatidylserine 1-acylhydrolase activity phospholipase A1 activity phospholipase A2 activity phospholipase activity protein homodimerization activity | Escherichia coli | 3D-structure Calcium Cell outer membrane Direct protein sequencing Hydrolase Lipid degradation Lipid metabolism Membrane Metal-binding Reference proteome Signal Transmembrane Transmembrane beta strand | MRTLQGWLLP | MRTLQGWLLPVFMLPMAVYAQEATVKEVHDAPAVRGSIIANMLQEHDNPFTLYPYDTNYLIYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGILGPNSVLGASYTQKSWWQLSNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGYNHDSNGRSDPTSRSWNRLYTRLMAENGNWLVEVKPWYVVGNTDDNPDITKYMGYYQLKIGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQTRVGVGVMLNDLF | lipid catabolic process phosphatidylglycerol metabolic process cell outer membrane 1-acyl-2-lysophosphatidylserine acylhydrolase activity calcium ion binding lysophospholipase activity phosphatidylserine 1-acylhydrolase activity phospholipase A1 activity phospholipase A2 activity phospholipase activity protein homodimerization activity Escherichia coli 3D-structure Calcium Cell outer membrane Direct protein sequencing Hydrolase Lipid degradation Lipid metabolism Membrane Metal-binding Reference proteome Signal Transmembrane Transmembrane beta strand MRTLQGWLLP MRTLQGWLLPVFMLPMAVYAQEATVKEVHDAPAVRGSIIANMLQEHDNPFTLYPYDTNYLIYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGILGPNSVLGASYTQKSWWQLSNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGYNHDSNGRSDPTSRSWNRLYTRLMAENGNWLVEVKPWYVVGNTDDNPDITKYMGYYQLKIGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQTRVGVGVMLNDLF |
glycerophospholipid biosynthetic process peptidoglycan biosynthetic process phosphatidylglycerol biosynthetic process phospholipid catabolic process | cell outer membrane; plasma membrane | diacylglycerol diphosphate phosphatase activity phosphatidate phosphatase activity phosphatidylglycerophosphatase activity undecaprenyl-diphosphatase activity | Escherichia coli | 3D-structure Cell inner membrane Cell membrane Cell outer membrane Direct protein sequencing Hydrolase Lipid degradation Lipid metabolism Membrane Phospholipid degradation Phospholipid metabolism Reference proteome Transmembrane Transmembrane helix | MRSIARRTAV | MRSIARRTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWVTETVTQPWGVITHLILFGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQEPRPFVIWLEKTHHIPVDEFYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFPSGHTMFAASWALLAVGLLWPRRRTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLISWALVAVATWLAQRICGPLTPPAEENREIAQREQES | glycerophospholipid biosynthetic process peptidoglycan biosynthetic process phosphatidylglycerol biosynthetic process phospholipid catabolic process cell outer membrane; plasma membrane diacylglycerol diphosphate phosphatase activity phosphatidate phosphatase activity phosphatidylglycerophosphatase activity undecaprenyl-diphosphatase activity Escherichia coli 3D-structure Cell inner membrane Cell membrane Cell outer membrane Direct protein sequencing Hydrolase Lipid degradation Lipid metabolism Membrane Phospholipid degradation Phospholipid metabolism Reference proteome Transmembrane Transmembrane helix MRSIARRTAV MRSIARRTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWVTETVTQPWGVITHLILFGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQEPRPFVIWLEKTHHIPVDEFYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFPSGHTMFAASWALLAVGLLWPRRRTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLISWALVAVATWLAQRICGPLTPPAEENREIAQREQES |
phosphatidylglycerol biosynthetic process phospholipid catabolic process | cell outer membrane; plasma membrane | diacylglycerol diphosphate phosphatase activity phosphatidate phosphatase activity phosphatidylglycerophosphatase activity undecaprenyl-diphosphatase activity | Escherichia coli O157:H7 | Cell inner membrane Cell membrane Cell outer membrane Hydrolase Lipid degradation Lipid metabolism Membrane Phospholipid degradation Phospholipid metabolism Reference proteome Transmembrane Transmembrane helix | MRSIARRTAV | MRSIARRTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWVTETVTQPWGVITHLILFGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQEPRPFVIWLEKTHHIPVDEFYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFPSGHTMFAASWALLAVGLLWPRRRTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLISWALVAVATWLAQRICGPLTPPAEENREIAQREQES | phosphatidylglycerol biosynthetic process phospholipid catabolic process cell outer membrane; plasma membrane diacylglycerol diphosphate phosphatase activity phosphatidate phosphatase activity phosphatidylglycerophosphatase activity undecaprenyl-diphosphatase activity Escherichia coli O157:H7Cell inner membrane Cell membrane Cell outer membrane Hydrolase Lipid degradation Lipid metabolism Membrane Phospholipid degradation Phospholipid metabolism Reference proteome Transmembrane Transmembrane helix MRSIARRTAV MRSIARRTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWVTETVTQPWGVITHLILFGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQEPRPFVIWLEKTHHIPVDEFYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFPSGHTMFAASWALLAVGLLWPRRRTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLISWALVAVATWLAQRICGPLTPPAEENREIAQREQES |
phosphatidylglycerol biosynthetic process phospholipid catabolic process | cell outer membrane; plasma membrane | diacylglycerol diphosphate phosphatase activity phosphatidate phosphatase activity phosphatidylglycerophosphatase activity undecaprenyl-diphosphatase activity | Shigella flexneri | Cell inner membrane Cell membrane Cell outer membrane Hydrolase Lipid degradation Lipid metabolism Membrane Phospholipid degradation Phospholipid metabolism Reference proteome Transmembrane Transmembrane helix | MRSIARRTAV | MRSIARRTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWVTETVTQPWGVITHLILFGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQEPRPFVIWLEKTHHIPVDEFYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFPSGHTMFAASWALLAVGLLWPRRRTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLISWALVAVATWLAQRICGPLTPPAEENREIAQREQES | phosphatidylglycerol biosynthetic process phospholipid catabolic process cell outer membrane; plasma membrane diacylglycerol diphosphate phosphatase activity phosphatidate phosphatase activity phosphatidylglycerophosphatase activity undecaprenyl-diphosphatase activity Shigella flexneriCell inner membrane Cell membrane Cell outer membrane Hydrolase Lipid degradation Lipid metabolism Membrane Phospholipid degradation Phospholipid metabolism Reference proteome Transmembrane Transmembrane helix MRSIARRTAV MRSIARRTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWVTETVTQPWGVITHLILFGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQEPRPFVIWLEKTHHIPVDEFYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFPSGHTMFAASWALLAVGLLWPRRRTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLISWALVAVATWLAQRICGPLTPPAEENREIAQREQES |
cell wall organization peptidoglycan catabolic process peptidoglycan turnover | cell outer membrane; outer membrane-bounded periplasmic space | hydrolase activity, hydrolyzing O-glycosyl compounds lytic transglycosylase activity | Escherichia coli | 3D-structure Cell outer membrane Cell wall biogenesis/degradation Direct protein sequencing Lipoprotein Lyase Membrane Palmitate Reference proteome Signal | MKGRWVKYLL | MKGRWVKYLLMGTVVAMLAACSSKPTDRGQQYKDGKFTQPFSLVNQPDAVGAPINAGDFAEQINHIRNSSPRLYGNQSNVYNAVQEWLRAGGDTRNMRQFGIDAWQMEGADNYGNVQFTGYYTPVIQARHTRQGEFQYPIYRMPPKRGRLPSRAEIYAGALSDKYILAYSNSLMDNFIMDVQGSGYIDFGDGSPLNFFSYAGKNGHAYRSIGKVLIDRGEVKKEDMSMQAIRHWGETHSEAEVRELLEQNPSFVFFKPQSFAPVKGASAVPLVGRASVASDRSIIPPGTTLLAEVPLLDNNGKFNGQYELRLMVALDVGGAIKGQHFDIYQGIGPEAGHRAGWYNHYGRVWVLKTAPGAGNVFSG | cell wall organization peptidoglycan catabolic process peptidoglycan turnover cell outer membrane; outer membrane-bounded periplasmic space hydrolase activity, hydrolyzing O-glycosyl compounds lytic transglycosylase activity Escherichia coli 3D-structure Cell outer membrane Cell wall biogenesis/degradation Direct protein sequencing Lipoprotein Lyase Membrane Palmitate Reference proteome Signal MKGRWVKYLL MKGRWVKYLLMGTVVAMLAACSSKPTDRGQQYKDGKFTQPFSLVNQPDAVGAPINAGDFAEQINHIRNSSPRLYGNQSNVYNAVQEWLRAGGDTRNMRQFGIDAWQMEGADNYGNVQFTGYYTPVIQARHTRQGEFQYPIYRMPPKRGRLPSRAEIYAGALSDKYILAYSNSLMDNFIMDVQGSGYIDFGDGSPLNFFSYAGKNGHAYRSIGKVLIDRGEVKKEDMSMQAIRHWGETHSEAEVRELLEQNPSFVFFKPQSFAPVKGASAVPLVGRASVASDRSIIPPGTTLLAEVPLLDNNGKFNGQYELRLMVALDVGGAIKGQHFDIYQGIGPEAGHRAGWYNHYGRVWVLKTAPGAGNVFSG |
Gram-negative-bacterium-type cell outer membrane assembly protein insertion into membrane response to antibiotic | Bam protein complex; membrane | identical protein binding protein-macromolecule adaptor activity | Escherichia coli | 3D-structure Cell outer membrane Lipoprotein Membrane Palmitate Reference proteome Signal | MRCKTLTAAA | MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTANDVSKIRVGMTQQQVAYALGTPLMSDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLTNIDNKPALSGN | Gram-negative-bacterium-type cell outer membrane assembly protein insertion into membrane response to antibiotic Bam protein complex; membrane identical protein binding protein-macromolecule adaptor activity Escherichia coli 3D-structure Cell outer membrane Lipoprotein Membrane Palmitate Reference proteome Signal MRCKTLTAAA MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTANDVSKIRVGMTQQQVAYALGTPLMSDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLTNIDNKPALSGN |
protein modification process | cytoplasm | N-acetyltransferase activity peptide-alanine-alpha-N-acetyltransferase activity peptide-lysine-N-acetyltransferase activity | Escherichia coli | Acyltransferase Cytoplasm Reference proteome Transferase | MNTISSLETT | MNTISSLETTDLPAAYHIEQRAHAFPWSEKTFASNQGERYLNFQLTQNGKMAAFAITQVVLDEATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYESLGFNEATIRRNYYPTTDGREDAIIMALPISM | protein modification process cytoplasm N-acetyltransferase activity peptide-alanine-alpha-N-acetyltransferase activity peptide-lysine-N-acetyltransferase activity Escherichia coli Acyltransferase Cytoplasm Reference proteome Transferase MNTISSLETT MNTISSLETTDLPAAYHIEQRAHAFPWSEKTFASNQGERYLNFQLTQNGKMAAFAITQVVLDEATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYESLGFNEATIRRNYYPTTDGREDAIIMALPISM |
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