row_id string | dataset_id string | source_dataset string | source_file string | source_table string | source_sha string | row_index int64 | split string | subject_type string | entry_id int64 | sequence_id int64 | target_sequence_id int64 | source_sequence_length int64 | target_sequence_length int64 | protein_id int64 | protein_name string | organism string | isoform int64 | protein_ids string | protein_names string | organisms string | isoforms string | uniprot_accessions string | interpro_accessions string | ec_numbers string | megascale_ids string | other_references string | mutations string | substitutions string | deletions string | insertions string | mutation_count int64 | substitution_count int64 | deletion_count int64 | insertion_count int64 | first_position int64 | first_source_aa string | first_target_aa string | conservation float64 | feature_types string | pdb_ids string | afdb_ids string | structure_ids string | structure_methods string | structure_resolution_min float64 | residue_positions string | residue_chain_names string | residue_secondary_structures string | residue_in_pocket_any bool | residue_in_tunnel_any bool | residue_asa_mean float64 | residue_bfactor_mean float64 | experiment_id int64 | experiment_dataset string | ph float64 | measure string | method string | buffer string | buffer_conc string | exp_temperature float64 | ion string | ion_conc string | pdb_chain_mutation string | tm float64 | dtm float64 | dg float64 | dg_text string | ddg float64 | dh float64 | dcp float64 | dhvh float64 | cm float64 | m_value float64 | trypsin_ml float64 | chymotrypsin_ml float64 | stabilizing float64 | stabilizing_text string | domainome_fitness float64 | domainome_fitness_std float64 | domainome_ddg float64 | domainome_ddg_std float64 | reversibility string | state string | measurement_types string | measurement_datasets string | annotation_types string | publication_id string | publication_type string | publication_title string | publication_year int64 | publication_doi string | publication_pmid string | publication_journal string | publication_url string | publication_author_count int64 | publication_authors string | annotations_json string | measurements_json string | features_json string |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
fireprotdb:8366 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,366 | train | mutant | 1,344 | 154 | 1,517 | 278 | 278 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | P33665 | IPR000400|IPR023099|IPR023346 | 3.2.1.132 | A144L | A144L | 1 | 1 | 0 | 0 | 144 | A | L | 9 | CONSERVATION | 1CHK | 154 | null | 144 | A | H | false | false | 3.090532 | 8.858 | 2,648 | ProTherm | 4.5 | Fluorescence | Thermal | Sodium acetate | 100 mM | null | 1CHK_A:A104L | 60.5 | -6.2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | No | TM|DTM|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 233 | ARTICLE | Quantitative fluorometric analysis of the protective effect of chitosan on thermal unfolding of catalytically active native and genetically-engineered chitosanases. | 2,007 | 10.1016/j.bbapap.2007.05.016 | 17644457 | Biochim Biophys Acta;1774;975-84 | 7 | Roy S?bastien|Fortin M?lanie|Gagnon Julie|Ghinet Mariana Gabriela|Lehoux Jean-Guy|Dupuis Gilles|Brzezinski Ryszard | [{"numValue":4.5,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Sodium acetate","type":"BUFFER"},{"numValue":null,"strValue":"100 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1CHK_A:A... | [{"datasets":[],"id":9711,"numValue":60.5,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":9712,"numValue":-6.2,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":9713,"numValue":null,"references":[],"strValue":"No","type":"REVERSIBILITY"}] | [{"id":9246,"numValue":9.0,"position":144,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8367 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,367 | train | mutant | 1,344 | 154 | 1,517 | 278 | 278 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | P33665 | IPR000400|IPR023099|IPR023346 | 3.2.1.132 | A144L | A144L | 1 | 1 | 0 | 0 | 144 | A | L | 9 | CONSERVATION | 1CHK | 154 | null | 144 | A | H | false | false | 3.090532 | 8.858 | 2,649 | ProTherm | 4.5 | Fluorescence | Thermal | Sodium acetate | 100 mM | null | 1CHK_A:A104L | 62.5 | -7 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | No | TM|DTM|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 233 | ARTICLE | Quantitative fluorometric analysis of the protective effect of chitosan on thermal unfolding of catalytically active native and genetically-engineered chitosanases. | 2,007 | 10.1016/j.bbapap.2007.05.016 | 17644457 | Biochim Biophys Acta;1774;975-84 | 7 | Roy S?bastien|Fortin M?lanie|Gagnon Julie|Ghinet Mariana Gabriela|Lehoux Jean-Guy|Dupuis Gilles|Brzezinski Ryszard | [{"numValue":4.5,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Sodium acetate","type":"BUFFER"},{"numValue":null,"strValue":"100 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1CHK_A:A... | [{"datasets":[],"id":9714,"numValue":62.5,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":9715,"numValue":-7.0,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":9716,"numValue":null,"references":[],"strValue":"No","type":"REVERSIBILITY"}] | [{"id":9246,"numValue":9.0,"position":144,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8368 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,368 | train | mutant | 1,345 | 154 | 1,518 | 278 | 278 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | P33665 | IPR000400|IPR023099|IPR023346 | 3.2.1.132 | K204R | K204R | 1 | 1 | 0 | 0 | 204 | K | R | 3 | CONSERVATION | 1CHK | 154 | null | 204 | A | H | false | false | 90.498589 | 29.173333 | 2,650 | ProTherm | 4.5 | Fluorescence | Thermal | Sodium acetate | 100 mM | null | 1CHK_A:K164R | 53 | -1 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | No | TM|DTM|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 233 | ARTICLE | Quantitative fluorometric analysis of the protective effect of chitosan on thermal unfolding of catalytically active native and genetically-engineered chitosanases. | 2,007 | 10.1016/j.bbapap.2007.05.016 | 17644457 | Biochim Biophys Acta;1774;975-84 | 7 | Roy S?bastien|Fortin M?lanie|Gagnon Julie|Ghinet Mariana Gabriela|Lehoux Jean-Guy|Dupuis Gilles|Brzezinski Ryszard | [{"numValue":4.5,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Sodium acetate","type":"BUFFER"},{"numValue":null,"strValue":"100 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1CHK_A:K... | [{"datasets":[],"id":9717,"numValue":53.0,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":9718,"numValue":-1.0,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":9719,"numValue":null,"references":[],"strValue":"No","type":"REVERSIBILITY"}] | [{"id":9306,"numValue":3.0,"position":204,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8369 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,369 | train | mutant | 1,345 | 154 | 1,518 | 278 | 278 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | P33665 | IPR000400|IPR023099|IPR023346 | 3.2.1.132 | K204R | K204R | 1 | 1 | 0 | 0 | 204 | K | R | 3 | CONSERVATION | 1CHK | 154 | null | 204 | A | H | false | false | 90.498589 | 29.173333 | 2,651 | ProTherm | 4.5 | Fluorescence | Thermal | Sodium acetate | 100 mM | null | 1CHK_A:K164R | 54.7 | -0.2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | No | TM|DTM|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 233 | ARTICLE | Quantitative fluorometric analysis of the protective effect of chitosan on thermal unfolding of catalytically active native and genetically-engineered chitosanases. | 2,007 | 10.1016/j.bbapap.2007.05.016 | 17644457 | Biochim Biophys Acta;1774;975-84 | 7 | Roy S?bastien|Fortin M?lanie|Gagnon Julie|Ghinet Mariana Gabriela|Lehoux Jean-Guy|Dupuis Gilles|Brzezinski Ryszard | [{"numValue":4.5,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Sodium acetate","type":"BUFFER"},{"numValue":null,"strValue":"100 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1CHK_A:K... | [{"datasets":[],"id":9720,"numValue":54.7,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":9721,"numValue":-0.2,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":9722,"numValue":null,"references":[],"strValue":"No","type":"REVERSIBILITY"}] | [{"id":9306,"numValue":3.0,"position":204,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8370 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,370 | train | mutant | 1,345 | 154 | 1,518 | 278 | 278 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | P33665 | IPR000400|IPR023099|IPR023346 | 3.2.1.132 | K204R | K204R | 1 | 1 | 0 | 0 | 204 | K | R | 3 | CONSERVATION | 1CHK | 154 | null | 204 | A | H | false | false | 90.498589 | 29.173333 | 2,652 | ProTherm | 4.5 | Fluorescence | Thermal | Sodium acetate | 100 mM | null | 1CHK_A:K164R | 63.2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | No | TM|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 233 | ARTICLE | Quantitative fluorometric analysis of the protective effect of chitosan on thermal unfolding of catalytically active native and genetically-engineered chitosanases. | 2,007 | 10.1016/j.bbapap.2007.05.016 | 17644457 | Biochim Biophys Acta;1774;975-84 | 7 | Roy S?bastien|Fortin M?lanie|Gagnon Julie|Ghinet Mariana Gabriela|Lehoux Jean-Guy|Dupuis Gilles|Brzezinski Ryszard | [{"numValue":4.5,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Sodium acetate","type":"BUFFER"},{"numValue":null,"strValue":"100 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1CHK_A:K... | [{"datasets":[],"id":9723,"numValue":63.2,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":9724,"numValue":null,"references":[],"strValue":"No","type":"REVERSIBILITY"}] | [{"id":9306,"numValue":3.0,"position":204,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8371 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,371 | train | mutant | 1,345 | 154 | 1,518 | 278 | 278 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | P33665 | IPR000400|IPR023099|IPR023346 | 3.2.1.132 | K204R | K204R | 1 | 1 | 0 | 0 | 204 | K | R | 3 | CONSERVATION | 1CHK | 154 | null | 204 | A | H | false | false | 90.498589 | 29.173333 | 2,653 | ProTherm | 4.5 | Fluorescence | Thermal | Sodium acetate | 100 mM | null | 1CHK_A:K164R | 66.5 | -0.2 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | No | TM|DTM|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 233 | ARTICLE | Quantitative fluorometric analysis of the protective effect of chitosan on thermal unfolding of catalytically active native and genetically-engineered chitosanases. | 2,007 | 10.1016/j.bbapap.2007.05.016 | 17644457 | Biochim Biophys Acta;1774;975-84 | 7 | Roy S?bastien|Fortin M?lanie|Gagnon Julie|Ghinet Mariana Gabriela|Lehoux Jean-Guy|Dupuis Gilles|Brzezinski Ryszard | [{"numValue":4.5,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Sodium acetate","type":"BUFFER"},{"numValue":null,"strValue":"100 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1CHK_A:K... | [{"datasets":[],"id":9725,"numValue":66.5,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":9726,"numValue":-0.2,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":9727,"numValue":null,"references":[],"strValue":"No","type":"REVERSIBILITY"}] | [{"id":9306,"numValue":3.0,"position":204,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8372 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,372 | train | mutant | 1,345 | 154 | 1,518 | 278 | 278 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | P33665 | IPR000400|IPR023099|IPR023346 | 3.2.1.132 | K204R | K204R | 1 | 1 | 0 | 0 | 204 | K | R | 3 | CONSERVATION | 1CHK | 154 | null | 204 | A | H | false | false | 90.498589 | 29.173333 | 2,654 | ProTherm | 4.5 | Fluorescence | Thermal | Sodium acetate | 100 mM | null | 1CHK_A:K164R | 68.6 | -0.9 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | No | TM|DTM|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 233 | ARTICLE | Quantitative fluorometric analysis of the protective effect of chitosan on thermal unfolding of catalytically active native and genetically-engineered chitosanases. | 2,007 | 10.1016/j.bbapap.2007.05.016 | 17644457 | Biochim Biophys Acta;1774;975-84 | 7 | Roy S?bastien|Fortin M?lanie|Gagnon Julie|Ghinet Mariana Gabriela|Lehoux Jean-Guy|Dupuis Gilles|Brzezinski Ryszard | [{"numValue":4.5,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Sodium acetate","type":"BUFFER"},{"numValue":null,"strValue":"100 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1CHK_A:K... | [{"datasets":[],"id":9728,"numValue":68.6,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":9729,"numValue":-0.9,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":9730,"numValue":null,"references":[],"strValue":"No","type":"REVERSIBILITY"}] | [{"id":9306,"numValue":3.0,"position":204,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8373 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,373 | train | mutant | 138 | 154 | 157 | 278 | 278 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | P33665 | IPR000400|IPR023099|IPR023346 | 3.2.1.132 | W267F | W267F | 1 | 1 | 0 | 0 | 267 | W | F | 9 | CONSERVATION | 1CHK | 154 | null | 267 | A | E | true | false | 9.340326 | 19.782857 | 256 | ProTherm | 7 | CD | Thermal | sodium phosphate | 50 mM | null | 1CHK_A:W227F | 35.9 | -6.8 | null | null | null | null | 135 | null | null | null | null | null | null | null | null | null | yes(79%) | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | AUTOMUTE_S1749.csv|Saraboji_S1791.csv | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 23 | ARTICLE | Thermal unfolding of chitosanase from Streptomyces sp. N174: role of tryptophan residues in the protein structure stabilization. | 1,999 | 10.1016/s0167-4838(98)00243-x | 9989221 | Biochim Biophys Acta;1429;365-76 | 6 | Honda Y|Fukamizo T|Okajima T|Goto S|Boucher I|Brzezinski R | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"sodium phosphate","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1CHK_A:W227F","ty... | [{"datasets":[],"id":1048,"numValue":35.9,"references":[],"strValue":null,"type":"TM"},{"datasets":["AUTOMUTE_S1749.csv","Saraboji_S1791.csv"],"id":1049,"numValue":-6.8,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":1050,"numValue":135.0,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"... | [{"id":9369,"numValue":9.0,"position":267,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8374 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,374 | train | mutant | 138 | 154 | 157 | 278 | 278 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | P33665 | IPR000400|IPR023099|IPR023346 | 3.2.1.132 | W267F | W267F | 1 | 1 | 0 | 0 | 267 | W | F | 9 | CONSERVATION | 1CHK | 154 | null | 267 | A | E | true | false | 9.340326 | 19.782857 | 259 | ProTherm | 7 | CD | Thermal | sodium phosphate | 50 mM | null | 1CHK_A:W227F | 45.8 | -6.4 | null | null | null | null | 65 | null | null | null | null | null | null | null | null | null | yes(79%) | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | AUTOMUTE_S1749.csv|Saraboji_S1791.csv | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 23 | ARTICLE | Thermal unfolding of chitosanase from Streptomyces sp. N174: role of tryptophan residues in the protein structure stabilization. | 1,999 | 10.1016/s0167-4838(98)00243-x | 9989221 | Biochim Biophys Acta;1429;365-76 | 6 | Honda Y|Fukamizo T|Okajima T|Goto S|Boucher I|Brzezinski R | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"sodium phosphate","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1CHK_A:W227F","ty... | [{"datasets":[],"id":1063,"numValue":45.8,"references":[],"strValue":null,"type":"TM"},{"datasets":["AUTOMUTE_S1749.csv","Saraboji_S1791.csv"],"id":1064,"numValue":-6.4,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":1065,"numValue":65.0,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"i... | [{"id":9369,"numValue":9.0,"position":267,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8375 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,375 | train | mutant | 138 | 154 | 157 | 278 | 278 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | P33665 | IPR000400|IPR023099|IPR023346 | 3.2.1.132 | W267F | W267F | 1 | 1 | 0 | 0 | 267 | W | F | 9 | CONSERVATION | 1CHK | 154 | null | 267 | A | E | true | false | 9.340326 | 19.782857 | 262 | ProTherm | 7 | Fluorescence | Thermal | sodium phosphate | 50 mM | null | 1CHK_A:W227F | 37.3 | -5.9 | null | null | null | null | 131.9 | null | null | null | null | null | null | null | null | null | yes(81%) | TM|DTM|DHVH|REVERSIBILITY | AUTOMUTE_S1749.csv|Saraboji_S1791.csv | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 23 | ARTICLE | Thermal unfolding of chitosanase from Streptomyces sp. N174: role of tryptophan residues in the protein structure stabilization. | 1,999 | 10.1016/s0167-4838(98)00243-x | 9989221 | Biochim Biophys Acta;1429;365-76 | 6 | Honda Y|Fukamizo T|Okajima T|Goto S|Boucher I|Brzezinski R | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"sodium phosphate","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1CHK_A:... | [{"datasets":[],"id":1076,"numValue":37.3,"references":[],"strValue":null,"type":"TM"},{"datasets":["AUTOMUTE_S1749.csv","Saraboji_S1791.csv"],"id":1077,"numValue":-5.9,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":1078,"numValue":131.9,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"... | [{"id":9369,"numValue":9.0,"position":267,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8376 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,376 | train | mutant | 138 | 154 | 157 | 278 | 278 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | P33665 | IPR000400|IPR023099|IPR023346 | 3.2.1.132 | W267F | W267F | 1 | 1 | 0 | 0 | 267 | W | F | 9 | CONSERVATION | 1CHK | 154 | null | 267 | A | E | true | false | 9.340326 | 19.782857 | 7,461 | ProTherm | 7 | CD | Thermal | sodium phosphate | 50 mM | 52.2 | 1CHK_A:W227F | null | null | null | 1.31 | null | null | null | null | null | null | null | null | null | null | null | null | yes(79%) | 3.0 | DDG|STATE|REVERSIBILITY | khan_protherm_data_mapped.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 23 | ARTICLE | Thermal unfolding of chitosanase from Streptomyces sp. N174: role of tryptophan residues in the protein structure stabilization. | 1,999 | 10.1016/s0167-4838(98)00243-x | 9989221 | Biochim Biophys Acta;1429;365-76 | 6 | Honda Y|Fukamizo T|Okajima T|Goto S|Boucher I|Brzezinski R | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":52.2,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"sodium phosphate","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"B... | [{"datasets":["khan_protherm_data_mapped.csv"],"id":25917,"numValue":1.31,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":25918,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":25919,"numValue":null,"references":[],"strValue":"yes(79%)","type":"REVERSIBILITY"}] | [{"id":9369,"numValue":9.0,"position":267,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8377 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,377 | train | mutant | 138 | 154 | 157 | 278 | 278 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | P33665 | IPR000400|IPR023099|IPR023346 | 3.2.1.132 | W267F | W267F | 1 | 1 | 0 | 0 | 267 | W | F | 9 | CONSERVATION | 1CHK | 154 | null | 267 | A | E | true | false | 9.340326 | 19.782857 | 8,009 | ProTherm | 7 | Fluorescence | Thermal | sodium phosphate | 50 mM | 43.2 | 1CHK_A:W227F | null | null | null | 2.51 | null | null | null | null | null | null | null | null | null | null | null | null | yes(81%) | DDG|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 23 | ARTICLE | Thermal unfolding of chitosanase from Streptomyces sp. N174: role of tryptophan residues in the protein structure stabilization. | 1,999 | 10.1016/s0167-4838(98)00243-x | 9989221 | Biochim Biophys Acta;1429;365-76 | 6 | Honda Y|Fukamizo T|Okajima T|Goto S|Boucher I|Brzezinski R | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":43.2,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"sodium phosphate","type":"BUFFER"},{"numValue":null,"strValue":"50 mM"... | [{"datasets":[],"id":27328,"numValue":2.51,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27329,"numValue":null,"references":[],"strValue":"yes(81%)","type":"REVERSIBILITY"}] | [{"id":9369,"numValue":9.0,"position":267,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8378 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,378 | train | mutant | 138 | 154 | 157 | 278 | 278 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | 19 | Chitosanase | Streptomyces sp. (strain N174) | 1 | P33665 | IPR000400|IPR023099|IPR023346 | 3.2.1.132 | W267F | W267F | 1 | 1 | 0 | 0 | 267 | W | F | 9 | CONSERVATION | 1CHK | 154 | null | 267 | A | E | true | false | 9.340326 | 19.782857 | 8,012 | ProTherm | 7 | CD | Thermal | sodium phosphate | 50 mM | 42.7 | 1CHK_A:W227F | null | null | null | 2.97 | null | null | null | null | null | null | null | null | null | null | null | null | yes(79%) | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 23 | ARTICLE | Thermal unfolding of chitosanase from Streptomyces sp. N174: role of tryptophan residues in the protein structure stabilization. | 1,999 | 10.1016/s0167-4838(98)00243-x | 9989221 | Biochim Biophys Acta;1429;365-76 | 6 | Honda Y|Fukamizo T|Okajima T|Goto S|Boucher I|Brzezinski R | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":42.7,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"sodium phosphate","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"B... | [{"datasets":[],"id":27336,"numValue":2.97,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27337,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27338,"numValue":null,"references":[],"strValue":"yes(79%)","type":"REVERSIBILITY"}] | [{"id":9369,"numValue":9.0,"position":267,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8379 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,379 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 19,786 | ProTherm | 6 | DSC | Thermal | sodium phosphate | 20 mM | null | 57.2 | null | null | null | 62.14 | 1.33 | 63.34 | null | null | null | null | null | null | null | null | null | yes | TM|DH|DCP|DHVH|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC | 1291 | ARTICLE | Conformational stability of apoflavodoxin. | 1,996 | 10.1002/pro.5560050716 | 8819170 | Protein Sci;5;1376-88 | 4 | L?pez-Lacomba J L|Genzor C G|Beldarra?n A|G?mez-Moreno C | [{"numValue":6.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"sodium phosphate","type":"BUFFER"},{"numValue":null,"strValue":"20 mM","type":"BUFFER_CONC"}] | [{"datasets":[],"id":72713,"numValue":57.2,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":72714,"numValue":62.14,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":72715,"numValue":1.33,"references":[],"strValue":null,"type":"DCP"},{"datasets":[],"id":72716,"numValue":63.34,"references":... | ||||||||||||||||||||||||||
fireprotdb:8380 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,380 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 19,787 | ProTherm | 6 | DSC | Thermal | phosphate | 50 mM | null | 57.3 | null | null | null | 62.62 | 1.33 | 61.9 | null | null | null | null | null | null | null | null | null | yes | TM|DH|DCP|DHVH|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC | 1291 | ARTICLE | Conformational stability of apoflavodoxin. | 1,996 | 10.1002/pro.5560050716 | 8819170 | Protein Sci;5;1376-88 | 4 | L?pez-Lacomba J L|Genzor C G|Beldarra?n A|G?mez-Moreno C | [{"numValue":6.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"phosphate","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}] | [{"datasets":[],"id":72718,"numValue":57.3,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":72719,"numValue":62.62,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":72720,"numValue":1.33,"references":[],"strValue":null,"type":"DCP"},{"datasets":[],"id":72721,"numValue":61.9,"references":[... | ||||||||||||||||||||||||||
fireprotdb:8381 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,381 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 19,788 | ProTherm | 7 | DSC | Thermal | phosphate | 20 mM | null | 57.4 | null | null | null | 63.1 | 1.36 | 65.06 | null | null | null | null | null | null | null | null | null | yes | TM|DH|DCP|DHVH|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC | 1291 | ARTICLE | Conformational stability of apoflavodoxin. | 1,996 | 10.1002/pro.5560050716 | 8819170 | Protein Sci;5;1376-88 | 4 | L?pez-Lacomba J L|Genzor C G|Beldarra?n A|G?mez-Moreno C | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"phosphate","type":"BUFFER"},{"numValue":null,"strValue":"20 mM","type":"BUFFER_CONC"}] | [{"datasets":[],"id":72723,"numValue":57.4,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":72724,"numValue":63.1,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":72725,"numValue":1.36,"references":[],"strValue":null,"type":"DCP"},{"datasets":[],"id":72726,"numValue":65.06,"references":[... | ||||||||||||||||||||||||||
fireprotdb:8382 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,382 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 19,789 | ProTherm | 7 | DSC | Thermal | phosphate | 50 mM | null | 57.3 | null | null | null | 63.34 | 1.36 | 62.09 | null | null | null | null | null | null | null | null | null | yes | TM|DH|DCP|DHVH|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC | 1291 | ARTICLE | Conformational stability of apoflavodoxin. | 1,996 | 10.1002/pro.5560050716 | 8819170 | Protein Sci;5;1376-88 | 4 | L?pez-Lacomba J L|Genzor C G|Beldarra?n A|G?mez-Moreno C | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"phosphate","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}] | [{"datasets":[],"id":72728,"numValue":57.3,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":72729,"numValue":63.34,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":72730,"numValue":1.36,"references":[],"strValue":null,"type":"DCP"},{"datasets":[],"id":72731,"numValue":62.09,"references":... | ||||||||||||||||||||||||||
fireprotdb:8383 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,383 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 19,790 | ProTherm | 8 | DSC | Thermal | phosphate | 20 mM | null | 57.3 | null | null | null | 63.1 | 1.31 | 65.05 | null | null | null | null | null | null | null | null | null | yes | TM|DH|DCP|DHVH|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC | 1291 | ARTICLE | Conformational stability of apoflavodoxin. | 1,996 | 10.1002/pro.5560050716 | 8819170 | Protein Sci;5;1376-88 | 4 | L?pez-Lacomba J L|Genzor C G|Beldarra?n A|G?mez-Moreno C | [{"numValue":8.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"phosphate","type":"BUFFER"},{"numValue":null,"strValue":"20 mM","type":"BUFFER_CONC"}] | [{"datasets":[],"id":72733,"numValue":57.3,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":72734,"numValue":63.1,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":72735,"numValue":1.31,"references":[],"strValue":null,"type":"DCP"},{"datasets":[],"id":72736,"numValue":65.05,"references":[... | ||||||||||||||||||||||||||
fireprotdb:8384 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,384 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 19,791 | ProTherm | 8 | DSC | Thermal | phosphate | 50 mM | null | 57.3 | null | null | null | 63.58 | 1.31 | 64.05 | null | null | null | null | null | null | null | null | null | yes | TM|DH|DCP|DHVH|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC | 1291 | ARTICLE | Conformational stability of apoflavodoxin. | 1,996 | 10.1002/pro.5560050716 | 8819170 | Protein Sci;5;1376-88 | 4 | L?pez-Lacomba J L|Genzor C G|Beldarra?n A|G?mez-Moreno C | [{"numValue":8.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"phosphate","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}] | [{"datasets":[],"id":72738,"numValue":57.3,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":72739,"numValue":63.58,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":72740,"numValue":1.31,"references":[],"strValue":null,"type":"DCP"},{"datasets":[],"id":72741,"numValue":64.05,"references":... | ||||||||||||||||||||||||||
fireprotdb:8385 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,385 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 19,792 | ProTherm | 9 | DSC | Thermal | phosphate | 50 mM | null | 57.3 | null | null | null | 64.05 | 1.37 | 66.03 | null | null | null | null | null | null | null | null | null | yes | TM|DH|DCP|DHVH|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC | 1291 | ARTICLE | Conformational stability of apoflavodoxin. | 1,996 | 10.1002/pro.5560050716 | 8819170 | Protein Sci;5;1376-88 | 4 | L?pez-Lacomba J L|Genzor C G|Beldarra?n A|G?mez-Moreno C | [{"numValue":9.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"phosphate","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}] | [{"datasets":[],"id":72743,"numValue":57.3,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":72744,"numValue":64.05,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":72745,"numValue":1.37,"references":[],"strValue":null,"type":"DCP"},{"datasets":[],"id":72746,"numValue":66.03,"references":... | ||||||||||||||||||||||||||
fireprotdb:8386 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,386 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 19,793 | ProTherm | 10 | DSC | Thermal | glycine | 50 mM | null | 48.9 | null | null | null | 53.54 | 1.39 | 50.04 | null | null | null | null | null | null | null | null | null | yes | TM|DH|DCP|DHVH|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC | 1291 | ARTICLE | Conformational stability of apoflavodoxin. | 1,996 | 10.1002/pro.5560050716 | 8819170 | Protein Sci;5;1376-88 | 4 | L?pez-Lacomba J L|Genzor C G|Beldarra?n A|G?mez-Moreno C | [{"numValue":10.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"glycine","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}] | [{"datasets":[],"id":72748,"numValue":48.9,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":72749,"numValue":53.54,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":72750,"numValue":1.39,"references":[],"strValue":null,"type":"DCP"},{"datasets":[],"id":72751,"numValue":50.04,"references":... | ||||||||||||||||||||||||||
fireprotdb:8387 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,387 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 19,794 | ProTherm | 11 | DSC | Thermal | glycine | 50 mM | null | 40.3 | null | null | null | 49.24 | null | null | null | null | null | null | null | null | null | null | null | no | TM|DH|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC | 1291 | ARTICLE | Conformational stability of apoflavodoxin. | 1,996 | 10.1002/pro.5560050716 | 8819170 | Protein Sci;5;1376-88 | 4 | L?pez-Lacomba J L|Genzor C G|Beldarra?n A|G?mez-Moreno C | [{"numValue":11.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"glycine","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}] | [{"datasets":[],"id":72753,"numValue":40.3,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":72754,"numValue":49.24,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":72755,"numValue":null,"references":[],"strValue":"no","type":"REVERSIBILITY"}] | ||||||||||||||||||||||||||
fireprotdb:8388 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,388 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 21,025 | ProTherm | 6 | Fluorescence | Urea | MES | 375 mM | 25 | null | null | null | null | null | null | null | 2.41 | null | null | null | null | null | null | null | null | Unknown | CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC | 734 | ARTICLE | Energetics of a hydrogen bond (charged and neutral) and of a cation-pi interaction in apoflavodoxin. | 1,999 | 10.1006/jmbi.1999.2863 | 10388575 | J Mol Biol;290;319-30 | 3 | Sancho J|Romero A|Fern?ndez-Recio J | [{"numValue":6.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"MES","type":"BUFFER"},{"numValue":null,"strValue":"375 mM","type":"BUFFER... | [{"datasets":[],"id":76679,"numValue":2.41,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":76680,"numValue":null,"references":[],"strValue":"Unknown","type":"REVERSIBILITY"}] | ||||||||||||||||||||||||||
fireprotdb:8389 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,389 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 21,026 | ProTherm | 8.5 | Fluorescence | Urea | Tris | 583 mM | 25 | null | null | null | null | null | null | null | 1.78 | null | null | null | null | null | null | null | null | Unknown | CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC | 734 | ARTICLE | Energetics of a hydrogen bond (charged and neutral) and of a cation-pi interaction in apoflavodoxin. | 1,999 | 10.1006/jmbi.1999.2863 | 10388575 | J Mol Biol;290;319-30 | 3 | Sancho J|Romero A|Fern?ndez-Recio J | [{"numValue":8.5,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"Tris","type":"BUFFER"},{"numValue":null,"strValue":"583 mM","type":"BUFFE... | [{"datasets":[],"id":76681,"numValue":1.78,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":76682,"numValue":null,"references":[],"strValue":"Unknown","type":"REVERSIBILITY"}] | ||||||||||||||||||||||||||
fireprotdb:8390 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,390 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 21,241 | ProTherm | 7.5 | CD | GdnHCl | Tris-HCl | 20 mM | 25 | NaCl | 40 mM | null | null | 6.3 | null | null | null | null | 2.8 | 2.3 | null | null | null | null | null | null | null | Unknown | DG|M|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC | 1449 | ARTICLE | Mutations of surface residues in Anabaena vegetative and heterocyst ferredoxin that affect thermodynamic stability as determined by guanidine hydrochloride denaturation. | 1,995 | 10.1002/pro.5560040108 | 7773177 | Protein Sci;4;58-64 | 6 | Cheng H|Xia B|Markley J L|Caffrey M S|Hurley J K|Chae Y K | [{"numValue":7.5,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"GdnHCl","type":"METHOD"},{"numValue":null,"strValue":"Tris-HCl","type":"BUFFER"},{"numValue":null,"strValue":"20 mM","type":"BUFFER_CON... | [{"datasets":[],"id":77300,"numValue":6.3,"references":[],"strValue":null,"type":"DG"},{"datasets":[],"id":77301,"numValue":2.3,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":77302,"numValue":2.8,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":77303,"numValue":null,"references":[],"str... | ||||||||||||||||||||||||
fireprotdb:8391 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,391 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 21,242 | ProTherm | 7.5 | CD | GdnHCl | Tris-HCl | 20 mM | 25 | NaCl | 40 mM | null | null | 4.5 | null | null | null | null | 2.3 | 2 | null | null | null | null | null | null | null | Unknown | DG|M|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC | 1449 | ARTICLE | Mutations of surface residues in Anabaena vegetative and heterocyst ferredoxin that affect thermodynamic stability as determined by guanidine hydrochloride denaturation. | 1,995 | 10.1002/pro.5560040108 | 7773177 | Protein Sci;4;58-64 | 6 | Cheng H|Xia B|Markley J L|Caffrey M S|Hurley J K|Chae Y K | [{"numValue":7.5,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"GdnHCl","type":"METHOD"},{"numValue":null,"strValue":"Tris-HCl","type":"BUFFER"},{"numValue":null,"strValue":"20 mM","type":"BUFFER_CON... | [{"datasets":[],"id":77304,"numValue":4.5,"references":[],"strValue":null,"type":"DG"},{"datasets":[],"id":77305,"numValue":2.0,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":77306,"numValue":2.3,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":77307,"numValue":null,"references":[],"str... | ||||||||||||||||||||||||
fireprotdb:8392 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,392 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 21,359 | ProTherm | 7 | DSC | Urea | sodium phosphate | 20 mM | 25 | null | null | 4.09 | null | null | null | null | null | null | null | null | null | null | null | null | null | yes | DG|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC | 1291 | ARTICLE | Conformational stability of apoflavodoxin. | 1,996 | 10.1002/pro.5560050716 | 8819170 | Protein Sci;5;1376-88 | 4 | L?pez-Lacomba J L|Genzor C G|Beldarra?n A|G?mez-Moreno C | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"sodium phosphate","type":"BUFFER"},{"numValue":null,"strValue":"20 mM","type":"BUF... | [{"datasets":[],"id":77704,"numValue":4.09,"references":[],"strValue":null,"type":"DG"},{"datasets":[],"id":77705,"numValue":null,"references":[],"strValue":"yes","type":"REVERSIBILITY"}] | ||||||||||||||||||||||||||
fireprotdb:8393 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,393 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 21,360 | ProTherm | 7 | DSC | Thermal | Sodium phosphate | 50 mM | 25 | null | null | 3.9 | null | 17.95 | 1.39 | null | null | null | null | null | null | null | null | null | null | yes | DH|DCP|DG|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC | 1291 | ARTICLE | Conformational stability of apoflavodoxin. | 1,996 | 10.1002/pro.5560050716 | 8819170 | Protein Sci;5;1376-88 | 4 | L?pez-Lacomba J L|Genzor C G|Beldarra?n A|G?mez-Moreno C | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Sodium phosphate","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"... | [{"datasets":[],"id":77706,"numValue":17.95,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":77707,"numValue":1.39,"references":[],"strValue":null,"type":"DCP"},{"datasets":[],"id":77708,"numValue":3.9,"references":[],"strValue":null,"type":"DG"},{"datasets":[],"id":77709,"numValue":null,"references":[]... | ||||||||||||||||||||||||||
fireprotdb:8395 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,395 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 22,431 | ProTherm | 7 | Fluorescence | Thermal | MOPS | 1 mM | null | Chol Cl | 0.5 M | 44.15 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | TM|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC | 1602 | ARTICLE | Salt-induced stabilization of apoflavodoxin at neutral pH is mediated through cation-specific effects. | 2,002 | 10.1110/ps.2980102 | 11967382 | Protein Sci;11;1260-73 | 7 | Maldonado Susana|Ir?n Mar?a Pilar|Campos Luis Alberto|Rubio Jos? Antonio|Luquita Alejandra|Lostao Anabel|Wang Renjie | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"1 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"Chol Cl","type":"ION... | [{"datasets":[],"id":80919,"numValue":44.15,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":80920,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":80921,"numValue":null,"references":[],"strValue":"yes","type":"REVERSIBILITY"}] | |||||||||||||||||||||||
fireprotdb:8396 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,396 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 22,432 | ProTherm | 7 | Fluorescence | Thermal | MOPS | 1 mM | null | 37.35 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | TM|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC | 1602 | ARTICLE | Salt-induced stabilization of apoflavodoxin at neutral pH is mediated through cation-specific effects. | 2,002 | 10.1110/ps.2980102 | 11967382 | Protein Sci;11;1260-73 | 7 | Maldonado Susana|Ir?n Mar?a Pilar|Campos Luis Alberto|Rubio Jos? Antonio|Luquita Alejandra|Lostao Anabel|Wang Renjie | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"1 mM","type":"BUFFER_CONC"}] | [{"datasets":[],"id":80922,"numValue":37.35,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":80923,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":80924,"numValue":null,"references":[],"strValue":"yes","type":"REVERSIBILITY"}] | |||||||||||||||||||||||||
fireprotdb:8397 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,397 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 22,433 | ProTherm | 7 | Fluorescence | Thermal | MOPS | 1 mM | null | 58.95 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | TM|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC | 1602 | ARTICLE | Salt-induced stabilization of apoflavodoxin at neutral pH is mediated through cation-specific effects. | 2,002 | 10.1110/ps.2980102 | 11967382 | Protein Sci;11;1260-73 | 7 | Maldonado Susana|Ir?n Mar?a Pilar|Campos Luis Alberto|Rubio Jos? Antonio|Luquita Alejandra|Lostao Anabel|Wang Renjie | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"1 mM","type":"BUFFER_CONC"}] | [{"datasets":[],"id":80925,"numValue":58.95,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":80926,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":80927,"numValue":null,"references":[],"strValue":"yes","type":"REVERSIBILITY"}] | |||||||||||||||||||||||||
fireprotdb:8398 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,398 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 22,434 | ProTherm | 7 | Fluorescence | Thermal | MOPS | 1 mM | null | Chol Cl | 0.5 M | 54.45 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | TM|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC | 1602 | ARTICLE | Salt-induced stabilization of apoflavodoxin at neutral pH is mediated through cation-specific effects. | 2,002 | 10.1110/ps.2980102 | 11967382 | Protein Sci;11;1260-73 | 7 | Maldonado Susana|Ir?n Mar?a Pilar|Campos Luis Alberto|Rubio Jos? Antonio|Luquita Alejandra|Lostao Anabel|Wang Renjie | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"1 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"Chol Cl","type":"ION... | [{"datasets":[],"id":80928,"numValue":54.45,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":80929,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":80930,"numValue":null,"references":[],"strValue":"yes","type":"REVERSIBILITY"}] | |||||||||||||||||||||||
fireprotdb:8399 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,399 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 22,435 | ProTherm | 7 | Fluorescence | Thermal | MOPS | 1 mM | null | NaCl | 0.5 M | 61.45 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | TM|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC | 1602 | ARTICLE | Salt-induced stabilization of apoflavodoxin at neutral pH is mediated through cation-specific effects. | 2,002 | 10.1110/ps.2980102 | 11967382 | Protein Sci;11;1260-73 | 7 | Maldonado Susana|Ir?n Mar?a Pilar|Campos Luis Alberto|Rubio Jos? Antonio|Luquita Alejandra|Lostao Anabel|Wang Renjie | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"1 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"ION"},... | [{"datasets":[],"id":80931,"numValue":61.45,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":80932,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":80933,"numValue":null,"references":[],"strValue":"yes","type":"REVERSIBILITY"}] | |||||||||||||||||||||||
fireprotdb:8400 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,400 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 22,974 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | 44.15 | null | null | null | null | null | 33.9 | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}] | [{"datasets":[],"id":82545,"numValue":44.15,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":82546,"numValue":33.9,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":82547,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":82548,"numValue":null,"references... | |||||||||||||||||||||||||
fireprotdb:8401 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,401 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 22,975 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | 55.85 | null | null | null | null | null | 52.7 | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}] | [{"datasets":[],"id":82549,"numValue":55.85,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":82550,"numValue":52.7,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":82551,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":82552,"numValue":null,"references... | |||||||||||||||||||||||||
fireprotdb:8402 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,402 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 22,976 | ProTherm | 7 | DSC | Thermal | MOPS | 50 mM | null | 38.85 | null | null | null | 28 | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}] | [{"datasets":[],"id":82553,"numValue":38.85,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":82554,"numValue":28.0,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":82555,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":82556,"numValue":null,"references":... | |||||||||||||||||||||||||
fireprotdb:8403 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,403 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 22,977 | ProTherm | 7 | DSC | Thermal | MOPS | 50 mM | null | 52.85 | null | null | null | 60 | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}] | [{"datasets":[],"id":82557,"numValue":52.85,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":82558,"numValue":60.0,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":82559,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":82560,"numValue":null,"references":... | |||||||||||||||||||||||||
fireprotdb:8404 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,404 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 22,978 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | NaCl | 15 mM | 44.15 | null | null | null | null | null | 33.9 | null | null | null | null | null | null | null | null | null | yes | 3.0 | TM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"ION"},{"numValu... | [{"datasets":[],"id":82561,"numValue":44.15,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":82562,"numValue":33.9,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":82563,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":82564,"numValue":null,"references... | |||||||||||||||||||||||
fireprotdb:8405 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,405 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 22,979 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | NaCl | 15 mM | 55.85 | null | null | null | 52.7 | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | TM|DH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"ION"},{"numValu... | [{"datasets":[],"id":82565,"numValue":55.85,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":82566,"numValue":52.7,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":82567,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":82568,"numValue":null,"references":... | |||||||||||||||||||||||
fireprotdb:8406 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,406 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 23,223 | ProTherm | 7 | Fluorescence, CD | Thermal | Mops | 50 mM | null | NaCl | 0.5 M | 43.25 | null | null | null | null | null | 17.2 | null | null | null | null | null | null | null | null | null | Yes | TM|DHVH|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Fluorescence, CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"I... | [{"datasets":[],"id":83311,"numValue":43.25,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":83312,"numValue":17.2,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":83313,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | ||||||||||||||||||||||||
fireprotdb:8407 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,407 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 23,352 | ProTherm | 7 | Abs, CD, Fluorescence | Thermal | Mops | 5-50 mM | null | NaCl | 15 mM | 44.15 | null | null | null | null | null | 34.1 | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Abs, CD, Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"5-50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","t... | [{"datasets":[],"id":83653,"numValue":44.15,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":83654,"numValue":34.1,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":83655,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":83656,"numValue":null,"references... | |||||||||||||||||||||||
fireprotdb:8408 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,408 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 23,353 | ProTherm | 7 | Abs, CD, Fluorescence | Thermal | Mops | 5-50 mM | null | NaCl | 15 mM | 55.85 | null | null | null | null | null | 52.9 | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Abs, CD, Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"5-50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","t... | [{"datasets":[],"id":83657,"numValue":55.85,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":83658,"numValue":52.9,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":83659,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":83660,"numValue":null,"references... | |||||||||||||||||||||||
fireprotdb:8409 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,409 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 25,530 | ProTherm | 7 | Fluorescence | Urea | Mops | 50 mM | 25.2 | NaCl | 0.5 M | null | null | null | null | null | null | null | 0.65 | null | null | null | null | null | null | null | null | Yes | CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.2,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER... | [{"datasets":[],"id":89756,"numValue":0.65,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":89757,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | ||||||||||||||||||||||||
fireprotdb:8410 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,410 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 25,732 | ProTherm | 7 | Fluorescence | Urea | MOPS | 1 mM | 25 | null | null | 3.58 | null | null | null | null | 1.59 | 2.25 | null | null | null | null | null | null | null | yes | DG|M|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC | 1602 | ARTICLE | Salt-induced stabilization of apoflavodoxin at neutral pH is mediated through cation-specific effects. | 2,002 | 10.1110/ps.2980102 | 11967382 | Protein Sci;11;1260-73 | 7 | Maldonado Susana|Ir?n Mar?a Pilar|Campos Luis Alberto|Rubio Jos? Antonio|Luquita Alejandra|Lostao Anabel|Wang Renjie | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"1 mM","type":"BUFFER_... | [{"datasets":[],"id":90304,"numValue":3.58,"references":[],"strValue":null,"type":"DG"},{"datasets":[],"id":90305,"numValue":2.25,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":90306,"numValue":1.59,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":90307,"numValue":null,"references":[],"... | ||||||||||||||||||||||||||
fireprotdb:8411 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,411 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 25,733 | ProTherm | 7 | Fluorescence | Urea | MOPS | 1 mM | 25 | Chol Cl | 0.50 M | null | null | 4.91 | null | null | null | null | 2.18 | 2.25 | null | null | null | null | null | null | null | yes | DG|M|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC | 1602 | ARTICLE | Salt-induced stabilization of apoflavodoxin at neutral pH is mediated through cation-specific effects. | 2,002 | 10.1110/ps.2980102 | 11967382 | Protein Sci;11;1260-73 | 7 | Maldonado Susana|Ir?n Mar?a Pilar|Campos Luis Alberto|Rubio Jos? Antonio|Luquita Alejandra|Lostao Anabel|Wang Renjie | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"1 mM","type":"BUFFER_... | [{"datasets":[],"id":90308,"numValue":4.91,"references":[],"strValue":null,"type":"DG"},{"datasets":[],"id":90309,"numValue":2.25,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":90310,"numValue":2.18,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":90311,"numValue":null,"references":[],"... | ||||||||||||||||||||||||
fireprotdb:8413 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,413 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 25,735 | ProTherm | 7 | Fluorescence | Urea | MOPS | 1 mM | 25 | KCl | 0.50 M | null | null | 6.46 | null | null | null | null | 2.87 | 2.25 | null | null | null | null | null | null | null | yes | DG|M|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC | 1602 | ARTICLE | Salt-induced stabilization of apoflavodoxin at neutral pH is mediated through cation-specific effects. | 2,002 | 10.1110/ps.2980102 | 11967382 | Protein Sci;11;1260-73 | 7 | Maldonado Susana|Ir?n Mar?a Pilar|Campos Luis Alberto|Rubio Jos? Antonio|Luquita Alejandra|Lostao Anabel|Wang Renjie | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"1 mM","type":"BUFFER_... | [{"datasets":[],"id":90316,"numValue":6.46,"references":[],"strValue":null,"type":"DG"},{"datasets":[],"id":90317,"numValue":2.25,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":90318,"numValue":2.87,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":90319,"numValue":null,"references":[],"... | ||||||||||||||||||||||||
fireprotdb:8414 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,414 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 25,736 | ProTherm | 7 | Fluorescence | Urea | MOPS | 1 mM | 25 | MgCl2 | 0.16 M | null | null | 6.39 | null | null | null | null | 2.84 | 2.25 | null | null | null | null | null | null | null | yes | DG|M|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC | 1602 | ARTICLE | Salt-induced stabilization of apoflavodoxin at neutral pH is mediated through cation-specific effects. | 2,002 | 10.1110/ps.2980102 | 11967382 | Protein Sci;11;1260-73 | 7 | Maldonado Susana|Ir?n Mar?a Pilar|Campos Luis Alberto|Rubio Jos? Antonio|Luquita Alejandra|Lostao Anabel|Wang Renjie | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"1 mM","type":"BUFFER_... | [{"datasets":[],"id":90320,"numValue":6.39,"references":[],"strValue":null,"type":"DG"},{"datasets":[],"id":90321,"numValue":2.25,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":90322,"numValue":2.84,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":90323,"numValue":null,"references":[],"... | ||||||||||||||||||||||||
fireprotdb:8415 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,415 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 25,737 | ProTherm | 7 | Fluorescence | Urea | MOPS | 1 mM | 25 | CaCl2 | 0.16 M | null | null | 6.1 | null | null | null | null | 2.71 | 2.25 | null | null | null | null | null | null | null | yes | DG|M|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC | 1602 | ARTICLE | Salt-induced stabilization of apoflavodoxin at neutral pH is mediated through cation-specific effects. | 2,002 | 10.1110/ps.2980102 | 11967382 | Protein Sci;11;1260-73 | 7 | Maldonado Susana|Ir?n Mar?a Pilar|Campos Luis Alberto|Rubio Jos? Antonio|Luquita Alejandra|Lostao Anabel|Wang Renjie | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"1 mM","type":"BUFFER_... | [{"datasets":[],"id":90324,"numValue":6.1,"references":[],"strValue":null,"type":"DG"},{"datasets":[],"id":90325,"numValue":2.25,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":90326,"numValue":2.71,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":90327,"numValue":null,"references":[],"s... | ||||||||||||||||||||||||
fireprotdb:8416 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,416 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 26,022 | ProTherm | 7 | Fluorescence | Urea | MOPS | 50 mM | 25 | null | null | null | null | null | null | null | 2.07 | 2.44 | null | null | null | null | null | null | null | Yes | M|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER... | [{"datasets":[],"id":91436,"numValue":2.44,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":91437,"numValue":2.07,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":91438,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | ||||||||||||||||||||||||||
fireprotdb:8417 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,417 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 26,023 | ProTherm | 7 | CD | Urea | MOPS | 50 mM | 25 | NaCl | 15 mM | null | null | null | null | null | null | null | 2.07 | 2.44 | null | null | null | null | null | null | null | yes | M|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"... | [{"datasets":[],"id":91439,"numValue":2.44,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":91440,"numValue":2.07,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":91441,"numValue":null,"references":[],"strValue":"yes","type":"REVERSIBILITY"}] | ||||||||||||||||||||||||
fireprotdb:8418 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,418 | train | sequence | 158 | 158 | -1 | 170 | -1 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | 0 | 0 | 0 | 0 | -1 | null | null | false | false | null | null | 26,404 | ProTherm | 7 | Fluorescence | Urea | Mops | 50 mM | 25 | null | null | null | null | null | null | null | 2.07 | 2.44 | null | null | null | null | null | null | null | Yes | M|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER... | [{"datasets":[],"id":92628,"numValue":2.44,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":92629,"numValue":2.07,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":92630,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | ||||||||||||||||||||||||||
fireprotdb:8419 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,419 | train | mutant | 923 | 158 | 1,045 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | L7A | L7A | 1 | 1 | 0 | 0 | 7 | L | A | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 7 | A | E | false | false | 0 | 8.414375 | 1,659 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | NaCl | 15 mM | 1FTG_A:L6A | 32.35 | -11.8 | null | null | null | null | 28.7 | null | null | null | null | null | null | null | null | null | yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"ION"},{"numValu... | [{"datasets":[],"id":6154,"numValue":32.35,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6155,"numValue":-11.8,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6156,"numValue":28.7,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":6157,"numValue":3.0,"references":[],... | [{"id":9387,"numValue":8.0,"position":7,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8420 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,420 | train | mutant | 923 | 158 | 1,045 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | L7A | L7A | 1 | 1 | 0 | 0 | 7 | L | A | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 7 | A | E | false | false | 0 | 8.414375 | 1,677 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | NaCl | 15 mM | 1FTG_A:L6A | 45.95 | -9.9 | null | null | 23.8 | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | TM|DTM|DH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"ION"},{"numValu... | [{"datasets":[],"id":6244,"numValue":45.95,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6245,"numValue":-9.9,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6246,"numValue":23.8,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":6247,"numValue":3.0,"references":[],"st... | [{"id":9387,"numValue":8.0,"position":7,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8421 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,421 | train | mutant | 923 | 158 | 1,045 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | L7A | L7A | 1 | 1 | 0 | 0 | 7 | L | A | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 7 | A | E | false | false | 0 | 8.414375 | 7,922 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | NaCl | 15 mM | 1FTG_A:L6A | null | null | null | 1.11 | null | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | DDG|STATE|REVERSIBILITY | khan_protherm_data_mapped.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":["khan_protherm_data_mapped.csv"],"id":27072,"numValue":1.11,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27073,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27074,"numValue":null,"references":[],"strValue":"yes","type":"REVERSIBILITY"}] | [{"id":9387,"numValue":8.0,"position":7,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||
fireprotdb:8422 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,422 | train | mutant | 923 | 158 | 1,045 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | L7A | L7A | 1 | 1 | 0 | 0 | 7 | L | A | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 7 | A | E | false | false | 0 | 8.414375 | 7,940 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | NaCl | 15 mM | 1FTG_A:L6A | null | null | null | 1.74 | null | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":[],"id":27126,"numValue":1.74,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27127,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27128,"numValue":null,"references":[],"strValue":"yes","type":"REVERSIBILITY"}] | [{"id":9387,"numValue":8.0,"position":7,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8423 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,423 | train | mutant | 923 | 158 | 1,045 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | L7A | L7A | 1 | 1 | 0 | 0 | 7 | L | A | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 7 | A | E | false | false | 0 | 8.414375 | 9,318 | ProTherm | 7 | CD | Urea | MOPS | 50 mM | 25 | NaCl | 15 mM | 1FTG_A:L6A | null | null | null | 3.53 | null | null | null | 0.78 | 1.96 | null | null | null | null | null | null | null | yes | DDG|M|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"... | [{"datasets":[],"id":31798,"numValue":3.53,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":31799,"numValue":1.96,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":31800,"numValue":0.78,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":31801,"numValue":null,"references":[],... | [{"id":9387,"numValue":8.0,"position":7,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8424 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,424 | train | mutant | 4,672 | 158 | 5,208 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | F8L | F8L | 1 | 1 | 0 | 0 | 8 | F | L | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 8 | A | E | true | false | 0.125483 | 6.466364 | 10,977 | ProTherm | 6 | Fluorescence | Urea | MES | 375 mM | 25 | 1FLV_A:F7L | null | null | null | 0.04 | null | null | null | 2.39 | null | null | null | null | null | null | null | null | Unknown | DDG|CM|REVERSIBILITY | SAAFEC_S1262.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 734 | ARTICLE | Energetics of a hydrogen bond (charged and neutral) and of a cation-pi interaction in apoflavodoxin. | 1,999 | 10.1006/jmbi.1999.2863 | 10388575 | J Mol Biol;290;319-30 | 3 | Sancho J|Romero A|Fern?ndez-Recio J | [{"numValue":6.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"MES","type":"BUFFER"},{"numValue":null,"strValue":"375 mM","type":"BUFFER... | [{"datasets":["SAAFEC_S1262.csv"],"id":37842,"numValue":0.04,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":37843,"numValue":2.39,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":37844,"numValue":null,"references":[],"strValue":"Unknown","type":"REVERSIBILITY"}] | [{"id":9388,"numValue":8.0,"position":8,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8425 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,425 | train | mutant | 4,672 | 158 | 5,208 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | F8L | F8L | 1 | 1 | 0 | 0 | 8 | F | L | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 8 | A | E | true | false | 0.125483 | 6.466364 | 10,980 | ProTherm | 8.5 | Fluorescence | Urea | Tris | 583 mM | 25 | 1FLV_A:F7L | null | null | null | -0.23 | null | null | null | 1.87 | null | null | null | null | null | null | null | null | Unknown | DDG|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 734 | ARTICLE | Energetics of a hydrogen bond (charged and neutral) and of a cation-pi interaction in apoflavodoxin. | 1,999 | 10.1006/jmbi.1999.2863 | 10388575 | J Mol Biol;290;319-30 | 3 | Sancho J|Romero A|Fern?ndez-Recio J | [{"numValue":8.5,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"Tris","type":"BUFFER"},{"numValue":null,"strValue":"583 mM","type":"BUFFE... | [{"datasets":[],"id":37851,"numValue":-0.23,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":37852,"numValue":1.87,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":37853,"numValue":null,"references":[],"strValue":"Unknown","type":"REVERSIBILITY"}] | [{"id":9388,"numValue":8.0,"position":8,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||||
fireprotdb:8426 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,426 | train | mutant | 7,141 | 158 | 7,796 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | H35A|F8L | H35A|F8L | 2 | 2 | 0 | 0 | 35 | H | A | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 8|35 | A | E | true | false | 21.024636 | 8.065682 | 15,381 | ProTherm | 6 | Fluorescence | Urea | MES | 375 mM | 25 | 1FLV_A:F7L 1FLV_A:H34A | null | null | null | 0.71 | null | null | null | 2.05 | null | null | null | null | null | null | null | null | Unknown | DDG|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 734 | ARTICLE | Energetics of a hydrogen bond (charged and neutral) and of a cation-pi interaction in apoflavodoxin. | 1,999 | 10.1006/jmbi.1999.2863 | 10388575 | J Mol Biol;290;319-30 | 3 | Sancho J|Romero A|Fern?ndez-Recio J | [{"numValue":6.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"MES","type":"BUFFER"},{"numValue":null,"strValue":"375 mM","type":"BUFFER... | [{"datasets":[],"id":56460,"numValue":0.71,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":56461,"numValue":2.05,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":56462,"numValue":null,"references":[],"strValue":"Unknown","type":"REVERSIBILITY"}] | [{"id":9388,"numValue":8.0,"position":8,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"},{"id":9415,"numValue":3.0,"position":35,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||||
fireprotdb:8427 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,427 | train | mutant | 7,141 | 158 | 7,796 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | H35A|F8L | H35A|F8L | 2 | 2 | 0 | 0 | 35 | H | A | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 8|35 | A | E | true | false | 21.024636 | 8.065682 | 15,383 | ProTherm | 8.5 | Fluorescence | Urea | Tris | 583 mM | 25 | 1FLV_A:F7L 1FLV_A:H34A | null | null | null | 1.64 | null | null | null | 1.15 | null | null | null | null | null | null | null | null | Unknown | DDG|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 734 | ARTICLE | Energetics of a hydrogen bond (charged and neutral) and of a cation-pi interaction in apoflavodoxin. | 1,999 | 10.1006/jmbi.1999.2863 | 10388575 | J Mol Biol;290;319-30 | 3 | Sancho J|Romero A|Fern?ndez-Recio J | [{"numValue":8.5,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"Tris","type":"BUFFER"},{"numValue":null,"strValue":"583 mM","type":"BUFFE... | [{"datasets":[],"id":56466,"numValue":1.64,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":56467,"numValue":1.15,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":56468,"numValue":null,"references":[],"strValue":"Unknown","type":"REVERSIBILITY"}] | [{"id":9388,"numValue":8.0,"position":8,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"},{"id":9415,"numValue":3.0,"position":35,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||||
fireprotdb:8428 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,428 | train | mutant | 1,105 | 158 | 1,246 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V19I | V19I | 1 | 1 | 0 | 0 | 19 | V | I | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 19 | A | H | true | false | 2.754604 | 13.645 | 1,982 | ProTherm | 7 | Fluorescence, CD | Thermal | Mops | 50 mM | null | NaCl | 0.5 M | 1FTG_A:V18I | 48.15 | 4.9 | null | null | null | null | 13.6 | null | null | null | null | null | null | null | null | null | Yes | TM|DTM|DHVH|REVERSIBILITY | AUTOMUTE_S1925.csv|I_Mutant2.0_S1948.csv|I_Mutant2.0_S2087.csv|iPTREE-STAB_S1859.csv|M47andM8_S1810.csv|M47andM8_S2760.csv|SVM-WIN31_SVM-3D12_S1634.csv|SVM-WIN31_SVM-3D12_S1681.csv|Saraboji_S1396.csv | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Fluorescence, CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"I... | [{"datasets":["AUTOMUTE_S1925.csv","I_Mutant2.0_S1948.csv","I_Mutant2.0_S2087.csv","iPTREE-STAB_S1859.csv","M47andM8_S1810.csv","M47andM8_S2760.csv","SVM-WIN31_SVM-3D12_S1634.csv","SVM-WIN31_SVM-3D12_S1681.csv"],"id":7370,"numValue":48.15,"references":[],"strValue":null,"type":"TM"},{"datasets":["AUTOMUTE_S1925.csv","I... | [{"id":9399,"numValue":6.0,"position":19,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8429 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,429 | train | mutant | 1,105 | 158 | 1,246 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V19I | V19I | 1 | 1 | 0 | 0 | 19 | V | I | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 19 | A | H | true | false | 2.754604 | 13.645 | 2,357 | ProTherm | 7 | Abs, CD, Fluorescence | Thermal | Mops | 5-50 mM | null | NaCl | 15 mM | 1FLV_A:V18I | 44.85 | 0.7 | null | null | null | null | 35.9 | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | AUTOMUTE_S1962.csv|Broom_S605.csv|Saraboji_S2204.csv|STRUM_Q3421.csv | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Abs, CD, Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"5-50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","t... | [{"datasets":["AUTOMUTE_S1962.csv","Broom_S605.csv","Saraboji_S2204.csv","STRUM_Q3421.csv"],"id":8618,"numValue":44.85,"references":[],"strValue":null,"type":"TM"},{"datasets":["AUTOMUTE_S1962.csv","Broom_S605.csv","Saraboji_S2204.csv","STRUM_Q3421.csv"],"id":8619,"numValue":0.7,"references":[],"strValue":null,"type":"... | [{"id":9399,"numValue":6.0,"position":19,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||
fireprotdb:8430 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,430 | train | mutant | 1,105 | 158 | 1,246 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V19I | V19I | 1 | 1 | 0 | 0 | 19 | V | I | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 19 | A | H | true | false | 2.754604 | 13.645 | 2,360 | ProTherm | 7 | Abs, CD, Fluorescence | Thermal | Mops | 5-50 mM | null | NaCl | 15 mM | 1FLV_A:V18I | 57.15 | 1.3 | null | null | null | null | 59 | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Abs, CD, Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"5-50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","t... | [{"datasets":[],"id":8633,"numValue":57.15,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":8634,"numValue":1.3,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":8635,"numValue":59.0,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":8636,"numValue":3.0,"references":[],"s... | [{"id":9399,"numValue":6.0,"position":19,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8431 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,431 | train | mutant | 1,105 | 158 | 1,246 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V19I | V19I | 1 | 1 | 0 | 0 | 19 | V | I | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 19 | A | H | true | false | 2.754604 | 13.645 | 7,958 | ProTherm | 7 | Abs, CD, Fluorescence | Thermal | Mops | 5-50 mM | 44.3 | NaCl | 15 mM | 1FLV_A:V18I | null | null | null | -0.08 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | khan_protherm_data_mapped.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Abs, CD, Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"5-50 mM",... | [{"datasets":["khan_protherm_data_mapped.csv"],"id":27180,"numValue":-0.08,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27181,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27182,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9399,"numValue":6.0,"position":19,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||
fireprotdb:8432 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,432 | train | mutant | 1,105 | 158 | 1,246 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V19I | V19I | 1 | 1 | 0 | 0 | 19 | V | I | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 19 | A | H | true | false | 2.754604 | 13.645 | 7,961 | ProTherm | 7 | Abs, CD, Fluorescence | Thermal | Mops | 5-50 mM | 44.3 | NaCl | 15 mM | 1FLV_A:V18I | null | null | null | -0.44 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Abs, CD, Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"5-50 mM",... | [{"datasets":[],"id":27189,"numValue":-0.44,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27190,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27191,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9399,"numValue":6.0,"position":19,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8433 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,433 | train | mutant | 1,105 | 158 | 1,246 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V19I | V19I | 1 | 1 | 0 | 0 | 19 | V | I | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 19 | A | H | true | false | 2.754604 | 13.645 | 7,963 | ProTherm | 7 | Abs, CD, Fluorescence | Thermal | Mops | 5-50 mM | 44.3 | NaCl | 15 mM | 1FLV_A:V18I | null | null | null | -0.52 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | DDG|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Abs, CD, Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"5-50 mM",... | [{"datasets":[],"id":27195,"numValue":-0.52,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27196,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9399,"numValue":6.0,"position":19,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8434 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,434 | train | mutant | 1,105 | 158 | 1,246 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V19I | V19I | 1 | 1 | 0 | 0 | 19 | V | I | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 19 | A | H | true | false | 2.754604 | 13.645 | 7,993 | ProTherm | 7 | Fluorescence, CD | Thermal | Mops | 50 mM | 43.4 | NaCl | 0.5 M | 1FTG_A:V18I | null | null | null | -0.19 | null | 0.34 | null | null | null | null | null | null | null | null | null | null | Yes | DCP|DDG|REVERSIBILITY | khan_protherm_data_mapped.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":43.4,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence, CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":... | [{"datasets":[],"id":27282,"numValue":0.34,"references":[],"strValue":null,"type":"DCP"},{"datasets":["khan_protherm_data_mapped.csv"],"id":27283,"numValue":-0.19,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27284,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9399,"numValue":6.0,"position":19,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8435 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,435 | train | mutant | 1,105 | 158 | 1,246 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V19I | V19I | 1 | 1 | 0 | 0 | 19 | V | I | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 19 | A | H | true | false | 2.754604 | 13.645 | 8,478 | ProTherm | 7 | Fluorescence | Urea | Mops | 50 mM | 25.2 | NaCl | 0.5 M | 1FTG_A:V18I | null | null | null | -0.27 | null | null | null | 1.04 | null | null | null | null | null | null | null | null | Yes | DDG|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.2,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER... | [{"datasets":[],"id":28839,"numValue":-0.27,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":28840,"numValue":1.04,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":28841,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9399,"numValue":6.0,"position":19,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8436 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,436 | train | mutant | 1,105 | 158 | 1,246 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V19I | V19I | 1 | 1 | 0 | 0 | 19 | V | I | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 19 | A | H | true | false | 2.754604 | 13.645 | 9,926 | ProTherm | 7 | Fluorescence | Urea | Mops | 50 mM | 25 | 1FLV_A:V18I | null | null | null | -1.03 | null | null | null | 2.35 | 2.59 | null | null | null | null | null | null | null | Yes | DDG|M|CM|REVERSIBILITY | SAAFEC_S1262.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER... | [{"datasets":["SAAFEC_S1262.csv"],"id":34105,"numValue":-1.03,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":34106,"numValue":2.59,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":34107,"numValue":2.35,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":34108,"numValue":nu... | [{"id":9399,"numValue":6.0,"position":19,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8437 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,437 | train | mutant | 1,200 | 158 | 1,346 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V19L | V19L | 1 | 1 | 0 | 0 | 19 | V | L | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 19 | A | H | true | false | 2.754604 | 13.645 | 2,358 | ProTherm | 7 | Abs, CD, Fluorescence | Thermal | Mops | 5-50 mM | null | NaCl | 15 mM | 1FLV_A:V18L | 44.55 | 0.4 | null | null | null | null | 36.8 | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | AUTOMUTE_S1962.csv|Broom_S605.csv|Saraboji_S2204.csv|STRUM_Q3421.csv|AUTOMUTE_S1925.csv|EASE-MM_S1676.csv|I_Mutant2.0_S1948.csv|I_Mutant2.0_S2087.csv|iPTREE-STAB_S1859.csv|M47andM8_S2760.csv|PON-TStab_dataset.csv|Saraboji_S1396.csv|SVM-WIN31_SVM-3D12_S1634.csv|SVM-WIN31_SVM-3D12_S1681.csv|HotMuSiC_S1626.csv|M47andM8_S1... | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Abs, CD, Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"5-50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","t... | [{"datasets":["AUTOMUTE_S1962.csv","Broom_S605.csv","Saraboji_S2204.csv","STRUM_Q3421.csv"],"id":8623,"numValue":44.55,"references":[],"strValue":null,"type":"TM"},{"datasets":["AUTOMUTE_S1925.csv","EASE-MM_S1676.csv","I_Mutant2.0_S1948.csv","I_Mutant2.0_S2087.csv","iPTREE-STAB_S1859.csv","M47andM8_S2760.csv","PON-TSta... | [{"id":9399,"numValue":6.0,"position":19,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||
fireprotdb:8438 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,438 | train | mutant | 1,200 | 158 | 1,346 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V19L | V19L | 1 | 1 | 0 | 0 | 19 | V | L | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 19 | A | H | true | false | 2.754604 | 13.645 | 2,361 | ProTherm | 7 | Abs, CD, Fluorescence | Thermal | Mops | 5-50 mM | null | NaCl | 15 mM | 1FLV_A:V18L | 56.35 | 0.5 | null | null | null | null | 52 | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | Broom_S605.csv|EASE-MM_S543.csv|PoPMuSiC-2.0_S2648.csv | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Abs, CD, Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"5-50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","t... | [{"datasets":[],"id":8638,"numValue":56.35,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":8639,"numValue":0.5,"references":[],"strValue":null,"type":"DTM"},{"datasets":["Broom_S605.csv","EASE-MM_S543.csv","PoPMuSiC-2.0_S2648.csv"],"id":8640,"numValue":52.0,"references":[],"strValue":null,"type":"DHVH"... | [{"id":9399,"numValue":6.0,"position":19,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||
fireprotdb:8439 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,439 | train | mutant | 1,200 | 158 | 1,346 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V19L | V19L | 1 | 1 | 0 | 0 | 19 | V | L | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 19 | A | H | true | false | 2.754604 | 13.645 | 7,959 | ProTherm | 7 | Abs, CD, Fluorescence | Thermal | Mops | 5-50 mM | 44.3 | NaCl | 15 mM | 1FLV_A:V18L | null | null | null | -0.04 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | khan_protherm_data_mapped.csv|potapov_with_uniprot_mapping.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Abs, CD, Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"5-50 mM",... | [{"datasets":["khan_protherm_data_mapped.csv","potapov_with_uniprot_mapping.csv"],"id":27183,"numValue":-0.04,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27184,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27185,"numValue":null,"references":[],"strValue":"Yes",... | [{"id":9399,"numValue":6.0,"position":19,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||
fireprotdb:8440 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,440 | train | mutant | 1,200 | 158 | 1,346 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V19L | V19L | 1 | 1 | 0 | 0 | 19 | V | L | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 19 | A | H | true | false | 2.754604 | 13.645 | 7,964 | ProTherm | 7 | Abs, CD, Fluorescence | Thermal | Mops | 5-50 mM | 44.3 | NaCl | 15 mM | 1FLV_A:V18L | null | null | null | -0.09 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | DDG|REVERSIBILITY | potapov_with_uniprot_mapping.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Abs, CD, Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"5-50 mM",... | [{"datasets":["potapov_with_uniprot_mapping.csv"],"id":27197,"numValue":-0.09,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27198,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9399,"numValue":6.0,"position":19,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8441 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,441 | train | mutant | 1,200 | 158 | 1,346 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V19L | V19L | 1 | 1 | 0 | 0 | 19 | V | L | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 19 | A | H | true | false | 2.754604 | 13.645 | 9,927 | ProTherm | 7 | Fluorescence | Urea | Mops | 50 mM | 25 | 1FLV_A:V18L | null | null | null | -0.6 | null | null | null | 2.15 | 2.63 | null | null | null | null | null | null | null | Yes | DDG|M|CM|REVERSIBILITY | SAAFEC_S1262.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 222 | ARTICLE | Filling small, empty protein cavities: structural and energetic consequences. | 2,006 | 10.1016/j.jmb.2006.02.060 | 16563433 | J Mol Biol;358;701-12 | 4 | Sancho Javier|Bueno Marta|Cremades Nunilo|Neira Jos? Luis | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER... | [{"datasets":["SAAFEC_S1262.csv"],"id":34109,"numValue":-0.6,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":34110,"numValue":2.63,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":34111,"numValue":2.15,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":34112,"numValue":nul... | [{"id":9399,"numValue":6.0,"position":19,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8442 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,442 | train | mutant | 916 | 158 | 1,038 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E21K | E21K | 1 | 1 | 0 | 0 | 21 | E | K | 4 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 21 | A | H | false | false | 74.739736 | 13.650555 | 1,632 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | 1FTG_A:E20K | 42.65 | -1.5 | null | null | null | null | 30.2 | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1FTG_A:E20K","type":"_PDB_CHA... | [{"datasets":[],"id":6019,"numValue":42.65,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6020,"numValue":-1.5,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6021,"numValue":30.2,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":6022,"numValue":3.0,"references":[],"... | [{"id":9401,"numValue":4.0,"position":21,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8443 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,443 | train | mutant | 916 | 158 | 1,038 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E21K | E21K | 1 | 1 | 0 | 0 | 21 | E | K | 4 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 21 | A | H | false | false | 74.739736 | 13.650555 | 1,640 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | 1FTG_A:E20K | 59.65 | 3.8 | null | null | null | null | 66.1 | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1FTG_A:E20K","type":"_PDB_CHA... | [{"datasets":[],"id":6059,"numValue":59.65,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6060,"numValue":3.8,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6061,"numValue":66.1,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":6062,"numValue":3.0,"references":[],"s... | [{"id":9401,"numValue":4.0,"position":21,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8444 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,444 | train | mutant | 916 | 158 | 1,038 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E21K | E21K | 1 | 1 | 0 | 0 | 21 | E | K | 4 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 21 | A | H | false | false | 74.739736 | 13.650555 | 1,648 | ProTherm | 7 | DSC | Thermal | MOPS | 50 mM | null | 1FTG_A:E20K | 36.15 | -2.7 | null | null | 22 | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DTM|DH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1FTG_A:E20K","type":"_PDB_CH... | [{"datasets":[],"id":6099,"numValue":36.15,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6100,"numValue":-2.7,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6101,"numValue":22.0,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":6102,"numValue":3.0,"references":[],"st... | [{"id":9401,"numValue":4.0,"position":21,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8445 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,445 | train | mutant | 916 | 158 | 1,038 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E21K | E21K | 1 | 1 | 0 | 0 | 21 | E | K | 4 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 21 | A | H | false | false | 74.739736 | 13.650555 | 1,653 | ProTherm | 7 | DSC | Thermal | MOPS | 50 mM | null | 1FTG_A:E20K | 58.05 | 5.2 | null | null | 66.2 | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | TM|DTM|DH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"1FTG_A:E20K","type":"_PDB_CH... | [{"datasets":[],"id":6124,"numValue":58.05,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6125,"numValue":5.2,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6126,"numValue":66.2,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":6127,"numValue":3.0,"references":[],"str... | [{"id":9401,"numValue":4.0,"position":21,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8446 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,446 | train | mutant | 916 | 158 | 1,038 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E21K | E21K | 1 | 1 | 0 | 0 | 21 | E | K | 4 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 21 | A | H | false | false | 74.739736 | 13.650555 | 1,983 | ProTherm | 7 | Fluorescence, CD | Thermal | Mops | 50 mM | null | NaCl | 0.5 M | 1FTG_A:E20K | 48.25 | 5 | null | null | null | null | 18.1 | null | null | null | null | null | null | null | null | null | Yes | TM|DTM|DHVH|REVERSIBILITY | AUTOMUTE_S1925.csv|I_Mutant2.0_S1948.csv|I_Mutant2.0_S2087.csv|iPTREE-STAB_S1859.csv|M47andM8_S1810.csv|M47andM8_S2760.csv|Saraboji_S1396.csv|SVM-WIN31_SVM-3D12_S1634.csv|SVM-WIN31_SVM-3D12_S1681.csv|EASE-MM_S1676.csv|PON-TStab_dataset.csv | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Fluorescence, CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"I... | [{"datasets":["AUTOMUTE_S1925.csv","I_Mutant2.0_S1948.csv","I_Mutant2.0_S2087.csv","iPTREE-STAB_S1859.csv","M47andM8_S1810.csv","M47andM8_S2760.csv","Saraboji_S1396.csv","SVM-WIN31_SVM-3D12_S1634.csv","SVM-WIN31_SVM-3D12_S1681.csv"],"id":7374,"numValue":48.25,"references":[],"strValue":null,"type":"TM"},{"datasets":["A... | [{"id":9401,"numValue":4.0,"position":21,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8447 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,447 | train | mutant | 916 | 158 | 1,038 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E21K | E21K | 1 | 1 | 0 | 0 | 21 | E | K | 4 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 21 | A | H | false | false | 74.739736 | 13.650555 | 7,880 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:E20K | null | null | null | -0.14 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | khan_protherm_data_mapped.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":["khan_protherm_data_mapped.csv"],"id":26946,"numValue":-0.14,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":26947,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":26948,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9401,"numValue":4.0,"position":21,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8448 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,448 | train | mutant | 916 | 158 | 1,038 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E21K | E21K | 1 | 1 | 0 | 0 | 21 | E | K | 4 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 21 | A | H | false | false | 74.739736 | 13.650555 | 7,888 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:E20K | null | null | null | 1.2 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":[],"id":26970,"numValue":1.2,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":26971,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":26972,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9401,"numValue":4.0,"position":21,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8450 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,450 | train | mutant | 916 | 158 | 1,038 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E21K | E21K | 1 | 1 | 0 | 0 | 21 | E | K | 4 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 21 | A | H | false | false | 74.739736 | 13.650555 | 7,904 | ProTherm | 7 | DSC | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:E20K | null | null | null | -0.24 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"... | [{"datasets":[],"id":27018,"numValue":-0.24,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27019,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27020,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9401,"numValue":4.0,"position":21,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8451 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,451 | train | mutant | 916 | 158 | 1,038 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E21K | E21K | 1 | 1 | 0 | 0 | 21 | E | K | 4 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 21 | A | H | false | false | 74.739736 | 13.650555 | 7,910 | ProTherm | 7 | DSC | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:E20K | null | null | null | 0.95 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"... | [{"datasets":[],"id":27036,"numValue":0.95,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27037,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27038,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9401,"numValue":4.0,"position":21,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8452 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,452 | train | mutant | 916 | 158 | 1,038 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E21K | E21K | 1 | 1 | 0 | 0 | 21 | E | K | 4 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 21 | A | H | false | false | 74.739736 | 13.650555 | 7,916 | ProTherm | 7 | DSC | Thermal | MOPS | 50 mM | 44.3 | 1FTG_A:E20K | null | null | null | 0.71 | null | null | null | null | null | null | null | null | null | null | null | null | Yes | 3.0 | DDG|STATE|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"DSC","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"... | [{"datasets":[],"id":27054,"numValue":0.71,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27055,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27056,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9401,"numValue":4.0,"position":21,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||||
fireprotdb:8454 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,454 | train | mutant | 916 | 158 | 1,038 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E21K | E21K | 1 | 1 | 0 | 0 | 21 | E | K | 4 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 21 | A | H | false | false | 74.739736 | 13.650555 | 8,479 | ProTherm | 7 | Fluorescence | Urea | Mops | 50 mM | 25.2 | NaCl | 0.5 M | 1FTG_A:E20K | null | null | null | -0.28 | null | null | null | 1.06 | null | null | null | null | null | null | null | null | Yes | DDG|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.2,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER... | [{"datasets":[],"id":28842,"numValue":-0.28,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":28843,"numValue":1.06,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":28844,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9401,"numValue":4.0,"position":21,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8455 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,455 | train | mutant | 916 | 158 | 1,038 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E21K | E21K | 1 | 1 | 0 | 0 | 21 | E | K | 4 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 21 | A | H | false | false | 74.739736 | 13.650555 | 9,303 | ProTherm | 7 | Fluorescence | Urea | MOPS | 50 mM | 25 | 1FTG_A:E20K | null | null | null | -1.6 | null | null | null | 2.56 | 2.58 | null | null | null | null | null | null | null | Yes | DDG|M|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 24 | ARTICLE | Do proteins always benefit from a stability increase? Relevant and residual stabilisation in a three-state protein by charge optimisation. | 2,004 | 10.1016/j.jmb.2004.09.047 | 15504413 | J Mol Biol;344;223-37 | 5 | Campos Luis A|Garcia-Mira Maria M|Godoy-Ruiz Raquel|Sanchez-Ruiz Jose M|Sancho Javier | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER... | [{"datasets":[],"id":31738,"numValue":-1.6,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":31739,"numValue":2.58,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":31740,"numValue":2.56,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":31741,"numValue":null,"references":[],... | [{"id":9401,"numValue":4.0,"position":21,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||||
fireprotdb:8456 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,456 | train | mutant | 7,501 | 158 | 8,185 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E21K|E73K | E21K|E73K | 2 | 2 | 0 | 0 | 21 | E | K | 4 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 21|73 | A | H|T | true | false | 77.360675 | 17.278611 | 15,934 | ProTherm | 7 | Fluorescence, CD | Thermal | Mops | 50 mM | null | NaCl | 0.5 M | 1FTG_A:E20K 1FTG_A:E72K | 52.75 | 9.5 | null | null | null | null | 18.9 | null | null | null | null | null | null | null | null | null | Yes | TM|DTM|DHVH|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Fluorescence, CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"I... | [{"datasets":[],"id":58518,"numValue":52.75,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":58519,"numValue":9.5,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":58520,"numValue":18.9,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":58521,"numValue":null,"references":... | [{"id":9401,"numValue":4.0,"position":21,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"},{"id":9453,"numValue":3.0,"position":73,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8457 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,457 | train | mutant | 7,501 | 158 | 8,185 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E21K|E73K | E21K|E73K | 2 | 2 | 0 | 0 | 21 | E | K | 4 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 21|73 | A | H|T | true | false | 77.360675 | 17.278611 | 16,797 | ProTherm | 7 | Fluorescence, CD | Thermal | Mops | 50 mM | 43.4 | NaCl | 0.5 M | 1FTG_A:E20K 1FTG_A:E72K | null | null | null | -0.5 | null | 0.34 | null | null | null | null | null | null | null | null | null | null | Yes | DCP|DDG|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":43.4,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence, CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":... | [{"datasets":[],"id":61726,"numValue":0.34,"references":[],"strValue":null,"type":"DCP"},{"datasets":[],"id":61727,"numValue":-0.5,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":61728,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9401,"numValue":4.0,"position":21,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"},{"id":9453,"numValue":3.0,"position":73,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8458 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,458 | train | mutant | 7,501 | 158 | 8,185 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | E21K|E73K | E21K|E73K | 2 | 2 | 0 | 0 | 21 | E | K | 4 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 21|73 | A | H|T | true | false | 77.360675 | 17.278611 | 16,863 | ProTherm | 7 | Fluorescence | Urea | Mops | 50 mM | 25.2 | NaCl | 0.5 M | 1FTG_A:E20K 1FTG_A:E72K | null | null | null | -0.35 | null | null | null | 1.15 | null | null | null | null | null | null | null | null | Yes | DDG|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.2,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER... | [{"datasets":[],"id":61958,"numValue":-0.35,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":61959,"numValue":1.15,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":61960,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9401,"numValue":4.0,"position":21,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"},{"id":9453,"numValue":3.0,"position":73,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8459 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,459 | train | mutant | 924 | 158 | 1,046 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | I23V | I23V | 1 | 1 | 0 | 0 | 23 | I | V | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 23 | A | H | true | false | 0 | 7.449375 | 1,660 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | NaCl | 15 mM | 1FTG_A:I22V | 37.85 | -6.3 | null | null | null | null | 33 | null | null | null | null | null | null | null | null | null | yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"ION"},{"numValu... | [{"datasets":[],"id":6159,"numValue":37.85,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6160,"numValue":-6.3,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6161,"numValue":33.0,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":6162,"numValue":3.0,"references":[],"... | [{"id":9403,"numValue":8.0,"position":23,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8460 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,460 | train | mutant | 924 | 158 | 1,046 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | I23V | I23V | 1 | 1 | 0 | 0 | 23 | I | V | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 23 | A | H | true | false | 0 | 7.449375 | 1,678 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | NaCl | 15 mM | 1FTG_A:I22V | 51.55 | -4.3 | null | null | 37.3 | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | TM|DTM|DH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"ION"},{"numValu... | [{"datasets":[],"id":6249,"numValue":51.55,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6250,"numValue":-4.3,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6251,"numValue":37.3,"references":[],"strValue":null,"type":"DH"},{"datasets":[],"id":6252,"numValue":3.0,"references":[],"st... | [{"id":9403,"numValue":8.0,"position":23,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8461 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,461 | train | mutant | 924 | 158 | 1,046 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | I23V | I23V | 1 | 1 | 0 | 0 | 23 | I | V | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 23 | A | H | true | false | 0 | 7.449375 | 9,319 | ProTherm | 7 | CD | Urea | MOPS | 50 mM | 25 | NaCl | 15 mM | 1FTG_A:I22V | null | null | null | 1.94 | null | null | null | 1.46 | 2.13 | null | null | null | null | null | null | null | yes | DDG|M|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.0,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"... | [{"datasets":[],"id":31802,"numValue":1.94,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":31803,"numValue":2.13,"references":[],"strValue":null,"type":"M"},{"datasets":[],"id":31804,"numValue":1.46,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":31805,"numValue":null,"references":[],... | [{"id":9403,"numValue":8.0,"position":23,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8462 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,462 | train | mutant | 1,106 | 158 | 1,247 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | I23A | I23A | 1 | 1 | 0 | 0 | 23 | I | A | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 23 | A | H | true | false | 0 | 7.449375 | 1,984 | ProTherm | 7 | Fluorescence, CD | Thermal | Mops | 50 mM | null | NaCl | 0.5 M | 1FTG_A:I22A | 42.75 | -0.5 | null | null | null | null | 13.1 | null | null | null | null | null | null | null | null | null | Yes | TM|DTM|DHVH|REVERSIBILITY | AUTOMUTE_S1925.csv|I_Mutant2.0_S1948.csv|I_Mutant2.0_S2087.csv|iPTREE-STAB_S1859.csv|M47andM8_S1810.csv|M47andM8_S2760.csv|PON-TStab_dataset.csv|Saraboji_S1396.csv|SVM-WIN31_SVM-3D12_S1634.csv|SVM-WIN31_SVM-3D12_S1681.csv|EASE-MM_S1676.csv|HotMuSiC_S1626.csv | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Fluorescence, CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"I... | [{"datasets":["AUTOMUTE_S1925.csv","I_Mutant2.0_S1948.csv","I_Mutant2.0_S2087.csv","iPTREE-STAB_S1859.csv","M47andM8_S1810.csv","M47andM8_S2760.csv","PON-TStab_dataset.csv","Saraboji_S1396.csv","SVM-WIN31_SVM-3D12_S1634.csv","SVM-WIN31_SVM-3D12_S1681.csv"],"id":7378,"numValue":42.75,"references":[],"strValue":null,"typ... | [{"id":9403,"numValue":8.0,"position":23,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8463 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,463 | train | mutant | 1,106 | 158 | 1,247 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | I23A | I23A | 1 | 1 | 0 | 0 | 23 | I | A | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 23 | A | H | true | false | 0 | 7.449375 | 7,923 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | 44.3 | NaCl | 15 mM | 1FTG_A:I22A | null | null | null | 0.67 | null | null | null | null | null | null | null | null | null | null | null | null | yes | 3.0 | DDG|STATE|REVERSIBILITY | khan_protherm_data_mapped.csv | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":44.3,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"}... | [{"datasets":["khan_protherm_data_mapped.csv"],"id":27075,"numValue":0.67,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27076,"numValue":3.0,"references":[],"strValue":null,"type":"STATE"},{"datasets":[],"id":27077,"numValue":null,"references":[],"strValue":"yes","type":"REVERSIBILITY"}] | [{"id":9403,"numValue":8.0,"position":23,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||
fireprotdb:8465 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,465 | train | mutant | 1,106 | 158 | 1,247 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | I23A | I23A | 1 | 1 | 0 | 0 | 23 | I | A | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 23 | A | H | true | false | 0 | 7.449375 | 7,995 | ProTherm | 7 | Fluorescence, CD | Thermal | Mops | 50 mM | 43.4 | NaCl | 0.5 M | 1FTG_A:I22A | null | null | null | 0.02 | null | 0.34 | null | null | null | null | null | null | null | null | null | null | Yes | DCP|DDG|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":43.4,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence, CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":... | [{"datasets":[],"id":27288,"numValue":0.34,"references":[],"strValue":null,"type":"DCP"},{"datasets":[],"id":27289,"numValue":0.02,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27290,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9403,"numValue":8.0,"position":23,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8466 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,466 | train | mutant | 1,106 | 158 | 1,247 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | I23A | I23A | 1 | 1 | 0 | 0 | 23 | I | A | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 23 | A | H | true | false | 0 | 7.449375 | 8,480 | ProTherm | 7 | Fluorescence | Urea | Mops | 50 mM | 25.2 | NaCl | 0.5 M | 1FTG_A:I22A | null | null | null | 0.02 | null | null | null | 0.62 | null | null | null | null | null | null | null | null | Yes | DDG|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.2,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER... | [{"datasets":[],"id":28845,"numValue":0.02,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":28846,"numValue":0.62,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":28847,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9403,"numValue":8.0,"position":23,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8467 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,467 | train | mutant | 1,107 | 158 | 1,248 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | I23G | I23G | 1 | 1 | 0 | 0 | 23 | I | G | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 23 | A | H | true | false | 0 | 7.449375 | 1,985 | ProTherm | 7 | Fluorescence, CD | Thermal | Mops | 50 mM | null | NaCl | 0.5 M | 1FTG_A:I22G | 47.05 | 3.8 | null | null | null | null | 14.6 | null | null | null | null | null | null | null | null | null | Yes | TM|DTM|DHVH|REVERSIBILITY | AUTOMUTE_S1925.csv|EASE-MM_S1676.csv|HotMuSiC_S1626.csv|I_Mutant2.0_S1948.csv|I_Mutant2.0_S2087.csv|iPTREE-STAB_S1859.csv|M47andM8_S1810.csv|M47andM8_S2760.csv|PON-TStab_dataset.csv|Saraboji_S1396.csv|SVM-WIN31_SVM-3D12_S1634.csv|SVM-WIN31_SVM-3D12_S1681.csv | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"Fluorescence, CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"I... | [{"datasets":["AUTOMUTE_S1925.csv","EASE-MM_S1676.csv","HotMuSiC_S1626.csv","I_Mutant2.0_S1948.csv","I_Mutant2.0_S2087.csv","iPTREE-STAB_S1859.csv","M47andM8_S1810.csv","M47andM8_S2760.csv","PON-TStab_dataset.csv","Saraboji_S1396.csv","SVM-WIN31_SVM-3D12_S1634.csv","SVM-WIN31_SVM-3D12_S1681.csv"],"id":7382,"numValue":4... | [{"id":9403,"numValue":8.0,"position":23,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | |||||||||||
fireprotdb:8468 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,468 | train | mutant | 1,107 | 158 | 1,248 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | I23G | I23G | 1 | 1 | 0 | 0 | 23 | I | G | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 23 | A | H | true | false | 0 | 7.449375 | 7,996 | ProTherm | 7 | Fluorescence, CD | Thermal | Mops | 50 mM | 43.4 | NaCl | 0.5 M | 1FTG_A:I22G | null | null | null | -0.17 | null | 0.34 | null | null | null | null | null | null | null | null | null | null | Yes | DCP|DDG|REVERSIBILITY | ION|ION_CONC|PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":null,"strValue":"NaCl","type":"ION"},{"numValue":null,"strValue":"0.5 M","type":"ION_CONC"},{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":43.4,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence, CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"... | [{"datasets":[],"id":27291,"numValue":0.34,"references":[],"strValue":null,"type":"DCP"},{"datasets":[],"id":27292,"numValue":-0.17,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":27293,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9403,"numValue":8.0,"position":23,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8469 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,469 | train | mutant | 1,107 | 158 | 1,248 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | I23G | I23G | 1 | 1 | 0 | 0 | 23 | I | G | 8 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 23 | A | H | true | false | 0 | 7.449375 | 8,481 | ProTherm | 7 | Fluorescence | Urea | Mops | 50 mM | 25.2 | NaCl | 0.5 M | 1FTG_A:I22G | null | null | null | -0.01 | null | null | null | 0.66 | null | null | null | null | null | null | null | null | Yes | DDG|CM|REVERSIBILITY | PH|EXP_TEMPERATURE|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 210 | ARTICLE | Equilibrium phi-analysis of a molten globule: the 1-149 apoflavodoxin fragment. | 2,006 | 10.1016/j.jmb.2005.10.086 | 16364364 | J Mol Biol;356;354-66 | 4 | Bueno M|Sancho J|L?pez-Llano J|Campos L A | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":25.2,"strValue":null,"type":"EXP_TEMPERATURE"},{"numValue":null,"strValue":"Fluorescence","type":"MEASURE"},{"numValue":null,"strValue":"Urea","type":"METHOD"},{"numValue":null,"strValue":"Mops","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER... | [{"datasets":[],"id":28848,"numValue":-0.01,"references":[],"strValue":null,"type":"DDG"},{"datasets":[],"id":28849,"numValue":0.66,"references":[],"strValue":null,"type":"CM"},{"datasets":[],"id":28850,"numValue":null,"references":[],"strValue":"Yes","type":"REVERSIBILITY"}] | [{"id":9403,"numValue":8.0,"position":23,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] | ||||||||||||
fireprotdb:8470 | fireprotdb | LiteFold/FireProtDB | labeled/fireprotdb/fireprotdb_search_all.jsonl | tables/labeled_fireprotdb_fireprotdb_search_all.jsonl.jsonl | 79354b4f8754e21c3eb41aaf3dd63ba34ae750cd | 8,470 | train | mutant | 925 | 158 | 1,047 | 170 | 170 | 20 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) | 1 | 20|123 | Flavodoxin | Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)|Nostoc sp. (strain ATCC 29151 / PCC 7119) | 1 | P0A3D9|P0A3E0 | IPR050619|IPR008254|IPR001226|IPR010086|IPR029039 | V32A | V32A | 1 | 1 | 0 | 0 | 32 | V | A | 6 | CONSERVATION | 1FTG|1FLV | 182|301 | null | 32 | A | E | false | false | 5.320099 | 15.692143 | 1,661 | ProTherm | 7 | CD | Thermal | MOPS | 50 mM | null | NaCl | 15 mM | 1FTG_A:V31A | 39.45 | -4.7 | null | null | null | null | 30.9 | null | null | null | null | null | null | null | null | null | yes | 3.0 | TM|DTM|DHVH|STATE|REVERSIBILITY | PH|MEASURE|METHOD|BUFFER|BUFFER_CONC|ION|ION_CONC|_PDB_CHAIN_MUTATION | 178 | ARTICLE | Structure of stable protein folding intermediates by equilibrium phi-analysis: the apoflavodoxin thermal intermediate. | 2,004 | 10.1016/j.jmb.2004.08.081 | 15504414 | J Mol Biol;344;239-55 | 5 | Campos Luis A|Sancho Javier|Bueno Marta|Lopez-Llano Jon|Jim?nez Mar?a Angeles | [{"numValue":7.0,"strValue":null,"type":"PH"},{"numValue":null,"strValue":"CD","type":"MEASURE"},{"numValue":null,"strValue":"Thermal","type":"METHOD"},{"numValue":null,"strValue":"MOPS","type":"BUFFER"},{"numValue":null,"strValue":"50 mM","type":"BUFFER_CONC"},{"numValue":null,"strValue":"NaCl","type":"ION"},{"numValu... | [{"datasets":[],"id":6164,"numValue":39.45,"references":[],"strValue":null,"type":"TM"},{"datasets":[],"id":6165,"numValue":-4.7,"references":[],"strValue":null,"type":"DTM"},{"datasets":[],"id":6166,"numValue":30.9,"references":[],"strValue":null,"type":"DHVH"},{"datasets":[],"id":6167,"numValue":3.0,"references":[],"... | [{"id":9412,"numValue":6.0,"position":32,"positionArray":null,"positionRange":null,"strValue":null,"type":"CONSERVATION"}] |
Subsets and Splits
No community queries yet
The top public SQL queries from the community will appear here once available.