xml_file stringlengths 5 11 | reference_id stringlengths 1 7 | date_last_updated stringclasses 487
values | pubmed_id stringlengths 5 8 ⌀ | article_year int64 1.95k 2.03k ⌀ | article_title stringlengths 23 347 ⌀ | journal_title stringlengths 3 197 ⌀ | authors stringlengths 5 2.35k ⌀ | epitope_id stringlengths 1 7 ⌀ | epitope_name stringlengths 1 85 ⌀ | epitope_structure_type stringclasses 8
values | epitope_chemical_type stringclasses 18
values | linear_sequence stringlengths 1 829 ⌀ | linear_sequence_length int64 1 829 ⌀ | discontinuous_residues stringlengths 2 419 ⌀ | starting_position int64 0 34.8k ⌀ | ending_position int64 3 34.8k ⌀ | source_organism_id stringlengths 1 8 ⌀ | source_molecule_genbank_id stringlengths 4 14 ⌀ | reference_region stringlengths 2 409 ⌀ | epitope_structure_defines stringclasses 4
values | epitope_evidence_code stringclasses 6
values | assay_category stringclasses 4
values | assay_id stringlengths 2 8 | assay_type_id stringclasses 412
values | assay_location_of_data stringlengths 4 126 ⌀ | qualitative_measurement stringclasses 5
values | is_positive bool 2
classes | quantitative_measurement stringlengths 3 25 ⌀ | host_organism_id stringclasses 729
values | host_sex stringclasses 2
values | host_age stringlengths 1 39 ⌀ | disease_state stringclasses 666
values | mhc_allele_id stringclasses 868
values | mhc_allele_types_present stringlengths 1 150 ⌀ | cell_type stringclasses 41
values | cell_tissue_type stringclasses 49
values | cell_culture_conditions stringclasses 9
values | antigen_evidence_code stringclasses 6
values | immunogen_evidence_code stringclasses 6
values | assay_comments stringclasses 0
values | split_bucket int64 1 9 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1048208.xml | 1048208 | 2026-04-07-07:00 | 41764718 | 2,026 | Identification of immunodominant T cell epitopes in SARS-CoV-2 spike protein in Syrian hamsters. | Journal of immunology (Baltimore, Md. : 1950) | Nadia Soudani; John Sidney; Ricardo Da Silva Antunes; James Brett Case; Ruby Sharma; Isabella Brew; Michael S Diamond; Teresa P Dilorenzo; Ali H Ellebedy; Alessandro Sette; Adrianus C M Boon | 1310479 | Pool 25 Peptide #3 | FragmentOfANaturalSequenceMolecule | Peptide from protein | IAGLIAIVMVTIMLC | 15 | null | 1,221 | 1,235 | 10002329 | QKJ89357.1 | null | Exact Epitope | null | TCell | 28537377 | 48 | Figure 2 | Negative | false | null | 10036 | null | null | null | null | null | splenocyte | spleen | Direct Ex Vivo | Exact match to reference information | Representative selection | null | 6 |
1048208.xml | 1048208 | 2026-04-07-07:00 | 41764718 | 2,026 | Identification of immunodominant T cell epitopes in SARS-CoV-2 spike protein in Syrian hamsters. | Journal of immunology (Baltimore, Md. : 1950) | Nadia Soudani; John Sidney; Ricardo Da Silva Antunes; James Brett Case; Ruby Sharma; Isabella Brew; Michael S Diamond; Teresa P Dilorenzo; Ali H Ellebedy; Alessandro Sette; Adrianus C M Boon | 1310266 | Pool 25 Peptide #4 | FragmentOfANaturalSequenceMolecule | Peptide from protein | AIVMVTIMLCCMTSC | 15 | null | 1,226 | 1,240 | 10002329 | QKJ89357.1 | null | Exact Epitope | null | TCell | 28537378 | 48 | Figure 2 | Negative | false | null | 10036 | null | null | null | null | null | splenocyte | spleen | Direct Ex Vivo | Exact match to reference information | Representative selection | null | 6 |
1048208.xml | 1048208 | 2026-04-07-07:00 | 41764718 | 2,026 | Identification of immunodominant T cell epitopes in SARS-CoV-2 spike protein in Syrian hamsters. | Journal of immunology (Baltimore, Md. : 1950) | Nadia Soudani; John Sidney; Ricardo Da Silva Antunes; James Brett Case; Ruby Sharma; Isabella Brew; Michael S Diamond; Teresa P Dilorenzo; Ali H Ellebedy; Alessandro Sette; Adrianus C M Boon | 1073433 | Pool 25 Peptide #5 | FragmentOfANaturalSequenceMolecule | Peptide from protein | TIMLCCMTSCCSCLK | 15 | null | 1,231 | 1,245 | 10002329 | QKJ89357.1 | null | Exact Epitope | null | TCell | 28537379 | 48 | Figure 2 | Negative | false | null | 10036 | null | null | null | null | null | splenocyte | spleen | Direct Ex Vivo | Exact match to reference information | Representative selection | null | 6 |
1048208.xml | 1048208 | 2026-04-07-07:00 | 41764718 | 2,026 | Identification of immunodominant T cell epitopes in SARS-CoV-2 spike protein in Syrian hamsters. | Journal of immunology (Baltimore, Md. : 1950) | Nadia Soudani; John Sidney; Ricardo Da Silva Antunes; James Brett Case; Ruby Sharma; Isabella Brew; Michael S Diamond; Teresa P Dilorenzo; Ali H Ellebedy; Alessandro Sette; Adrianus C M Boon | 1310316 | Pool 25 Peptide #7 | FragmentOfANaturalSequenceMolecule | Peptide from protein | CSCLKGCCSCGSCCK | 15 | null | 1,241 | 1,255 | 10002329 | QKJ89357.1 | null | Exact Epitope | null | TCell | 28537381 | 48 | Figure 2 | Negative | false | null | 10036 | null | null | null | null | null | splenocyte | spleen | Direct Ex Vivo | Exact match to reference information | Representative selection | null | 7 |
1048208.xml | 1048208 | 2026-04-07-07:00 | 41764718 | 2,026 | Identification of immunodominant T cell epitopes in SARS-CoV-2 spike protein in Syrian hamsters. | Journal of immunology (Baltimore, Md. : 1950) | Nadia Soudani; John Sidney; Ricardo Da Silva Antunes; James Brett Case; Ruby Sharma; Isabella Brew; Michael S Diamond; Teresa P Dilorenzo; Ali H Ellebedy; Alessandro Sette; Adrianus C M Boon | 1310436 | Pool 25 Peptide #8 | FragmentOfANaturalSequenceMolecule | Peptide from protein | GCCSCGSCCKFDEDD | 15 | null | 1,246 | 1,260 | 10002329 | QKJ89357.1 | null | Exact Epitope | null | TCell | 28537382 | 48 | Figure 2 | Negative | false | null | 10036 | null | null | null | null | null | splenocyte | spleen | Direct Ex Vivo | Exact match to reference information | Representative selection | null | 4 |
1048208.xml | 1048208 | 2026-04-07-07:00 | 41764718 | 2,026 | Identification of immunodominant T cell epitopes in SARS-CoV-2 spike protein in Syrian hamsters. | Journal of immunology (Baltimore, Md. : 1950) | Nadia Soudani; John Sidney; Ricardo Da Silva Antunes; James Brett Case; Ruby Sharma; Isabella Brew; Michael S Diamond; Teresa P Dilorenzo; Ali H Ellebedy; Alessandro Sette; Adrianus C M Boon | 1310459 | S<sub>1251-1265</sub> | FragmentOfANaturalSequenceMolecule | Peptide from protein | GSCCKFDEDDSEPVL | 15 | null | 1,251 | 1,265 | 10002329 | QKJ89357.1 | null | Exact Epitope | null | TCell | 28537383 | 48 | Figure 2 | Positive | true | null | 10036 | null | null | null | null | null | splenocyte | spleen | Direct Ex Vivo | Exact match to reference information | Representative selection | null | 7 |
1048208.xml | 1048208 | 2026-04-07-07:00 | 41764718 | 2,026 | Identification of immunodominant T cell epitopes in SARS-CoV-2 spike protein in Syrian hamsters. | Journal of immunology (Baltimore, Md. : 1950) | Nadia Soudani; John Sidney; Ricardo Da Silva Antunes; James Brett Case; Ruby Sharma; Isabella Brew; Michael S Diamond; Teresa P Dilorenzo; Ali H Ellebedy; Alessandro Sette; Adrianus C M Boon | 1310384 | S<sub>1256-1270</sub> | FragmentOfANaturalSequenceMolecule | Peptide from protein | FDEDDSEPVLKGVKL | 15 | null | 1,256 | 1,270 | 10002329 | QKJ89357.1 | null | Exact Epitope | null | TCell | 28537384 | 48 | Figure 2 | Positive | true | null | 10036 | null | null | null | null | null | splenocyte | spleen | Direct Ex Vivo | Exact match to reference information | Representative selection | null | 6 |
1048208.xml | 1048208 | 2026-04-07-07:00 | 41764718 | 2,026 | Identification of immunodominant T cell epitopes in SARS-CoV-2 spike protein in Syrian hamsters. | Journal of immunology (Baltimore, Md. : 1950) | Nadia Soudani; John Sidney; Ricardo Da Silva Antunes; James Brett Case; Ruby Sharma; Isabella Brew; Michael S Diamond; Teresa P Dilorenzo; Ali H Ellebedy; Alessandro Sette; Adrianus C M Boon | 1072563 | Pool 25 Peptide #11 | FragmentOfANaturalSequenceMolecule | Peptide from protein | SEPVLKGVKLHYT | 13 | null | 1,261 | 1,273 | 10002329 | QKJ89357.1 | null | Exact Epitope | null | TCell | 28537385 | 48 | Figure 2 | Negative | false | null | 10036 | null | null | null | null | null | splenocyte | spleen | Direct Ex Vivo | Exact match to reference information | Representative selection | null | 3 |
1048208.xml | 1048208 | 2026-04-07-07:00 | 41764718 | 2,026 | Identification of immunodominant T cell epitopes in SARS-CoV-2 spike protein in Syrian hamsters. | Journal of immunology (Baltimore, Md. : 1950) | Nadia Soudani; John Sidney; Ricardo Da Silva Antunes; James Brett Case; Ruby Sharma; Isabella Brew; Michael S Diamond; Teresa P Dilorenzo; Ali H Ellebedy; Alessandro Sette; Adrianus C M Boon | 2125876 | SARS-CoV-1-S<sub>633-644</sub> | FragmentOfANaturalSequenceMolecule | Peptide from protein | PAWRIYSTGNNVFQT | 15 | null | 617 | 631 | 10002316 | P59594.1 | null | Exact Epitope | null | TCell | 28537386 | 48 | Figure 3 | Positive | true | null | 10036 | null | null | null | null | null | splenocyte | spleen | Direct Ex Vivo | Exact match to reference information | Representative selection | null | 5 |
1048208.xml | 1048208 | 2026-04-07-07:00 | 41764718 | 2,026 | Identification of immunodominant T cell epitopes in SARS-CoV-2 spike protein in Syrian hamsters. | Journal of immunology (Baltimore, Md. : 1950) | Nadia Soudani; John Sidney; Ricardo Da Silva Antunes; James Brett Case; Ruby Sharma; Isabella Brew; Michael S Diamond; Teresa P Dilorenzo; Ali H Ellebedy; Alessandro Sette; Adrianus C M Boon | 7928 | S<sub>1257-1265</sub> | FragmentOfANaturalSequenceMolecule | Peptide from protein | DEDDSEPVL | 9 | null | 1,257 | 1,265 | 10002329 | QKJ89357.1 | null | Exact Epitope | null | TCell | 28537387 | 48 | Figure 4 | Positive | true | null | 10036 | null | null | null | 303 | null | T cell CD8+ | spleen | Direct Ex Vivo | Exact match to reference information | Representative selection | null | 2 |
1048208.xml | 1048208 | 2026-04-07-07:00 | 41764718 | 2,026 | Identification of immunodominant T cell epitopes in SARS-CoV-2 spike protein in Syrian hamsters. | Journal of immunology (Baltimore, Md. : 1950) | Nadia Soudani; John Sidney; Ricardo Da Silva Antunes; James Brett Case; Ruby Sharma; Isabella Brew; Michael S Diamond; Teresa P Dilorenzo; Ali H Ellebedy; Alessandro Sette; Adrianus C M Boon | 2454179 | S<sub>1261-1268</sub> | FragmentOfANaturalSequenceMolecule | Peptide from protein | SEPVLKGV | 8 | null | 1,261 | 1,268 | 10002329 | QKJ89357.1 | null | Exact Epitope | null | TCell | 28537388 | 48 | Figure 4 | Positive | true | null | 10036 | null | null | null | 303 | null | T cell CD8+ | spleen | Direct Ex Vivo | Exact match to reference information | Representative selection | null | 4 |
1048208.xml | 1048208 | 2026-04-07-07:00 | 41764718 | 2,026 | Identification of immunodominant T cell epitopes in SARS-CoV-2 spike protein in Syrian hamsters. | Journal of immunology (Baltimore, Md. : 1950) | Nadia Soudani; John Sidney; Ricardo Da Silva Antunes; James Brett Case; Ruby Sharma; Isabella Brew; Michael S Diamond; Teresa P Dilorenzo; Ali H Ellebedy; Alessandro Sette; Adrianus C M Boon | 1532906 | S<sub>633-644</sub> | FragmentOfANaturalSequenceMolecule | Peptide from protein | WRVYSTGSNVFQ | 12 | null | 633 | 644 | 10002329 | QKJ89357.1 | null | Exact Epitope | null | TCell | 28537390 | 48 | Figure S3 | Positive | true | null | 10036 | null | null | null | null | null | splenocyte | spleen | Direct Ex Vivo | Exact match to reference information | Representative selection | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454531 | Peptide 43 | FragmentOfANaturalSequenceMolecule | Peptide from protein | KVAPAPAVVKKQEAKK | 16 | null | 11 | 26 | 9606 | P62424.2 | null | Epitope containing region/antigenic site | null | TCell | 28538710 | 73 | Figure 5 | Positive | true | null | 9606 | null | null | null | 350 | null | PBMC | blood | Short Term Restimulated | Representative selection | Exact match to reference information | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454531 | Peptide 43 | FragmentOfANaturalSequenceMolecule | Peptide from protein | KVAPAPAVVKKQEAKK | 16 | null | 11 | 26 | 9606 | P62424.2 | null | Epitope containing region/antigenic site | null | TCell | 28538717 | 73 | Figure 5 | Positive | true | null | 9606 | null | null | null | 350 | null | PBMC | blood | Short Term Restimulated | Representative selection | Exact match to reference information | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454531 | Peptide 43 | FragmentOfANaturalSequenceMolecule | Peptide from protein | KVAPAPAVVKKQEAKK | 16 | null | 11 | 26 | 9606 | P62424.2 | null | Epitope containing region/antigenic site | null | TCell | 28538722 | 73 | Figure 5 | Positive | true | null | 9606 | null | null | DOID:3458 | 350 | null | PBMC | blood | Short Term Restimulated | Representative selection | Exact match to reference information | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454531 | Peptide 43 | FragmentOfANaturalSequenceMolecule | Peptide from protein | KVAPAPAVVKKQEAKK | 16 | null | 11 | 26 | 9606 | P62424.2 | null | Epitope containing region/antigenic site | null | TCell | 28538721 | 73 | Figure 5 | Positive | true | null | 9606 | null | null | DOID:3458 | 350 | null | PBMC | blood | Short Term Restimulated | Representative selection | Exact match to reference information | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454531 | Peptide 43 | FragmentOfANaturalSequenceMolecule | Peptide from protein | KVAPAPAVVKKQEAKK | 16 | null | 11 | 26 | 9606 | P62424.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537791 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454531 | Peptide 43 | FragmentOfANaturalSequenceMolecule | Peptide from protein | KVAPAPAVVKKQEAKK | 16 | null | 11 | 26 | 9606 | P62424.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537790 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454531 | Peptide 43 | FragmentOfANaturalSequenceMolecule | Peptide from protein | KVAPAPAVVKKQEAKK | 16 | null | 11 | 26 | 9606 | P62424.2 | null | Epitope containing region/antigenic site | null | MhcBinding | 28538723 | 185 | Figure S6 | Positive | true | null | null | null | null | null | null | null | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454748 | Peptide 45 | FragmentOfANaturalSequenceMolecule | Peptide from protein | RTYAGGTASATKVSASSGATSKS | 23 | null | 59 | 81 | 9606 | P20810-10.1 | null | Epitope containing region/antigenic site | null | TCell | 28538711 | 73 | Figure S4 | Positive | true | null | 9606 | null | null | null | 350 | null | PBMC | blood | Short Term Restimulated | Representative selection | Exact match to reference information | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454748 | Peptide 45 | FragmentOfANaturalSequenceMolecule | Peptide from protein | RTYAGGTASATKVSASSGATSKS | 23 | null | 59 | 81 | 9606 | P20810-10.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537792 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454748 | Peptide 45 | FragmentOfANaturalSequenceMolecule | Peptide from protein | RTYAGGTASATKVSASSGATSKS | 23 | null | 59 | 81 | 9606 | P20810-10.1 | null | Epitope containing region/antigenic site | null | MhcBinding | 28538724 | 185 | Figure S6 | Positive | true | null | null | null | null | null | null | null | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454764 | Peptide 46 | FragmentOfANaturalSequenceMolecule | Peptide from protein | SESAAAPAFASSSSEVNPAPKFHW | 24 | null | 26 | 49 | 9606 | EAW64743.1 | null | Epitope containing region/antigenic site | null | TCell | 28538709 | 73 | Figure 5 | Positive | true | null | 9606 | null | null | null | 350 | null | PBMC | blood | Short Term Restimulated | Representative selection | Exact match to reference information | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454764 | Peptide 46 | FragmentOfANaturalSequenceMolecule | Peptide from protein | SESAAAPAFASSSSEVNPAPKFHW | 24 | null | 26 | 49 | 9606 | EAW64743.1 | null | Epitope containing region/antigenic site | null | TCell | 28538716 | 73 | Figure 5 | Positive | true | null | 9606 | null | null | null | 350 | null | PBMC | blood | Short Term Restimulated | Representative selection | Exact match to reference information | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454764 | Peptide 46 | FragmentOfANaturalSequenceMolecule | Peptide from protein | SESAAAPAFASSSSEVNPAPKFHW | 24 | null | 26 | 49 | 9606 | EAW64743.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537793 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454764 | Peptide 46 | FragmentOfANaturalSequenceMolecule | Peptide from protein | SESAAAPAFASSSSEVNPAPKFHW | 24 | null | 26 | 49 | 9606 | EAW64743.1 | null | Epitope containing region/antigenic site | null | MhcBinding | 28538725 | 185 | Figure S6 | Positive | true | null | null | null | null | null | null | null | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454452 | Peptide 48 | FragmentOfANaturalSequenceMolecule | Peptide from protein | GKFYLVIEELSQLFRSLVPIQL | 22 | null | 295 | 316 | 9606 | Q96EX2.2 | null | Epitope containing region/antigenic site | null | TCell | 28538713 | 73 | Figures S4 and 5 | Positive | true | null | 9606 | null | null | null | 326 | 63 413 | PBMC | blood | Short Term Restimulated | Representative selection | Exact match to reference information | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454452 | Peptide 48 | FragmentOfANaturalSequenceMolecule | Peptide from protein | GKFYLVIEELSQLFRSLVPIQL | 22 | null | 295 | 316 | 9606 | Q96EX2.2 | null | Epitope containing region/antigenic site | null | TCell | 28538718 | 73 | Figure 5 | Positive | true | null | 9606 | null | null | DOID:3458 | 326 | 413 | PBMC | blood | Short Term Restimulated | Representative selection | Exact match to reference information | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454452 | Peptide 48 | FragmentOfANaturalSequenceMolecule | Peptide from protein | GKFYLVIEELSQLFRSLVPIQL | 22 | null | 295 | 316 | 9606 | Q96EX2.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537795 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1819222 | Peptide 42 | FragmentOfANaturalSequenceMolecule | Peptide from protein | RQTVAVGVIKAVDKKA | 16 | null | 430 | 445 | 9606 | P68104.1 | null | Epitope containing region/antigenic site | null | TCell | 28538714 | 73 | Figure S4 | Positive | true | null | 9606 | null | null | null | 350 | null | PBMC | blood | Short Term Restimulated | Representative selection | Exact match to reference information | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1819222 | Peptide 42 | FragmentOfANaturalSequenceMolecule | Peptide from protein | RQTVAVGVIKAVDKKA | 16 | null | 430 | 445 | 9606 | P68104.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537796 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1819222 | Peptide 42 | FragmentOfANaturalSequenceMolecule | Peptide from protein | RQTVAVGVIKAVDKKA | 16 | null | 430 | 445 | 9606 | P68104.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537797 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454391 | Peptide 44 | FragmentOfANaturalSequenceMolecule | Peptide from protein | ELEEALANASDAELCDIAAILGMHTLM | 27 | null | 115 | 141 | 9606 | P28289.1 | null | Epitope containing region/antigenic site | null | TCell | 28538715 | 73 | Figure S4 | Positive | true | null | 9606 | null | null | null | 350 | null | PBMC | blood | Short Term Restimulated | Representative selection | Exact match to reference information | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454391 | Peptide 44 | FragmentOfANaturalSequenceMolecule | Peptide from protein | ELEEALANASDAELCDIAAILGMHTLM | 27 | null | 115 | 141 | 9606 | P28289.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537798 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454391 | Peptide 44 | FragmentOfANaturalSequenceMolecule | Peptide from protein | ELEEALANASDAELCDIAAILGMHTLM | 27 | null | 115 | 141 | 9606 | P28289.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537799 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454295 | AAAPAESAAPAAGEEPSKEEGEPKK. | FragmentOfANaturalSequenceMolecule | Peptide from protein | AAAPAESAAPAAGEEPSKEEGEPKK | 25 | null | 126 | 150 | 9606 | P80723.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537800 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454298 | AACHRLKLWPELQDNGGDYVSA. | FragmentOfANaturalSequenceMolecule | Peptide from protein | AACHRLKLWPELQDNGGDYVSA | 22 | null | 484 | 505 | 9606 | Q9H6R4.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537801 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454301 | AATKKPAPEKKPAEKKPTTEEKKPAA. | FragmentOfANaturalSequenceMolecule | Peptide from protein | AATKKPAPEKKPAEKKPTTEEKKPAA | 26 | null | 402 | 427 | 9606 | P36578.5 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537803 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454309 | AFGNAKTVKNDNSSRFGKFI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | AFGNAKTVKNDNSSRFGKFI | 20 | null | 220 | 239 | 9606 | P35579.4 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537804 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454310 | AFTKNQKDPGVLDRM. | FragmentOfANaturalSequenceMolecule | Peptide from protein | AFTKNQKDPGVLDRM | 15 | null | 49 | 63 | 9606 | P31949.2 | null | Exact Epitope | null | MhcLigandElution | 28537805 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454312 | AIINSGPREDSTRI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | AIINSGPREDSTRI | 14 | null | 115 | 128 | 9606 | P46782.4 | null | Exact Epitope | null | MhcLigandElution | 28537806 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454314 | ALPLQREMKMFLEKLC. | FragmentOfANaturalSequenceMolecule | Peptide from protein | ALPLQREMKMFLEKLC | 16 | null | 287 | 302 | 9606 | Q9UDY6.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537807 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454317 | AMRIMGIPEEEQMGLL. | FragmentOfANaturalSequenceMolecule | Peptide from protein | AMRIMGIPEEEQMGLL | 16 | null | 325 | 340 | 9606 | P35579.4 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537808 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454327 | ATADILRGLLSNVLCRLCSKY. | FragmentOfANaturalSequenceMolecule | Peptide from protein | ATADILRGLLSNVLCRLCSKY | 21 | null | 139 | 159 | 9606 | P15018.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537809 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 859804 | AVAKADKLAEEHSS. | FragmentOfANaturalSequenceMolecule | Peptide from protein | AVAKADKLAEEHSS | 14 | null | 516 | 529 | 9606 | P06576.3 | null | Exact Epitope | null | MhcLigandElution | 28537810 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 859804 | AVAKADKLAEEHSS. | FragmentOfANaturalSequenceMolecule | Peptide from protein | AVAKADKLAEEHSS | 14 | null | 516 | 529 | 9606 | P06576.3 | null | Exact Epitope | null | MhcLigandElution | 28537811 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454345 | AVVTVPAYFNDSQRQATKDAGTIAGLN. | FragmentOfANaturalSequenceMolecule | Peptide from protein | AVVTVPAYFNDSQRQATKDAGTIAGLN | 27 | null | 142 | 168 | 9606 | P11142.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537812 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454349 | CKAGAVEKGVPLYRHIADLAGNSEV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | CKAGAVEKGVPLYRHIADLAGNSEV | 25 | null | 119 | 143 | 9606 | P06733.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537814 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454351 | DAEQRGELAIKDANAKLSELE. | FragmentOfANaturalSequenceMolecule | Peptide from protein | DAEQRGELAIKDANAKLSELE | 21 | null | 337 | 357 | 9606 | P05787.7 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537815 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454354 | DESTGSIAKRLQSIGTENTEENRRFY. | FragmentOfANaturalSequenceMolecule | Peptide from protein | DESTGSIAKRLQSIGTENTEENRRFY | 26 | null | 34 | 59 | 9606 | P04075.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537817 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454355 | DFIKSELKKAGGANYDAQTE. | FragmentOfANaturalSequenceMolecule | Peptide from protein | DFIKSELKKAGGANYDAQTE | 20 | null | 123 | 142 | 9606 | Q14019.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537818 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454356 | DFKSPDDPSRYISPDQLA. | FragmentOfANaturalSequenceMolecule | Peptide from protein | DFKSPDDPSRYISPDQLA | 18 | null | 260 | 277 | 9606 | P06733.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537819 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454357 | DFKSPDDPSRYISPDQLADLY. | FragmentOfANaturalSequenceMolecule | Peptide from protein | DFKSPDDPSRYISPDQLADLY | 21 | null | 260 | 280 | 9606 | P06733.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537820 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454358 | DFNPKSSKQAKDVSRM. | FragmentOfANaturalSequenceMolecule | Peptide from protein | DFNPKSSKQAKDVSRM | 16 | null | 219 | 234 | 9606 | P09496.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537821 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454359 | DFTRGILTP. | FragmentOfANaturalSequenceMolecule | Peptide from protein | DFTRGILTP | 9 | null | 384 | 392 | 9606 | P35579.4 | null | Exact Epitope | null | MhcLigandElution | 28537822 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454363 | DGKVVSETNDTKVLRH. | FragmentOfANaturalSequenceMolecule | Peptide from protein | DGKVVSETNDTKVLRH | 16 | null | 415 | 430 | 9606 | P05783.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537823 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454363 | DGKVVSETNDTKVLRH. | FragmentOfANaturalSequenceMolecule | Peptide from protein | DGKVVSETNDTKVLRH | 16 | null | 415 | 430 | 9606 | P05783.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537824 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454365 | DLDRNKDQEVNFQ. | FragmentOfANaturalSequenceMolecule | Peptide from protein | DLDRNKDQEVNFQ | 13 | null | 59 | 71 | 9606 | P06703.1 | null | Exact Epitope | null | MhcLigandElution | 28537825 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454366 | DLDRNKDQEVNFQEY. | FragmentOfANaturalSequenceMolecule | Peptide from protein | DLDRNKDQEVNFQEY | 15 | null | 59 | 73 | 9606 | P06703.1 | null | Exact Epitope | null | MhcLigandElution | 28537826 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1197640 | DMAKKETVWRLEEF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | DMAKKETVWRLEEF | 14 | null | 60 | 73 | 9606 | P01903.2 | null | Exact Epitope | null | MhcLigandElution | 28537827 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454371 | DVLEDKLKGEMMDLQHGSLF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | DVLEDKLKGEMMDLQHGSLF | 20 | null | 53 | 72 | 9606 | P07195.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537828 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454372 | DVMRALGQNPTNAEVLK. | FragmentOfANaturalSequenceMolecule | Peptide from protein | DVMRALGQNPTNAEVLK | 17 | null | 91 | 107 | 9606 | P14649.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537829 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454373 | DYLHLPPEIVPATLRRS. | FragmentOfANaturalSequenceMolecule | Peptide from protein | DYLHLPPEIVPATLRRS | 17 | null | 81 | 97 | 9606 | P46783.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537830 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454377 | EDVIINGHSHEDDNPFAEY. | FragmentOfANaturalSequenceMolecule | Peptide from protein | EDVIINGHSHEDDNPFAEY | 19 | null | 16 | 34 | 9606 | Q9BPZ3.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537831 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454377 | EDVIINGHSHEDDNPFAEY. | FragmentOfANaturalSequenceMolecule | Peptide from protein | EDVIINGHSHEDDNPFAEY | 19 | null | 16 | 34 | 9606 | Q9BPZ3.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537832 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454378 | EEEGKGKDASGNKVKAEPAKIEAF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | EEEGKGKDASGNKVKAEPAKIEAF | 24 | null | 127 | 150 | 9606 | P00558.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537833 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454382 | EFKANAEKTSGSNVKIVKVKKE. | FragmentOfANaturalSequenceMolecule | Peptide from protein | EFKANAEKTSGSNVKIVKVKKE | 22 | null | 30 | 51 | 9606 | P56381.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537835 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454382 | EFKANAEKTSGSNVKIVKVKKE. | FragmentOfANaturalSequenceMolecule | Peptide from protein | EFKANAEKTSGSNVKIVKVKKE | 22 | null | 30 | 51 | 9606 | P56381.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537834 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454383 | EFKANAKKTSGNSVKIVKVKKE. | FragmentOfANaturalSequenceMolecule | Peptide from protein | EFKANAKKTSGNSVKIVKVKKE | 22 | null | 30 | 51 | 9606 | Q5VTU8.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537836 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454383 | EFKANAKKTSGNSVKIVKVKKE. | FragmentOfANaturalSequenceMolecule | Peptide from protein | EFKANAKKTSGNSVKIVKVKKE | 22 | null | 30 | 51 | 9606 | Q5VTU8.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537837 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1094641 | EFTRILKHGAKDKDD. | FragmentOfANaturalSequenceMolecule | Peptide from protein | EFTRILKHGAKDKDD | 15 | null | 158 | 172 | 9606 | O14950.2 | null | Exact Epitope | null | MhcLigandElution | 28537838 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454384 | EIAIIPSKKLRNKIAGYVTHLM. | FragmentOfANaturalSequenceMolecule | Peptide from protein | EIAIIPSKKLRNKIAGYVTHLM | 22 | null | 37 | 58 | 9606 | P08708.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537839 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454392 | ELTIGSKLQDAE. | FragmentOfANaturalSequenceMolecule | Peptide from protein | ELTIGSKLQDAE | 12 | null | 41 | 52 | 9606 | P06703.1 | null | Exact Epitope | null | MhcLigandElution | 28537842 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454393 | EMYKGKKRHEMPPHIYA. | FragmentOfANaturalSequenceMolecule | Peptide from protein | EMYKGKKRHEMPPHIYA | 17 | null | 136 | 152 | 9606 | P35579.4 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537843 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454395 | EPKTTDSFLEIELAHLANGTLNPYCVLW. | FragmentOfANaturalSequenceMolecule | Peptide from protein | EPKTTDSFLEIELAHLANGTLNPYCVLW | 28 | null | 795 | 822 | 9606 | O60242.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537844 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454397 | ETAKGDYPLEAVRMQHLI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | ETAKGDYPLEAVRMQHLI | 18 | null | 364 | 381 | 9606 | P14618.4 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537845 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454398 | ETQEKNPLPSAGES. | FragmentOfANaturalSequenceMolecule | Peptide from protein | ETQEKNPLPSAGES | 14 | null | null | null | 32644 | null | null | Exact Epitope | null | MhcLigandElution | 28537846 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 658617 | ETQEKNPLPSKETIEQEKQ. | FragmentOfANaturalSequenceMolecule | Peptide from protein | ETQEKNPLPSKETIEQEKQ | 19 | null | 22 | 40 | 9606 | P62328.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537847 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454399 | ETQEKNPLPSKETIEQEKQAGE. | FragmentOfANaturalSequenceMolecule | Peptide from protein | ETQEKNPLPSKETIEQEKQAGE | 22 | null | 22 | 43 | 9606 | P62328.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537848 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 547398 | ETQEKNPLPSKETIEQEKQAGES. | FragmentOfANaturalSequenceMolecule | Peptide from protein | ETQEKNPLPSKETIEQEKQAGES | 23 | null | 22 | 44 | 9606 | P62328.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537849 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454400 | ETQEKNTLPTKETIEQEKRS. | FragmentOfANaturalSequenceMolecule | Peptide from protein | ETQEKNTLPTKETIEQEKRS | 20 | null | 22 | 41 | 9606 | P63313.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537850 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454403 | FAEKLHQAMKGVGTRHKALI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | FAEKLHQAMKGVGTRHKALI | 20 | null | 278 | 297 | 9606 | P04083.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537851 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454404 | FAGDKGYLTKEDLR. | FragmentOfANaturalSequenceMolecule | Peptide from protein | FAGDKGYLTKEDLR | 14 | null | 19 | 32 | 9606 | P60903.2 | null | Exact Epitope | null | MhcLigandElution | 28537852 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454405 | FAGGGDLPPAPLSPAGPAAYSPPGP. | FragmentOfANaturalSequenceMolecule | Peptide from protein | FAGGGDLPPAPLSPAGPAAYSPPGP | 25 | null | 32 | 56 | 9606 | Q0D2I5.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537853 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454406 | FAQIHEMQDLGDKLRMI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | FAQIHEMQDLGDKLRMI | 17 | null | 191 | 207 | 9606 | P36776.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537854 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454407 | FDAERDALNIETAIKTKGVDEVTI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | FDAERDALNIETAIKTKGVDEVTI | 24 | null | 33 | 56 | 9606 | P07355.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537855 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454408 | FDKEGNGTVMGAEIRHVLV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | FDKEGNGTVMGAEIRHVLV | 19 | null | 96 | 114 | 9606 | P60660.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537856 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454408 | FDKEGNGTVMGAEIRHVLV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | FDKEGNGTVMGAEIRHVLV | 19 | null | 96 | 114 | 9606 | P60660.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537857 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454409 | FFAEKLHQAMKGVGTRHKALI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | FFAEKLHQAMKGVGTRHKALI | 21 | null | 277 | 297 | 9606 | P04083.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537858 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454410 | FFKNWRDPDQTDGLGLSYLS. | FragmentOfANaturalSequenceMolecule | Peptide from protein | FFKNWRDPDQTDGLGLSYLS | 20 | null | 392 | 411 | 9606 | P06396.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537859 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1096571 | FFSETGAGKHVPRAVFV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | FFSETGAGKHVPRAVFV | 17 | null | 52 | 68 | 9606 | P0DPH7.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537860 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454411 | FFVGGNWKMNGRKQSLGELI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | FFVGGNWKMNGRKQSLGELI | 20 | null | 7 | 26 | 9606 | P60174.4 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537861 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454414 | FIIKGVRKSNAAERR. | FragmentOfANaturalSequenceMolecule | Peptide from protein | FIIKGVRKSNAAERR | 15 | null | 212 | 226 | 9606 | A0A0G2JH46.1 | null | Exact Epitope | null | MhcLigandElution | 28537863 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454415 | FIKDYPVVSIEDPFDQDDW. | FragmentOfANaturalSequenceMolecule | Peptide from protein | FIKDYPVVSIEDPFDQDDW | 19 | null | 283 | 301 | 9606 | P06733.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537864 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454415 | FIKDYPVVSIEDPFDQDDW. | FragmentOfANaturalSequenceMolecule | Peptide from protein | FIKDYPVVSIEDPFDQDDW | 19 | null | 283 | 301 | 9606 | P06733.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537865 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454417 | FILKHTGPGILSMANAGPNTNGSQFF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | FILKHTGPGILSMANAGPNTNGSQFF | 26 | null | 88 | 113 | 9606 | P62937.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537867 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454418 | FILLPKDVEDESTGLEKIEKQLN. | FragmentOfANaturalSequenceMolecule | Peptide from protein | FILLPKDVEDESTGLEKIEKQLN | 23 | null | 229 | 251 | 9606 | P36952.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537868 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454419 | FINNPLAQADWAAKKLV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | FINNPLAQADWAAKKLV | 17 | null | 16 | 32 | 9606 | P35579.4 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537869 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454420 | FIRGVVDSEDLPLNISRE. | FragmentOfANaturalSequenceMolecule | Peptide from protein | FIRGVVDSEDLPLNISRE | 18 | null | 384 | 401 | 9606 | P07900.5 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537870 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454421 | FITKMDYPKQTQVSVLPEGGETPLFKQFF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | FITKMDYPKQTQVSVLPEGGETPLFKQFF | 29 | null | 365 | 393 | 9606 | P06396.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537871 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 4 |
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