url stringlengths 64 66 | repository_url stringclasses 1
value | labels_url stringlengths 78 80 | comments_url stringlengths 73 75 | events_url stringlengths 71 73 | html_url stringlengths 53 56 | id int64 645M 2.96B | node_id stringlengths 18 32 | number int64 1 824 | title stringlengths 8 182 | user dict | labels listlengths 0 11 | state stringclasses 2
values | locked bool 1
class | assignee dict | assignees listlengths 0 3 | milestone dict | comments listlengths 0 21 | created_at timestamp[s]date 2012-12-06 15:26:13 2025-03-31 22:38:34 | updated_at timestamp[s]date 2020-07-09 00:33:00 2025-04-03 22:45:00 | closed_at timestamp[s]date 2020-07-02 21:30:37 2025-04-03 01:09:16 ⌀ | author_association stringclasses 4
values | type null | sub_issues_summary dict | active_lock_reason null | body stringlengths 0 5.97k ⌀ | closed_by dict | reactions dict | timeline_url stringlengths 73 75 | performed_via_github_app null | state_reason stringclasses 2
values | draft bool 2
classes | pull_request dict | is_pull_request bool 2
classes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/223 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/223/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/223/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/223/events | https://github.com/UWB-Biocomputing/Graphitti/pull/223 | 946,955,426 | MDExOlB1bGxSZXF1ZXN0NjkyMDMyMDI2 | 223 | Test documentation | {
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://api.github.com/users/jbrown725/followers",
"following_url": "https://api.github.com/users/jbrown725/following{/other_user}",
"gists_url": "https://api.github.com/users/jbrown725/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jbrown725/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jbrown725/subscriptions",
"organizations_url": "https://api.github.com/users/jbrown725/orgs",
"repos_url": "https://api.github.com/users/jbrown725/repos",
"events_url": "https://api.github.com/users/jbrown725/events{/privacy}",
"received_events_url": "https://api.github.com/users/jbrown725/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [] | 2021-07-18T05:25:04 | 2021-07-18T21:28:29 | 2021-07-18T21:28:26 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | Move internal testing and writeups to a folder in documentation. Create landing page for tests and link to it from Graphitti's landing page. | {
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://api.github.com/users/jbrown725/followers",
"following_url": "https://api.github.com/users/jbrown725/following{/other_user}",
"gists_url": "https://api.github.com/users/jbrown725/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jbrown725/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jbrown725/subscriptions",
"organizations_url": "https://api.github.com/users/jbrown725/orgs",
"repos_url": "https://api.github.com/users/jbrown725/repos",
"events_url": "https://api.github.com/users/jbrown725/events{/privacy}",
"received_events_url": "https://api.github.com/users/jbrown725/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/223/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/223/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/223",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/223",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/223.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/223.patch",
"merged_at": "2021-07-18T21:28:26"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/222 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/222/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/222/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/222/events | https://github.com/UWB-Biocomputing/Graphitti/issues/222 | 944,853,341 | MDU6SXNzdWU5NDQ4NTMzNDE= | 222 | AllSpikingSynapses::preSpikeHit causes an assertion error with test-tiny.xml | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423149,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/bug",
"name": "bug",
"color": "d73a4a",
"default": true,
"description": "Something isn't working"
}
] | closed | false | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url"... | null | [
"Well, the whole reason to have a if/then is for the test to be true sometimes, right? :^)\r\n\r\nRegarding the seed in the config files, I'm not sure it's used in the simulator. Note that there are two RNGs -- one to initialize parameters and one to generate simulator noise. It would be good to seed them from the ... | 2021-07-14T22:52:01 | 2021-07-26T18:47:54 | 2021-07-26T18:47:54 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | Line 260 evaluates to true _sometimes_
`if((delayQueue & (0x1 << idx)) != 0)`
We changed this last week.
`test-tiny.xml` provides a constant rng seed, so I'm not sure why it doesn't break (or not break) with every single run. | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/222/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/222/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/221 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/221/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/221/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/221/events | https://github.com/UWB-Biocomputing/Graphitti/pull/221 | 944,852,874 | MDExOlB1bGxSZXF1ZXN0NjkwMjcyOTI5 | 221 | Removed IAllVertices | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [] | 2021-07-14T22:50:52 | 2021-07-17T22:54:10 | 2021-07-17T22:54:00 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | All vertex classes now inherit from `AllVertices` | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/221/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/221/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/221",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/221",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/221.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/221.patch",
"merged_at": "2021-07-17T22:53:59"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/220 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/220/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/220/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/220/events | https://github.com/UWB-Biocomputing/Graphitti/issues/220 | 942,340,994 | MDU6SXNzdWU5NDIzNDA5OTQ= | 220 | Remove dynamic_casts from AllSTDPSynapses::advanceEdge | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423158,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTU4",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/good%20first%20issue",
"name": "good first issue",
"color": "7057ff",
"default": true,
"description": "Good for newcomers"
},
{
"id": 2159503249,
... | open | false | null | [] | null | [
"This sounds like an excellent mini-project for a new lab member.",
"One note: the calling method (`advanceEdges()`) is in the abstract base class and just inherited. However, `advanceEdge()` is implemented in the (concrete) subclasses. So, the question is, how to do the dynamic cast in the inherited code?"
] | 2021-07-12T18:42:43 | 2021-07-21T17:41:35 | null | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | `AllSTDPSynapses::advanceEdge` dynamic_casts an instance of `IAllVertices` to `AllSpikingNeurons`.
By doing this in `advanceEdges` and passing in an instance of `AllSpikingNeurons`, we can save many thousand casts per timestep.
I'm not sure if this is enough to create a noticeable speedup though. | null | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/220/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/220/timeline | null | null | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/219 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/219/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/219/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/219/events | https://github.com/UWB-Biocomputing/Graphitti/issues/219 | 942,337,335 | MDU6SXNzdWU5NDIzMzczMzU= | 219 | AllSTDPSynapses methods don't initialize variables | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423149,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/bug",
"name": "bug",
"color": "d73a4a",
"default": true,
"description": "Something isn't working"
}
] | closed | false | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url"... | null | [
"OK, let's go over this code at our next meeting."
] | 2021-07-12T18:37:31 | 2021-07-26T18:47:54 | 2021-07-26T18:47:54 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | `synapticWeightModification` sometimes returns `dw` after it was defined as `BGFLOAT dw;`, without assigning it a value.
I'm fairly certain that there's no way to be confident about the value of `dw`. | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/219/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/219/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/218 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/218/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/218/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/218/events | https://github.com/UWB-Biocomputing/Graphitti/issues/218 | 940,996,745 | MDU6SXNzdWU5NDA5OTY3NDU= | 218 | Check test config files for issues with NList | {
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://api.github.com/users/jbrown725/followers",
"following_url": "https://api.github.com/users/jbrown725/following{/other_user}",
"gists_url": "https://api.github.com/users/jbrown725/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jbrown725/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jbrown725/subscriptions",
"organizations_url": "https://api.github.com/users/jbrown725/orgs",
"repos_url": "https://api.github.com/users/jbrown725/repos",
"events_url": "https://api.github.com/users/jbrown725/events{/privacy}",
"received_events_url": "https://api.github.com/users/jbrown725/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2159503249,
"node_id": "MDU6TGFiZWwyMTU5NTAzMjQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/cleanup",
"name": "cleanup",
"color": "0075ca",
"default": false,
"description": ""
}
] | closed | false | {
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://api.github.com/users/jbrown725/followers",
"following_url": "https://api.github.com/users/jbrown725/following{/other_user}",
"gists_url": "https://api.github.com/users/jbrown725/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jbrown725/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jbrown725/subscriptions",
"organizations_url": "https://api.github.com/users/jbrown725/orgs",
"repos_url": "https://api.github.com/users/jbrown725/repos",
"events_url": "https://api.github.com/users/jbrown725/events{/privacy}",
"received_events_url": "https://api.github.com/users/jbrown725/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://a... | null | [] | 2021-07-09T18:56:04 | 2021-07-21T17:40:48 | 2021-07-21T17:40:48 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | The test config files need to be checked to ensure they are using the correct NList types in the LayoutFiles and RecorderParams parameters. They may all need some cleanup, but the following files are especially likely to have errors because I copied their RecorderParams from another file just so that they were not blank:
- test-large-connected.xml
- test-large-long.xml
- test-large-short.xml
- test-medium-2.xml
- test-medium-100.xml
- test-medium-500.xml | {
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://api.github.com/users/jbrown725/followers",
"following_url": "https://api.github.com/users/jbrown725/following{/other_user}",
"gists_url": "https://api.github.com/users/jbrown725/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jbrown725/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jbrown725/subscriptions",
"organizations_url": "https://api.github.com/users/jbrown725/orgs",
"repos_url": "https://api.github.com/users/jbrown725/repos",
"events_url": "https://api.github.com/users/jbrown725/events{/privacy}",
"received_events_url": "https://api.github.com/users/jbrown725/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/218/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/218/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/217 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/217/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/217/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/217/events | https://github.com/UWB-Biocomputing/Graphitti/issues/217 | 940,987,604 | MDU6SXNzdWU5NDA5ODc2MDQ= | 217 | Convert ParameterManager outputs to log4cplus | {
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://api.github.com/users/jbrown725/followers",
"following_url": "https://api.github.com/users/jbrown725/following{/other_user}",
"gists_url": "https://api.github.com/users/jbrown725/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jbrown725/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jbrown725/subscriptions",
"organizations_url": "https://api.github.com/users/jbrown725/orgs",
"repos_url": "https://api.github.com/users/jbrown725/repos",
"events_url": "https://api.github.com/users/jbrown725/events{/privacy}",
"received_events_url": "https://api.github.com/users/jbrown725/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423158,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTU4",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/good%20first%20issue",
"name": "good first issue",
"color": "7057ff",
"default": true,
"description": "Good for newcomers"
},
{
"id": 2159503249,
... | open | false | null | [] | null | [
"Should these all just be fatal? We never check for successful reads, so we always end up using uninitialized variables, which is bad.",
"Yeah true, if the parameter isn't in the config file then the simulation will probably be wrong and the simulator should exit rather than continue.",
"Related to #196. There ... | 2021-07-09T18:39:58 | 2023-09-26T05:13:47 | null | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | ParameterManager currently outputs errors using cerr. These should be converted to log4cplus outputs for consistency with the rest of the console output. | null | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/217/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/217/timeline | null | null | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/216 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/216/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/216/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/216/events | https://github.com/UWB-Biocomputing/Graphitti/issues/216 | 939,337,988 | MDU6SXNzdWU5MzkzMzc5ODg= | 216 | Generate Workbench templates automatically | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423156,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTU2",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/enhancement",
"name": "enhancement",
"color": "a2eeef",
"default": true,
"description": "New feature or request"
}
] | open | false | null | [] | null | [
"This could be analogous to the newly-added command line option that has Graphitti just output its GitHub commit ID."
] | 2021-07-07T23:31:40 | 2021-08-13T00:43:59 | null | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | I _think_ that it's possible to do this. If every part of the simulator loads its parameters from `ParameterManager`, then it should be possible to instantiate every object compiled into the system and call their `LoadParameters()` methods. If we tell `ParameterManager` to do it, we might have it generate templates from these calls, rather than generate errors. Or something like that. | null | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/216/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/216/timeline | null | null | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/215 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/215/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/215/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/215/events | https://github.com/UWB-Biocomputing/Graphitti/pull/215 | 938,259,181 | MDExOlB1bGxSZXF1ZXN0Njg0Njc3NjU3 | 215 | Array performace test | {
"login": "kyledukart",
"id": 46544456,
"node_id": "MDQ6VXNlcjQ2NTQ0NDU2",
"avatar_url": "https://avatars.githubusercontent.com/u/46544456?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/kyledukart",
"html_url": "https://github.com/kyledukart",
"followers_url": "https://api.github.com/users/kyledukart/followers",
"following_url": "https://api.github.com/users/kyledukart/following{/other_user}",
"gists_url": "https://api.github.com/users/kyledukart/gists{/gist_id}",
"starred_url": "https://api.github.com/users/kyledukart/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/kyledukart/subscriptions",
"organizations_url": "https://api.github.com/users/kyledukart/orgs",
"repos_url": "https://api.github.com/users/kyledukart/repos",
"events_url": "https://api.github.com/users/kyledukart/events{/privacy}",
"received_events_url": "https://api.github.com/users/kyledukart/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [] | 2021-07-06T21:04:49 | 2021-07-06T21:07:17 | 2021-07-06T21:07:12 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | Add array/vector/valarray efficiency testing and readme. | {
"login": "kyledukart",
"id": 46544456,
"node_id": "MDQ6VXNlcjQ2NTQ0NDU2",
"avatar_url": "https://avatars.githubusercontent.com/u/46544456?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/kyledukart",
"html_url": "https://github.com/kyledukart",
"followers_url": "https://api.github.com/users/kyledukart/followers",
"following_url": "https://api.github.com/users/kyledukart/following{/other_user}",
"gists_url": "https://api.github.com/users/kyledukart/gists{/gist_id}",
"starred_url": "https://api.github.com/users/kyledukart/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/kyledukart/subscriptions",
"organizations_url": "https://api.github.com/users/kyledukart/orgs",
"repos_url": "https://api.github.com/users/kyledukart/repos",
"events_url": "https://api.github.com/users/kyledukart/events{/privacy}",
"received_events_url": "https://api.github.com/users/kyledukart/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/215/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/215/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/215",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/215",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/215.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/215.patch",
"merged_at": "2021-07-06T21:07:12"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/214 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/214/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/214/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/214/events | https://github.com/UWB-Biocomputing/Graphitti/pull/214 | 937,331,980 | MDExOlB1bGxSZXF1ZXN0NjgzOTA1Nzk1 | 214 | add section about configuring VSC with CMake | {
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://api.github.com/users/jbrown725/followers",
"following_url": "https://api.github.com/users/jbrown725/following{/other_user}",
"gists_url": "https://api.github.com/users/jbrown725/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jbrown725/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jbrown725/subscriptions",
"organizations_url": "https://api.github.com/users/jbrown725/orgs",
"repos_url": "https://api.github.com/users/jbrown725/repos",
"events_url": "https://api.github.com/users/jbrown725/events{/privacy}",
"received_events_url": "https://api.github.com/users/jbrown725/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [
"Did a substantial update which included adding all the information suggested."
] | 2021-07-05T19:53:04 | 2021-07-10T19:57:32 | 2021-07-10T19:57:28 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | {
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://api.github.com/users/jbrown725/followers",
"following_url": "https://api.github.com/users/jbrown725/following{/other_user}",
"gists_url": "https://api.github.com/users/jbrown725/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jbrown725/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jbrown725/subscriptions",
"organizations_url": "https://api.github.com/users/jbrown725/orgs",
"repos_url": "https://api.github.com/users/jbrown725/repos",
"events_url": "https://api.github.com/users/jbrown725/events{/privacy}",
"received_events_url": "https://api.github.com/users/jbrown725/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/214/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/214/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/214",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/214",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/214.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/214.patch",
"merged_at": "2021-07-10T19:57:28"
} | true | |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/213 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/213/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/213/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/213/events | https://github.com/UWB-Biocomputing/Graphitti/issues/213 | 936,626,078 | MDU6SXNzdWU5MzY2MjYwNzg= | 213 | Test config files with static connections do not run | {
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://api.github.com/users/jbrown725/followers",
"following_url": "https://api.github.com/users/jbrown725/following{/other_user}",
"gists_url": "https://api.github.com/users/jbrown725/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jbrown725/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jbrown725/subscriptions",
"organizations_url": "https://api.github.com/users/jbrown725/orgs",
"repos_url": "https://api.github.com/users/jbrown725/repos",
"events_url": "https://api.github.com/users/jbrown725/events{/privacy}",
"received_events_url": "https://api.github.com/users/jbrown725/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423149,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/bug",
"name": "bug",
"color": "d73a4a",
"default": true,
"description": "Something isn't working"
}
] | closed | false | null | [] | null | [
"I think there's an error in the bitwise queue initialization.\r\n`AllSpikingSynapses::isSpikeQueue` near line 236:\r\n`delayQueue &= ~(0x1 << delayIdx);`\r\n\r\nIf `delayQueue` is initialized to 0, then this will do nothing.\r\n\r\nThen, in `AllSpikingSynapses::preSpikeHit` near line 260:\r\n`(delayQueue & (0x1 <<... | 2021-07-05T02:42:26 | 2021-07-05T18:21:34 | 2021-07-05T18:21:34 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | Test config files with the connection class "ConnStatic" do not run unless one or both of the `threshConnsRadius` or `connsPerNeuron` parameters are set to 0. If both are nonzero, the program either segmentation faults at line 256 of AllSpikingSynapses or outputs an error to edges.txt and quits at line 262. The error it outputs looks like `Delay Queue Error 0 idx22 iSync 0`, with the number after idx sometimes being different.
This affects the following files:
- test-medium-connected-stdp
- test-medium-stdp
- test-small-connected-stdp
- test-tiny-stdp
- test-tiny-xml-stdp | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/213/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/213/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/212 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/212/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/212/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/212/events | https://github.com/UWB-Biocomputing/Graphitti/pull/212 | 936,580,223 | MDExOlB1bGxSZXF1ZXN0NjgzMjY5NDc4 | 212 | Fix parameter manager | {
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://api.github.com/users/jbrown725/followers",
"following_url": "https://api.github.com/users/jbrown725/following{/other_user}",
"gists_url": "https://api.github.com/users/jbrown725/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jbrown725/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jbrown725/subscriptions",
"organizations_url": "https://api.github.com/users/jbrown725/orgs",
"repos_url": "https://api.github.com/users/jbrown725/repos",
"events_url": "https://api.github.com/users/jbrown725/events{/privacy}",
"received_events_url": "https://api.github.com/users/jbrown725/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [] | 2021-07-05T00:43:53 | 2021-07-09T18:18:18 | 2021-07-09T18:18:15 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | closes #208 | {
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://api.github.com/users/jbrown725/followers",
"following_url": "https://api.github.com/users/jbrown725/following{/other_user}",
"gists_url": "https://api.github.com/users/jbrown725/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jbrown725/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jbrown725/subscriptions",
"organizations_url": "https://api.github.com/users/jbrown725/orgs",
"repos_url": "https://api.github.com/users/jbrown725/repos",
"events_url": "https://api.github.com/users/jbrown725/events{/privacy}",
"received_events_url": "https://api.github.com/users/jbrown725/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/212/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/212/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/212",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/212",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/212.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/212.patch",
"merged_at": "2021-07-09T18:18:14"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/211 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/211/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/211/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/211/events | https://github.com/UWB-Biocomputing/Graphitti/issues/211 | 936,319,653 | MDU6SXNzdWU5MzYzMTk2NTM= | 211 | Remove specification of output (results) file from the command line | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423158,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTU4",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/good%20first%20issue",
"name": "good first issue",
"color": "7057ff",
"default": true,
"description": "Good for newcomers"
},
{
"id": 2159503249,
... | closed | false | {
"login": "kimjamesuw",
"id": 60371273,
"node_id": "MDQ6VXNlcjYwMzcxMjcz",
"avatar_url": "https://avatars.githubusercontent.com/u/60371273?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/kimjamesuw",
"html_url": "https://github.com/kimjamesuw",
"followers_url": "https://api.github.com/users/kimjamesuw/followers",
"following_url": "https://api.github.com/users/kimjamesuw/following{/other_user}",
"gists_url": "https://api.github.com/users/kimjamesuw/gists{/gist_id}",
"starred_url": "https://api.github.com/users/kimjamesuw/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/kimjamesuw/subscriptions",
"organizations_url": "https://api.github.com/users/kimjamesuw/orgs",
"repos_url": "https://api.github.com/users/kimjamesuw/repos",
"events_url": "https://api.github.com/users/kimjamesuw/events{/privacy}",
"received_events_url": "https://api.github.com/users/kimjamesuw/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "kimjamesuw",
"id": 60371273,
"node_id": "MDQ6VXNlcjYwMzcxMjcz",
"avatar_url": "https://avatars.githubusercontent.com/u/60371273?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/kimjamesuw",
"html_url": "https://github.com/kimjamesuw",
"followers_url": "https:... | null | [
"This should be accomplished in conjunction with having the recorder class load its parameters and moving the specification of the output file in the config file from the global simulation parameter section to the recorder class section."
] | 2021-07-03T20:07:01 | 2021-11-10T21:33:57 | 2021-11-10T21:33:57 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | This is easier to manage from Workbench if it's in the configuration file, and confusing to have it in both places. | {
"login": "kimjamesuw",
"id": 60371273,
"node_id": "MDQ6VXNlcjYwMzcxMjcz",
"avatar_url": "https://avatars.githubusercontent.com/u/60371273?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/kimjamesuw",
"html_url": "https://github.com/kimjamesuw",
"followers_url": "https://api.github.com/users/kimjamesuw/followers",
"following_url": "https://api.github.com/users/kimjamesuw/following{/other_user}",
"gists_url": "https://api.github.com/users/kimjamesuw/gists{/gist_id}",
"starred_url": "https://api.github.com/users/kimjamesuw/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/kimjamesuw/subscriptions",
"organizations_url": "https://api.github.com/users/kimjamesuw/orgs",
"repos_url": "https://api.github.com/users/kimjamesuw/repos",
"events_url": "https://api.github.com/users/kimjamesuw/events{/privacy}",
"received_events_url": "https://api.github.com/users/kimjamesuw/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/211/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/211/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/210 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/210/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/210/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/210/events | https://github.com/UWB-Biocomputing/Graphitti/issues/210 | 932,145,762 | MDU6SXNzdWU5MzIxNDU3NjI= | 210 | BrainGrid docs not included in Graphitti docs | {
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://api.github.com/users/jbrown725/followers",
"following_url": "https://api.github.com/users/jbrown725/following{/other_user}",
"gists_url": "https://api.github.com/users/jbrown725/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jbrown725/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jbrown725/subscriptions",
"organizations_url": "https://api.github.com/users/jbrown725/orgs",
"repos_url": "https://api.github.com/users/jbrown725/repos",
"events_url": "https://api.github.com/users/jbrown725/events{/privacy}",
"received_events_url": "https://api.github.com/users/jbrown725/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423152,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTUy",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/documentation",
"name": "documentation",
"color": "0075ca",
"default": true,
"description": "Improvements or additions to documentation"
}
] | closed | false | {
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://api.github.com/users/jbrown725/followers",
"following_url": "https://api.github.com/users/jbrown725/following{/other_user}",
"gists_url": "https://api.github.com/users/jbrown725/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jbrown725/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jbrown725/subscriptions",
"organizations_url": "https://api.github.com/users/jbrown725/orgs",
"repos_url": "https://api.github.com/users/jbrown725/repos",
"events_url": "https://api.github.com/users/jbrown725/events{/privacy}",
"received_events_url": "https://api.github.com/users/jbrown725/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://a... | null | [] | 2021-06-29T02:28:16 | 2021-08-05T01:43:50 | 2021-08-05T01:43:50 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | BrainGrid's documentation has a section 5 titled Implementation which never made its way to Graphitti's docs:
https://github.com/UWB-Biocomputing/BrainGrid/blob/master/docs/braingrid_implementation.md
If it is relevant to Graphitti, it should be added to Graphitti's documentation with whatever changes necessary. | {
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://api.github.com/users/jbrown725/followers",
"following_url": "https://api.github.com/users/jbrown725/following{/other_user}",
"gists_url": "https://api.github.com/users/jbrown725/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jbrown725/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jbrown725/subscriptions",
"organizations_url": "https://api.github.com/users/jbrown725/orgs",
"repos_url": "https://api.github.com/users/jbrown725/repos",
"events_url": "https://api.github.com/users/jbrown725/events{/privacy}",
"received_events_url": "https://api.github.com/users/jbrown725/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/210/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/210/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/209 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/209/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/209/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/209/events | https://github.com/UWB-Biocomputing/Graphitti/pull/209 | 930,836,973 | MDExOlB1bGxSZXF1ZXN0Njc4NDQ2NDE1 | 209 | Update github pages docs | {
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://api.github.com/users/jbrown725/followers",
"following_url": "https://api.github.com/users/jbrown725/following{/other_user}",
"gists_url": "https://api.github.com/users/jbrown725/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jbrown725/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jbrown725/subscriptions",
"organizations_url": "https://api.github.com/users/jbrown725/orgs",
"repos_url": "https://api.github.com/users/jbrown725/repos",
"events_url": "https://api.github.com/users/jbrown725/events{/privacy}",
"received_events_url": "https://api.github.com/users/jbrown725/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | {
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://api.github.com/users/jbrown725/followers",
"following_url": "https://api.github.com/users/jbrown725/following{/other_user}",
"gists_url": "https://api.github.com/users/jbrown725/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jbrown725/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jbrown725/subscriptions",
"organizations_url": "https://api.github.com/users/jbrown725/orgs",
"repos_url": "https://api.github.com/users/jbrown725/repos",
"events_url": "https://api.github.com/users/jbrown725/events{/privacy}",
"received_events_url": "https://api.github.com/users/jbrown725/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://a... | null | [] | 2021-06-27T03:04:04 | 2021-07-03T18:44:34 | 2021-07-03T18:44:34 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | {
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://api.github.com/users/jbrown725/followers",
"following_url": "https://api.github.com/users/jbrown725/following{/other_user}",
"gists_url": "https://api.github.com/users/jbrown725/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jbrown725/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jbrown725/subscriptions",
"organizations_url": "https://api.github.com/users/jbrown725/orgs",
"repos_url": "https://api.github.com/users/jbrown725/repos",
"events_url": "https://api.github.com/users/jbrown725/events{/privacy}",
"received_events_url": "https://api.github.com/users/jbrown725/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/209/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/209/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/209",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/209",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/209.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/209.patch",
"merged_at": "2021-07-03T18:44:34"
} | true | |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/208 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/208/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/208/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/208/events | https://github.com/UWB-Biocomputing/Graphitti/issues/208 | 929,512,352 | MDU6SXNzdWU5Mjk1MTIzNTI= | 208 | ParameterManager error messages produced during at least some simulator runs | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423149,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/bug",
"name": "bug",
"color": "d73a4a",
"default": true,
"description": "Something isn't working"
}
] | closed | false | {
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://api.github.com/users/jbrown725/followers",
"following_url": "https://api.github.com/users/jbrown725/following{/other_user}",
"gists_url": "https://api.github.com/users/jbrown725/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jbrown725/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jbrown725/subscriptions",
"organizations_url": "https://api.github.com/users/jbrown725/orgs",
"repos_url": "https://api.github.com/users/jbrown725/repos",
"events_url": "https://api.github.com/users/jbrown725/events{/privacy}",
"received_events_url": "https://api.github.com/users/jbrown725/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://a... | null | [
"I think this is a case where the config files need to be updated, or where they were typoed during an untested update.",
"Snigdha's code implemented `AllSpikingSynapses::loadParameters`, which asks for these floats. None of them are defined in any of the old config files:\r\n\r\n```\r\n//tau/ii/text()\r\n//tau/i... | 2021-06-24T18:43:48 | 2021-07-09T18:18:15 | 2021-07-09T18:18:15 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | We get the following error messages when running `test-tiny.xml` and `test-small.xml`. Might be true for other config files:
```
Parsed parameter could not be parsed as a float. Value:
Parsed parameter could not be parsed as a float. Value:
Parsed parameter could not be parsed as a float. Value:
Parsed parameter could not be parsed as a float. Value:
Parsed parameter could not be parsed as a float. Value:
Parsed parameter could not be parsed as a float. Value:
Parsed parameter could not be parsed as a float. Value:
Parsed parameter could not be parsed as a float. Value:
```
| {
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://api.github.com/users/jbrown725/followers",
"following_url": "https://api.github.com/users/jbrown725/following{/other_user}",
"gists_url": "https://api.github.com/users/jbrown725/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jbrown725/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jbrown725/subscriptions",
"organizations_url": "https://api.github.com/users/jbrown725/orgs",
"repos_url": "https://api.github.com/users/jbrown725/repos",
"events_url": "https://api.github.com/users/jbrown725/events{/privacy}",
"received_events_url": "https://api.github.com/users/jbrown725/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/208/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/208/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/207 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/207/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/207/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/207/events | https://github.com/UWB-Biocomputing/Graphitti/issues/207 | 929,458,834 | MDU6SXNzdWU5Mjk0NTg4MzQ= | 207 | Doxygen documentation still needs some work | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423149,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/bug",
"name": "bug",
"color": "d73a4a",
"default": true,
"description": "Something isn't working"
},
{
"id": 2144423152,
"node_id": "MDU6TGFiZWwyM... | open | false | null | [] | null | [] | 2021-06-24T17:37:24 | 2025-01-22T19:01:41 | null | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | * Links from Graphitti landing page not all working.
* Seems that it's missing a top-level page.
* Links to source code don't work.
* Seems that not all of the information in the comment at top of class .h file is getting into doxygen class description. | null | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/207/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/207/timeline | null | null | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/206 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/206/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/206/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/206/events | https://github.com/UWB-Biocomputing/Graphitti/issues/206 | 928,781,669 | MDU6SXNzdWU5Mjg3ODE2Njk= | 206 | Look into NVIDIA CUB for GPU code | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423156,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTU2",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/enhancement",
"name": "enhancement",
"color": "a2eeef",
"default": true,
"description": "New feature or request"
},
{
"id": 2144423165,
"node_id":... | open | false | null | [] | null | [] | 2021-06-24T02:14:47 | 2021-10-19T19:49:17 | null | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | See https://nvlabs.github.io/cub/ | null | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/206/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/206/timeline | null | null | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/205 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/205/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/205/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/205/events | https://github.com/UWB-Biocomputing/Graphitti/issues/205 | 922,852,674 | MDU6SXNzdWU5MjI4NTI2NzQ= | 205 | figure out how to track deleted events | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423165,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTY1",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/question",
"name": "question",
"color": "d876e3",
"default": true,
"description": "Further information is requested"
},
{
"id": 3092239149,
"node_... | open | false | null | [] | null | [] | 2021-06-16T16:51:56 | 2022-01-21T20:51:06 | null | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | after update connections, deleted events need to be rerouted in some scenarios. find a best way to do this. | null | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/205/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/205/timeline | null | null | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/204 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/204/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/204/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/204/events | https://github.com/UWB-Biocomputing/Graphitti/pull/204 | 904,364,345 | MDExOlB1bGxSZXF1ZXN0NjU1NTIyMTAz | 204 | updated doxyfile, regenerated documentation | {
"login": "kyledukart",
"id": 46544456,
"node_id": "MDQ6VXNlcjQ2NTQ0NDU2",
"avatar_url": "https://avatars.githubusercontent.com/u/46544456?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/kyledukart",
"html_url": "https://github.com/kyledukart",
"followers_url": "https://api.github.com/users/kyledukart/followers",
"following_url": "https://api.github.com/users/kyledukart/following{/other_user}",
"gists_url": "https://api.github.com/users/kyledukart/gists{/gist_id}",
"starred_url": "https://api.github.com/users/kyledukart/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/kyledukart/subscriptions",
"organizations_url": "https://api.github.com/users/kyledukart/orgs",
"repos_url": "https://api.github.com/users/kyledukart/repos",
"events_url": "https://api.github.com/users/kyledukart/events{/privacy}",
"received_events_url": "https://api.github.com/users/kyledukart/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | {
"login": "kyledukart",
"id": 46544456,
"node_id": "MDQ6VXNlcjQ2NTQ0NDU2",
"avatar_url": "https://avatars.githubusercontent.com/u/46544456?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/kyledukart",
"html_url": "https://github.com/kyledukart",
"followers_url": "https://api.github.com/users/kyledukart/followers",
"following_url": "https://api.github.com/users/kyledukart/following{/other_user}",
"gists_url": "https://api.github.com/users/kyledukart/gists{/gist_id}",
"starred_url": "https://api.github.com/users/kyledukart/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/kyledukart/subscriptions",
"organizations_url": "https://api.github.com/users/kyledukart/orgs",
"repos_url": "https://api.github.com/users/kyledukart/repos",
"events_url": "https://api.github.com/users/kyledukart/events{/privacy}",
"received_events_url": "https://api.github.com/users/kyledukart/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "kyledukart",
"id": 46544456,
"node_id": "MDQ6VXNlcjQ2NTQ0NDU2",
"avatar_url": "https://avatars.githubusercontent.com/u/46544456?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/kyledukart",
"html_url": "https://github.com/kyledukart",
"followers_url": "https:... | null | [] | 2021-05-27T23:18:26 | 2021-07-06T19:26:34 | 2021-05-27T23:25:19 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | Documentation is working as intended on my local machine. I believe this should fix the issue. | {
"login": "kyledukart",
"id": 46544456,
"node_id": "MDQ6VXNlcjQ2NTQ0NDU2",
"avatar_url": "https://avatars.githubusercontent.com/u/46544456?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/kyledukart",
"html_url": "https://github.com/kyledukart",
"followers_url": "https://api.github.com/users/kyledukart/followers",
"following_url": "https://api.github.com/users/kyledukart/following{/other_user}",
"gists_url": "https://api.github.com/users/kyledukart/gists{/gist_id}",
"starred_url": "https://api.github.com/users/kyledukart/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/kyledukart/subscriptions",
"organizations_url": "https://api.github.com/users/kyledukart/orgs",
"repos_url": "https://api.github.com/users/kyledukart/repos",
"events_url": "https://api.github.com/users/kyledukart/events{/privacy}",
"received_events_url": "https://api.github.com/users/kyledukart/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/204/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/204/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/204",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/204",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/204.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/204.patch",
"merged_at": "2021-05-27T23:25:19"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/203 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/203/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/203/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/203/events | https://github.com/UWB-Biocomputing/Graphitti/pull/203 | 900,031,887 | MDExOlB1bGxSZXF1ZXN0NjUxNjQ3MzI0 | 203 | Doxygen update | {
"login": "kyledukart",
"id": 46544456,
"node_id": "MDQ6VXNlcjQ2NTQ0NDU2",
"avatar_url": "https://avatars.githubusercontent.com/u/46544456?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/kyledukart",
"html_url": "https://github.com/kyledukart",
"followers_url": "https://api.github.com/users/kyledukart/followers",
"following_url": "https://api.github.com/users/kyledukart/following{/other_user}",
"gists_url": "https://api.github.com/users/kyledukart/gists{/gist_id}",
"starred_url": "https://api.github.com/users/kyledukart/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/kyledukart/subscriptions",
"organizations_url": "https://api.github.com/users/kyledukart/orgs",
"repos_url": "https://api.github.com/users/kyledukart/repos",
"events_url": "https://api.github.com/users/kyledukart/events{/privacy}",
"received_events_url": "https://api.github.com/users/kyledukart/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | {
"login": "kyledukart",
"id": 46544456,
"node_id": "MDQ6VXNlcjQ2NTQ0NDU2",
"avatar_url": "https://avatars.githubusercontent.com/u/46544456?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/kyledukart",
"html_url": "https://github.com/kyledukart",
"followers_url": "https://api.github.com/users/kyledukart/followers",
"following_url": "https://api.github.com/users/kyledukart/following{/other_user}",
"gists_url": "https://api.github.com/users/kyledukart/gists{/gist_id}",
"starred_url": "https://api.github.com/users/kyledukart/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/kyledukart/subscriptions",
"organizations_url": "https://api.github.com/users/kyledukart/orgs",
"repos_url": "https://api.github.com/users/kyledukart/repos",
"events_url": "https://api.github.com/users/kyledukart/events{/privacy}",
"received_events_url": "https://api.github.com/users/kyledukart/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "kyledukart",
"id": 46544456,
"node_id": "MDQ6VXNlcjQ2NTQ0NDU2",
"avatar_url": "https://avatars.githubusercontent.com/u/46544456?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/kyledukart",
"html_url": "https://github.com/kyledukart",
"followers_url": "https:... | null | [] | 2021-05-24T21:33:22 | 2021-05-25T17:17:43 | 2021-05-25T17:17:40 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | Updated Doxyfile
Created readme for updating documentation
Updated documentation | {
"login": "kyledukart",
"id": 46544456,
"node_id": "MDQ6VXNlcjQ2NTQ0NDU2",
"avatar_url": "https://avatars.githubusercontent.com/u/46544456?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/kyledukart",
"html_url": "https://github.com/kyledukart",
"followers_url": "https://api.github.com/users/kyledukart/followers",
"following_url": "https://api.github.com/users/kyledukart/following{/other_user}",
"gists_url": "https://api.github.com/users/kyledukart/gists{/gist_id}",
"starred_url": "https://api.github.com/users/kyledukart/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/kyledukart/subscriptions",
"organizations_url": "https://api.github.com/users/kyledukart/orgs",
"repos_url": "https://api.github.com/users/kyledukart/repos",
"events_url": "https://api.github.com/users/kyledukart/events{/privacy}",
"received_events_url": "https://api.github.com/users/kyledukart/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/203/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/203/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/203",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/203",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/203.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/203.patch",
"merged_at": "2021-05-25T17:17:40"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/202 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/202/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/202/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/202/events | https://github.com/UWB-Biocomputing/Graphitti/pull/202 | 895,612,323 | MDExOlB1bGxSZXF1ZXN0NjQ3ODEyOTkw | 202 | EdgeIndexMap Fix | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [
"I don't have a problem with this, but right now the simulator isn't working. I would prefer that we hold off on any additional tweaks/modifications to the simulator until we have it completely operational."
] | 2021-05-19T15:51:50 | 2021-07-14T15:43:19 | 2021-07-14T03:40:40 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | Proposed fix for EdgeIndexMap creation, addresses issues #188, #199
Does not switch to `valarrays` or `vectors`, that can be done independently later.
Allocates some more memory than it used to, but shouldn't affect how it works.
It used to allocate the minimum required space, now allocates space for `numVertices * maxEdgesPerVertex` edges. | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/202/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/202/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/202",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/202",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/202.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/202.patch",
"merged_at": "2021-07-14T03:40:39"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/201 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/201/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/201/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/201/events | https://github.com/UWB-Biocomputing/Graphitti/issues/201 | 894,750,380 | MDU6SXNzdWU4OTQ3NTAzODA= | 201 | GPU build encounters linking error | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423149,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/bug",
"name": "bug",
"color": "d73a4a",
"default": true,
"description": "Something isn't working"
},
{
"id": 2159406989,
"node_id": "MDU6TGFiZWwyM... | closed | false | null | [] | null | [
"Yes, the GPU build is currently a mess. Let's get the CPU version completely working and validated first, and then we will tackle the GPU version step by step."
] | 2021-05-18T20:24:12 | 2021-07-14T03:40:40 | 2021-07-14T03:40:40 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | `AllSTDPSynapses::synapticWeightModification` is within a `!defined(USE_GPU)` block in AllSTDPSynapses.cpp.
I'm unsure about whether its declaration should be in such a block too, or if the definition should be outside this block. | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/201/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/201/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/200 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/200/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/200/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/200/events | https://github.com/UWB-Biocomputing/Graphitti/issues/200 | 892,777,683 | MDU6SXNzdWU4OTI3Nzc2ODM= | 200 | Code in AllSTDPSynapses::stdpLearning() seems redundant | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2159503249,
"node_id": "MDU6TGFiZWwyMTU5NTAzMjQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/cleanup",
"name": "cleanup",
"color": "0075ca",
"default": false,
"description": ""
}
] | closed | false | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url"... | null | [
"For that matter, I don't think `modDelta` is used; should consult with @sky1204 on this. Same goes for `AllSTDPSynapses::synapticWeightModification()`",
"I included it because some STDP implementations use modDelta. I did not get to use those but if someone wants to implement them in the future, it will be easie... | 2021-05-16T22:55:19 | 2021-07-26T18:47:54 | 2021-07-26T18:47:53 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | In particular:
```C++
if (delta < -STDPgap) {
// depression
dw = synapticWeightModification(iEdg, W, delta);// normalize
} else if (delta > STDPgap) {
// potentiation
dw = synapticWeightModification(iEdg, W, delta); // normalize
}
else {
return;
}
``` | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/200/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/200/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/199 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/199/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/199/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/199/events | https://github.com/UWB-Biocomputing/Graphitti/issues/199 | 892,760,121 | MDU6SXNzdWU4OTI3NjAxMjE= | 199 | Why does AllEdges::createEdgeIndexMap() have dynamically allocated arrays of vectors? | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2159503249,
"node_id": "MDU6TGFiZWwyMTU5NTAzMjQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/cleanup",
"name": "cleanup",
"color": "0075ca",
"default": false,
"description": ""
}
] | closed | false | null | [] | null | [
"And, for that matter, which is `EdgeIndexMap` dynamically allocated?",
"Same as #188 "
] | 2021-05-16T21:08:31 | 2021-07-14T03:40:40 | 2021-07-14T03:40:40 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/199/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/199/timeline | null | completed | null | null | false | |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/198 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/198/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/198/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/198/events | https://github.com/UWB-Biocomputing/Graphitti/issues/198 | 892,737,277 | MDU6SXNzdWU4OTI3MzcyNzc= | 198 | Unnecessary overridden methods in Edge class hierarchy | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2159503249,
"node_id": "MDU6TGFiZWwyMTU5NTAzMjQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/cleanup",
"name": "cleanup",
"color": "0075ca",
"default": false,
"description": ""
}
] | closed | false | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url"... | null | [
"Moreover, there are methods that are overridden that aren't labeled that way (such as `AllSpikingSynapses::resetEdge()`).",
"Maybe `AllSTDPSynapses::initSpikeQueue()`",
"Maybe `AllSTDPSynapses::isSpikeQueuePost()` and `AllSTDPSynapses::postSpikeHit()`.",
"I think that `AllSTDPSynapses::initSpikeQueue()` does... | 2021-05-16T19:05:49 | 2021-07-26T18:47:53 | 2021-07-26T18:47:53 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | I believe there are overrides in subclasses (for example, `AllNeuroEdges::AllNeuroEdges(const int numVertices, const int maxEdges)`) that are identical to the superclass method and therefore don't need to be there. | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/198/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/198/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/197 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/197/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/197/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/197/events | https://github.com/UWB-Biocomputing/Graphitti/issues/197 | 891,357,146 | MDU6SXNzdWU4OTEzNTcxNDY= | 197 | Figure out a way to move GPU methods in Model classes into GPU model subclasses only | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2159406989,
"node_id": "MDU6TGFiZWwyMTU5NDA2OTg5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/GPU",
"name": "GPU",
"color": "009800",
"default": false,
"description": ""
},
{
"id": 2159503249,
"node_id": "MDU6TGFiZWwyMTU5NTAzMjQ5",
"url... | open | false | {
"login": "BenYang2002",
"id": 96927991,
"node_id": "U_kgDOBccA9w",
"avatar_url": "https://avatars.githubusercontent.com/u/96927991?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/BenYang2002",
"html_url": "https://github.com/BenYang2002",
"followers_url": "https://api.github.com/users/BenYang2002/followers",
"following_url": "https://api.github.com/users/BenYang2002/following{/other_user}",
"gists_url": "https://api.github.com/users/BenYang2002/gists{/gist_id}",
"starred_url": "https://api.github.com/users/BenYang2002/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/BenYang2002/subscriptions",
"organizations_url": "https://api.github.com/users/BenYang2002/orgs",
"repos_url": "https://api.github.com/users/BenYang2002/repos",
"events_url": "https://api.github.com/users/BenYang2002/events{/privacy}",
"received_events_url": "https://api.github.com/users/BenYang2002/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "BenYang2002",
"id": 96927991,
"node_id": "U_kgDOBccA9w",
"avatar_url": "https://avatars.githubusercontent.com/u/96927991?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/BenYang2002",
"html_url": "https://github.com/BenYang2002",
"followers_url": "https://api... | null | [] | 2021-05-13T20:41:49 | 2025-01-25T01:01:06 | null | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | Right now, `copyGPUtoCPU()` and `copyCPUtoGPU()` are declared in `Model`, even though they are GPU-specific. Would be better if they were in `GPUModel`. | null | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/197/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/197/timeline | null | null | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/196 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/196/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/196/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/196/events | https://github.com/UWB-Biocomputing/Graphitti/issues/196 | 891,345,585 | MDU6SXNzdWU4OTEzNDU1ODU= | 196 | Chase down all cout/cerr output and convert to using loggers | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423158,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTU4",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/good%20first%20issue",
"name": "good first issue",
"color": "7057ff",
"default": true,
"description": "Good for newcomers"
},
{
"id": 2159503249,
... | open | false | null | [] | null | [
"I'd be happy to take this on for a first issue. Looks like a good way to dip my toes in."
] | 2021-05-13T20:25:22 | 2025-01-22T19:02:35 | null | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | null | null | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/196/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/196/timeline | null | null | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/195 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/195/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/195/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/195/events | https://github.com/UWB-Biocomputing/Graphitti/issues/195 | 891,339,079 | MDU6SXNzdWU4OTEzMzkwNzk= | 195 | Make sure that log files are cleared in the classes that own the loggers | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423149,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/bug",
"name": "bug",
"color": "d73a4a",
"default": true,
"description": "Something isn't working"
},
{
"id": 2144423158,
"node_id": "MDU6TGFiZWwyM... | open | false | null | [] | null | [] | 2021-05-13T20:15:24 | 2021-06-21T21:06:34 | null | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | Right now, Driver.cpp has:
```C++
fstream("../Output/Debug/logging.txt", ios::out | ios::trunc);
fstream("../Output/Debug/vertices.txt", ios::out | ios::trunc);
fstream("../Output/Debug/edges.txt", ios::out | ios::trunc);
```
Presumably, these should appear in the classes that actually declare the corresponding logger objects, not in driver. | null | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/195/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/195/timeline | null | null | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/194 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/194/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/194/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/194/events | https://github.com/UWB-Biocomputing/Graphitti/issues/194 | 889,094,234 | MDU6SXNzdWU4ODkwOTQyMzQ= | 194 | Are the XmlSTDPRecorder::toXML() methods needed? | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2159503249,
"node_id": "MDU6TGFiZWwyMTU5NTAzMjQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/cleanup",
"name": "cleanup",
"color": "0075ca",
"default": false,
"description": ""
},
{
"id": 3753459431,
"node_id": "LA_kwDOEEdqD87fuT7n",
"... | closed | false | null | [] | null | [
"Seems like these are in the Matrix classes.",
"These are probably there because `weightsHistory_`, `sourceNeuronIndexHistory_`, and `destNeuronIndexHistory_` are not Matrix but vector type. The methods are exact copies for different types, so there should be just one template method and in that sense, it does s... | 2021-05-11T23:21:22 | 2025-01-22T19:06:00 | 2025-01-22T19:05:58 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | If they are, then don't seem to be in the right class. | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/194/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/194/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/193 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/193/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/193/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/193/events | https://github.com/UWB-Biocomputing/Graphitti/issues/193 | 888,921,724 | MDU6SXNzdWU4ODg5MjE3MjQ= | 193 | STDP simulations (or at least XmlSTDPRecorder class) assumes use of ConnStatic | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2159503249,
"node_id": "MDU6TGFiZWwyMTU5NTAzMjQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/cleanup",
"name": "cleanup",
"color": "0075ca",
"default": false,
"description": ""
}
] | open | false | null | [] | null | [] | 2021-05-11T22:27:59 | 2025-01-30T00:49:40 | null | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | At the very least, there should be a check against a simulation misconfiguration. Not clear what the error condition right now would be. | null | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/193/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/193/timeline | null | null | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/192 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/192/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/192/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/192/events | https://github.com/UWB-Biocomputing/Graphitti/issues/192 | 888,027,185 | MDU6SXNzdWU4ODgwMjcxODU= | 192 | XMLSTDPRecorder class: may need to change types of member variables | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2159503249,
"node_id": "MDU6TGFiZWwyMTU5NTAzMjQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/cleanup",
"name": "cleanup",
"color": "0075ca",
"default": false,
"description": ""
},
{
"id": 3753459431,
"node_id": "LA_kwDOEEdqD87fuT7n",
"... | closed | false | null | [] | null | [
"This has been obsoleted by the Recorder class re-engineering."
] | 2021-05-11T17:50:43 | 2024-12-18T21:59:42 | 2024-12-18T21:59:42 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | After we decide how we are replacing dynamically allocated arrays. | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/192/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/192/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/191 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/191/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/191/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/191/events | https://github.com/UWB-Biocomputing/Graphitti/issues/191 | 881,458,146 | MDU6SXNzdWU4ODE0NTgxNDY= | 191 | Recorder directories need to be created | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423158,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTU4",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/good%20first%20issue",
"name": "good first issue",
"color": "7057ff",
"default": true,
"description": "Good for newcomers"
},
{
"id": 2159503249,
... | closed | false | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url"... | null | [] | 2021-05-08T23:28:05 | 2021-07-17T22:53:59 | 2021-07-17T22:53:59 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | create Neuro and NG911 directories for recorders | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/191/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/191/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/190 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/190/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/190/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/190/events | https://github.com/UWB-Biocomputing/Graphitti/issues/190 | 879,513,282 | MDU6SXNzdWU4Nzk1MTMyODI= | 190 | Move summation map from generic vertex-related class to a neuron vertex-related class | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2159503249,
"node_id": "MDU6TGFiZWwyMTU5NTAzMjQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/cleanup",
"name": "cleanup",
"color": "0075ca",
"default": false,
"description": ""
}
] | closed | false | {
"login": "jardiamj",
"id": 1088732,
"node_id": "MDQ6VXNlcjEwODg3MzI=",
"avatar_url": "https://avatars.githubusercontent.com/u/1088732?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jardiamj",
"html_url": "https://github.com/jardiamj",
"followers_url": "https://api.github.com/users/jardiamj/followers",
"following_url": "https://api.github.com/users/jardiamj/following{/other_user}",
"gists_url": "https://api.github.com/users/jardiamj/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jardiamj/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jardiamj/subscriptions",
"organizations_url": "https://api.github.com/users/jardiamj/orgs",
"repos_url": "https://api.github.com/users/jardiamj/repos",
"events_url": "https://api.github.com/users/jardiamj/events{/privacy}",
"received_events_url": "https://api.github.com/users/jardiamj/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "jardiamj",
"id": 1088732,
"node_id": "MDQ6VXNlcjEwODg3MzI=",
"avatar_url": "https://avatars.githubusercontent.com/u/1088732?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jardiamj",
"html_url": "https://github.com/jardiamj",
"followers_url": "https://api.gi... | null | [
"I think there can be a generic version of this: an \"input combiner\". This will allow for uniformity in the vertex interface and is likely necessary for any domain for GPU implementation.",
"Closing this issue as it is addressed in the PR #789"
] | 2021-05-07T18:36:07 | 2025-03-01T00:10:16 | 2025-03-01T00:10:16 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | null | {
"login": "d-kamath",
"id": 53545471,
"node_id": "MDQ6VXNlcjUzNTQ1NDcx",
"avatar_url": "https://avatars.githubusercontent.com/u/53545471?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/d-kamath",
"html_url": "https://github.com/d-kamath",
"followers_url": "https://api.github.com/users/d-kamath/followers",
"following_url": "https://api.github.com/users/d-kamath/following{/other_user}",
"gists_url": "https://api.github.com/users/d-kamath/gists{/gist_id}",
"starred_url": "https://api.github.com/users/d-kamath/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/d-kamath/subscriptions",
"organizations_url": "https://api.github.com/users/d-kamath/orgs",
"repos_url": "https://api.github.com/users/d-kamath/repos",
"events_url": "https://api.github.com/users/d-kamath/events{/privacy}",
"received_events_url": "https://api.github.com/users/d-kamath/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/190/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/190/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/189 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/189/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/189/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/189/events | https://github.com/UWB-Biocomputing/Graphitti/issues/189 | 879,488,634 | MDU6SXNzdWU4Nzk0ODg2MzQ= | 189 | Audit everywhere that a get() method is used | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423149,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/bug",
"name": "bug",
"color": "d73a4a",
"default": true,
"description": "Something isn't working"
},
{
"id": 2159503249,
"node_id": "MDU6TGFiZWwyM... | closed | false | {
"login": "d-kamath",
"id": 53545471,
"node_id": "MDQ6VXNlcjUzNTQ1NDcx",
"avatar_url": "https://avatars.githubusercontent.com/u/53545471?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/d-kamath",
"html_url": "https://github.com/d-kamath",
"followers_url": "https://api.github.com/users/d-kamath/followers",
"following_url": "https://api.github.com/users/d-kamath/following{/other_user}",
"gists_url": "https://api.github.com/users/d-kamath/gists{/gist_id}",
"starred_url": "https://api.github.com/users/d-kamath/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/d-kamath/subscriptions",
"organizations_url": "https://api.github.com/users/d-kamath/orgs",
"repos_url": "https://api.github.com/users/d-kamath/repos",
"events_url": "https://api.github.com/users/d-kamath/events{/privacy}",
"received_events_url": "https://api.github.com/users/d-kamath/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "d-kamath",
"id": 53545471,
"node_id": "MDQ6VXNlcjUzNTQ1NDcx",
"avatar_url": "https://avatars.githubusercontent.com/u/53545471?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/d-kamath",
"html_url": "https://github.com/d-kamath",
"followers_url": "https://api.... | null | [
"Based on issue #76, we've switched from using raw pointers and `shared_ptr` to utilizing `unique_ptrs`. Furthermore, as per issue #423, we've adjusted accessor methods to return references instead of pointers, effectively addressing our concerns about passing raw internal pointers from smart pointers and avoiding ... | 2021-05-07T18:21:20 | 2023-08-15T21:10:06 | 2023-08-15T21:10:06 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | We should not be getting the raw internal pointer from a smart pointer, and certainly not retain it. The only exceptions:
- When a raw pointer is needed to copy a block of memory to/from the GPU.
- For now, for serialization/deserialization, though probably that code could be cleaned up because it might support smart pointers better than raw pointers.
- Basically, only use raw pointers as local variables | {
"login": "d-kamath",
"id": 53545471,
"node_id": "MDQ6VXNlcjUzNTQ1NDcx",
"avatar_url": "https://avatars.githubusercontent.com/u/53545471?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/d-kamath",
"html_url": "https://github.com/d-kamath",
"followers_url": "https://api.github.com/users/d-kamath/followers",
"following_url": "https://api.github.com/users/d-kamath/following{/other_user}",
"gists_url": "https://api.github.com/users/d-kamath/gists{/gist_id}",
"starred_url": "https://api.github.com/users/d-kamath/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/d-kamath/subscriptions",
"organizations_url": "https://api.github.com/users/d-kamath/orgs",
"repos_url": "https://api.github.com/users/d-kamath/repos",
"events_url": "https://api.github.com/users/d-kamath/events{/privacy}",
"received_events_url": "https://api.github.com/users/d-kamath/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/189/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/189/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/188 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/188/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/188/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/188/events | https://github.com/UWB-Biocomputing/Graphitti/issues/188 | 877,802,741 | MDU6SXNzdWU4Nzc4MDI3NDE= | 188 | Fix synapseIndexMap_ creation and deletion | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2159503249,
"node_id": "MDU6TGFiZWwyMTU5NTAzMjQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/cleanup",
"name": "cleanup",
"color": "0075ca",
"default": false,
"description": ""
}
] | closed | false | null | [] | null | [
"The size of the map is changed every time. `createEdgeIndexMap()` counts the total number of edges and only allocates that much data. So, if the number of edges grows, the memory allocated to the object is greater.\r\n\r\nAlso, `vector<BGSIZE> *rgEdgeEdgeIndexMap` in `AllEdges::createEdgeIndexMap()` shouldn't be d... | 2021-05-06T17:57:36 | 2021-07-14T03:40:40 | 2021-07-14T03:40:40 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | An `EdgeIndexMap` object is created and assigned to `Connections::synapseIndexMap_` at the end of every epoch and at the start of the simulation. ~~At the moment, this causes a memory leak between epochs.~~[shared_ptr destroys it when it's no longer used] It should be created in `Connections::setupConnections` and overwritten by `createEdgeIndexMap()` with each call.
~~The size of the map doesn't change~~, and `incomingEdgeCount_` keeps track of the indices used anyway.
~~Destroy `synapseIndexMap_` in the Connections destructor.~~ [shared_ptr destroys it when it's no longer used] | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/188/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/188/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/187 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/187/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/187/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/187/events | https://github.com/UWB-Biocomputing/Graphitti/issues/187 | 876,851,482 | MDU6SXNzdWU4NzY4NTE0ODI= | 187 | log4cplus SynapsesAppender changed to EdgeAppender | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423149,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/bug",
"name": "bug",
"color": "d73a4a",
"default": true,
"description": "Something isn't working"
},
{
"id": 2144423158,
"node_id": "MDU6TGFiZWwyM... | closed | false | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
... | null | [] | 2021-05-05T21:22:59 | 2021-07-25T16:46:14 | 2021-07-25T16:46:14 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | Change the keyword of SynapseAppender to the ```EdgeAppender``` keyword in the logger instantiation. | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/187/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/187/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/186 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/186/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/186/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/186/events | https://github.com/UWB-Biocomputing/Graphitti/issues/186 | 873,480,029 | MDU6SXNzdWU4NzM0ODAwMjk= | 186 | fix zone hardcoding | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2911226130,
"node_id": "MDU6TGFiZWwyOTExMjI2MTMw",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/refactor",
"name": "refactor",
"color": "d4c5f9",
"default": false,
"description": "doesn't change functionality, just improves code"
},
{
"id": 30922... | closed | false | {
"login": "jardiamj",
"id": 1088732,
"node_id": "MDQ6VXNlcjEwODg3MzI=",
"avatar_url": "https://avatars.githubusercontent.com/u/1088732?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jardiamj",
"html_url": "https://github.com/jardiamj",
"followers_url": "https://api.github.com/users/jardiamj/followers",
"following_url": "https://api.github.com/users/jardiamj/following{/other_user}",
"gists_url": "https://api.github.com/users/jardiamj/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jardiamj/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jardiamj/subscriptions",
"organizations_url": "https://api.github.com/users/jardiamj/orgs",
"repos_url": "https://api.github.com/users/jardiamj/repos",
"events_url": "https://api.github.com/users/jardiamj/events{/privacy}",
"received_events_url": "https://api.github.com/users/jardiamj/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "jardiamj",
"id": 1088732,
"node_id": "MDQ6VXNlcjEwODg3MzI=",
"avatar_url": "https://avatars.githubusercontent.com/u/1088732?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jardiamj",
"html_url": "https://github.com/jardiamj",
"followers_url": "https://api.gi... | null | [
"Add zone dimensions in Layout parameters. Perhaps assign a zone to each vertex and maintain a zoneMap? This would allow us to have non-rectangular uniform zones too.",
"This will no longer be needed once the ability to load graphML files is completed.",
"Closing this one because is no longer needed."
] | 2021-05-01T00:32:31 | 2023-06-19T19:52:55 | 2023-06-19T19:52:55 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | `zone() ` method in layout911 is hardcoded. resolve with proper code before closing out math of MVP | {
"login": "jardiamj",
"id": 1088732,
"node_id": "MDQ6VXNlcjEwODg3MzI=",
"avatar_url": "https://avatars.githubusercontent.com/u/1088732?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jardiamj",
"html_url": "https://github.com/jardiamj",
"followers_url": "https://api.github.com/users/jardiamj/followers",
"following_url": "https://api.github.com/users/jardiamj/following{/other_user}",
"gists_url": "https://api.github.com/users/jardiamj/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jardiamj/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jardiamj/subscriptions",
"organizations_url": "https://api.github.com/users/jardiamj/orgs",
"repos_url": "https://api.github.com/users/jardiamj/repos",
"events_url": "https://api.github.com/users/jardiamj/events{/privacy}",
"received_events_url": "https://api.github.com/users/jardiamj/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/186/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/186/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/185 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/185/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/185/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/185/events | https://github.com/UWB-Biocomputing/Graphitti/issues/185 | 873,061,988 | MDU6SXNzdWU4NzMwNjE5ODg= | 185 | Need to resolve how to accommodate Doxygen within repo | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423152,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTUy",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/documentation",
"name": "documentation",
"color": "0075ca",
"default": true,
"description": "Improvements or additions to documentation"
},
{
"id": 21... | closed | false | null | [] | null | [
"Seems like this was resolved with #286 "
] | 2021-04-30T18:40:02 | 2022-06-29T17:36:29 | 2022-06-29T17:36:28 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | We don't want to deal with tracking changes, but we do want doxygen files in the repo.
Might be some clues here: https://gist.github.com/francesco-romano/351a6ae457860c14ee7e907f2b0fc1a5 | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/185/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/185/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/184 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/184/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/184/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/184/events | https://github.com/UWB-Biocomputing/Graphitti/pull/184 | 872,970,504 | MDExOlB1bGxSZXF1ZXN0NjI3ODI2NzUx | 184 | Tori vivek 911 math jc | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [] | 2021-04-30T17:51:22 | 2021-05-01T04:11:23 | 2021-05-01T04:11:16 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | progress on 911 code, doesn't break on GPU version | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/184/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/184/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/184",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/184",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/184.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/184.patch",
"merged_at": "2021-05-01T04:11:16"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/183 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/183/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/183/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/183/events | https://github.com/UWB-Biocomputing/Graphitti/issues/183 | 872,894,052 | MDU6SXNzdWU4NzI4OTQwNTI= | 183 | Audit and refactor to not unnecessarily advanceEdge so many times. | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2159503249,
"node_id": "MDU6TGFiZWwyMTU5NTAzMjQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/cleanup",
"name": "cleanup",
"color": "0075ca",
"default": false,
"description": ""
},
{
"id": 2159510120,
"node_id": "MDU6TGFiZWwyMTU5NTEwMTIw",
... | closed | false | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url"... | null | [
"Same as #220 "
] | 2021-04-30T17:08:36 | 2021-07-27T04:24:25 | 2021-07-27T04:24:24 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | advanceEdge is written class-specifically and dynamic casts IAllVertices each time its called. it might be of interest to investigate how to refactor this to be faster.
| {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/183/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/183/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/182 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/182/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/182/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/182/events | https://github.com/UWB-Biocomputing/Graphitti/issues/182 | 869,151,582 | MDU6SXNzdWU4NjkxNTE1ODI= | 182 | Remove Probled neuron list from the simulator | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423149,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/bug",
"name": "bug",
"color": "d73a4a",
"default": true,
"description": "Something isn't working"
},
{
"id": 2159503249,
"node_id": "MDU6TGFiZWwyM... | closed | false | {
"login": "xiangli6",
"id": 72321545,
"node_id": "MDQ6VXNlcjcyMzIxNTQ1",
"avatar_url": "https://avatars.githubusercontent.com/u/72321545?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/xiangli6",
"html_url": "https://github.com/xiangli6",
"followers_url": "https://api.github.com/users/xiangli6/followers",
"following_url": "https://api.github.com/users/xiangli6/following{/other_user}",
"gists_url": "https://api.github.com/users/xiangli6/gists{/gist_id}",
"starred_url": "https://api.github.com/users/xiangli6/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/xiangli6/subscriptions",
"organizations_url": "https://api.github.com/users/xiangli6/orgs",
"repos_url": "https://api.github.com/users/xiangli6/repos",
"events_url": "https://api.github.com/users/xiangli6/events{/privacy}",
"received_events_url": "https://api.github.com/users/xiangli6/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "xiangli6",
"id": 72321545,
"node_id": "MDQ6VXNlcjcyMzIxNTQ1",
"avatar_url": "https://avatars.githubusercontent.com/u/72321545?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/xiangli6",
"html_url": "https://github.com/xiangli6",
"followers_url": "https://api.... | null | [
"This may be superceded/solved by #240 ",
"Plan is to eliminate probled neuron feature from the simulator. "
] | 2021-04-27T18:36:44 | 2023-04-12T18:09:32 | 2023-04-12T18:09:32 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | So, what do the HDF5 recorder classes get when they ask the Layout for the list of probed neurons? This seems like potentially a big problem.
- Certainly, the neuron layout classes should load the probed neuron list file name from the parameter manager and then load that neuron list, so this part definitely needs to be restored to the simulator.
- Then, the question above should be addressed with appropriate error checking. | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/182/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/182/timeline | null | not_planned | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/181 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/181/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/181/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/181/events | https://github.com/UWB-Biocomputing/Graphitti/issues/181 | 869,147,192 | MDU6SXNzdWU4NjkxNDcxOTI= | 181 | Document synapse spike delay queuing and fix it | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423152,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTUy",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/documentation",
"name": "documentation",
"color": "0075ca",
"default": true,
"description": "Improvements or additions to documentation"
},
{
"id": 21... | closed | false | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.c... | null | [
"Basically the same as #133 ",
"It is fixed by PR #315 "
] | 2021-04-27T18:33:48 | 2022-04-07T17:24:29 | 2022-04-07T17:24:28 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | Right now, I believe we have a bit index that indicates the front of the delay queue and we increment that, mod the queue length. Instead, it seems like the front of the queue should just be bit 0 and we should:
- Shift the queue instead of incrementing a front index value.
- Always insert new spikes at the same bit location, determined by the delay for that synapse.
This seems like it will reduce the state information associated with each synapse with no loss in performance. _However_, it is important to carefully document how it works right now, to make sure that this seeming improvement isn't actually a misunderstanding of subtle reasons why the current design isn't a slick idea. | {
"login": "PoojaPal2021",
"id": 100968608,
"node_id": "U_kgDOBgSooA",
"avatar_url": "https://avatars.githubusercontent.com/u/100968608?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/PoojaPal2021",
"html_url": "https://github.com/PoojaPal2021",
"followers_url": "https://api.github.com/users/PoojaPal2021/followers",
"following_url": "https://api.github.com/users/PoojaPal2021/following{/other_user}",
"gists_url": "https://api.github.com/users/PoojaPal2021/gists{/gist_id}",
"starred_url": "https://api.github.com/users/PoojaPal2021/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/PoojaPal2021/subscriptions",
"organizations_url": "https://api.github.com/users/PoojaPal2021/orgs",
"repos_url": "https://api.github.com/users/PoojaPal2021/repos",
"events_url": "https://api.github.com/users/PoojaPal2021/events{/privacy}",
"received_events_url": "https://api.github.com/users/PoojaPal2021/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/181/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/181/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/180 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/180/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/180/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/180/events | https://github.com/UWB-Biocomputing/Graphitti/issues/180 | 868,074,458 | MDU6SXNzdWU4NjgwNzQ0NTg= | 180 | move width_ and height_ to layout from simulator, then delete as they are no longer relevant | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2911226130,
"node_id": "MDU6TGFiZWwyOTExMjI2MTMw",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/refactor",
"name": "refactor",
"color": "d4c5f9",
"default": false,
"description": "doesn't change functionality, just improves code"
}
] | closed | false | {
"login": "jardiamj",
"id": 1088732,
"node_id": "MDQ6VXNlcjEwODg3MzI=",
"avatar_url": "https://avatars.githubusercontent.com/u/1088732?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jardiamj",
"html_url": "https://github.com/jardiamj",
"followers_url": "https://api.github.com/users/jardiamj/followers",
"following_url": "https://api.github.com/users/jardiamj/following{/other_user}",
"gists_url": "https://api.github.com/users/jardiamj/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jardiamj/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jardiamj/subscriptions",
"organizations_url": "https://api.github.com/users/jardiamj/orgs",
"repos_url": "https://api.github.com/users/jardiamj/repos",
"events_url": "https://api.github.com/users/jardiamj/events{/privacy}",
"received_events_url": "https://api.github.com/users/jardiamj/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "jardiamj",
"id": 1088732,
"node_id": "MDQ6VXNlcjEwODg3MzI=",
"avatar_url": "https://avatars.githubusercontent.com/u/1088732?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jardiamj",
"html_url": "https://github.com/jardiamj",
"followers_url": "https://api.gi... | null | [
"The `Model` (base class) uses these accessors in the `logSimStep()` method, which I believe is only used for debugging purposes. With the current plan to incorporate the 911 system, neither `Simulator` nor `Model` should assume that there will be a `width` and `height` in the Layout.\r\n\r\n```\r\nvoid Model::logS... | 2021-04-26T19:32:54 | 2023-10-04T15:42:20 | 2023-10-04T15:42:20 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | height_ and width_ and their accessors are currently in simulator and should be in layout. this requires a fair amount of refactoring in many files so buckle up!
and changing all configfiles. | {
"login": "jardiamj",
"id": 1088732,
"node_id": "MDQ6VXNlcjEwODg3MzI=",
"avatar_url": "https://avatars.githubusercontent.com/u/1088732?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jardiamj",
"html_url": "https://github.com/jardiamj",
"followers_url": "https://api.github.com/users/jardiamj/followers",
"following_url": "https://api.github.com/users/jardiamj/following{/other_user}",
"gists_url": "https://api.github.com/users/jardiamj/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jardiamj/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jardiamj/subscriptions",
"organizations_url": "https://api.github.com/users/jardiamj/orgs",
"repos_url": "https://api.github.com/users/jardiamj/repos",
"events_url": "https://api.github.com/users/jardiamj/events{/privacy}",
"received_events_url": "https://api.github.com/users/jardiamj/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/180/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/180/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/179 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/179/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/179/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/179/events | https://github.com/UWB-Biocomputing/Graphitti/issues/179 | 866,376,636 | MDU6SXNzdWU4NjYzNzY2MzY= | 179 | make 911 math | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 3092239149,
"node_id": "MDU6TGFiZWwzMDkyMjM5MTQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/NG911",
"name": "NG911",
"color": "f9d0c4",
"default": false,
"description": ""
}
] | closed | false | {
"login": "jardiamj",
"id": 1088732,
"node_id": "MDQ6VXNlcjEwODg3MzI=",
"avatar_url": "https://avatars.githubusercontent.com/u/1088732?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jardiamj",
"html_url": "https://github.com/jardiamj",
"followers_url": "https://api.github.com/users/jardiamj/followers",
"following_url": "https://api.github.com/users/jardiamj/following{/other_user}",
"gists_url": "https://api.github.com/users/jardiamj/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jardiamj/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jardiamj/subscriptions",
"organizations_url": "https://api.github.com/users/jardiamj/orgs",
"repos_url": "https://api.github.com/users/jardiamj/repos",
"events_url": "https://api.github.com/users/jardiamj/events{/privacy}",
"received_events_url": "https://api.github.com/users/jardiamj/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "jardiamj",
"id": 1088732,
"node_id": "MDQ6VXNlcjEwODg3MzI=",
"avatar_url": "https://avatars.githubusercontent.com/u/1088732?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jardiamj",
"html_url": "https://github.com/jardiamj",
"followers_url": "https://api.gi... | null | [
"Closing this one because it is no longer relevant."
] | 2021-04-23T19:31:09 | 2023-06-19T19:58:18 | 2023-06-19T19:58:18 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | psap, caller, responder setup | {
"login": "jardiamj",
"id": 1088732,
"node_id": "MDQ6VXNlcjEwODg3MzI=",
"avatar_url": "https://avatars.githubusercontent.com/u/1088732?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jardiamj",
"html_url": "https://github.com/jardiamj",
"followers_url": "https://api.github.com/users/jardiamj/followers",
"following_url": "https://api.github.com/users/jardiamj/following{/other_user}",
"gists_url": "https://api.github.com/users/jardiamj/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jardiamj/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jardiamj/subscriptions",
"organizations_url": "https://api.github.com/users/jardiamj/orgs",
"repos_url": "https://api.github.com/users/jardiamj/repos",
"events_url": "https://api.github.com/users/jardiamj/events{/privacy}",
"received_events_url": "https://api.github.com/users/jardiamj/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/179/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/179/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/178 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/178/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/178/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/178/events | https://github.com/UWB-Biocomputing/Graphitti/issues/178 | 866,331,796 | MDU6SXNzdWU4NjYzMzE3OTY= | 178 | Throw error when running a GPU 911 simulation | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 3092239149,
"node_id": "MDU6TGFiZWwzMDkyMjM5MTQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/NG911",
"name": "NG911",
"color": "f9d0c4",
"default": false,
"description": ""
}
] | open | false | null | [] | null | [] | 2021-04-23T18:15:52 | 2021-06-16T16:54:04 | null | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | The 911 files aren't made to run a GPU simulation, so it hits a segmentation fault. Check, throw an error, and quit the simulator when trying to run a GPU 911 simulation. Not sure where this should be done yet. | null | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/178/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/178/timeline | null | null | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/177 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/177/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/177/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/177/events | https://github.com/UWB-Biocomputing/Graphitti/pull/177 | 866,322,839 | MDExOlB1bGxSZXF1ZXN0NjIyMjM5MjU5 | 177 | Fixed GPU build that was broken from the 911 MVP files | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [] | 2021-04-23T18:01:07 | 2021-04-23T18:54:32 | 2021-04-23T18:54:28 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/177/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/177/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/177",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/177",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/177.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/177.patch",
"merged_at": "2021-04-23T18:54:28"
} | true | |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/176 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/176/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/176/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/176/events | https://github.com/UWB-Biocomputing/Graphitti/pull/176 | 863,121,495 | MDExOlB1bGxSZXF1ZXN0NjE5NTgyNTA5 | 176 | Example fix for separating the executables | {
"login": "BodilessSleeper",
"id": 43905102,
"node_id": "MDQ6VXNlcjQzOTA1MTAy",
"avatar_url": "https://avatars.githubusercontent.com/u/43905102?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/BodilessSleeper",
"html_url": "https://github.com/BodilessSleeper",
"followers_url": "https://api.github.com/users/BodilessSleeper/followers",
"following_url": "https://api.github.com/users/BodilessSleeper/following{/other_user}",
"gists_url": "https://api.github.com/users/BodilessSleeper/gists{/gist_id}",
"starred_url": "https://api.github.com/users/BodilessSleeper/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/BodilessSleeper/subscriptions",
"organizations_url": "https://api.github.com/users/BodilessSleeper/orgs",
"repos_url": "https://api.github.com/users/BodilessSleeper/repos",
"events_url": "https://api.github.com/users/BodilessSleeper/events{/privacy}",
"received_events_url": "https://api.github.com/users/BodilessSleeper/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [
"Looks good. This branch is ready to merge."
] | 2021-04-20T18:43:28 | 2021-05-05T21:02:51 | 2021-05-05T21:02:51 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | This addresses #172 | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/176/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/176/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/176",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/176",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/176.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/176.patch",
"merged_at": "2021-05-05T21:02:51"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/175 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/175/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/175/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/175/events | https://github.com/UWB-Biocomputing/Graphitti/pull/175 | 862,923,342 | MDExOlB1bGxSZXF1ZXN0NjE5NDEyNjI1 | 175 | Doxygen1.9.1 | {
"login": "kyledukart",
"id": 46544456,
"node_id": "MDQ6VXNlcjQ2NTQ0NDU2",
"avatar_url": "https://avatars.githubusercontent.com/u/46544456?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/kyledukart",
"html_url": "https://github.com/kyledukart",
"followers_url": "https://api.github.com/users/kyledukart/followers",
"following_url": "https://api.github.com/users/kyledukart/following{/other_user}",
"gists_url": "https://api.github.com/users/kyledukart/gists{/gist_id}",
"starred_url": "https://api.github.com/users/kyledukart/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/kyledukart/subscriptions",
"organizations_url": "https://api.github.com/users/kyledukart/orgs",
"repos_url": "https://api.github.com/users/kyledukart/repos",
"events_url": "https://api.github.com/users/kyledukart/events{/privacy}",
"received_events_url": "https://api.github.com/users/kyledukart/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [
"Let's make sure there is a list someplace of those classes that need improved documentation. Or is that just \"all classes\"? :^)"
] | 2021-04-20T15:12:38 | 2021-04-20T16:59:40 | 2021-04-20T16:58:55 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | {
"login": "kyledukart",
"id": 46544456,
"node_id": "MDQ6VXNlcjQ2NTQ0NDU2",
"avatar_url": "https://avatars.githubusercontent.com/u/46544456?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/kyledukart",
"html_url": "https://github.com/kyledukart",
"followers_url": "https://api.github.com/users/kyledukart/followers",
"following_url": "https://api.github.com/users/kyledukart/following{/other_user}",
"gists_url": "https://api.github.com/users/kyledukart/gists{/gist_id}",
"starred_url": "https://api.github.com/users/kyledukart/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/kyledukart/subscriptions",
"organizations_url": "https://api.github.com/users/kyledukart/orgs",
"repos_url": "https://api.github.com/users/kyledukart/repos",
"events_url": "https://api.github.com/users/kyledukart/events{/privacy}",
"received_events_url": "https://api.github.com/users/kyledukart/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/175/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/175/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/175",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/175",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/175.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/175.patch",
"merged_at": "2021-04-20T16:58:55"
} | true | |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/174 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/174/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/174/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/174/events | https://github.com/UWB-Biocomputing/Graphitti/pull/174 | 860,275,079 | MDExOlB1bGxSZXF1ZXN0NjE3MjA5ODE5 | 174 | Added override tags on subclass methods | {
"login": "BodilessSleeper",
"id": 43905102,
"node_id": "MDQ6VXNlcjQzOTA1MTAy",
"avatar_url": "https://avatars.githubusercontent.com/u/43905102?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/BodilessSleeper",
"html_url": "https://github.com/BodilessSleeper",
"followers_url": "https://api.github.com/users/BodilessSleeper/followers",
"following_url": "https://api.github.com/users/BodilessSleeper/following{/other_user}",
"gists_url": "https://api.github.com/users/BodilessSleeper/gists{/gist_id}",
"starred_url": "https://api.github.com/users/BodilessSleeper/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/BodilessSleeper/subscriptions",
"organizations_url": "https://api.github.com/users/BodilessSleeper/orgs",
"repos_url": "https://api.github.com/users/BodilessSleeper/repos",
"events_url": "https://api.github.com/users/BodilessSleeper/events{/privacy}",
"received_events_url": "https://api.github.com/users/BodilessSleeper/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [] | 2021-04-17T00:53:12 | 2021-04-20T16:54:05 | 2021-04-20T16:54:05 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | Not sure if I got them all since your last merge happened in the middle of me adding this, but this is at least most of them (I also fixed some spacing in the comments where I saw it)
Fixes #156 | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/174/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/174/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/174",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/174",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/174.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/174.patch",
"merged_at": "2021-04-20T16:54:05"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/173 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/173/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/173/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/173/events | https://github.com/UWB-Biocomputing/Graphitti/pull/173 | 860,087,882 | MDExOlB1bGxSZXF1ZXN0NjE3MDUyNDM0 | 173 | Renamed all setup methods | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [] | 2021-04-16T18:57:23 | 2021-04-20T16:40:29 | 2021-04-19T04:13:05 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | Fixes issue #164 - renames setupConnection, setupEdges, etc. to allocateMemory()
Moves edgSign from AllEdges to AllNeuroEdges
| {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/173/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/173/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/173",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/173",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/173.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/173.patch",
"merged_at": null
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/172 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/172/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/172/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/172/events | https://github.com/UWB-Biocomputing/Graphitti/issues/172 | 859,103,632 | MDU6SXNzdWU4NTkxMDM2MzI= | 172 | Separate names for each executable | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2159503249,
"node_id": "MDU6TGFiZWwyMTU5NTAzMjQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/cleanup",
"name": "cleanup",
"color": "0075ca",
"default": false,
"description": ""
}
] | closed | false | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
... | null | [
"So basically if we compile with CUDA_ENABLED in CMakeList.txt it should only compile ggraphitti otherwise we should only compile cgraphitti, right?",
"If I understood you correctly then the solution is provided in the above PR",
"@stiber you could close the issue now"
] | 2021-04-15T17:38:31 | 2021-05-14T17:12:34 | 2021-05-14T17:12:34 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | **CPU:** cgraphitti
**GPU:** ggraphitti | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/172/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/172/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/171 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/171/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/171/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/171/events | https://github.com/UWB-Biocomputing/Graphitti/issues/171 | 859,077,651 | MDU6SXNzdWU4NTkwNzc2NTE= | 171 | make google tests for 911 | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423156,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTU2",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/enhancement",
"name": "enhancement",
"color": "a2eeef",
"default": true,
"description": "New feature or request"
},
{
"id": 3092239149,
"node_id":... | open | false | {
"login": "jardiamj",
"id": 1088732,
"node_id": "MDQ6VXNlcjEwODg3MzI=",
"avatar_url": "https://avatars.githubusercontent.com/u/1088732?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jardiamj",
"html_url": "https://github.com/jardiamj",
"followers_url": "https://api.github.com/users/jardiamj/followers",
"following_url": "https://api.github.com/users/jardiamj/following{/other_user}",
"gists_url": "https://api.github.com/users/jardiamj/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jardiamj/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jardiamj/subscriptions",
"organizations_url": "https://api.github.com/users/jardiamj/orgs",
"repos_url": "https://api.github.com/users/jardiamj/repos",
"events_url": "https://api.github.com/users/jardiamj/events{/privacy}",
"received_events_url": "https://api.github.com/users/jardiamj/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "jardiamj",
"id": 1088732,
"node_id": "MDQ6VXNlcjEwODg3MzI=",
"avatar_url": "https://avatars.githubusercontent.com/u/1088732?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jardiamj",
"html_url": "https://github.com/jardiamj",
"followers_url": "https://api.gi... | null | [] | 2021-04-15T17:02:32 | 2022-11-10T16:54:29 | null | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | build out test suite for new application | null | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/171/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/171/timeline | null | null | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/170 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/170/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/170/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/170/events | https://github.com/UWB-Biocomputing/Graphitti/pull/170 | 859,031,641 | MDExOlB1bGxSZXF1ZXN0NjE2MTc3Mjk2 | 170 | Change class names | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [] | 2021-04-15T16:07:05 | 2021-04-15T17:27:08 | 2021-04-15T17:26:48 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | CPUSpikingModel.cpp --> CPUModel.cpp
CPUSpikingModel.h --> CPUModel.h
GPUSpikingModel.cpp -->GPUModel.cpp
GPUSpikingModel.h -->GPUModel.h
BGDriver --> Driver
| {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/170/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/170/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/170",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/170",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/170.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/170.patch",
"merged_at": "2021-04-15T17:26:48"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/169 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/169/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/169/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/169/events | https://github.com/UWB-Biocomputing/Graphitti/pull/169 | 858,986,823 | MDExOlB1bGxSZXF1ZXN0NjE2MTM5OTY1 | 169 | MVP is HERE | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [] | 2021-04-15T15:16:37 | 2021-04-15T17:24:00 | 2021-04-15T17:23:16 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | 
| {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/169/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/169/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/169",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/169",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/169.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/169.patch",
"merged_at": "2021-04-15T17:23:16"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/168 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/168/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/168/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/168/events | https://github.com/UWB-Biocomputing/Graphitti/pull/168 | 857,380,540 | MDExOlB1bGxSZXF1ZXN0NjE0ODExMjUy | 168 | Changed all occurences of NULL to nullptr | {
"login": "BodilessSleeper",
"id": 43905102,
"node_id": "MDQ6VXNlcjQzOTA1MTAy",
"avatar_url": "https://avatars.githubusercontent.com/u/43905102?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/BodilessSleeper",
"html_url": "https://github.com/BodilessSleeper",
"followers_url": "https://api.github.com/users/BodilessSleeper/followers",
"following_url": "https://api.github.com/users/BodilessSleeper/following{/other_user}",
"gists_url": "https://api.github.com/users/BodilessSleeper/gists{/gist_id}",
"starred_url": "https://api.github.com/users/BodilessSleeper/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/BodilessSleeper/subscriptions",
"organizations_url": "https://api.github.com/users/BodilessSleeper/orgs",
"repos_url": "https://api.github.com/users/BodilessSleeper/repos",
"events_url": "https://api.github.com/users/BodilessSleeper/events{/privacy}",
"received_events_url": "https://api.github.com/users/BodilessSleeper/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [
"We have just gone through major merges of large changes in the code base, so this will have to be reviewed very carefully. Files have moved, files have been renamed, classes have been merged/split/created, and class and variable names have been changed.",
"Should be done now"
] | 2021-04-13T22:58:45 | 2021-04-16T20:46:40 | 2021-04-16T20:46:40 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | Fixes issue #147 | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/168/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/168/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/168",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/168",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/168.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/168.patch",
"merged_at": "2021-04-16T20:46:40"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/167 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/167/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/167/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/167/events | https://github.com/UWB-Biocomputing/Graphitti/issues/167 | 857,223,242 | MDU6SXNzdWU4NTcyMjMyNDI= | 167 | Probably should rename allocDeviceStruct(), etc. | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423158,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTU4",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/good%20first%20issue",
"name": "good first issue",
"color": "7057ff",
"default": true,
"description": "Good for newcomers"
},
{
"id": 2159503249,
... | open | false | null | [] | null | [] | 2021-04-13T18:36:40 | 2021-04-13T18:36:40 | null | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | Probably should call methods like this something like: `allocateGPUMemory()`, to parallel `allocateCPUMemory()` methods.
https://github.com/UWB-Biocomputing/Graphitti/blob/40197651fce05e21ac39b7fd4f92ffe33ed851d6/Simulator/Core/GPUSpikingModel.cu#L112 | null | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/167/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/167/timeline | null | null | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/166 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/166/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/166/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/166/events | https://github.com/UWB-Biocomputing/Graphitti/pull/166 | 857,205,903 | MDExOlB1bGxSZXF1ZXN0NjE0NjY0NDQz | 166 | Revert "Changed all occurrences of NULL to nullptr" | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2159503249,
"node_id": "MDU6TGFiZWwyMTU5NTAzMjQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/cleanup",
"name": "cleanup",
"color": "0075ca",
"default": false,
"description": ""
}
] | closed | false | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.c... | null | [] | 2021-04-13T18:10:33 | 2021-04-13T18:15:27 | 2021-04-13T18:15:14 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | Reverts UWB-Biocomputing/Graphitti#162
Needs to be done because there are a lot of other changes to a number of files from other branches that need to be merged; this merge will just complicate merging those branches.
opens #147 | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/166/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/166/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/166",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/166",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/166.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/166.patch",
"merged_at": "2021-04-13T18:15:14"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/165 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/165/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/165/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/165/events | https://github.com/UWB-Biocomputing/Graphitti/pull/165 | 857,197,225 | MDExOlB1bGxSZXF1ZXN0NjE0NjU3MTAy | 165 | Graphitti refactor | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423152,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTUy",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/documentation",
"name": "documentation",
"color": "0075ca",
"default": true,
"description": "Improvements or additions to documentation"
},
{
"id": 21... | closed | false | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
... | null | [] | 2021-04-13T17:57:42 | 2021-04-13T18:40:52 | 2021-04-13T18:40:09 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | - Replaced all references of `BrainGrid` and 'DEBS' into `Graphitti` (except for external work and some links). Most changes occurred in `docs` and `CMakeLists.txt` files.
- Simulator executable is named 'graphitti'.
- Applied new path changes to all config files from previous out-of-source build changes.
- Updated some CMake minimum versions any version prior to 2.8.12 is deprecated on the rebuilt Linux machines.
- Updated any information that was outdated in the docs, but there is still more work to be done.
Haven't had time to test all the links but I will make sure everything is working after. Need to merge this quickly as I'm blocking Vivek and Tori since they branched off of this branch. | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/165/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/165/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/165",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/165",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/165.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/165.patch",
"merged_at": "2021-04-13T18:40:09"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/164 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/164/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/164/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/164/events | https://github.com/UWB-Biocomputing/Graphitti/issues/164 | 857,119,987 | MDU6SXNzdWU4NTcxMTk5ODc= | 164 | setup methods rename to allocateMemory() | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2911226130,
"node_id": "MDU6TGFiZWwyOTExMjI2MTMw",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/refactor",
"name": "refactor",
"color": "d4c5f9",
"default": false,
"description": "doesn't change functionality, just improves code"
}
] | closed | false | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url"... | null | [
"There are setup methods for a variety of classes, should they all be called \"allocateMemory\", or keep the class descriptions?\r\n\r\nsetupEdges() --> allocateMemory() and setupVertices -->allocateMemory()\r\nOR\r\nsetupEdges() --> allocateEdgeMemory() and setupVertices -->allocateVertexMemory()?",
"I would pre... | 2021-04-13T16:16:27 | 2021-04-20T16:46:00 | 2021-04-20T16:46:00 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | all setup methods just allocate memory. this should be reflected in the name of the function to promote clarity for the newcomers. | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/164/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/164/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/163 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/163/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/163/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/163/events | https://github.com/UWB-Biocomputing/Graphitti/pull/163 | 855,882,784 | MDExOlB1bGxSZXF1ZXN0NjEzNTUwMzc1 | 163 | Fixed a typo in the filename and the comment in the same file | {
"login": "BodilessSleeper",
"id": 43905102,
"node_id": "MDQ6VXNlcjQzOTA1MTAy",
"avatar_url": "https://avatars.githubusercontent.com/u/43905102?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/BodilessSleeper",
"html_url": "https://github.com/BodilessSleeper",
"followers_url": "https://api.github.com/users/BodilessSleeper/followers",
"following_url": "https://api.github.com/users/BodilessSleeper/following{/other_user}",
"gists_url": "https://api.github.com/users/BodilessSleeper/gists{/gist_id}",
"starred_url": "https://api.github.com/users/BodilessSleeper/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/BodilessSleeper/subscriptions",
"organizations_url": "https://api.github.com/users/BodilessSleeper/orgs",
"repos_url": "https://api.github.com/users/BodilessSleeper/repos",
"events_url": "https://api.github.com/users/BodilessSleeper/events{/privacy}",
"received_events_url": "https://api.github.com/users/BodilessSleeper/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [
"Seems that an internal project member had fixed this just a little while ago; he just hadn't closed the issue. We are still a work in progress, and are learning to be more disciplined in doing things like linking pull requests to issues and/or indicating in commits that they close particular issues."
] | 2021-04-12T11:37:49 | 2021-04-13T17:11:50 | 2021-04-13T17:11:50 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | Resolves issue #157 | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/163/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/163/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/163",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/163",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/163.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/163.patch",
"merged_at": null
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/162 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/162/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/162/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/162/events | https://github.com/UWB-Biocomputing/Graphitti/pull/162 | 855,033,779 | MDExOlB1bGxSZXF1ZXN0NjEyODc0MDM4 | 162 | Changed all occurrences of NULL to nullptr | {
"login": "BodilessSleeper",
"id": 43905102,
"node_id": "MDQ6VXNlcjQzOTA1MTAy",
"avatar_url": "https://avatars.githubusercontent.com/u/43905102?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/BodilessSleeper",
"html_url": "https://github.com/BodilessSleeper",
"followers_url": "https://api.github.com/users/BodilessSleeper/followers",
"following_url": "https://api.github.com/users/BodilessSleeper/following{/other_user}",
"gists_url": "https://api.github.com/users/BodilessSleeper/gists{/gist_id}",
"starred_url": "https://api.github.com/users/BodilessSleeper/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/BodilessSleeper/subscriptions",
"organizations_url": "https://api.github.com/users/BodilessSleeper/orgs",
"repos_url": "https://api.github.com/users/BodilessSleeper/repos",
"events_url": "https://api.github.com/users/BodilessSleeper/events{/privacy}",
"received_events_url": "https://api.github.com/users/BodilessSleeper/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [
"> This tackles issue #147 (the only problematic file could be Simulator/Utils/Timer.h which had NULL in a variable name where one could argue it's easier to have it left as it was while on the other hand one could say it's a bit confusing to have a variable that has NULL in it but actually references nullptr altho... | 2021-04-10T10:17:18 | 2021-04-10T23:15:18 | 2021-04-10T23:15:18 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | This tackles issue #147 (the only problematic file could be Simulator/Utils/Timer.h which had NULL in a variable name where one could argue it's easier to have it left as it was while on the other hand one could say it's a bit confusing to have a variable that has NULL in it but actually references nullptr although I don't see this variable name or even the variable in place ever being used somewhere in the code) | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/162/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/162/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/162",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/162",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/162.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/162.patch",
"merged_at": "2021-04-10T23:15:18"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/161 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/161/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/161/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/161/events | https://github.com/UWB-Biocomputing/Graphitti/pull/161 | 854,766,808 | MDExOlB1bGxSZXF1ZXN0NjEyNjU3OTEy | 161 | Graphitti mvp continue | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [] | 2021-04-09T18:40:00 | 2021-04-10T18:37:35 | 2021-04-09T23:19:59 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | branched off of graphitti_refactor and want to update the master. | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/161/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/161/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/161",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/161",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/161.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/161.patch",
"merged_at": null
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/160 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/160/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/160/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/160/events | https://github.com/UWB-Biocomputing/Graphitti/issues/160 | 851,645,516 | MDU6SXNzdWU4NTE2NDU1MTY= | 160 | Update GitHub Pages to reflect Graphitti branding. | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423152,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTUy",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/documentation",
"name": "documentation",
"color": "0075ca",
"default": true,
"description": "Improvements or additions to documentation"
},
{
"id": 21... | closed | false | {
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://api.github.com/users/jbrown725/followers",
"following_url": "https://api.github.com/users/jbrown725/following{/other_user}",
"gists_url": "https://api.github.com/users/jbrown725/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jbrown725/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jbrown725/subscriptions",
"organizations_url": "https://api.github.com/users/jbrown725/orgs",
"repos_url": "https://api.github.com/users/jbrown725/repos",
"events_url": "https://api.github.com/users/jbrown725/events{/privacy}",
"received_events_url": "https://api.github.com/users/jbrown725/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://a... | null | [
"* Current top-level Graphitti page should be (with light edits) the lab repo landing page, linking to the sub-repo landing pages.\r\n* Can still point to old BG repo, since that still works and is the only multi-GPU simulator.",
"Working on this issue, but not sure how to assign myself to it. Maybe I lack a perm... | 2021-04-06T17:32:39 | 2021-07-03T18:44:34 | 2021-07-03T18:44:34 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | {
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://api.github.com/users/jbrown725/followers",
"following_url": "https://api.github.com/users/jbrown725/following{/other_user}",
"gists_url": "https://api.github.com/users/jbrown725/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jbrown725/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jbrown725/subscriptions",
"organizations_url": "https://api.github.com/users/jbrown725/orgs",
"repos_url": "https://api.github.com/users/jbrown725/repos",
"events_url": "https://api.github.com/users/jbrown725/events{/privacy}",
"received_events_url": "https://api.github.com/users/jbrown725/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/160/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/160/timeline | null | completed | null | null | false | |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/159 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/159/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/159/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/159/events | https://github.com/UWB-Biocomputing/Graphitti/issues/159 | 851,635,132 | MDU6SXNzdWU4NTE2MzUxMzI= | 159 | Create debug and production CMake builds | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423156,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTU2",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/enhancement",
"name": "enhancement",
"color": "a2eeef",
"default": true,
"description": "New feature or request"
},
{
"id": 2144423158,
"node_id":... | closed | false | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url"... | null | [] | 2021-04-06T17:18:35 | 2021-07-26T18:47:53 | 2021-07-26T18:47:53 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | Right now, all our builds are effectively debug builds. At a minimum, we should compile with "-O3", and _without_ "-g" or "-pg", for production builds when we care about speed. | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/159/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/159/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/158 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/158/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/158/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/158/events | https://github.com/UWB-Biocomputing/Graphitti/issues/158 | 845,067,504 | MDU6SXNzdWU4NDUwNjc1MDQ= | 158 | Need new name for main .cpp file | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [] | 2021-03-30T18:55:18 | 2021-04-15T17:30:33 | 2021-04-15T17:26:48 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | Not just this comment, but also the filename. Moreover, we should alter the CMake configuration to name the executables appropriately, with the CPU and GPU builds producing different names.
https://github.com/UWB-Biocomputing/Graphitti/blob/2d15fe3ae34c3f4900946179d3c6f3f2b7780908/Simulator/Core/BGDriver.cpp#L2 | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/158/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/158/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/157 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/157/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/157/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/157/events | https://github.com/UWB-Biocomputing/Graphitti/issues/157 | 845,060,312 | MDU6SXNzdWU4NDUwNjAzMTI= | 157 | Fix misspelled filename | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [
"done in chris's commit. "
] | 2021-03-30T18:50:38 | 2021-04-13T14:43:54 | 2021-04-13T14:43:53 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | Not just in the comment; also the filename itself
https://github.com/UWB-Biocomputing/Graphitti/blob/2d15fe3ae34c3f4900946179d3c6f3f2b7780908/Testing/Utils/ParamaterManagerTests.cpp#L2 | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/157/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/157/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/156 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/156/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/156/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/156/events | https://github.com/UWB-Biocomputing/Graphitti/issues/156 | 844,026,407 | MDU6SXNzdWU4NDQwMjY0MDc= | 156 | Tag all methods in subclasses with override | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [] | 2021-03-30T03:21:15 | 2021-04-20T16:54:05 | 2021-04-20T16:54:05 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | Yes, it's optional, UWT it will increase our code quality. | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/156/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/156/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/155 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/155/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/155/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/155/events | https://github.com/UWB-Biocomputing/Graphitti/issues/155 | 844,025,918 | MDU6SXNzdWU4NDQwMjU5MTg= | 155 | Change initializations to C++11 style | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423156,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTU2",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/enhancement",
"name": "enhancement",
"color": "a2eeef",
"default": true,
"description": "New feature or request"
},
{
"id": 2144423158,
"node_id":... | open | false | {
"login": "d-kamath",
"id": 53545471,
"node_id": "MDQ6VXNlcjUzNTQ1NDcx",
"avatar_url": "https://avatars.githubusercontent.com/u/53545471?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/d-kamath",
"html_url": "https://github.com/d-kamath",
"followers_url": "https://api.github.com/users/d-kamath/followers",
"following_url": "https://api.github.com/users/d-kamath/following{/other_user}",
"gists_url": "https://api.github.com/users/d-kamath/gists{/gist_id}",
"starred_url": "https://api.github.com/users/d-kamath/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/d-kamath/subscriptions",
"organizations_url": "https://api.github.com/users/d-kamath/orgs",
"repos_url": "https://api.github.com/users/d-kamath/repos",
"events_url": "https://api.github.com/users/d-kamath/events{/privacy}",
"received_events_url": "https://api.github.com/users/d-kamath/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "d-kamath",
"id": 53545471,
"node_id": "MDQ6VXNlcjUzNTQ1NDcx",
"avatar_url": "https://avatars.githubusercontent.com/u/53545471?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/d-kamath",
"html_url": "https://github.com/d-kamath",
"followers_url": "https://api.... | null | [
"requires manually going through every init of an array in the simulator. good first project. ",
"And that connects to #24, switching from arrays to vectors.",
"I don't think you can use initializer lists at all for any heap arrays.\r\n`std::fill_n(array, count, value)` sets the first 'count' elements of the ar... | 2021-03-30T03:20:10 | 2023-10-02T02:46:19 | null | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | I.e., using "{}" | null | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/155/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/155/timeline | null | null | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/154 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/154/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/154/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/154/events | https://github.com/UWB-Biocomputing/Graphitti/pull/154 | 842,225,019 | MDExOlB1bGxSZXF1ZXN0NjAxODQzMDkw | 154 | Tori master temp | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [] | 2021-03-26T18:58:51 | 2022-01-29T23:08:34 | 2021-03-26T19:20:15 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | mvp beginnings | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/154/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/154/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/154",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/154",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/154.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/154.patch",
"merged_at": "2021-03-26T19:20:15"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/153 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/153/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/153/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/153/events | https://github.com/UWB-Biocomputing/Graphitti/pull/153 | 835,173,808 | MDExOlB1bGxSZXF1ZXN0NTk1ODY4NDgy | 153 | CMake out of source build | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2159503249,
"node_id": "MDU6TGFiZWwyMTU5NTAzMjQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/cleanup",
"name": "cleanup",
"color": "0075ca",
"default": false,
"description": ""
}
] | closed | false | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
... | null | [
"- The lib files are deleted in this branch so the files will be gone completely when the branch is merged. \r\n- I also fixed the small syntax problem with the include path. \r\n- I haven't changed the conflicting config files yet because the changes I made are pretty small and I'm not familiar with changes that h... | 2021-03-18T19:29:15 | 2021-03-30T20:07:28 | 2021-03-30T20:07:21 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | CMake is now configured to build out of the source files. Rather than building in the root directory, go into the `build` directory and type `cmake ..` followed by `make`. This will create all the build files, libraries and executables inside the `build` directory rather than in the source files.
NOTE: When running the simulation you must use `../` before the configuration file. For example
`./braingrid -c ../configfiles/test-tiny.xml`
- Created README file inside of build with instructions on how to build.
- Changed all paths in files to include a `../` at the beginning since the path to files is now changed.
- Updated top-level CMakeLists.txt that includes more information about the build.
- All the config file paths need to be updated before the merge, which will be done after the changes are approved.
Edit: Updated the GitHub actions to run in the build directory as well. | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/153/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/153/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/153",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/153",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/153.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/153.patch",
"merged_at": "2021-03-30T20:07:21"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/152 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/152/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/152/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/152/events | https://github.com/UWB-Biocomputing/Graphitti/pull/152 | 815,868,678 | MDExOlB1bGxSZXF1ZXN0NTc5NjI3MDE1 | 152 | Temp doxy master merge tori kyle | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [] | 2021-02-24T21:38:21 | 2021-02-24T21:40:13 | 2021-02-24T21:39:56 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/152/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/152/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/152",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/152",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/152.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/152.patch",
"merged_at": "2021-02-24T21:39:56"
} | true | |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/151 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/151/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/151/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/151/events | https://github.com/UWB-Biocomputing/Graphitti/pull/151 | 813,878,871 | MDExOlB1bGxSZXF1ZXN0NTc3OTUyNDUw | 151 | updates on comments | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [] | 2021-02-22T21:28:21 | 2022-01-29T23:10:07 | 2021-02-22T21:28:30 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/151/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/151/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/151",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/151",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/151.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/151.patch",
"merged_at": "2021-02-22T21:28:30"
} | true | |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/150 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/150/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/150/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/150/events | https://github.com/UWB-Biocomputing/Graphitti/issues/150 | 812,452,175 | MDU6SXNzdWU4MTI0NTIxNzU= | 150 | CPUSpikingModel shouldn't have any GPU stuff in it | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2159503249,
"node_id": "MDU6TGFiZWwyMTU5NTAzMjQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/cleanup",
"name": "cleanup",
"color": "0075ca",
"default": false,
"description": ""
}
] | closed | false | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url"... | null | [
"Just notices of error. no implementation. \r\n```/// Copy GPU Synapse data to CPU. (Inheritance, no implem)\r\nvoid CPUSpikingModel::copyGPUtoCPU() {\r\n LOG4CPLUS_WARN(fileLogger_, \"ERROR: CPUSpikingModel::copyGPUtoCPU() was called.\" << endl);\r\n exit(EXIT_FAILURE);\r\n}\r\n\r\n/// Copy CPU Synapse data to... | 2021-02-20T00:30:20 | 2021-04-13T14:31:56 | 2021-04-13T14:31:56 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | I think this just crept into this code, but it should just be in GPUSpikingModel.
https://github.com/UWB-Biocomputing/SummerOfBrain/blob/416b0c42beefdcc951e2b4ec441efafa0d6e529d/Simulator/Core/CPUSpikingModel.h#L65-L68 | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/150/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/150/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/149 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/149/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/149/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/149/events | https://github.com/UWB-Biocomputing/Graphitti/issues/149 | 811,304,166 | MDU6SXNzdWU4MTEzMDQxNjY= | 149 | acknowledgements link to publications | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423152,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTUy",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/documentation",
"name": "documentation",
"color": "0075ca",
"default": true,
"description": "Improvements or additions to documentation"
}
] | open | false | null | [] | null | [
"Also, I have a fairly decent list of what year each student contributed."
] | 2021-02-18T17:22:09 | 2024-09-09T15:04:47 | null | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | in acknowledgments.md under docs/_info, cite published papers under peoples name | null | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/149/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/149/timeline | null | null | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/148 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/148/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/148/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/148/events | https://github.com/UWB-Biocomputing/Graphitti/pull/148 | 809,507,419 | MDExOlB1bGxSZXF1ZXN0NTc0MzU5MDM5 | 148 | Tori neuron abstraction | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [
"Ready to merge!"
] | 2021-02-16T17:26:36 | 2021-02-22T00:54:50 | 2021-02-22T00:54:46 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | -50% of changes for refactor.
-test-small.xml works
-also passes unit tests. | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/148/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/148/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/148",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/148",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/148.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/148.patch",
"merged_at": "2021-02-22T00:54:46"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/147 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/147/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/147/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/147/events | https://github.com/UWB-Biocomputing/Graphitti/issues/147 | 807,429,892 | MDU6SXNzdWU4MDc0Mjk4OTI= | 147 | Change NULL to nullptr | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423158,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTU4",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/good%20first%20issue",
"name": "good first issue",
"color": "7057ff",
"default": true,
"description": "Good for newcomers"
},
{
"id": 2159503249,
... | closed | false | null | [] | null | [
"Does this relate to all files (eg files in ThirdParty) and even comments (eg in Simulator/Core/Simulator.cpp)?\r\n`/* PInput not in project yet\r\n if (pInput != NULL) {\r\n cout << \"Initializing input.\" << endl;\r\n pInput->init();\r\n }\r\n */`",
"I would say that it only applies to our files (not th... | 2021-02-12T17:44:44 | 2021-04-16T20:46:40 | 2021-04-16T20:46:40 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | There are still some places where this very minor cleanup is needed. | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/147/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/147/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/146 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/146/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/146/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/146/events | https://github.com/UWB-Biocomputing/Graphitti/pull/146 | 805,010,915 | MDExOlB1bGxSZXF1ZXN0NTcwNjg3Mjg1 | 146 | HDF5 working on local and Linux Machines | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423156,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTU2",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/enhancement",
"name": "enhancement",
"color": "a2eeef",
"default": true,
"description": "New feature or request"
}
] | closed | false | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
... | null | [] | 2021-02-09T23:25:46 | 2021-02-12T19:42:08 | 2021-02-12T19:42:04 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | HDF5 and XML show identical data when running a tiny simulation.
- Added HDF5 support to top-level and recorder CMakeLists.txt files.
- Cleaned up HDF5 classes to have the updated changes to Simulator, model, layout, etc.
- Recorder Factory can now create HDF5 recorders.
- Moved the recorder->init() call out of Model constructor and into model::setupSim() because the HDF5 Recorder needs to have model and layout initialized before the init call.
- Added a new config file to test the hdf5.
Edit: Looks like the tests are failing. I assume it's because HDF5 is not on the GitHub virtual machines.
Edit: Added flexibility to the compilation so that HDF5 is not needed to run. If HDF5 is found, it will enable a preprocessor micro that will compile the recorder code and link the HDF5 libraries. If not, the code will compile without it, just like the CUDA implementation.
| {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/146/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/146/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/146",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/146",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/146.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/146.patch",
"merged_at": "2021-02-12T19:42:04"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/145 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/145/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/145/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/145/events | https://github.com/UWB-Biocomputing/Graphitti/pull/145 | 801,554,762 | MDExOlB1bGxSZXF1ZXN0NTY3ODQ5MTk4 | 145 | Fixed memory leak in Neuron hierarchy | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423149,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/bug",
"name": "bug",
"color": "d73a4a",
"default": true,
"description": "Something isn't working"
}
] | closed | false | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
... | null | [] | 2021-02-04T19:02:09 | 2021-02-05T20:50:50 | 2021-02-05T20:50:42 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | - Size was being set to 0 in the wrong class's destructor causing a memory leak.
- Also improved parameter pass of OperationManager::registerOperation() to use a reference rather than a copy of the function.
EDIT: All memory leaks are fixed. The Functions we're leaking since the GenericFunction destructor wasn't being called due to it being unimplemented. | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/145/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/145/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/145",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/145",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/145.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/145.patch",
"merged_at": "2021-02-05T20:50:42"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/144 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/144/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/144/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/144/events | https://github.com/UWB-Biocomputing/Graphitti/issues/144 | 801,494,097 | MDU6SXNzdWU4MDE0OTQwOTc= | 144 | Create new abstract Vertex and Edge classes | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423156,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTU2",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/enhancement",
"name": "enhancement",
"color": "a2eeef",
"default": true,
"description": "New feature or request"
}
] | closed | false | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url"... | null | [
"collapse away \"I\" classes (example: iallvertices, ialledges, etc\" )\r\n\r\n",
"Part of what you're working on now; may already be done."
] | 2021-02-04T17:32:44 | 2021-04-13T14:32:38 | 2021-04-13T14:32:38 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | - Do a little directory reorg.
- Need to propagate name changes through the rest of the code.
| {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/144/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/144/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/143 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/143/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/143/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/143/events | https://github.com/UWB-Biocomputing/Graphitti/issues/143 | 781,552,182 | MDU6SXNzdWU3ODE1NTIxODI= | 143 | Think about making iSyn the return value of addSynapse | {
"login": "sky1204",
"id": 56418597,
"node_id": "MDQ6VXNlcjU2NDE4NTk3",
"avatar_url": "https://avatars.githubusercontent.com/u/56418597?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/sky1204",
"html_url": "https://github.com/sky1204",
"followers_url": "https://api.github.com/users/sky1204/followers",
"following_url": "https://api.github.com/users/sky1204/following{/other_user}",
"gists_url": "https://api.github.com/users/sky1204/gists{/gist_id}",
"starred_url": "https://api.github.com/users/sky1204/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/sky1204/subscriptions",
"organizations_url": "https://api.github.com/users/sky1204/orgs",
"repos_url": "https://api.github.com/users/sky1204/repos",
"events_url": "https://api.github.com/users/sky1204/events{/privacy}",
"received_events_url": "https://api.github.com/users/sky1204/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423152,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTUy",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/documentation",
"name": "documentation",
"color": "0075ca",
"default": true,
"description": "Improvements or additions to documentation"
},
{
"id": 21... | closed | false | null | [] | null | [
"Is this the same as #521? Perhaps an old version of that new issue? @stiber ",
"Yes.",
"Yes. Closing this one."
] | 2021-01-07T19:26:36 | 2023-09-30T00:42:46 | 2023-09-30T00:42:45 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | null | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/143/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/143/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/142 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/142/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/142/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/142/events | https://github.com/UWB-Biocomputing/Graphitti/pull/142 | 779,014,342 | MDExOlB1bGxSZXF1ZXN0NTQ5MDI2MDIy | 142 | Documentation overhaul | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [] | 2021-01-05T13:16:46 | 2021-01-12T18:00:17 | 2021-01-12T18:00:09 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | Trying to clean up old summer branches- can we review these changes today in meeting? | {
"login": "torisalvatore",
"id": 36680169,
"node_id": "MDQ6VXNlcjM2NjgwMTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/36680169?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/torisalvatore",
"html_url": "https://github.com/torisalvatore",
"followers_url": "https://api.github.com/users/torisalvatore/followers",
"following_url": "https://api.github.com/users/torisalvatore/following{/other_user}",
"gists_url": "https://api.github.com/users/torisalvatore/gists{/gist_id}",
"starred_url": "https://api.github.com/users/torisalvatore/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/torisalvatore/subscriptions",
"organizations_url": "https://api.github.com/users/torisalvatore/orgs",
"repos_url": "https://api.github.com/users/torisalvatore/repos",
"events_url": "https://api.github.com/users/torisalvatore/events{/privacy}",
"received_events_url": "https://api.github.com/users/torisalvatore/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/142/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/142/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/142",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/142",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/142.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/142.patch",
"merged_at": "2021-01-12T18:00:09"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/141 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/141/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/141/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/141/events | https://github.com/UWB-Biocomputing/Graphitti/issues/141 | 746,815,087 | MDU6SXNzdWU3NDY4MTUwODc= | 141 | Remove burstiness history computation and output | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423158,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTU4",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/good%20first%20issue",
"name": "good first issue",
"color": "7057ff",
"default": true,
"description": "Good for newcomers"
},
{
"id": 2159503249,
... | closed | false | {
"login": "PoojaPal2021",
"id": 100968608,
"node_id": "U_kgDOBgSooA",
"avatar_url": "https://avatars.githubusercontent.com/u/100968608?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/PoojaPal2021",
"html_url": "https://github.com/PoojaPal2021",
"followers_url": "https://api.github.com/users/PoojaPal2021/followers",
"following_url": "https://api.github.com/users/PoojaPal2021/following{/other_user}",
"gists_url": "https://api.github.com/users/PoojaPal2021/gists{/gist_id}",
"starred_url": "https://api.github.com/users/PoojaPal2021/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/PoojaPal2021/subscriptions",
"organizations_url": "https://api.github.com/users/PoojaPal2021/orgs",
"repos_url": "https://api.github.com/users/PoojaPal2021/repos",
"events_url": "https://api.github.com/users/PoojaPal2021/events{/privacy}",
"received_events_url": "https://api.github.com/users/PoojaPal2021/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "PoojaPal2021",
"id": 100968608,
"node_id": "U_kgDOBgSooA",
"avatar_url": "https://avatars.githubusercontent.com/u/100968608?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/PoojaPal2021",
"html_url": "https://github.com/PoojaPal2021",
"followers_url": "https:... | null | [
"Done, via Recorder class re-engineering."
] | 2020-11-19T18:15:08 | 2024-12-18T22:00:21 | 2024-12-18T22:00:20 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | This was something we used and we needed to compute it, at that time, during simulation. We can now compute it after the simulation, if needed. | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/141/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/141/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/140 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/140/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/140/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/140/events | https://github.com/UWB-Biocomputing/Graphitti/issues/140 | 746,794,620 | MDU6SXNzdWU3NDY3OTQ2MjA= | 140 | Move ConnStatic parameters into config files | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423158,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTU4",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/good%20first%20issue",
"name": "good first issue",
"color": "7057ff",
"default": true,
"description": "Good for newcomers"
},
{
"id": 2159503249,
... | closed | false | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url"... | null | [
"This will likely relate to initial 911 simulation approach.",
"Vivek going to update from Snigdha's branch. She has a good implementation of it. ",
"- [ ] Figure out and document ConnStatic parameters\r\n- [ ] Create test config files\r\n- [ ] Implement loadParameters for ConnStatic",
"@VivekGandhi54 is this... | 2020-11-19T17:44:04 | 2021-06-21T21:02:25 | 2021-06-21T21:02:25 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | {
"login": "VivekGandhi54",
"id": 29770062,
"node_id": "MDQ6VXNlcjI5NzcwMDYy",
"avatar_url": "https://avatars.githubusercontent.com/u/29770062?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/VivekGandhi54",
"html_url": "https://github.com/VivekGandhi54",
"followers_url": "https://api.github.com/users/VivekGandhi54/followers",
"following_url": "https://api.github.com/users/VivekGandhi54/following{/other_user}",
"gists_url": "https://api.github.com/users/VivekGandhi54/gists{/gist_id}",
"starred_url": "https://api.github.com/users/VivekGandhi54/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/VivekGandhi54/subscriptions",
"organizations_url": "https://api.github.com/users/VivekGandhi54/orgs",
"repos_url": "https://api.github.com/users/VivekGandhi54/repos",
"events_url": "https://api.github.com/users/VivekGandhi54/events{/privacy}",
"received_events_url": "https://api.github.com/users/VivekGandhi54/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/140/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/140/timeline | null | completed | null | null | false | |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/139 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/139/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/139/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/139/events | https://github.com/UWB-Biocomputing/Graphitti/pull/139 | 740,215,258 | MDExOlB1bGxSZXF1ZXN0NTE4NzQxNTM1 | 139 | Stdp fix | {
"login": "sky1204",
"id": 56418597,
"node_id": "MDQ6VXNlcjU2NDE4NTk3",
"avatar_url": "https://avatars.githubusercontent.com/u/56418597?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/sky1204",
"html_url": "https://github.com/sky1204",
"followers_url": "https://api.github.com/users/sky1204/followers",
"following_url": "https://api.github.com/users/sky1204/following{/other_user}",
"gists_url": "https://api.github.com/users/sky1204/gists{/gist_id}",
"starred_url": "https://api.github.com/users/sky1204/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/sky1204/subscriptions",
"organizations_url": "https://api.github.com/users/sky1204/orgs",
"repos_url": "https://api.github.com/users/sky1204/repos",
"events_url": "https://api.github.com/users/sky1204/events{/privacy}",
"received_events_url": "https://api.github.com/users/sky1204/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [
"@rashwini21 this pull request may have useful CUDA code or it may not. Just want to make sure before we toss this and its associated branch as having already been (manually) merged into the codebase. Snigdha starts the pull request off by mentioning CUDA and fixes to event queueing and the synapse index map, so I ... | 2020-11-10T20:20:11 | 2024-07-30T22:17:12 | 2024-07-30T22:17:01 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | Creating a pull request for CUDA since this is where I forked my branch, and CUDA hasn't been merged with master. These are just the fixes made to correct the indexing of the circular queue and synapse index map. | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/139/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/139/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/139",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/139",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/139.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/139.patch",
"merged_at": null
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/138 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/138/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/138/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/138/events | https://github.com/UWB-Biocomputing/Graphitti/pull/138 | 740,210,127 | MDExOlB1bGxSZXF1ZXN0NTE4NzM3MjEx | 138 | Stdp fix | {
"login": "sky1204",
"id": 56418597,
"node_id": "MDQ6VXNlcjU2NDE4NTk3",
"avatar_url": "https://avatars.githubusercontent.com/u/56418597?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/sky1204",
"html_url": "https://github.com/sky1204",
"followers_url": "https://api.github.com/users/sky1204/followers",
"following_url": "https://api.github.com/users/sky1204/following{/other_user}",
"gists_url": "https://api.github.com/users/sky1204/gists{/gist_id}",
"starred_url": "https://api.github.com/users/sky1204/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/sky1204/subscriptions",
"organizations_url": "https://api.github.com/users/sky1204/orgs",
"repos_url": "https://api.github.com/users/sky1204/repos",
"events_url": "https://api.github.com/users/sky1204/events{/privacy}",
"received_events_url": "https://api.github.com/users/sky1204/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [] | closed | false | null | [] | null | [] | 2020-11-10T20:12:27 | 2020-11-10T20:14:44 | 2020-11-10T20:14:44 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | {
"login": "sky1204",
"id": 56418597,
"node_id": "MDQ6VXNlcjU2NDE4NTk3",
"avatar_url": "https://avatars.githubusercontent.com/u/56418597?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/sky1204",
"html_url": "https://github.com/sky1204",
"followers_url": "https://api.github.com/users/sky1204/followers",
"following_url": "https://api.github.com/users/sky1204/following{/other_user}",
"gists_url": "https://api.github.com/users/sky1204/gists{/gist_id}",
"starred_url": "https://api.github.com/users/sky1204/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/sky1204/subscriptions",
"organizations_url": "https://api.github.com/users/sky1204/orgs",
"repos_url": "https://api.github.com/users/sky1204/repos",
"events_url": "https://api.github.com/users/sky1204/events{/privacy}",
"received_events_url": "https://api.github.com/users/sky1204/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/138/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/138/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/138",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/138",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/138.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/138.patch",
"merged_at": null
} | true | |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/137 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/137/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/137/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/137/events | https://github.com/UWB-Biocomputing/Graphitti/issues/137 | 737,194,134 | MDU6SXNzdWU3MzcxOTQxMzQ= | 137 | Probably should just return the pointer value to the GPU-side struct when allocated | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423158,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTU4",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/good%20first%20issue",
"name": "good first issue",
"color": "7057ff",
"default": true,
"description": "Good for newcomers"
},
{
"id": 2159406989,
... | open | false | null | [] | null | [] | 2020-11-05T19:09:48 | 2024-09-09T15:05:08 | null | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | The code below is an example of passing a pointer to a pointer (or by reference) to a void method, where the intent is that that is purely a return value. In such cases, we really should just have the method return the pointer value, and save that on the calling function side.
https://github.com/UWB-Biocomputing/SummerOfBrain/blob/df28ffb26f06d9db60d47de72c5a98ff95ceaa73/Simulation/Edges/AllSpikingSynapses_d.cu#L30 | null | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/137/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/137/timeline | null | null | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/136 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/136/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/136/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/136/events | https://github.com/UWB-Biocomputing/Graphitti/issues/136 | 737,192,008 | MDU6SXNzdWU3MzcxOTIwMDg= | 136 | Should really come up with a single type for GPU-side pointers | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423152,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTUy",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/documentation",
"name": "documentation",
"color": "0075ca",
"default": true,
"description": "Improvements or additions to documentation"
},
{
"id": 21... | open | false | null | [] | null | [
"First need to validate GPU results against reference simulator release from BrainGrid repo.",
"we need to fix the GPU first before addressing this issue. Chris is working on this (maybe?)"
] | 2020-11-05T19:07:59 | 2024-09-09T15:05:39 | null | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | And the variable names should incorporate the information about what thing is store on the device (rather than having that in the typename). So, for example, maybe the typename should be `GPUAddress` (unanswered question: is this just a typedef for `void*`, or something else), and the variable name (in the example below) should be `allSynapsesDeviceProperties_`.
https://github.com/UWB-Biocomputing/SummerOfBrain/blob/3b5c5b19d34f8de99d0380b448cbe0c6bcd03c76/Simulation/Core/GPUSpikingModel.h#L121-L124 | null | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/136/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/136/timeline | null | null | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/135 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/135/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/135/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/135/events | https://github.com/UWB-Biocomputing/Graphitti/issues/135 | 732,543,604 | MDU6SXNzdWU3MzI1NDM2MDQ= | 135 | Need to modify how we do builds | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423152,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTUy",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/documentation",
"name": "documentation",
"color": "0075ca",
"default": true,
"description": "Improvements or additions to documentation"
},
{
"id": 21... | closed | false | null | [] | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/milestones/5",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/milestone/5",
"labels_url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/milestones/5/labels",
"id": 5698911,
"node_id": "MDk6TWlsZXN0b25lNTY5ODkxMQ==",
"number": 5,
"title": "Fall 2020",
"description": "",
"creator": {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
},
"open_issues": 0,
"closed_issues": 5,
"state": "closed",
"created_at": "2020-07-25T19:45:38",
"updated_at": "2021-08-27T23:44:10",
"due_on": "2020-12-31T08:00:00",
"closed_at": "2021-04-02T00:03:50"
} | [] | 2020-10-29T18:13:15 | 2021-04-04T21:20:15 | 2021-04-04T21:20:15 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | We should be doing out-of-source builds. I believe that just means we need to have a "build" subdirectory that is in .gitignore and, when we want to build braingrid, we just cd there and do a `cmake ..`. Assuming this doesn't cause problems, we should document this as the standard way to build the software. | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/135/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/135/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/134 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/134/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/134/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/134/events | https://github.com/UWB-Biocomputing/Graphitti/pull/134 | 732,535,116 | MDExOlB1bGxSZXF1ZXN0NTEyNDYwMzI3 | 134 | Synapse destructor fix | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423149,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/bug",
"name": "bug",
"color": "d73a4a",
"default": true,
"description": "Something isn't working"
},
{
"id": 2159510120,
"node_id": "MDU6TGFiZWwyM... | closed | false | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
... | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/milestones/5",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/milestone/5",
"labels_url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/milestones/5/labels",
"id": 5698911,
"node_id": "MDk6TWlsZXN0b25lNTY5ODkxMQ==",
"number": 5,
"title": "Fall 2020",
"description": "",
"creator": {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
},
"open_issues": 0,
"closed_issues": 5,
"state": "closed",
"created_at": "2020-07-25T19:45:38",
"updated_at": "2021-08-27T23:44:10",
"due_on": "2020-12-31T08:00:00",
"closed_at": "2021-04-02T00:03:50"
} | [
"Can this pull request be simplified now?"
] | 2020-10-29T18:00:17 | 2020-11-17T21:44:58 | 2020-11-17T21:44:54 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | - Fixed a line of a code in AllSpikingNeurons that was creating a copy of the Synapses an immense number of times per time step. This caused the destructor to go off for AllSpikingSynapses and AllSynapses when the method exited, which deleted the arrays that we still needed. Trying to access the arrays after being deleted caused a Segmentation fault.
- This fix makes it so that no copies are created which allows us to restore the destructors back to normal.
- Unfortunately, I need changes from the CUDA branch, which makes this pull request just as large as the CUDA branch (at least until that branch is merged). Changes were made in ```AllSpikingNeurons::advanceNeurons()```, ```AllSpikingSynapses::~AllSpikingSynapses()``` and ```AllSynapses::~AllSynapses()``` | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/134/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/134/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/134",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/134",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/134.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/134.patch",
"merged_at": "2020-11-17T21:44:54"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/133 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/133/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/133/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/133/events | https://github.com/UWB-Biocomputing/Graphitti/issues/133 | 730,742,480 | MDU6SXNzdWU3MzA3NDI0ODA= | 133 | Audit synapse delay queue implementation and improve/simplify it | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423152,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTUy",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/documentation",
"name": "documentation",
"color": "0075ca",
"default": true,
"description": "Improvements or additions to documentation"
},
{
"id": 21... | closed | false | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.c... | null | [
"This is an old issue and is superseded by #181 and others."
] | 2020-10-27T19:19:48 | 2022-04-05T22:33:26 | 2022-04-05T22:33:26 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | 1. Need to understand and document current implementation.
2. Rather than a circular array implementation, really should just shift bits upon dequeue. This would allow enqueue at a fixed bit location.
3. We really need to clean up unnecessary use of references merely to index into arrays. Why is this there? Is there an advantage on the GPU, and we're trying to keep the CPU looking the same? It doesn't seem like it should be better on the GPU, but this should be nailed down.
4. Document the final result thoroughly!! | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/133/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/133/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/132 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/132/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/132/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/132/events | https://github.com/UWB-Biocomputing/Graphitti/pull/132 | 729,948,336 | MDExOlB1bGxSZXF1ZXN0NTEwMzQwNzYy | 132 | Simulation can now run GPU simulations | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423156,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTU2",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/enhancement",
"name": "enhancement",
"color": "a2eeef",
"default": true,
"description": "New feature or request"
},
{
"id": 2159406989,
"node_id":... | closed | false | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
... | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/milestones/5",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/milestone/5",
"labels_url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/milestones/5/labels",
"id": 5698911,
"node_id": "MDk6TWlsZXN0b25lNTY5ODkxMQ==",
"number": 5,
"title": "Fall 2020",
"description": "",
"creator": {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
},
"open_issues": 0,
"closed_issues": 5,
"state": "closed",
"created_at": "2020-07-25T19:45:38",
"updated_at": "2021-08-27T23:44:10",
"due_on": "2020-12-31T08:00:00",
"closed_at": "2021-04-02T00:03:50"
} | [] | 2020-10-26T22:20:36 | 2020-11-17T00:16:10 | 2020-11-17T00:16:05 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | - CUDA files brought in from old repo (Mostly unchanged besides variable renaming).
- GPU build can be toggled setting ```BRAINGRID_CUDA``` variable to either ```YES``` or ```NO```
- CPU deallocation logic moved to destructors and deallocation methods we're removed. GPUSpikingModel is responsible for deallocation on the GPU, the destructors are responsible for deallocation on the CPU.
- By default, the CUDA architecture is set to SM_35. This happens in the top-level CMakeLists.txt document as well as all others that create libraries.
Closes #128 | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/132/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/132/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/132",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/132",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/132.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/132.patch",
"merged_at": "2020-11-17T00:16:05"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/131 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/131/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/131/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/131/events | https://github.com/UWB-Biocomputing/Graphitti/issues/131 | 728,443,783 | MDU6SXNzdWU3Mjg0NDM3ODM= | 131 | Implement remaining operations | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423158,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTU4",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/good%20first%20issue",
"name": "good first issue",
"color": "7057ff",
"default": true,
"description": "Good for newcomers"
},
{
"id": 2159406989,
... | open | false | {
"login": "BenYang2002",
"id": 96927991,
"node_id": "U_kgDOBccA9w",
"avatar_url": "https://avatars.githubusercontent.com/u/96927991?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/BenYang2002",
"html_url": "https://github.com/BenYang2002",
"followers_url": "https://api.github.com/users/BenYang2002/followers",
"following_url": "https://api.github.com/users/BenYang2002/following{/other_user}",
"gists_url": "https://api.github.com/users/BenYang2002/gists{/gist_id}",
"starred_url": "https://api.github.com/users/BenYang2002/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/BenYang2002/subscriptions",
"organizations_url": "https://api.github.com/users/BenYang2002/orgs",
"repos_url": "https://api.github.com/users/BenYang2002/repos",
"events_url": "https://api.github.com/users/BenYang2002/events{/privacy}",
"received_events_url": "https://api.github.com/users/BenYang2002/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "BenYang2002",
"id": 96927991,
"node_id": "U_kgDOBccA9w",
"avatar_url": "https://avatars.githubusercontent.com/u/96927991?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/BenYang2002",
"html_url": "https://github.com/BenYang2002",
"followers_url": "https://api... | null | [
"Includes #130 and #122.",
"Here's a note from [PR 693](https://github.com/UWB-Biocomputing/Graphitti/pull/693#discussion_r1747538637):\r\n\r\nBefore this change, `registerSpikeHistoryVariable` (now `registerHistoryVariables`) was a member function of `AllSpikingNeurons` and was called within `AllSpikingNeurons::... | 2020-10-23T18:45:04 | 2025-03-31T22:35:40 | null | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | Refer to Operations.h. Implement the remaining operations in this order:
- [ ] copyFromGPU
- [ ] deallocateGPUMemory
- [ ] copyToGPU
| null | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/131/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/131/timeline | null | null | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/130 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/130/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/130/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/130/events | https://github.com/UWB-Biocomputing/Graphitti/issues/130 | 715,010,327 | MDU6SXNzdWU3MTUwMTAzMjc= | 130 | Is there a need to add a "copy results from GPU" operation to the operation manager? | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423156,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTU2",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/enhancement",
"name": "enhancement",
"color": "a2eeef",
"default": true,
"description": "New feature or request"
},
{
"id": 2144423158,
"node_id":... | open | false | {
"login": "BenYang2002",
"id": 96927991,
"node_id": "U_kgDOBccA9w",
"avatar_url": "https://avatars.githubusercontent.com/u/96927991?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/BenYang2002",
"html_url": "https://github.com/BenYang2002",
"followers_url": "https://api.github.com/users/BenYang2002/followers",
"following_url": "https://api.github.com/users/BenYang2002/following{/other_user}",
"gists_url": "https://api.github.com/users/BenYang2002/gists{/gist_id}",
"starred_url": "https://api.github.com/users/BenYang2002/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/BenYang2002/subscriptions",
"organizations_url": "https://api.github.com/users/BenYang2002/orgs",
"repos_url": "https://api.github.com/users/BenYang2002/repos",
"events_url": "https://api.github.com/users/BenYang2002/events{/privacy}",
"received_events_url": "https://api.github.com/users/BenYang2002/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "BenYang2002",
"id": 96927991,
"node_id": "U_kgDOBccA9w",
"avatar_url": "https://avatars.githubusercontent.com/u/96927991?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/BenYang2002",
"html_url": "https://github.com/BenYang2002",
"followers_url": "https://api... | null | [
"I think this is done, but should be part of pushing the operation manager approach into the post-simulation part of the program."
] | 2020-10-05T17:02:21 | 2025-01-22T19:04:08 | null | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | null | null | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/130/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/130/timeline | null | null | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/129 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/129/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/129/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/129/events | https://github.com/UWB-Biocomputing/Graphitti/issues/129 | 711,338,214 | MDU6SXNzdWU3MTEzMzgyMTQ= | 129 | Change Synapse class arrays to vectors | {
"login": "sky1204",
"id": 56418597,
"node_id": "MDQ6VXNlcjU2NDE4NTk3",
"avatar_url": "https://avatars.githubusercontent.com/u/56418597?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/sky1204",
"html_url": "https://github.com/sky1204",
"followers_url": "https://api.github.com/users/sky1204/followers",
"following_url": "https://api.github.com/users/sky1204/following{/other_user}",
"gists_url": "https://api.github.com/users/sky1204/gists{/gist_id}",
"starred_url": "https://api.github.com/users/sky1204/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/sky1204/subscriptions",
"organizations_url": "https://api.github.com/users/sky1204/orgs",
"repos_url": "https://api.github.com/users/sky1204/repos",
"events_url": "https://api.github.com/users/sky1204/events{/privacy}",
"received_events_url": "https://api.github.com/users/sky1204/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423158,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTU4",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/good%20first%20issue",
"name": "good first issue",
"color": "7057ff",
"default": true,
"description": "Good for newcomers"
},
{
"id": 2159503249,
... | closed | false | {
"login": "d-kamath",
"id": 53545471,
"node_id": "MDQ6VXNlcjUzNTQ1NDcx",
"avatar_url": "https://avatars.githubusercontent.com/u/53545471?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/d-kamath",
"html_url": "https://github.com/d-kamath",
"followers_url": "https://api.github.com/users/d-kamath/followers",
"following_url": "https://api.github.com/users/d-kamath/following{/other_user}",
"gists_url": "https://api.github.com/users/d-kamath/gists{/gist_id}",
"starred_url": "https://api.github.com/users/d-kamath/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/d-kamath/subscriptions",
"organizations_url": "https://api.github.com/users/d-kamath/orgs",
"repos_url": "https://api.github.com/users/d-kamath/repos",
"events_url": "https://api.github.com/users/d-kamath/events{/privacy}",
"received_events_url": "https://api.github.com/users/d-kamath/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "d-kamath",
"id": 53545471,
"node_id": "MDQ6VXNlcjUzNTQ1NDcx",
"avatar_url": "https://avatars.githubusercontent.com/u/53545471?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/d-kamath",
"html_url": "https://github.com/d-kamath",
"followers_url": "https://api.... | null | [
"This is connected to issue #24 ",
"Or maybe valarrays?"
] | 2020-09-29T18:09:13 | 2023-04-10T17:18:06 | 2023-04-10T17:18:06 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | null | {
"login": "d-kamath",
"id": 53545471,
"node_id": "MDQ6VXNlcjUzNTQ1NDcx",
"avatar_url": "https://avatars.githubusercontent.com/u/53545471?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/d-kamath",
"html_url": "https://github.com/d-kamath",
"followers_url": "https://api.github.com/users/d-kamath/followers",
"following_url": "https://api.github.com/users/d-kamath/following{/other_user}",
"gists_url": "https://api.github.com/users/d-kamath/gists{/gist_id}",
"starred_url": "https://api.github.com/users/d-kamath/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/d-kamath/subscriptions",
"organizations_url": "https://api.github.com/users/d-kamath/orgs",
"repos_url": "https://api.github.com/users/d-kamath/repos",
"events_url": "https://api.github.com/users/d-kamath/events{/privacy}",
"received_events_url": "https://api.github.com/users/d-kamath/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/129/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/129/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/128 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/128/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/128/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/128/events | https://github.com/UWB-Biocomputing/Graphitti/issues/128 | 698,331,902 | MDU6SXNzdWU2OTgzMzE5MDI= | 128 | Get CUDA compilation using CMake | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423156,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTU2",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/enhancement",
"name": "enhancement",
"color": "a2eeef",
"default": true,
"description": "New feature or request"
},
{
"id": 2159406989,
"node_id":... | closed | false | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
... | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/milestones/6",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/milestone/6",
"labels_url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/milestones/6/labels",
"id": 5774074,
"node_id": "MDk6TWlsZXN0b25lNTc3NDA3NA==",
"number": 6,
"title": "Sprint 6",
"description": "",
"creator": {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
},
"open_issues": 1,
"closed_issues": 7,
"state": "closed",
"created_at": "2020-08-14T18:47:35",
"updated_at": "2021-04-02T00:25:48",
"due_on": "2020-09-25T07:00:00",
"closed_at": "2021-04-02T00:04:08"
} | [
"Let me know if you need to set up a time to walk through CUDA concepts, compilation, or code."
] | 2020-09-10T18:24:12 | 2020-11-17T00:16:05 | 2020-11-17T00:16:05 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/128/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/128/timeline | null | completed | null | null | false | |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/127 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/127/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/127/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/127/events | https://github.com/UWB-Biocomputing/Graphitti/pull/127 | 697,610,436 | MDExOlB1bGxSZXF1ZXN0NDgzNTM0Mzgy | 127 | Snigdha synapse revised | {
"login": "sky1204",
"id": 56418597,
"node_id": "MDQ6VXNlcjU2NDE4NTk3",
"avatar_url": "https://avatars.githubusercontent.com/u/56418597?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/sky1204",
"html_url": "https://github.com/sky1204",
"followers_url": "https://api.github.com/users/sky1204/followers",
"following_url": "https://api.github.com/users/sky1204/following{/other_user}",
"gists_url": "https://api.github.com/users/sky1204/gists{/gist_id}",
"starred_url": "https://api.github.com/users/sky1204/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/sky1204/subscriptions",
"organizations_url": "https://api.github.com/users/sky1204/orgs",
"repos_url": "https://api.github.com/users/sky1204/repos",
"events_url": "https://api.github.com/users/sky1204/events{/privacy}",
"received_events_url": "https://api.github.com/users/sky1204/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2159503249,
"node_id": "MDU6TGFiZWwyMTU5NTAzMjQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/cleanup",
"name": "cleanup",
"color": "0075ca",
"default": false,
"description": ""
}
] | closed | false | null | [] | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/milestones/6",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/milestone/6",
"labels_url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/milestones/6/labels",
"id": 5774074,
"node_id": "MDk6TWlsZXN0b25lNTc3NDA3NA==",
"number": 6,
"title": "Sprint 6",
"description": "",
"creator": {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
},
"open_issues": 1,
"closed_issues": 7,
"state": "closed",
"created_at": "2020-08-14T18:47:35",
"updated_at": "2021-04-02T00:25:48",
"due_on": "2020-09-25T07:00:00",
"closed_at": "2021-04-02T00:04:08"
} | [
"I think we need to add `ThirdParty/log4cplus-2.0.2/bin/` to the `.gitignore`, but I'm not sure.",
"Outdated branch"
] | 2020-09-10T08:29:28 | 2021-02-16T19:24:26 | 2021-02-16T19:23:36 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | {
"login": "sky1204",
"id": 56418597,
"node_id": "MDQ6VXNlcjU2NDE4NTk3",
"avatar_url": "https://avatars.githubusercontent.com/u/56418597?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/sky1204",
"html_url": "https://github.com/sky1204",
"followers_url": "https://api.github.com/users/sky1204/followers",
"following_url": "https://api.github.com/users/sky1204/following{/other_user}",
"gists_url": "https://api.github.com/users/sky1204/gists{/gist_id}",
"starred_url": "https://api.github.com/users/sky1204/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/sky1204/subscriptions",
"organizations_url": "https://api.github.com/users/sky1204/orgs",
"repos_url": "https://api.github.com/users/sky1204/repos",
"events_url": "https://api.github.com/users/sky1204/events{/privacy}",
"received_events_url": "https://api.github.com/users/sky1204/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/127/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/127/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/127",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/127",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/127.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/127.patch",
"merged_at": null
} | true | |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/126 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/126/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/126/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/126/events | https://github.com/UWB-Biocomputing/Graphitti/pull/126 | 697,187,003 | MDExOlB1bGxSZXF1ZXN0NDgzMTYxNTQx | 126 | Added log4cplus into all simulator objects and did extensive clean up | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423156,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTU2",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/enhancement",
"name": "enhancement",
"color": "a2eeef",
"default": true,
"description": "New feature or request"
},
{
"id": 2159503249,
"node_id":... | closed | false | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
... | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/milestones/6",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/milestone/6",
"labels_url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/milestones/6/labels",
"id": 5774074,
"node_id": "MDk6TWlsZXN0b25lNTc3NDA3NA==",
"number": 6,
"title": "Sprint 6",
"description": "",
"creator": {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
},
"open_issues": 1,
"closed_issues": 7,
"state": "closed",
"created_at": "2020-08-14T18:47:35",
"updated_at": "2021-04-02T00:25:48",
"due_on": "2020-09-25T07:00:00",
"closed_at": "2021-04-02T00:04:08"
} | [] | 2020-09-09T21:58:18 | 2020-09-25T22:58:18 | 2020-09-25T22:58:11 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | - There are three loggers now, one for the console, one for logging file, and one for neuron related information.
- All simulator objects now have at least one logger as a member variable.
- All previous DEBUG macros replaced with log4cplus macros using the most relevant logger.
- Commenting cleanup throughout all simulation object files.
- Removed sim info from all USE_GPU sections.
- Went through all simulator object files and did naming cleanup to fit coding standards (camelCasing rather than underscores) and to add more consistently.
Closes #113 Closes #118 | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/126/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/126/timeline | null | null | false | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/pulls/126",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/126",
"diff_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/126.diff",
"patch_url": "https://github.com/UWB-Biocomputing/Graphitti/pull/126.patch",
"merged_at": "2020-09-25T22:58:10"
} | true |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/125 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/125/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/125/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/125/events | https://github.com/UWB-Biocomputing/Graphitti/issues/125 | 695,381,891 | MDU6SXNzdWU2OTUzODE4OTE= | 125 | Result file in SummerOfBrain missing statistics | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423149,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/bug",
"name": "bug",
"color": "d73a4a",
"default": true,
"description": "Something isn't working"
}
] | closed | false | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.c... | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/milestones/6",
"html_url": "https://github.com/UWB-Biocomputing/Graphitti/milestone/6",
"labels_url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/milestones/6/labels",
"id": 5774074,
"node_id": "MDk6TWlsZXN0b25lNTc3NDA3NA==",
"number": 6,
"title": "Sprint 6",
"description": "",
"creator": {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
},
"open_issues": 1,
"closed_issues": 7,
"state": "closed",
"created_at": "2020-08-14T18:47:35",
"updated_at": "2021-04-02T00:25:48",
"due_on": "2020-09-25T07:00:00",
"closed_at": "2021-04-02T00:04:08"
} | [
"I'll also take a look.",
"This is also an opportunity to get rid of some of the stuff that we compute during simulation that we can compute afterwards."
] | 2020-09-07T20:41:33 | 2020-09-07T22:39:12 | 2020-09-07T22:39:12 | COLLABORATOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | When comparing the result files from the old BG repo and the SummerOfBrain repo, the output files are very close to being identical however the SummerOfBrain result file is missing radiiHistory and ratesHistory. Look into the XmlRecorder and see why these statistics aren't being recorded. | {
"login": "christopherdokeefe",
"id": 22608969,
"node_id": "MDQ6VXNlcjIyNjA4OTY5",
"avatar_url": "https://avatars.githubusercontent.com/u/22608969?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/christopherdokeefe",
"html_url": "https://github.com/christopherdokeefe",
"followers_url": "https://api.github.com/users/christopherdokeefe/followers",
"following_url": "https://api.github.com/users/christopherdokeefe/following{/other_user}",
"gists_url": "https://api.github.com/users/christopherdokeefe/gists{/gist_id}",
"starred_url": "https://api.github.com/users/christopherdokeefe/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/christopherdokeefe/subscriptions",
"organizations_url": "https://api.github.com/users/christopherdokeefe/orgs",
"repos_url": "https://api.github.com/users/christopherdokeefe/repos",
"events_url": "https://api.github.com/users/christopherdokeefe/events{/privacy}",
"received_events_url": "https://api.github.com/users/christopherdokeefe/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/125/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/125/timeline | null | completed | null | null | false |
https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/124 | https://api.github.com/repos/UWB-Biocomputing/Graphitti | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/124/labels{/name} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/124/comments | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/124/events | https://github.com/UWB-Biocomputing/Graphitti/issues/124 | 692,299,523 | MDU6SXNzdWU2OTIyOTk1MjM= | 124 | ParameterManager should produce more specific error messages | {
"login": "stiber",
"id": 1878411,
"node_id": "MDQ6VXNlcjE4Nzg0MTE=",
"avatar_url": "https://avatars.githubusercontent.com/u/1878411?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/stiber",
"html_url": "https://github.com/stiber",
"followers_url": "https://api.github.com/users/stiber/followers",
"following_url": "https://api.github.com/users/stiber/following{/other_user}",
"gists_url": "https://api.github.com/users/stiber/gists{/gist_id}",
"starred_url": "https://api.github.com/users/stiber/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/stiber/subscriptions",
"organizations_url": "https://api.github.com/users/stiber/orgs",
"repos_url": "https://api.github.com/users/stiber/repos",
"events_url": "https://api.github.com/users/stiber/events{/privacy}",
"received_events_url": "https://api.github.com/users/stiber/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | [
{
"id": 2144423149,
"node_id": "MDU6TGFiZWwyMTQ0NDIzMTQ5",
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/labels/bug",
"name": "bug",
"color": "d73a4a",
"default": true,
"description": "Something isn't working"
},
{
"id": 2144423158,
"node_id": "MDU6TGFiZWwyM... | closed | false | null | [] | null | [
"@jbrown725 Is this the same as the issue you fixed recently? Maybe #208 ?",
"Yeah, as of #212 if an xpath doesn't exist it will say `Failed loading simulation parameter for xpath <path>`."
] | 2020-09-03T20:13:31 | 2021-07-14T05:00:00 | 2021-07-14T05:00:00 | CONTRIBUTOR | null | {
"total": 0,
"completed": 0,
"percent_completed": 0
} | null | If the XPath doesn't exist, should indicate that, not just say it couldn't parse as type T. | {
"login": "jbrown725",
"id": 48458630,
"node_id": "MDQ6VXNlcjQ4NDU4NjMw",
"avatar_url": "https://avatars.githubusercontent.com/u/48458630?v=4",
"gravatar_id": "",
"url": "https://api.github.com/users/jbrown725",
"html_url": "https://github.com/jbrown725",
"followers_url": "https://api.github.com/users/jbrown725/followers",
"following_url": "https://api.github.com/users/jbrown725/following{/other_user}",
"gists_url": "https://api.github.com/users/jbrown725/gists{/gist_id}",
"starred_url": "https://api.github.com/users/jbrown725/starred{/owner}{/repo}",
"subscriptions_url": "https://api.github.com/users/jbrown725/subscriptions",
"organizations_url": "https://api.github.com/users/jbrown725/orgs",
"repos_url": "https://api.github.com/users/jbrown725/repos",
"events_url": "https://api.github.com/users/jbrown725/events{/privacy}",
"received_events_url": "https://api.github.com/users/jbrown725/received_events",
"type": "User",
"user_view_type": "public",
"site_admin": false
} | {
"url": "https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/124/reactions",
"total_count": 0,
"+1": 0,
"-1": 0,
"laugh": 0,
"hooray": 0,
"confused": 0,
"heart": 0,
"rocket": 0,
"eyes": 0
} | https://api.github.com/repos/UWB-Biocomputing/Graphitti/issues/124/timeline | null | completed | null | null | false |
Subsets and Splits
No community queries yet
The top public SQL queries from the community will appear here once available.