row_id string | dataset_id string | source_dataset string | source_file string | source_table string | source_sha string | row_index int64 | split string | subject_type string | entry_id int64 | sequence_id int64 | target_sequence_id int64 | source_sequence_length int64 | target_sequence_length int64 | protein_id int64 | protein_name string | organism string | isoform int64 | protein_ids string | protein_names string | organisms string | isoforms string | uniprot_accessions string | interpro_accessions string | ec_numbers string | megascale_ids string | other_references string | mutations string | substitutions string | deletions string | insertions string | mutation_count int64 | substitution_count int64 | deletion_count int64 | insertion_count int64 | first_position int64 | first_source_aa string | first_target_aa string | conservation float64 | feature_types string | pdb_ids string | afdb_ids string | structure_ids string | structure_methods string | structure_resolution_min float64 | residue_positions string | residue_chain_names string | residue_secondary_structures string | residue_in_pocket_any bool | residue_in_tunnel_any bool | residue_asa_mean float64 | residue_bfactor_mean float64 | experiment_id int64 | experiment_dataset string | ph float64 | measure string | method string | buffer string | buffer_conc string | exp_temperature float64 | ion string | ion_conc string | pdb_chain_mutation string | tm float64 | dtm float64 | dg float64 | dg_text string | ddg float64 | dh float64 | dcp float64 | dhvh float64 | cm float64 | m_value float64 | trypsin_ml float64 | chymotrypsin_ml float64 | stabilizing float64 | stabilizing_text string | domainome_fitness float64 | domainome_fitness_std float64 | domainome_ddg float64 | domainome_ddg_std float64 | reversibility string | state string | measurement_types string | measurement_datasets string | annotation_types string | publication_id string | publication_type string | publication_title string | publication_year int64 | publication_doi string | publication_pmid string | publication_journal string | publication_url string | publication_author_count int64 | publication_authors string | annotations_json string | measurements_json string | features_json string |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
fireprotdb:8471 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,471 | train | mutant | 925 | 158 | 1,047 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V32A | V32A | 1 | 1 | 0 | 0 | 32 | V | A | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 32 | A | E | false | false | 5.320099 | 15.692143 | 1,679 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | NaCl | 15 mM | 1FTG_A:V31A | 51.05 | -4.8 | null | null | 41.5 | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | TM|DTM|DH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"ION"},{"numValu... | [{"datasets":[],"id":6254,"numValue":51.05,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6255,"numValue":-4.8,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6256,"numValue":41.5,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":6257,"numValue":3.0,"references":[],"st... | [{"id":9412,"numValue":6.0,"position":32,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8472 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,472 | train | mutant | 925 | 158 | 1,047 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V32A | V32A | 1 | 1 | 0 | 0 | 32 | V | A | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 32 | A | E | false | false | 5.320099 | 15.692143 | 7,924 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | NaCl | 15 mM | 1FTG_A:V31A | null | null | null | 0.46 | null | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | DDG|STATE|REVERSIBILITY | khan_protherm_data_mapped.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":["khan_protherm_data_mapped.csv"],"id":27078,"numValue":0.46,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27079,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27080,"numValue":null,"references":[],"strValue":"yes","type":"REVERSIBILITY"}] | [{"id":9412,"numValue":6.0,"position":32,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||
fireprotdb:8473 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,473 | train | mutant | 925 | 158 | 1,047 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V32A | V32A | 1 | 1 | 0 | 0 | 32 | V | A | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 32 | A | E | false | false | 5.320099 | 15.692143 | 7,942 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | NaCl | 15 mM | 1FTG_A:V31A | null | null | null | 0.99 | null | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":[],"id":27132,"numValue":0.99,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27133,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27134,"numValue":null,"references":[],"strValue":"yes","type":"REVERSIBILITY"}] | [{"id":9412,"numValue":6.0,"position":32,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8474 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,474 | train | mutant | 925 | 158 | 1,047 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V32A | V32A | 1 | 1 | 0 | 0 | 32 | V | A | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 32 | A | E | false | false | 5.320099 | 15.692143 | 9,320 | ProTherm | 7 | CD | Urea | MOPS | 50 mM | 25 | NaCl | 15 mM | 1FTG_A:V31A | null | null | null | 2.39 | null | null | null | 1.31 | 2.02 | null | null | null | null | null | null | null | yes | DDG|M|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"... | [{"datasets":[],"id":31806,"numValue":2.39,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":31807,"numValue":2.02,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":31808,"numValue":1.31,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":31809,"numValue":null,"references":[],... | [{"id":9412,"numValue":6.0,"position":32,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8476 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,476 | train | mutant | 4,674 | 158 | 5,210 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | H35A | H35A | 1 | 1 | 0 | 0 | 35 | H | A | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 35 | A | E | false | false | 41.92379 | 9.665 | 10,982 | ProTherm | 8.5 | Fluorescence | Urea | Tris | 583 mM | 25 | 1FLV_A:H34A | null | null | null | 1.77 | null | null | null | 1.1 | null | null | null | null | null | null | null | null | Unknown | DDG|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 734 | ARTICLE | Energetics of a hydrogen bond (charged and neutral) and of a cation-pi interaction in apoflavodoxin. | 1,999 | 10.1006/jmbi.1999.2863 | 10388575 | J Mol Biol;290;319-30 | 3 | Sancho J|Romero A|Fern?ndez-Recio J | [{"numValue":8.5,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"Tris","type":"BUFFER"},{"numValue":null,"strValue":"583 mM","type":"BUFFE... | [{"datasets":[],"id":37857,"numValue":1.77,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":37858,"numValue":1.1,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":37859,"numValue":null,"references":[],"strValue":"Unknown","type":"REVERSIBILITY"}] | [{"id":9415,"numValue":3.0,"position":35,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||||
fireprotdb:8477 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,477 | train | mutant | 7,142 | 158 | 7,797 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | H35A|Y48F | H35A|Y48F | 2 | 2 | 0 | 0 | 35 | H | A | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 35|48 | A | E|L | false | false | 35.392263 | 9.493333 | 15,382 | ProTherm | 6 | Fluorescence | Urea | MES | 375 mM | 25 | 1FLV_A:H34A 1FLV_A:Y47F | null | null | null | 0.63 | null | null | null | 2.09 | null | null | null | null | null | null | null | null | Unknown | DDG|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 734 | ARTICLE | Energetics of a hydrogen bond (charged and neutral) and of a cation-pi interaction in apoflavodoxin. | 1,999 | 10.1006/jmbi.1999.2863 | 10388575 | J Mol Biol;290;319-30 | 3 | Sancho J|Romero A|Fern?ndez-Recio J | [{"numValue":6.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"MES","type":"BUFFER"},{"numValue":null,"strValue":"375 mM","type":"BUFFER... | [{"datasets":[],"id":56463,"numValue":0.63,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":56464,"numValue":2.09,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":56465,"numValue":null,"references":[],"strValue":"Unknown","type":"REVERSIBILITY"}] | [{"id":9415,"numValue":3.0,"position":35,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"},{"id":9428,"numValue":5.0,"position":48,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||||
fireprotdb:8478 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,478 | train | mutant | 7,142 | 158 | 7,797 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | H35A|Y48F | H35A|Y48F | 2 | 2 | 0 | 0 | 35 | H | A | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 35|48 | A | E|L | false | false | 35.392263 | 9.493333 | 15,384 | ProTherm | 8.5 | Fluorescence | Urea | Tris | 583 mM | 25 | 1FLV_A:H34A 1FLV_A:Y47F | null | null | null | 1.54 | null | null | null | 1.19 | null | null | null | null | null | null | null | null | Unknown | DDG|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 734 | ARTICLE | Energetics of a hydrogen bond (charged and neutral) and of a cation-pi interaction in apoflavodoxin. | 1,999 | 10.1006/jmbi.1999.2863 | 10388575 | J Mol Biol;290;319-30 | 3 | Sancho J|Romero A|Fern?ndez-Recio J | [{"numValue":8.5,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"Tris","type":"BUFFER"},{"numValue":null,"strValue":"583 mM","type":"BUFFE... | [{"datasets":[],"id":56469,"numValue":1.54,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":56470,"numValue":1.19,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":56471,"numValue":null,"references":[],"strValue":"Unknown","type":"REVERSIBILITY"}] | [{"id":9415,"numValue":3.0,"position":35,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"},{"id":9428,"numValue":5.0,"position":48,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||||
fireprotdb:8479 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,479 | train | mutant | 917 | 158 | 1,039 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E41K | E41K | 1 | 1 | 0 | 0 | 41 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 41 | A | L | true | false | 115.76407 | 23.217778 | 1,633 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | 1FTG_A:E40K | 44.75 | 0.6 | null | null | null | null | 33.5 | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1FTG_A:E40K","type":"_PDB_CHA... | [{"datasets":[],"id":6024,"numValue":44.75,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6025,"numValue":0.6,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6026,"numValue":33.5,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":6027,"numValue":3.0,"references":[],"s... | [{"id":9421,"numValue":3.0,"position":41,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8480 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,480 | train | mutant | 917 | 158 | 1,039 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E41K | E41K | 1 | 1 | 0 | 0 | 41 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 41 | A | L | true | false | 115.76407 | 23.217778 | 1,641 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | 1FTG_A:E40K | 60.35 | 4.5 | null | null | null | null | 62.5 | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1FTG_A:E40K","type":"_PDB_CHA... | [{"datasets":[],"id":6064,"numValue":60.35,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6065,"numValue":4.5,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6066,"numValue":62.5,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":6067,"numValue":3.0,"references":[],"s... | [{"id":9421,"numValue":3.0,"position":41,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8481 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,481 | train | mutant | 917 | 158 | 1,039 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E41K | E41K | 1 | 1 | 0 | 0 | 41 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 41 | A | L | true | false | 115.76407 | 23.217778 | 1,649 | ProTherm | 7 | DSC | Thermal | MOPS | 50 mM | null | 1FTG_A:E40K | 43.35 | 4.5 | null | null | 32.7 | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DTM|DH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1FTG_A:E40K","type":"_PDB_CH... | [{"datasets":[],"id":6104,"numValue":43.35,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6105,"numValue":4.5,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6106,"numValue":32.7,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":6107,"numValue":3.0,"references":[],"str... | [{"id":9421,"numValue":3.0,"position":41,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8482 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,482 | train | mutant | 917 | 158 | 1,039 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E41K | E41K | 1 | 1 | 0 | 0 | 41 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 41 | A | L | true | false | 115.76407 | 23.217778 | 1,654 | ProTherm | 7 | DSC | Thermal | MOPS | 50 mM | null | 1FTG_A:E40K | 59.35 | 6.6 | null | null | 59.6 | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DTM|DH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1FTG_A:E40K","type":"_PDB_CH... | [{"datasets":[],"id":6129,"numValue":59.35,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6130,"numValue":6.6,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6131,"numValue":59.6,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":6132,"numValue":3.0,"references":[],"str... | [{"id":9421,"numValue":3.0,"position":41,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8483 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,483 | train | mutant | 917 | 158 | 1,039 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E41K | E41K | 1 | 1 | 0 | 0 | 41 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 41 | A | L | true | false | 115.76407 | 23.217778 | 1,986 | ProTherm | 7 | Fluorescence, CD | Thermal | Mops | 50 mM | null | NaCl | 0.5 M | 1FTG_A:E40K | 48.65 | 5.4 | null | null | null | null | 10.8 | null | null | null | null | null | null | null | null | null | Yes | TM|DTM|DHVH|REVERSIBILITY | AUTOMUTE_S1925.csv|EASE-MM_S1676.csv|I_Mutant2.0_S1948.csv|I_Mutant2.0_S2087.csv|iPTREE-STAB_S1859.csv|M47andM8_S1810.csv|M47andM8_S2760.csv|PON-TStab_dataset.csv|Saraboji_S1396.csv|SVM-WIN31_SVM-3D12_S1634.csv|SVM-WIN31_SVM-3D12_S1681.csv|STRUM_Q3421.csv | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Fluorescence, CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"I... | [{"datasets":["AUTOMUTE_S1925.csv","EASE-MM_S1676.csv","I_Mutant2.0_S1948.csv","I_Mutant2.0_S2087.csv","iPTREE-STAB_S1859.csv","M47andM8_S1810.csv","M47andM8_S2760.csv","PON-TStab_dataset.csv","Saraboji_S1396.csv","SVM-WIN31_SVM-3D12_S1634.csv","SVM-WIN31_SVM-3D12_S1681.csv"],"id":7386,"numValue":48.65,"references":[],... | [{"id":9421,"numValue":3.0,"position":41,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8484 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,484 | train | mutant | 917 | 158 | 1,039 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E41K | E41K | 1 | 1 | 0 | 0 | 41 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 41 | A | L | true | false | 115.76407 | 23.217778 | 7,881 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:E40K | null | null | null | 0.06 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | khan_protherm_data_mapped.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":["khan_protherm_data_mapped.csv"],"id":26949,"numValue":0.06,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":26950,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":26951,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9421,"numValue":3.0,"position":41,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8486 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,486 | train | mutant | 917 | 158 | 1,039 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E41K | E41K | 1 | 1 | 0 | 0 | 41 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 41 | A | L | true | false | 115.76407 | 23.217778 | 7,897 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:E40K | null | null | null | 1.22 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":[],"id":26997,"numValue":1.22,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":26998,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":26999,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9421,"numValue":3.0,"position":41,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8487 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,487 | train | mutant | 917 | 158 | 1,039 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E41K | E41K | 1 | 1 | 0 | 0 | 41 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 41 | A | L | true | false | 115.76407 | 23.217778 | 7,905 | ProTherm | 7 | DSC | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:E40K | null | null | null | 0.4 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"... | [{"datasets":[],"id":27021,"numValue":0.4,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27022,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27023,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9421,"numValue":3.0,"position":41,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8488 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,488 | train | mutant | 917 | 158 | 1,039 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E41K | E41K | 1 | 1 | 0 | 0 | 41 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 41 | A | L | true | false | 115.76407 | 23.217778 | 7,911 | ProTherm | 7 | DSC | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:E40K | null | null | null | 1.12 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"... | [{"datasets":[],"id":27039,"numValue":1.12,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27040,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27041,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9421,"numValue":3.0,"position":41,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8489 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,489 | train | mutant | 917 | 158 | 1,039 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E41K | E41K | 1 | 1 | 0 | 0 | 41 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 41 | A | L | true | false | 115.76407 | 23.217778 | 7,917 | ProTherm | 7 | DSC | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:E40K | null | null | null | 1.52 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"... | [{"datasets":[],"id":27057,"numValue":1.52,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27058,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27059,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9421,"numValue":3.0,"position":41,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8490 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,490 | train | mutant | 917 | 158 | 1,039 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E41K | E41K | 1 | 1 | 0 | 0 | 41 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 41 | A | L | true | false | 115.76407 | 23.217778 | 7,997 | ProTherm | 7 | Fluorescence, CD | Thermal | Mops | 50 mM | 43.4 | NaCl | 0.5 M | 1FTG_A:E40K | null | null | null | -0.17 | null | 0.34 | null | null | null | null | null | null | null | null | null | null | Yes | DCP|DDG|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":43.4,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence, CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":... | [{"datasets":[],"id":27294,"numValue":0.34,"references":[],"strValue":null,"type":"DCP"},{"datasets":[],"id":27295,"numValue":-0.17,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27296,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9421,"numValue":3.0,"position":41,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8491 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,491 | train | mutant | 917 | 158 | 1,039 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E41K | E41K | 1 | 1 | 0 | 0 | 41 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 41 | A | L | true | false | 115.76407 | 23.217778 | 8,482 | ProTherm | 7 | Fluorescence | Urea | Mops | 50 mM | 25.2 | NaCl | 0.5 M | 1FTG_A:E40K | null | null | null | -0.38 | null | null | null | 1.2 | null | null | null | null | null | null | null | null | Yes | DDG|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.2,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER... | [{"datasets":[],"id":28851,"numValue":-0.38,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":28852,"numValue":1.2,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":28853,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9421,"numValue":3.0,"position":41,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8493 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,493 | train | mutant | 926 | 158 | 1,048 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | D44A | D44A | 1 | 1 | 0 | 0 | 44 | D | A | 2 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 44 | A | G | false | false | 41.607856 | 12.415625 | 1,662 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | NaCl | 15 mM | 1FTG_A:D43A | 44.55 | 0.4 | null | null | null | null | 34.1 | null | null | null | null | null | null | null | null | null | yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"ION"},{"numValu... | [{"datasets":[],"id":6169,"numValue":44.55,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6170,"numValue":0.4,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6171,"numValue":34.1,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":6172,"numValue":3.0,"references":[],"s... | [{"id":9424,"numValue":2.0,"position":44,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8494 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,494 | train | mutant | 926 | 158 | 1,048 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | D44A | D44A | 1 | 1 | 0 | 0 | 44 | D | A | 2 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 44 | A | G | false | false | 41.607856 | 12.415625 | 1,680 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | NaCl | 15 mM | 1FTG_A:D43A | 56.45 | 0.6 | null | null | 49.5 | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | TM|DTM|DH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"ION"},{"numValu... | [{"datasets":[],"id":6259,"numValue":56.45,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6260,"numValue":0.6,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6261,"numValue":49.5,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":6262,"numValue":3.0,"references":[],"str... | [{"id":9424,"numValue":2.0,"position":44,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8495 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,495 | train | mutant | 926 | 158 | 1,048 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | D44A | D44A | 1 | 1 | 0 | 0 | 44 | D | A | 2 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 44 | A | G | false | false | 41.607856 | 12.415625 | 7,925 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | NaCl | 15 mM | 1FTG_A:D43A | null | null | null | -0.04 | null | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | DDG|STATE|REVERSIBILITY | potapov_with_uniprot_mapping.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":["potapov_with_uniprot_mapping.csv"],"id":27081,"numValue":-0.04,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27082,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27083,"numValue":null,"references":[],"strValue":"yes","type":"REVERSIBILITY"}] | [{"id":9424,"numValue":2.0,"position":44,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||
fireprotdb:8496 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,496 | train | mutant | 926 | 158 | 1,048 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | D44A | D44A | 1 | 1 | 0 | 0 | 44 | D | A | 2 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 44 | A | G | false | false | 41.607856 | 12.415625 | 7,943 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | NaCl | 15 mM | 1FTG_A:D43A | null | null | null | 0.03 | null | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | DDG|STATE|REVERSIBILITY | khan_protherm_data_mapped.csv|potapov_with_uniprot_mapping.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":["khan_protherm_data_mapped.csv","potapov_with_uniprot_mapping.csv"],"id":27135,"numValue":0.03,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27136,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27137,"numValue":null,"references":[],"strValue":"yes","... | [{"id":9424,"numValue":2.0,"position":44,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||
fireprotdb:8497 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,497 | train | mutant | 926 | 158 | 1,048 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | D44A | D44A | 1 | 1 | 0 | 0 | 44 | D | A | 2 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 44 | A | G | false | false | 41.607856 | 12.415625 | 9,321 | ProTherm | 7 | CD | Urea | MOPS | 50 mM | 25 | NaCl | 15 mM | 1FTG_A:D43A | null | null | null | -0.09 | null | null | null | 2.11 | 2.43 | null | null | null | null | null | null | null | yes | DDG|M|CM|REVERSIBILITY | potapov_with_uniprot_mapping.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"... | [{"datasets":["potapov_with_uniprot_mapping.csv"],"id":31810,"numValue":-0.09,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":31811,"numValue":2.43,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":31812,"numValue":2.11,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":318... | [{"id":9424,"numValue":2.0,"position":44,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8498 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,498 | train | mutant | 4,673 | 158 | 5,209 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | Y48F | Y48F | 1 | 1 | 0 | 0 | 48 | Y | F | 5 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 48 | A | L | false | false | 28.860735 | 9.321667 | 10,978 | ProTherm | 6 | Fluorescence | Urea | MES | 375 mM | 25 | 1FLV_A:Y47F | null | null | null | 0.59 | null | null | null | 2.11 | null | null | null | null | null | null | null | null | Unknown | DDG|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 734 | ARTICLE | Energetics of a hydrogen bond (charged and neutral) and of a cation-pi interaction in apoflavodoxin. | 1,999 | 10.1006/jmbi.1999.2863 | 10388575 | J Mol Biol;290;319-30 | 3 | Sancho J|Romero A|Fern?ndez-Recio J | [{"numValue":6.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"MES","type":"BUFFER"},{"numValue":null,"strValue":"375 mM","type":"BUFFER... | [{"datasets":[],"id":37845,"numValue":0.59,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":37846,"numValue":2.11,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":37847,"numValue":null,"references":[],"strValue":"Unknown","type":"REVERSIBILITY"}] | [{"id":9428,"numValue":5.0,"position":48,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||||
fireprotdb:8499 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,499 | train | mutant | 4,673 | 158 | 5,209 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | Y48F | Y48F | 1 | 1 | 0 | 0 | 48 | Y | F | 5 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 48 | A | L | false | false | 28.860735 | 9.321667 | 10,981 | ProTherm | 8.5 | Fluorescence | Urea | Tris | 583 mM | 25 | 1FLV_A:Y47F | null | null | null | 1.07 | null | null | null | 1.37 | null | null | null | null | null | null | null | null | Unknown | DDG|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 734 | ARTICLE | Energetics of a hydrogen bond (charged and neutral) and of a cation-pi interaction in apoflavodoxin. | 1,999 | 10.1006/jmbi.1999.2863 | 10388575 | J Mol Biol;290;319-30 | 3 | Sancho J|Romero A|Fern?ndez-Recio J | [{"numValue":8.5,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"Tris","type":"BUFFER"},{"numValue":null,"strValue":"583 mM","type":"BUFFE... | [{"datasets":[],"id":37854,"numValue":1.07,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":37855,"numValue":1.37,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":37856,"numValue":null,"references":[],"strValue":"Unknown","type":"REVERSIBILITY"}] | [{"id":9428,"numValue":5.0,"position":48,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||||
fireprotdb:8500 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,500 | train | mutant | 1,108 | 158 | 1,249 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | L51A | L51A | 1 | 1 | 0 | 0 | 51 | L | A | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 51 | A | E | true | false | 0.067185 | 6.398125 | 1,987 | ProTherm | 7 | Fluorescence, CD | Thermal | Mops | 50 mM | null | NaCl | 0.5 M | 1FTG_A:L50A | 43.85 | 0.6 | null | null | null | null | 12.6 | null | null | null | null | null | null | null | null | null | Yes | TM|DTM|DHVH|REVERSIBILITY | AUTOMUTE_S1925.csv|EASE-MM_S1676.csv|I_Mutant2.0_S1948.csv|I_Mutant2.0_S2087.csv|iPTREE-STAB_S1859.csv|M47andM8_S2760.csv|Saraboji_S1396.csv|STRUM_Q3421.csv|SVM-WIN31_SVM-3D12_S1634.csv|SVM-WIN31_SVM-3D12_S1681.csv | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Fluorescence, CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"I... | [{"datasets":["AUTOMUTE_S1925.csv","EASE-MM_S1676.csv","I_Mutant2.0_S1948.csv","I_Mutant2.0_S2087.csv","iPTREE-STAB_S1859.csv","M47andM8_S2760.csv","Saraboji_S1396.csv","STRUM_Q3421.csv","SVM-WIN31_SVM-3D12_S1634.csv","SVM-WIN31_SVM-3D12_S1681.csv"],"id":7390,"numValue":43.85,"references":[],"strValue":null,"type":"TM"... | [{"id":9431,"numValue":6.0,"position":51,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8501 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,501 | train | mutant | 1,108 | 158 | 1,249 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | L51A | L51A | 1 | 1 | 0 | 0 | 51 | L | A | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 51 | A | E | true | false | 0.067185 | 6.398125 | 7,998 | ProTherm | 7 | Fluorescence, CD | Thermal | Mops | 50 mM | 43.4 | NaCl | 0.5 M | 1FTG_A:L50A | null | null | null | -0.02 | null | 0.34 | null | null | null | null | null | null | null | null | null | null | Yes | DCP|DDG|REVERSIBILITY | khan_protherm_data_mapped.csv|potapov_with_uniprot_mapping.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":43.4,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence, CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":... | [{"datasets":[],"id":27297,"numValue":0.34,"references":[],"strValue":null,"type":"DCP"},{"datasets":["khan_protherm_data_mapped.csv","potapov_with_uniprot_mapping.csv"],"id":27298,"numValue":-0.02,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27299,"numValue":null,"references":[],"strValue":"Yes","... | [{"id":9431,"numValue":6.0,"position":51,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8502 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,502 | train | mutant | 1,108 | 158 | 1,249 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | L51A | L51A | 1 | 1 | 0 | 0 | 51 | L | A | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 51 | A | E | true | false | 0.067185 | 6.398125 | 8,483 | ProTherm | 7 | Fluorescence | Urea | Mops | 50 mM | 25.2 | NaCl | 0.5 M | 1FTG_A:L50A | null | null | null | -0.05 | null | null | null | 0.72 | null | null | null | null | null | null | null | null | Yes | DDG|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.2,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER... | [{"datasets":[],"id":28854,"numValue":-0.05,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":28855,"numValue":0.72,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":28856,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9431,"numValue":6.0,"position":51,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8504 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,504 | train | mutant | 927 | 158 | 1,049 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | I52V | I52V | 1 | 1 | 0 | 0 | 52 | I | V | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 52 | A | E | false | false | 0 | 4.70875 | 1,681 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | NaCl | 15 mM | 1FTG_A:I51V | 51.15 | -4.7 | null | null | 38.8 | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | TM|DTM|DH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"ION"},{"numValu... | [{"datasets":[],"id":6264,"numValue":51.15,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6265,"numValue":-4.7,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6266,"numValue":38.8,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":6267,"numValue":3.0,"references":[],"st... | [{"id":9432,"numValue":8.0,"position":52,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8505 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,505 | train | mutant | 927 | 158 | 1,049 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | I52V | I52V | 1 | 1 | 0 | 0 | 52 | I | V | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 52 | A | E | false | false | 0 | 4.70875 | 7,926 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | NaCl | 15 mM | 1FTG_A:I51V | null | null | null | 0.41 | null | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | DDG|STATE|REVERSIBILITY | khan_protherm_data_mapped.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":["khan_protherm_data_mapped.csv"],"id":27084,"numValue":0.41,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27085,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27086,"numValue":null,"references":[],"strValue":"yes","type":"REVERSIBILITY"}] | [{"id":9432,"numValue":8.0,"position":52,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||
fireprotdb:8506 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,506 | train | mutant | 927 | 158 | 1,049 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | I52V | I52V | 1 | 1 | 0 | 0 | 52 | I | V | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 52 | A | E | false | false | 0 | 4.70875 | 7,944 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | NaCl | 15 mM | 1FTG_A:I51V | null | null | null | 1.04 | null | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":[],"id":27138,"numValue":1.04,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27139,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27140,"numValue":null,"references":[],"strValue":"yes","type":"REVERSIBILITY"}] | [{"id":9432,"numValue":8.0,"position":52,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8507 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,507 | train | mutant | 927 | 158 | 1,049 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | I52V | I52V | 1 | 1 | 0 | 0 | 52 | I | V | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 52 | A | E | false | false | 0 | 4.70875 | 9,322 | ProTherm | 7 | CD | Urea | MOPS | 50 mM | 25 | NaCl | 15 mM | 1FTG_A:I51V | null | null | null | 1.98 | null | null | null | 1.27 | 2.42 | null | null | null | null | null | null | null | yes | DDG|M|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"... | [{"datasets":[],"id":31814,"numValue":1.98,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":31815,"numValue":2.42,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":31816,"numValue":1.27,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":31817,"numValue":null,"references":[],... | [{"id":9432,"numValue":8.0,"position":52,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8508 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,508 | train | mutant | 928 | 158 | 1,050 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | I53V | I53V | 1 | 1 | 0 | 0 | 53 | I | V | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 53 | A | E | true | false | 0.201556 | 4.343125 | 1,664 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | NaCl | 15 mM | 1FTG_A:I52V | 42.75 | -1.4 | null | null | null | null | 39.8 | null | null | null | null | null | null | null | null | null | yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"ION"},{"numValu... | [{"datasets":[],"id":6179,"numValue":42.75,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6180,"numValue":-1.4,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6181,"numValue":39.8,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":6182,"numValue":3.0,"references":[],"... | [{"id":9433,"numValue":6.0,"position":53,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8509 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,509 | train | mutant | 928 | 158 | 1,050 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | I53V | I53V | 1 | 1 | 0 | 0 | 53 | I | V | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 53 | A | E | true | false | 0.201556 | 4.343125 | 1,682 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | NaCl | 15 mM | 1FTG_A:I52V | 51.75 | -4.1 | null | null | 54.5 | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | TM|DTM|DH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"ION"},{"numValu... | [{"datasets":[],"id":6269,"numValue":51.75,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6270,"numValue":-4.1,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6271,"numValue":54.5,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":6272,"numValue":3.0,"references":[],"st... | [{"id":9433,"numValue":6.0,"position":53,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8510 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,510 | train | mutant | 928 | 158 | 1,050 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | I53V | I53V | 1 | 1 | 0 | 0 | 53 | I | V | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 53 | A | E | true | false | 0.201556 | 4.343125 | 7,927 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | NaCl | 15 mM | 1FTG_A:I52V | null | null | null | 0.18 | null | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | DDG|STATE|REVERSIBILITY | khan_protherm_data_mapped.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":["khan_protherm_data_mapped.csv"],"id":27087,"numValue":0.18,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27088,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27089,"numValue":null,"references":[],"strValue":"yes","type":"REVERSIBILITY"}] | [{"id":9433,"numValue":6.0,"position":53,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||
fireprotdb:8511 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,511 | train | mutant | 928 | 158 | 1,050 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | I53V | I53V | 1 | 1 | 0 | 0 | 53 | I | V | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 53 | A | E | true | false | 0.201556 | 4.343125 | 7,945 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | NaCl | 15 mM | 1FTG_A:I52V | null | null | null | 0.6 | null | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":[],"id":27141,"numValue":0.6,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27142,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27143,"numValue":null,"references":[],"strValue":"yes","type":"REVERSIBILITY"}] | [{"id":9433,"numValue":6.0,"position":53,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8512 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,512 | train | mutant | 928 | 158 | 1,050 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | I53V | I53V | 1 | 1 | 0 | 0 | 53 | I | V | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 53 | A | E | true | false | 0.201556 | 4.343125 | 9,323 | ProTherm | 7 | CD | Urea | MOPS | 50 mM | 25 | NaCl | 15 mM | 1FTG_A:I52V | null | null | null | 1.38 | null | null | null | 1.45 | 2.52 | null | null | null | null | null | null | null | yes | DDG|M|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"... | [{"datasets":[],"id":31818,"numValue":1.38,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":31819,"numValue":2.52,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":31820,"numValue":1.45,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":31821,"numValue":null,"references":[],... | [{"id":9433,"numValue":6.0,"position":53,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8513 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,513 | train | mutant | 918 | 158 | 1,040 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E62K | E62K | 1 | 1 | 0 | 0 | 62 | E | K | 7 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 62 | A | S|E | true | true | 93.121361 | 28.090556 | 1,634 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | 1FTG_A:E61K | 47.75 | 3.6 | null | null | null | null | 41 | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1FTG_A:E61K","type":"_PDB_CHA... | [{"datasets":[],"id":6029,"numValue":47.75,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6030,"numValue":3.6,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6031,"numValue":41.0,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":6032,"numValue":3.0,"references":[],"s... | [{"id":9442,"numValue":7.0,"position":62,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8514 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,514 | train | mutant | 918 | 158 | 1,040 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E62K | E62K | 1 | 1 | 0 | 0 | 62 | E | K | 7 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 62 | A | S|E | true | true | 93.121361 | 28.090556 | 1,642 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | 1FTG_A:E61K | 58.55 | 2.7 | null | null | null | null | 38 | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1FTG_A:E61K","type":"_PDB_CHA... | [{"datasets":[],"id":6069,"numValue":58.55,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6070,"numValue":2.7,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6071,"numValue":38.0,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":6072,"numValue":3.0,"references":[],"s... | [{"id":9442,"numValue":7.0,"position":62,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8517 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,517 | train | mutant | 918 | 158 | 1,040 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E62K | E62K | 1 | 1 | 0 | 0 | 62 | E | K | 7 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 62 | A | S|E | true | true | 93.121361 | 28.090556 | 7,898 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:E61K | null | null | null | 0.24 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | potapov_with_uniprot_mapping.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":["potapov_with_uniprot_mapping.csv"],"id":27000,"numValue":0.24,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27001,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27002,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9442,"numValue":7.0,"position":62,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8519 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,519 | train | mutant | 919 | 158 | 1,041 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | D66K | D66K | 1 | 1 | 0 | 0 | 66 | D | K | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 66 | A | H | true | false | 45.849348 | 13.670625 | 1,635 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | 1FTG_A:D65K | 42.05 | -2.1 | null | null | null | null | 30.4 | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1FTG_A:D65K","type":"_PDB_CHA... | [{"datasets":[],"id":6034,"numValue":42.05,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6035,"numValue":-2.1,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6036,"numValue":30.4,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":6037,"numValue":3.0,"references":[],"... | [{"id":9446,"numValue":8.0,"position":66,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8520 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,520 | train | mutant | 919 | 158 | 1,041 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | D66K | D66K | 1 | 1 | 0 | 0 | 66 | D | K | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 66 | A | H | true | false | 45.849348 | 13.670625 | 1,643 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | 1FTG_A:D65K | 56.05 | 0.2 | null | null | null | null | 54.9 | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1FTG_A:D65K","type":"_PDB_CHA... | [{"datasets":[],"id":6074,"numValue":56.05,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6075,"numValue":0.2,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6076,"numValue":54.9,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":6077,"numValue":3.0,"references":[],"s... | [{"id":9446,"numValue":8.0,"position":66,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8521 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,521 | train | mutant | 919 | 158 | 1,041 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | D66K | D66K | 1 | 1 | 0 | 0 | 66 | D | K | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 66 | A | H | true | false | 45.849348 | 13.670625 | 7,883 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:D65K | null | null | null | -0.2 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":[],"id":26955,"numValue":-0.2,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":26956,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":26957,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9446,"numValue":8.0,"position":66,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8522 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,522 | train | mutant | 919 | 158 | 1,041 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | D66K | D66K | 1 | 1 | 0 | 0 | 66 | D | K | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 66 | A | H | true | false | 45.849348 | 13.670625 | 7,891 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:D65K | null | null | null | 0.11 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":[],"id":26979,"numValue":0.11,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":26980,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":26981,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9446,"numValue":8.0,"position":66,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8523 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,523 | train | mutant | 919 | 158 | 1,041 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | D66K | D66K | 1 | 1 | 0 | 0 | 66 | D | K | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 66 | A | H | true | false | 45.849348 | 13.670625 | 7,899 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:D65K | null | null | null | -0.09 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | khan_protherm_data_mapped.csv|potapov_with_uniprot_mapping.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":["khan_protherm_data_mapped.csv","potapov_with_uniprot_mapping.csv"],"id":27003,"numValue":-0.09,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27004,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27005,"numValue":null,"references":[],"strValue":"Yes",... | [{"id":9446,"numValue":8.0,"position":66,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8524 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,524 | train | mutant | 919 | 158 | 1,041 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | D66K | D66K | 1 | 1 | 0 | 0 | 66 | D | K | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 66 | A | H | true | false | 45.849348 | 13.670625 | 9,306 | ProTherm | 7 | Fluorescence | Urea | MOPS | 50 mM | 25 | 1FTG_A:D65K | null | null | null | 0.26 | null | null | null | 2.09 | 2.29 | null | null | null | null | null | null | null | Yes | DDG|M|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER... | [{"datasets":[],"id":31750,"numValue":0.26,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":31751,"numValue":2.29,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":31752,"numValue":2.09,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":31753,"numValue":null,"references":[],... | [{"id":9446,"numValue":8.0,"position":66,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||||
fireprotdb:8525 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,525 | train | mutant | 1,109 | 158 | 1,250 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | G69A | G69A | 1 | 1 | 0 | 0 | 69 | G | A | 5 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 69 | A | H | true | false | 49.17949 | 20.39875 | 1,988 | ProTherm | 7 | Fluorescence, CD | Thermal | Mops | 50 mM | null | NaCl | 0.5 M | 1FTG_A:G68A | 49.95 | 6.7 | null | null | null | null | 19.5 | null | null | null | null | null | null | null | null | null | Yes | TM|DTM|DHVH|REVERSIBILITY | AUTOMUTE_S1925.csv|EASE-MM_S1676.csv|I_Mutant2.0_S1948.csv|I_Mutant2.0_S2087.csv|iPTREE-STAB_S1859.csv|M47andM8_S2760.csv|Saraboji_S1396.csv|STRUM_Q3421.csv|SVM-WIN31_SVM-3D12_S1634.csv|SVM-WIN31_SVM-3D12_S1681.csv|M47andM8_S1810.csv|PoPMuSiC-2.0_S2648.csv | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Fluorescence, CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"I... | [{"datasets":["AUTOMUTE_S1925.csv","EASE-MM_S1676.csv","I_Mutant2.0_S1948.csv","I_Mutant2.0_S2087.csv","iPTREE-STAB_S1859.csv","M47andM8_S2760.csv","Saraboji_S1396.csv","STRUM_Q3421.csv","SVM-WIN31_SVM-3D12_S1634.csv","SVM-WIN31_SVM-3D12_S1681.csv"],"id":7394,"numValue":49.95,"references":[],"strValue":null,"type":"TM"... | [{"id":9449,"numValue":5.0,"position":69,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8526 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,526 | train | mutant | 1,109 | 158 | 1,250 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | G69A | G69A | 1 | 1 | 0 | 0 | 69 | G | A | 5 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 69 | A | H | true | false | 49.17949 | 20.39875 | 7,999 | ProTherm | 7 | Fluorescence, CD | Thermal | Mops | 50 mM | 43.4 | NaCl | 0.5 M | 1FTG_A:G68A | null | null | null | -0.38 | null | 0.34 | null | null | null | null | null | null | null | null | null | null | Yes | DCP|DDG|REVERSIBILITY | khan_protherm_data_mapped.csv|potapov_with_uniprot_mapping.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":43.4,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence, CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":... | [{"datasets":[],"id":27300,"numValue":0.34,"references":[],"strValue":null,"type":"DCP"},{"datasets":["khan_protherm_data_mapped.csv","potapov_with_uniprot_mapping.csv"],"id":27301,"numValue":-0.38,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27302,"numValue":null,"references":[],"strValue":"Yes","... | [{"id":9449,"numValue":5.0,"position":69,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8527 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,527 | train | mutant | 1,109 | 158 | 1,250 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | G69A | G69A | 1 | 1 | 0 | 0 | 69 | G | A | 5 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 69 | A | H | true | false | 49.17949 | 20.39875 | 8,484 | ProTherm | 7 | Fluorescence | Urea | Mops | 50 mM | 25.2 | NaCl | 0.5 M | 1FTG_A:G68A | null | null | null | -0.45 | null | null | null | 1.3 | null | null | null | null | null | null | null | null | Yes | DDG|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.2,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER... | [{"datasets":[],"id":28857,"numValue":-0.45,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":28858,"numValue":1.3,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":28859,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9449,"numValue":5.0,"position":69,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8528 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,528 | train | mutant | 929 | 158 | 1,051 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | S72A | S72A | 1 | 1 | 0 | 0 | 72 | S | A | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 72 | A | T | false | false | 84.907801 | 20.223333 | 1,665 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | NaCl | 15 mM | 1FTG_A:S71A | 43.15 | -1 | null | null | null | null | 34.5 | null | null | null | null | null | null | null | null | null | yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"ION"},{"numValu... | [{"datasets":[],"id":6184,"numValue":43.15,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6185,"numValue":-1.0,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6186,"numValue":34.5,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":6187,"numValue":3.0,"references":[],"... | [{"id":9452,"numValue":3.0,"position":72,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8529 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,529 | train | mutant | 929 | 158 | 1,051 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | S72A | S72A | 1 | 1 | 0 | 0 | 72 | S | A | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 72 | A | T | false | false | 84.907801 | 20.223333 | 1,683 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | NaCl | 15 mM | 1FTG_A:S71A | 56.15 | 0.3 | null | null | 55 | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | TM|DTM|DH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"ION"},{"numValu... | [{"datasets":[],"id":6274,"numValue":56.15,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6275,"numValue":0.3,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6276,"numValue":55.0,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":6277,"numValue":3.0,"references":[],"str... | [{"id":9452,"numValue":3.0,"position":72,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8530 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,530 | train | mutant | 929 | 158 | 1,051 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | S72A | S72A | 1 | 1 | 0 | 0 | 72 | S | A | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 72 | A | T | false | false | 84.907801 | 20.223333 | 7,928 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | NaCl | 15 mM | 1FTG_A:S71A | null | null | null | 0.11 | null | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | DDG|STATE|REVERSIBILITY | khan_protherm_data_mapped.csv|potapov_with_uniprot_mapping.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":["khan_protherm_data_mapped.csv","potapov_with_uniprot_mapping.csv"],"id":27090,"numValue":0.11,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27091,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27092,"numValue":null,"references":[],"strValue":"yes","... | [{"id":9452,"numValue":3.0,"position":72,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||
fireprotdb:8532 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,532 | train | mutant | 929 | 158 | 1,051 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | S72A | S72A | 1 | 1 | 0 | 0 | 72 | S | A | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 72 | A | T | false | false | 84.907801 | 20.223333 | 9,324 | ProTherm | 7 | CD | Urea | MOPS | 50 mM | 25 | NaCl | 15 mM | 1FTG_A:S71A | null | null | null | 0.65 | null | null | null | 1.77 | 2.49 | null | null | null | null | null | null | null | yes | DDG|M|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"... | [{"datasets":[],"id":31822,"numValue":0.65,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":31823,"numValue":2.49,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":31824,"numValue":1.77,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":31825,"numValue":null,"references":[],... | [{"id":9452,"numValue":3.0,"position":72,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8533 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,533 | train | mutant | 920 | 158 | 1,042 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E73K | E73K | 1 | 1 | 0 | 0 | 73 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 73 | A | T | true | false | 79.981614 | 20.906666 | 1,636 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | 1FTG_A:E72K | 45.35 | 1.2 | null | null | null | null | 33.2 | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1FTG_A:E72K","type":"_PDB_CHA... | [{"datasets":[],"id":6039,"numValue":45.35,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6040,"numValue":1.2,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6041,"numValue":33.2,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":6042,"numValue":3.0,"references":[],"s... | [{"id":9453,"numValue":3.0,"position":73,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8534 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,534 | train | mutant | 920 | 158 | 1,042 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E73K | E73K | 1 | 1 | 0 | 0 | 73 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 73 | A | T | true | false | 79.981614 | 20.906666 | 1,644 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | 1FTG_A:E72K | 63.05 | 7.2 | null | null | null | null | 57.8 | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1FTG_A:E72K","type":"_PDB_CHA... | [{"datasets":[],"id":6079,"numValue":63.05,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6080,"numValue":7.2,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6081,"numValue":57.8,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":6082,"numValue":3.0,"references":[],"s... | [{"id":9453,"numValue":3.0,"position":73,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8535 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,535 | train | mutant | 920 | 158 | 1,042 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E73K | E73K | 1 | 1 | 0 | 0 | 73 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 73 | A | T | true | false | 79.981614 | 20.906666 | 1,650 | ProTherm | 7 | DSC | Thermal | MOPS | 50 mM | null | 1FTG_A:E72K | 39.65 | 0.8 | null | null | 27.2 | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DTM|DH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1FTG_A:E72K","type":"_PDB_CH... | [{"datasets":[],"id":6109,"numValue":39.65,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6110,"numValue":0.8,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6111,"numValue":27.2,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":6112,"numValue":3.0,"references":[],"str... | [{"id":9453,"numValue":3.0,"position":73,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8536 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,536 | train | mutant | 920 | 158 | 1,042 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E73K | E73K | 1 | 1 | 0 | 0 | 73 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 73 | A | T | true | false | 79.981614 | 20.906666 | 1,655 | ProTherm | 7 | DSC | Thermal | MOPS | 50 mM | null | 1FTG_A:E72K | 60.45 | 7.6 | null | null | 68.4 | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DTM|DH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1FTG_A:E72K","type":"_PDB_CH... | [{"datasets":[],"id":6134,"numValue":60.45,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6135,"numValue":7.6,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6136,"numValue":68.4,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":6137,"numValue":3.0,"references":[],"str... | [{"id":9453,"numValue":3.0,"position":73,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8537 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,537 | train | mutant | 920 | 158 | 1,042 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E73K | E73K | 1 | 1 | 0 | 0 | 73 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 73 | A | T | true | false | 79.981614 | 20.906666 | 1,989 | ProTherm | 7 | Fluorescence, CD | Thermal | Mops | 50 mM | null | NaCl | 0.5 M | 1FTG_A:E72K | 49.45 | 6.2 | null | null | null | null | 18.4 | null | null | null | null | null | null | null | null | null | Yes | TM|DTM|DHVH|REVERSIBILITY | AUTOMUTE_S1925.csv|EASE-MM_S1676.csv|I_Mutant2.0_S1948.csv|I_Mutant2.0_S2087.csv|iPTREE-STAB_S1859.csv|M47andM8_S1810.csv|M47andM8_S2760.csv|PoPMuSiC-2.0_S2648.csv|Saraboji_S1396.csv|STRUM_Q3421.csv|SVM-WIN31_SVM-3D12_S1634.csv|SVM-WIN31_SVM-3D12_S1681.csv | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Fluorescence, CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"I... | [{"datasets":["AUTOMUTE_S1925.csv","EASE-MM_S1676.csv","I_Mutant2.0_S1948.csv","I_Mutant2.0_S2087.csv","iPTREE-STAB_S1859.csv","M47andM8_S1810.csv","M47andM8_S2760.csv","PoPMuSiC-2.0_S2648.csv","Saraboji_S1396.csv","STRUM_Q3421.csv","SVM-WIN31_SVM-3D12_S1634.csv","SVM-WIN31_SVM-3D12_S1681.csv"],"id":7398,"numValue":49.... | [{"id":9453,"numValue":3.0,"position":73,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8538 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,538 | train | mutant | 920 | 158 | 1,042 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E73K | E73K | 1 | 1 | 0 | 0 | 73 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 73 | A | T | true | false | 79.981614 | 20.906666 | 7,884 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:E72K | null | null | null | 0.13 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":[],"id":26958,"numValue":0.13,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":26959,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":26960,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9453,"numValue":3.0,"position":73,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8539 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,539 | train | mutant | 920 | 158 | 1,042 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E73K | E73K | 1 | 1 | 0 | 0 | 73 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 73 | A | T | true | false | 79.981614 | 20.906666 | 7,892 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:E72K | null | null | null | 1.38 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":[],"id":26982,"numValue":1.38,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":26983,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":26984,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9453,"numValue":3.0,"position":73,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8540 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,540 | train | mutant | 920 | 158 | 1,042 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E73K | E73K | 1 | 1 | 0 | 0 | 73 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 73 | A | T | true | false | 79.981614 | 20.906666 | 7,900 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:E72K | null | null | null | 1.5 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":[],"id":27006,"numValue":1.5,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27007,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27008,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9453,"numValue":3.0,"position":73,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8541 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,541 | train | mutant | 920 | 158 | 1,042 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E73K | E73K | 1 | 1 | 0 | 0 | 73 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 73 | A | T | true | false | 79.981614 | 20.906666 | 7,906 | ProTherm | 7 | DSC | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:E72K | null | null | null | 0.07 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | khan_protherm_data_mapped.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"... | [{"datasets":["khan_protherm_data_mapped.csv"],"id":27024,"numValue":0.07,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27025,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27026,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9453,"numValue":3.0,"position":73,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8542 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,542 | train | mutant | 920 | 158 | 1,042 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E73K | E73K | 1 | 1 | 0 | 0 | 73 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 73 | A | T | true | false | 79.981614 | 20.906666 | 7,912 | ProTherm | 7 | DSC | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:E72K | null | null | null | 1.4 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"... | [{"datasets":[],"id":27042,"numValue":1.4,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27043,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27044,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9453,"numValue":3.0,"position":73,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8543 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,543 | train | mutant | 920 | 158 | 1,042 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E73K | E73K | 1 | 1 | 0 | 0 | 73 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 73 | A | T | true | false | 79.981614 | 20.906666 | 7,918 | ProTherm | 7 | DSC | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:E72K | null | null | null | 1.47 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"... | [{"datasets":[],"id":27060,"numValue":1.47,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27061,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27062,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9453,"numValue":3.0,"position":73,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8544 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,544 | train | mutant | 920 | 158 | 1,042 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E73K | E73K | 1 | 1 | 0 | 0 | 73 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 73 | A | T | true | false | 79.981614 | 20.906666 | 8,000 | ProTherm | 7 | Fluorescence, CD | Thermal | Mops | 50 mM | 43.4 | NaCl | 0.5 M | 1FTG_A:E72K | null | null | null | -0.33 | null | 0.34 | null | null | null | null | null | null | null | null | null | null | Yes | DCP|DDG|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":43.4,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence, CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":... | [{"datasets":[],"id":27303,"numValue":0.34,"references":[],"strValue":null,"type":"DCP"},{"datasets":[],"id":27304,"numValue":-0.33,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27305,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9453,"numValue":3.0,"position":73,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8546 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,546 | train | mutant | 920 | 158 | 1,042 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E73K | E73K | 1 | 1 | 0 | 0 | 73 | E | K | 3 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 73 | A | T | true | false | 79.981614 | 20.906666 | 9,307 | ProTherm | 7 | Fluorescence | Urea | MOPS | 50 mM | 25 | 1FTG_A:E72K | null | null | null | -1.28 | null | null | null | 2.64 | 2.4 | null | null | null | null | null | null | null | Yes | DDG|M|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER... | [{"datasets":[],"id":31754,"numValue":-1.28,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":31755,"numValue":2.4,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":31756,"numValue":2.64,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":31757,"numValue":null,"references":[],... | [{"id":9453,"numValue":3.0,"position":73,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||||
fireprotdb:8547 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,547 | train | mutant | 921 | 158 | 1,043 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | D76K | D76K | 1 | 1 | 0 | 0 | 76 | D | K | 2 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 76 | A | G | false | false | 112.606978 | 25.7725 | 1,637 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | 1FTG_A:D75K | 44.25 | 0.1 | null | null | null | null | 34.2 | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1FTG_A:D75K","type":"_PDB_CHA... | [{"datasets":[],"id":6044,"numValue":44.25,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6045,"numValue":0.1,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6046,"numValue":34.2,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":6047,"numValue":3.0,"references":[],"s... | [{"id":9456,"numValue":2.0,"position":76,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8549 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,549 | train | mutant | 921 | 158 | 1,043 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | D76K | D76K | 1 | 1 | 0 | 0 | 76 | D | K | 2 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 76 | A | G | false | false | 112.606978 | 25.7725 | 1,651 | ProTherm | 7 | DSC | Thermal | MOPS | 50 mM | null | 1FTG_A:D75K | 41.65 | 2.8 | null | null | 28.3 | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DTM|DH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1FTG_A:D75K","type":"_PDB_CH... | [{"datasets":[],"id":6114,"numValue":41.65,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6115,"numValue":2.8,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6116,"numValue":28.3,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":6117,"numValue":3.0,"references":[],"str... | [{"id":9456,"numValue":2.0,"position":76,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8551 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,551 | train | mutant | 921 | 158 | 1,043 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | D76K | D76K | 1 | 1 | 0 | 0 | 76 | D | K | 2 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 76 | A | G | false | false | 112.606978 | 25.7725 | 1,990 | ProTherm | 7 | Fluorescence, CD | Thermal | Mops | 50 mM | null | NaCl | 0.5 M | 1FTG_A:D75K | 51.05 | 7.8 | null | null | null | null | 17.7 | null | null | null | null | null | null | null | null | null | Yes | TM|DTM|DHVH|REVERSIBILITY | AUTOMUTE_S1925.csv|EASE-MM_S1676.csv|I_Mutant2.0_S1948.csv|I_Mutant2.0_S2087.csv|iPTREE-STAB_S1859.csv|M47andM8_S1810.csv|M47andM8_S2760.csv|PoPMuSiC-2.0_S2648.csv|Saraboji_S1396.csv|STRUM_Q3421.csv|SVM-WIN31_SVM-3D12_S1634.csv|SVM-WIN31_SVM-3D12_S1681.csv | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Fluorescence, CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"I... | [{"datasets":["AUTOMUTE_S1925.csv","EASE-MM_S1676.csv","I_Mutant2.0_S1948.csv","I_Mutant2.0_S2087.csv","iPTREE-STAB_S1859.csv","M47andM8_S1810.csv","M47andM8_S2760.csv","PoPMuSiC-2.0_S2648.csv","Saraboji_S1396.csv","STRUM_Q3421.csv","SVM-WIN31_SVM-3D12_S1634.csv","SVM-WIN31_SVM-3D12_S1681.csv"],"id":7402,"numValue":51.... | [{"id":9456,"numValue":2.0,"position":76,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8552 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,552 | train | mutant | 921 | 158 | 1,043 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | D76K | D76K | 1 | 1 | 0 | 0 | 76 | D | K | 2 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 76 | A | G | false | false | 112.606978 | 25.7725 | 7,885 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:D75K | null | null | null | 0.01 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | khan_protherm_data_mapped.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":["khan_protherm_data_mapped.csv"],"id":26961,"numValue":0.01,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":26962,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":26963,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9456,"numValue":2.0,"position":76,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8553 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,553 | train | mutant | 921 | 158 | 1,043 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | D76K | D76K | 1 | 1 | 0 | 0 | 76 | D | K | 2 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 76 | A | G | false | false | 112.606978 | 25.7725 | 7,893 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:D75K | null | null | null | 1.14 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":[],"id":26985,"numValue":1.14,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":26986,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":26987,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9456,"numValue":2.0,"position":76,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8554 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,554 | train | mutant | 921 | 158 | 1,043 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | D76K | D76K | 1 | 1 | 0 | 0 | 76 | D | K | 2 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 76 | A | G | false | false | 112.606978 | 25.7725 | 7,901 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:D75K | null | null | null | 1.15 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":[],"id":27009,"numValue":1.15,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27010,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27011,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9456,"numValue":2.0,"position":76,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8555 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,555 | train | mutant | 921 | 158 | 1,043 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | D76K | D76K | 1 | 1 | 0 | 0 | 76 | D | K | 2 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 76 | A | G | false | false | 112.606978 | 25.7725 | 7,907 | ProTherm | 7 | DSC | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:D75K | null | null | null | 0.25 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"... | [{"datasets":[],"id":27027,"numValue":0.25,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27028,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27029,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9456,"numValue":2.0,"position":76,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8556 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,556 | train | mutant | 921 | 158 | 1,043 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | D76K | D76K | 1 | 1 | 0 | 0 | 76 | D | K | 2 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 76 | A | G | false | false | 112.606978 | 25.7725 | 7,913 | ProTherm | 7 | DSC | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:D75K | null | null | null | 0.73 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"... | [{"datasets":[],"id":27045,"numValue":0.73,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27046,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27047,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9456,"numValue":2.0,"position":76,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8558 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,558 | train | mutant | 921 | 158 | 1,043 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | D76K | D76K | 1 | 1 | 0 | 0 | 76 | D | K | 2 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 76 | A | G | false | false | 112.606978 | 25.7725 | 8,001 | ProTherm | 7 | Fluorescence, CD | Thermal | Mops | 50 mM | 43.4 | NaCl | 0.5 M | 1FTG_A:D75K | null | null | null | -0.4 | null | 0.34 | null | null | null | null | null | null | null | null | null | null | Yes | DCP|DDG|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":43.4,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence, CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":... | [{"datasets":[],"id":27306,"numValue":0.34,"references":[],"strValue":null,"type":"DCP"},{"datasets":[],"id":27307,"numValue":-0.4,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27308,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9456,"numValue":2.0,"position":76,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8559 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,559 | train | mutant | 921 | 158 | 1,043 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | D76K | D76K | 1 | 1 | 0 | 0 | 76 | D | K | 2 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 76 | A | G | false | false | 112.606978 | 25.7725 | 8,486 | ProTherm | 7 | Fluorescence | Urea | Mops | 50 mM | 25.2 | NaCl | 0.5 M | 1FTG_A:D75K | null | null | null | -0.31 | null | null | null | 1.1 | null | null | null | null | null | null | null | null | Yes | DDG|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.2,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER... | [{"datasets":[],"id":28863,"numValue":-0.31,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":28864,"numValue":1.1,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":28865,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9456,"numValue":2.0,"position":76,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8560 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,560 | train | mutant | 921 | 158 | 1,043 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | D76K | D76K | 1 | 1 | 0 | 0 | 76 | D | K | 2 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 76 | A | G | false | false | 112.606978 | 25.7725 | 9,308 | ProTherm | 7 | Fluorescence | Urea | MOPS | 50 mM | 25 | 1FTG_A:D75K | null | null | null | -1 | null | null | null | 2.47 | 2.45 | null | null | null | null | null | null | null | Yes | DDG|M|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER... | [{"datasets":[],"id":31758,"numValue":-1.0,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":31759,"numValue":2.45,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":31760,"numValue":2.47,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":31761,"numValue":null,"references":[],... | [{"id":9456,"numValue":2.0,"position":76,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||||
fireprotdb:8562 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,562 | train | mutant | 1,110 | 158 | 1,251 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V84I | V84I | 1 | 1 | 0 | 0 | 84 | V | I | 7 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 84 | A | E | true | false | 0.537484 | 4.63 | 2,359 | ProTherm | 7 | Abs, CD, Fluorescence | Thermal | Mops | 5-50 mM | null | NaCl | 15 mM | 1FLV_A:V83I | 44.45 | 0.3 | null | null | null | null | 33.3 | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | AUTOMUTE_S1925.csv|EASE-MM_S1676.csv|HotMuSiC_S1626.csv|I_Mutant2.0_S1948.csv|I_Mutant2.0_S2087.csv|iPTREE-STAB_S1859.csv|M47andM8_S1810.csv|M47andM8_S2760.csv|PON-TStab_dataset.csv|Saraboji_S1396.csv|STRUM_Q306.csv|STRUM_Q3421.csv|SVM-WIN31_SVM-3D12_S1634.csv | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Abs, CD, Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"5-50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","t... | [{"datasets":["AUTOMUTE_S1925.csv","EASE-MM_S1676.csv","HotMuSiC_S1626.csv","I_Mutant2.0_S1948.csv","I_Mutant2.0_S2087.csv","iPTREE-STAB_S1859.csv","M47andM8_S1810.csv","M47andM8_S2760.csv","PON-TStab_dataset.csv","Saraboji_S1396.csv","STRUM_Q306.csv","STRUM_Q3421.csv","SVM-WIN31_SVM-3D12_S1634.csv"],"id":8628,"numValu... | [{"id":9464,"numValue":7.0,"position":84,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||
fireprotdb:8563 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,563 | train | mutant | 1,110 | 158 | 1,251 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V84I | V84I | 1 | 1 | 0 | 0 | 84 | V | I | 7 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 84 | A | E | true | false | 0.537484 | 4.63 | 2,362 | ProTherm | 7 | Abs, CD, Fluorescence | Thermal | Mops | 5-50 mM | null | NaCl | 15 mM | 1FLV_A:V83I | 55.75 | -0.1 | null | null | null | null | 53.1 | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | Broom_S605.csv|STRUM_Q3421.csv|EASE-MM_S238.csv|PON-TStab_dataset.csv | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Abs, CD, Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"5-50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","t... | [{"datasets":["Broom_S605.csv","STRUM_Q3421.csv"],"id":8643,"numValue":55.75,"references":[],"strValue":null,"type":"TM"},{"datasets":["Broom_S605.csv"],"id":8644,"numValue":-0.1,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":8645,"numValue":53.1,"references":[],"strValue":null,"type":"DHVH"},{"datas... | [{"id":9464,"numValue":7.0,"position":84,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||
fireprotdb:8564 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,564 | train | mutant | 1,110 | 158 | 1,251 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V84I | V84I | 1 | 1 | 0 | 0 | 84 | V | I | 7 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 84 | A | E | true | false | 0.537484 | 4.63 | 7,960 | ProTherm | 7 | Abs, CD, Fluorescence | Thermal | Mops | 5-50 mM | 44.3 | NaCl | 15 mM | 1FLV_A:V83I | null | null | null | -0.03 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | potapov_with_uniprot_mapping.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Abs, CD, Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"5-50 mM",... | [{"datasets":["potapov_with_uniprot_mapping.csv"],"id":27186,"numValue":-0.03,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27187,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27188,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9464,"numValue":7.0,"position":84,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||
fireprotdb:8565 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,565 | train | mutant | 1,110 | 158 | 1,251 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V84I | V84I | 1 | 1 | 0 | 0 | 84 | V | I | 7 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 84 | A | E | true | false | 0.537484 | 4.63 | 7,962 | ProTherm | 7 | Abs, CD, Fluorescence | Thermal | Mops | 5-50 mM | 44.3 | NaCl | 15 mM | 1FLV_A:V83I | null | null | null | 0.01 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | khan_protherm_data_mapped.csv|potapov_with_uniprot_mapping.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Abs, CD, Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"5-50 mM",... | [{"datasets":["khan_protherm_data_mapped.csv","potapov_with_uniprot_mapping.csv"],"id":27192,"numValue":0.01,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27193,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27194,"numValue":null,"references":[],"strValue":"Yes","... | [{"id":9464,"numValue":7.0,"position":84,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||
fireprotdb:8566 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,566 | train | mutant | 1,110 | 158 | 1,251 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V84I | V84I | 1 | 1 | 0 | 0 | 84 | V | I | 7 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 84 | A | E | true | false | 0.537484 | 4.63 | 7,965 | ProTherm | 7 | Abs, CD, Fluorescence | Thermal | Mops | 5-50 mM | 44.3 | NaCl | 15 mM | 1FLV_A:V83I | null | null | null | 0.03 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | DDG|REVERSIBILITY | potapov_with_uniprot_mapping.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Abs, CD, Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"5-50 mM",... | [{"datasets":["potapov_with_uniprot_mapping.csv"],"id":27199,"numValue":0.03,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27200,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9464,"numValue":7.0,"position":84,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8567 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,567 | train | mutant | 1,110 | 158 | 1,251 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V84I | V84I | 1 | 1 | 0 | 0 | 84 | V | I | 7 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 84 | A | E | true | false | 0.537484 | 4.63 | 8,002 | ProTherm | 7 | Fluorescence, CD | Thermal | Mops | 50 mM | 43.4 | NaCl | 0.5 M | 1FTG_A:V83I | null | null | null | -0.05 | null | 0.34 | null | null | null | null | null | null | null | null | null | null | Yes | DCP|DDG|REVERSIBILITY | khan_protherm_data_mapped.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":43.4,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence, CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":... | [{"datasets":[],"id":27309,"numValue":0.34,"references":[],"strValue":null,"type":"DCP"},{"datasets":["khan_protherm_data_mapped.csv"],"id":27310,"numValue":-0.05,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27311,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9464,"numValue":7.0,"position":84,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8568 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,568 | train | mutant | 1,110 | 158 | 1,251 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V84I | V84I | 1 | 1 | 0 | 0 | 84 | V | I | 7 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 84 | A | E | true | false | 0.537484 | 4.63 | 8,487 | ProTherm | 7 | Fluorescence | Urea | Mops | 50 mM | 25.2 | NaCl | 0.5 M | 1FTG_A:V83I | null | null | null | -0.06 | null | null | null | 0.74 | null | null | null | null | null | null | null | null | Yes | DDG|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.2,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER... | [{"datasets":[],"id":28866,"numValue":-0.06,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":28867,"numValue":0.74,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":28868,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9464,"numValue":7.0,"position":84,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8570 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,570 | train | mutant | 930 | 158 | 1,052 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | A85G | A85G | 1 | 1 | 0 | 0 | 85 | A | G | 9 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 85 | A | E | false | false | 0 | 4.827 | 1,666 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | NaCl | 15 mM | 1FTG_A:A84G | 39.85 | -4.3 | null | null | null | null | 34.4 | null | null | null | null | null | null | null | null | null | yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"ION"},{"numValu... | [{"datasets":[],"id":6189,"numValue":39.85,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6190,"numValue":-4.3,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6191,"numValue":34.4,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":6192,"numValue":3.0,"references":[],"... | [{"id":9465,"numValue":9.0,"position":85,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8571 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,571 | train | mutant | 930 | 158 | 1,052 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | A85G | A85G | 1 | 1 | 0 | 0 | 85 | A | G | 9 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 85 | A | E | false | false | 0 | 4.827 | 1,684 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | NaCl | 15 mM | 1FTG_A:A84G | 50.45 | -5.4 | null | null | 31.9 | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | TM|DTM|DH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"ION"},{"numValu... | [{"datasets":[],"id":6279,"numValue":50.45,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6280,"numValue":-5.4,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6281,"numValue":31.9,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":6282,"numValue":3.0,"references":[],"st... | [{"id":9465,"numValue":9.0,"position":85,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8572 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,572 | train | mutant | 930 | 158 | 1,052 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | A85G | A85G | 1 | 1 | 0 | 0 | 85 | A | G | 9 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 85 | A | E | false | false | 0 | 4.827 | 7,929 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | NaCl | 15 mM | 1FTG_A:A84G | null | null | null | 0.47 | null | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | DDG|STATE|REVERSIBILITY | khan_protherm_data_mapped.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":["khan_protherm_data_mapped.csv"],"id":27093,"numValue":0.47,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27094,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27095,"numValue":null,"references":[],"strValue":"yes","type":"REVERSIBILITY"}] | [{"id":9465,"numValue":9.0,"position":85,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||
fireprotdb:8573 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,573 | train | mutant | 930 | 158 | 1,052 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | A85G | A85G | 1 | 1 | 0 | 0 | 85 | A | G | 9 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 85 | A | E | false | false | 0 | 4.827 | 7,947 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | NaCl | 15 mM | 1FTG_A:A84G | null | null | null | 1.25 | null | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":[],"id":27147,"numValue":1.25,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27148,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27149,"numValue":null,"references":[],"strValue":"yes","type":"REVERSIBILITY"}] | [{"id":9465,"numValue":9.0,"position":85,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8574 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,574 | train | mutant | 930 | 158 | 1,052 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | A85G | A85G | 1 | 1 | 0 | 0 | 85 | A | G | 9 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 85 | A | E | false | false | 0 | 4.827 | 9,325 | ProTherm | 7 | CD | Urea | MOPS | 50 mM | 25 | NaCl | 15 mM | 1FTG_A:A84G | null | null | null | 2.17 | null | null | null | 1.28 | 2.25 | null | null | null | null | null | null | null | yes | DDG|M|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"... | [{"datasets":[],"id":31826,"numValue":2.17,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":31827,"numValue":2.25,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":31828,"numValue":1.28,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":31829,"numValue":null,"references":[],... | [{"id":9465,"numValue":9.0,"position":85,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8575 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,575 | train | mutant | 1,201 | 158 | 1,347 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | G88A | G88A | 1 | 1 | 0 | 0 | 88 | G | A | 9 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 88 | A | E | true | false | 0.067185 | 4.06875 | 2,363 | ProTherm | 7 | Abs, CD, Fluorescence | Thermal | Mops | 5-50 mM | null | NaCl | 15 mM | 1FLV_A:G87A | 56.15 | null | null | null | null | null | 49.1 | null | null | null | null | null | null | null | null | null | Yes | 2.0 | TM|DHVH|STATE|REVERSIBILITY | EASE-MM_S238.csv|PON-TStab_dataset.csv|AUTOMUTE_S1925.csv|AUTOMUTE_S1962.csv|EASE-MM_S1676.csv|I_Mutant2.0_S1948.csv|I_Mutant2.0_S2087.csv|iPTREE-STAB_S1859.csv|M47andM8_S1810.csv|M47andM8_S2760.csv|PoPMuSiC-2.0_S2648.csv|Saraboji_S2204.csv|STRUM_Q3421.csv|SVM-WIN31_SVM-3D12_S1634.csv|SVM-WIN31_SVM-3D12_S1681.csv | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Abs, CD, Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"5-50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","t... | [{"datasets":["EASE-MM_S238.csv","PON-TStab_dataset.csv"],"id":8648,"numValue":56.15,"references":[],"strValue":null,"type":"TM"},{"datasets":["AUTOMUTE_S1925.csv","AUTOMUTE_S1962.csv","EASE-MM_S1676.csv","I_Mutant2.0_S1948.csv","I_Mutant2.0_S2087.csv","iPTREE-STAB_S1859.csv","M47andM8_S1810.csv","M47andM8_S2760.csv","... | [{"id":9468,"numValue":9.0,"position":88,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||
fireprotdb:8576 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,576 | train | mutant | 1,201 | 158 | 1,347 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | G88A | G88A | 1 | 1 | 0 | 0 | 88 | G | A | 9 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 88 | A | E | true | false | 0.067185 | 4.06875 | 7,966 | ProTherm | 7 | Abs, CD, Fluorescence | Thermal | Mops | 5-50 mM | 44.3 | NaCl | 15 mM | 1FLV_A:G87A | null | null | null | 0.09 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 2.0 | DDG|STATE|REVERSIBILITY | khan_protherm_data_mapped.csv|potapov_with_uniprot_mapping.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Abs, CD, Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"5-50 mM",... | [{"datasets":["khan_protherm_data_mapped.csv","potapov_with_uniprot_mapping.csv"],"id":27201,"numValue":0.09,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27202,"numValue":2.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27203,"numValue":null,"references":[],"strValue":"Yes","... | [{"id":9468,"numValue":9.0,"position":88,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||
fireprotdb:8577 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,577 | train | mutant | 1,201 | 158 | 1,347 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | G88A | G88A | 1 | 1 | 0 | 0 | 88 | G | A | 9 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 88 | A | E | true | false | 0.067185 | 4.06875 | 9,929 | ProTherm | 7 | Fluorescence | Urea | Mops | 50 mM | 25 | 1FLV_A:G87A | null | null | null | 0.13 | null | null | null | 2.09 | 2.36 | null | null | null | null | null | null | null | Yes | DDG|M|CM|REVERSIBILITY | SAAFEC_S1262.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER... | [{"datasets":["SAAFEC_S1262.csv"],"id":34117,"numValue":0.13,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":34118,"numValue":2.36,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":34119,"numValue":2.09,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":34120,"numValue":nul... | [{"id":9468,"numValue":9.0,"position":88,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8578 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,578 | train | mutant | 1,202 | 158 | 1,348 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | G88V | G88V | 1 | 1 | 0 | 0 | 88 | G | V | 9 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 88 | A | E | true | false | 0.067185 | 4.06875 | 2,364 | ProTherm | 7 | Abs, CD, Fluorescence | Thermal | Mops | 5-50 mM | null | NaCl | 15 mM | 1FLV_A:G87V | 58.85 | null | null | null | null | null | 45.3 | null | null | null | null | null | null | null | null | null | Yes | 2.0 | TM|DHVH|STATE|REVERSIBILITY | AUTOMUTE_S1962.csv|Saraboji_S2204.csv|AUTOMUTE_S1925.csv|EASE-MM_S1676.csv|I_Mutant2.0_S1948.csv|I_Mutant2.0_S2087.csv|iPTREE-STAB_S1859.csv|M47andM8_S1810.csv|M47andM8_S2760.csv|PON-TStab_dataset.csv|SVM-WIN31_SVM-3D12_S1634.csv|SVM-WIN31_SVM-3D12_S1681.csv | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Abs, CD, Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"5-50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","t... | [{"datasets":["AUTOMUTE_S1962.csv","Saraboji_S2204.csv"],"id":8652,"numValue":58.85,"references":[],"strValue":null,"type":"TM"},{"datasets":["AUTOMUTE_S1925.csv","AUTOMUTE_S1962.csv","EASE-MM_S1676.csv","I_Mutant2.0_S1948.csv","I_Mutant2.0_S2087.csv","iPTREE-STAB_S1859.csv","M47andM8_S1810.csv","M47andM8_S2760.csv","P... | [{"id":9468,"numValue":9.0,"position":88,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||
fireprotdb:8579 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,579 | train | mutant | 1,202 | 158 | 1,348 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | G88V | G88V | 1 | 1 | 0 | 0 | 88 | G | V | 9 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 88 | A | E | true | false | 0.067185 | 4.06875 | 7,967 | ProTherm | 7 | Abs, CD, Fluorescence | Thermal | Mops | 5-50 mM | 44.3 | NaCl | 15 mM | 1FLV_A:G87V | null | null | null | -0.12 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 2.0 | DDG|STATE|REVERSIBILITY | khan_protherm_data_mapped.csv|potapov_with_uniprot_mapping.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Abs, CD, Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"5-50 mM",... | [{"datasets":["khan_protherm_data_mapped.csv","potapov_with_uniprot_mapping.csv"],"id":27204,"numValue":-0.12,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27205,"numValue":2.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27206,"numValue":null,"references":[],"strValue":"Yes",... | [{"id":9468,"numValue":9.0,"position":88,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||
fireprotdb:8580 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,580 | train | mutant | 1,202 | 158 | 1,348 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | G88V | G88V | 1 | 1 | 0 | 0 | 88 | G | V | 9 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 88 | A | E | true | false | 0.067185 | 4.06875 | 9,930 | ProTherm | 7 | Fluorescence | Urea | Mops | 50 mM | 25 | 1FLV_A:G87V | null | null | null | 0.13 | null | null | null | 2.27 | 2.17 | null | null | null | null | null | null | null | Yes | DDG|M|CM|REVERSIBILITY | SAAFEC_S1262.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER... | [{"datasets":["SAAFEC_S1262.csv"],"id":34121,"numValue":0.13,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":34122,"numValue":2.17,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":34123,"numValue":2.27,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":34124,"numValue":nul... | [{"id":9468,"numValue":9.0,"position":88,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8581 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,581 | train | mutant | 1,203 | 158 | 1,349 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | G88L | G88L | 1 | 1 | 0 | 0 | 88 | G | L | 9 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 88 | A | E | true | false | 0.067185 | 4.06875 | 2,365 | ProTherm | 7 | Abs, CD, Fluorescence | Thermal | Mops | 5-50 mM | null | NaCl | 15 mM | 1FLV_A:G87L | 57.55 | null | null | null | null | null | 41.3 | null | null | null | null | null | null | null | null | null | Yes | 2.0 | TM|DHVH|STATE|REVERSIBILITY | AUTOMUTE_S1925.csv|AUTOMUTE_S1962.csv|EASE-MM_S1676.csv|I_Mutant2.0_S1948.csv|I_Mutant2.0_S2087.csv|iPTREE-STAB_S1859.csv|M47andM8_S1810.csv|M47andM8_S2760.csv|PON-TStab_dataset.csv|Saraboji_S2204.csv|SVM-WIN31_SVM-3D12_S1634.csv|SVM-WIN31_SVM-3D12_S1681.csv|PoPMuSiC-2.0_S2648.csv|STRUM_Q3421.csv | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Abs, CD, Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"5-50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","t... | [{"datasets":["AUTOMUTE_S1925.csv","AUTOMUTE_S1962.csv","EASE-MM_S1676.csv","I_Mutant2.0_S1948.csv","I_Mutant2.0_S2087.csv","iPTREE-STAB_S1859.csv","M47andM8_S1810.csv","M47andM8_S2760.csv","PON-TStab_dataset.csv","Saraboji_S2204.csv","SVM-WIN31_SVM-3D12_S1634.csv","SVM-WIN31_SVM-3D12_S1681.csv"],"id":8656,"numValue":5... | [{"id":9468,"numValue":9.0,"position":88,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||
fireprotdb:8582 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,582 | train | mutant | 1,203 | 158 | 1,349 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | G88L | G88L | 1 | 1 | 0 | 0 | 88 | G | L | 9 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 88 | A | E | true | false | 0.067185 | 4.06875 | 7,968 | ProTherm | 7 | Abs, CD, Fluorescence | Thermal | Mops | 5-50 mM | 44.3 | NaCl | 15 mM | 1FLV_A:G87L | null | null | null | 0.21 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 2.0 | DDG|STATE|REVERSIBILITY | khan_protherm_data_mapped.csv|potapov_with_uniprot_mapping.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Abs, CD, Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"5-50 mM",... | [{"datasets":["khan_protherm_data_mapped.csv","potapov_with_uniprot_mapping.csv"],"id":27207,"numValue":0.21,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27208,"numValue":2.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27209,"numValue":null,"references":[],"strValue":"Yes","... | [{"id":9468,"numValue":9.0,"position":88,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||
fireprotdb:8583 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,583 | train | mutant | 1,203 | 158 | 1,349 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | G88L | G88L | 1 | 1 | 0 | 0 | 88 | G | L | 9 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 88 | A | E | true | false | 0.067185 | 4.06875 | 9,931 | ProTherm | 7 | Fluorescence | Urea | Mops | 50 mM | 25 | 1FLV_A:G87L | null | null | null | 0.64 | null | null | null | 2.2 | 2.01 | null | null | null | null | null | null | null | Yes | DDG|M|CM|REVERSIBILITY | SAAFEC_S1262.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER... | [{"datasets":["SAAFEC_S1262.csv"],"id":34125,"numValue":0.64,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":34126,"numValue":2.01,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":34127,"numValue":2.2,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":34128,"numValue":null... | [{"id":9468,"numValue":9.0,"position":88,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8584 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,584 | train | mutant | 931 | 158 | 1,053 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | N98A | N98A | 1 | 1 | 0 | 0 | 98 | N | A | 7 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 98 | A | T|S | true | true | 29.704468 | 6.544375 | 1,667 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | NaCl | 15 mM | 1FTG_A:N97A | 41.75 | -2.4 | null | null | null | null | 28.6 | null | null | null | null | null | null | null | null | null | yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"ION"},{"numValu... | [{"datasets":[],"id":6194,"numValue":41.75,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6195,"numValue":-2.4,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6196,"numValue":28.6,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":6197,"numValue":3.0,"references":[],"... | [{"id":9478,"numValue":7.0,"position":98,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] |
Subsets and Splits
No community queries yet
The top public SQL queries from the community will appear here once available.