xml_file stringlengths 5 11 | reference_id stringlengths 1 7 | date_last_updated stringclasses 487
values | pubmed_id stringlengths 5 8 ⌀ | article_year int64 1.95k 2.03k ⌀ | article_title stringlengths 23 347 ⌀ | journal_title stringlengths 3 197 ⌀ | authors stringlengths 5 2.35k ⌀ | epitope_id stringlengths 1 7 ⌀ | epitope_name stringlengths 1 85 ⌀ | epitope_structure_type stringclasses 8
values | epitope_chemical_type stringclasses 18
values | linear_sequence stringlengths 1 829 ⌀ | linear_sequence_length int64 1 829 ⌀ | discontinuous_residues stringlengths 2 419 ⌀ | starting_position int64 0 34.8k ⌀ | ending_position int64 3 34.8k ⌀ | source_organism_id stringlengths 1 8 ⌀ | source_molecule_genbank_id stringlengths 4 14 ⌀ | reference_region stringlengths 2 409 ⌀ | epitope_structure_defines stringclasses 4
values | epitope_evidence_code stringclasses 6
values | assay_category stringclasses 4
values | assay_id stringlengths 2 8 | assay_type_id stringclasses 412
values | assay_location_of_data stringlengths 4 126 ⌀ | qualitative_measurement stringclasses 5
values | is_positive bool 2
classes | quantitative_measurement stringlengths 3 25 ⌀ | host_organism_id stringclasses 729
values | host_sex stringclasses 2
values | host_age stringlengths 1 39 ⌀ | disease_state stringclasses 666
values | mhc_allele_id stringclasses 868
values | mhc_allele_types_present stringlengths 1 150 ⌀ | cell_type stringclasses 41
values | cell_tissue_type stringclasses 49
values | cell_culture_conditions stringclasses 9
values | antigen_evidence_code stringclasses 6
values | immunogen_evidence_code stringclasses 6
values | assay_comments stringclasses 0
values | split_bucket int64 1 9 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454544 | LEKIVNPKGEEKPSM. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LEKIVNPKGEEKPSM | 15 | null | 224 | 238 | 9606 | Q9UL46.4 | null | Exact Epitope | null | MhcLigandElution | 28537987 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454546 | LESIRKEVKGDLENAFL. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LESIRKEVKGDLENAFL | 17 | null | 241 | 257 | 9606 | P07355.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537988 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454547 | LFADKVPKTAENFR. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LFADKVPKTAENFR | 14 | null | 24 | 37 | 9606 | P62937.2 | null | Exact Epitope | null | MhcLigandElution | 28537989 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454548 | LFDRTGDGKILY. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LFDRTGDGKILY | 12 | null | 18 | 29 | 9606 | P60660.2 | null | Exact Epitope | null | MhcLigandElution | 28537990 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454549 | LFKRISEQFT. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LFKRISEQFT | 10 | null | 377 | 386 | 9606 | P04350.2 | null | Exact Epitope | null | MhcLigandElution | 28537991 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454550 | LFLRTPKIVSGKDYNVTANSKLV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LFLRTPKIVSGKDYNVTANSKLV | 23 | null | 70 | 92 | 9606 | P00338.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537992 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454551 | LFVDKIREYKSKRQTSGGPVDASSEYQQELE. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LFVDKIREYKSKRQTSGGPVDASSEYQQELE | 31 | null | 42 | 72 | 9606 | P18859.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537993 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454552 | LGNPKSDEMNVKVLD. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LGNPKSDEMNVKVLD | 15 | null | 52 | 66 | 9606 | P60660.2 | null | Exact Epitope | null | MhcLigandElution | 28537994 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454553 | LHPSSLPLTPPSPSLSPSPLHGIFQV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LHPSSLPLTPPSPSLSPSPLHGIFQV | 26 | null | 206 | 231 | 9606 | Q96EK2.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537995 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454554 | LIAKSVRNYTQEASLGALQNLT. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LIAKSVRNYTQEASLGALQNLT | 22 | null | 689 | 710 | 9606 | Q99959.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537996 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454555 | LIGGITGPIAKLIHEQEQQSSS. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LIGGITGPIAKLIHEQEQQSSS | 22 | null | 82 | 103 | 9606 | Q96FQ6.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537997 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454556 | LIGRTWNDPSVQQDIKFLP. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LIGRTWNDPSVQQDIKFLP | 19 | null | 98 | 116 | 9606 | P11021.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28537998 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1156837 | LIQKELTIGSKLQDAE. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LIQKELTIGSKLQDAE | 16 | null | 37 | 52 | 9606 | P06703.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538000 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454558 | LKASMKGLGTDEDSLI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LKASMKGLGTDEDSLI | 16 | null | 114 | 129 | 9606 | P07355.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538001 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454559 | LKQVHPDTGISSKAMGIMNSF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LKQVHPDTGISSKAMGIMNSF | 21 | null | 46 | 66 | 9606 | O60814.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538003 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454559 | LKQVHPDTGISSKAMGIMNSF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LKQVHPDTGISSKAMGIMNSF | 21 | null | 46 | 66 | 9606 | O60814.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538004 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454560 | LKRDLAKDITSDTSGDFRNALL. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LKRDLAKDITSDTSGDFRNALL | 22 | null | 160 | 181 | 9606 | P04083.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538005 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1250959 | LKVTKAAGTKKQFQKF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LKVTKAAGTKKQFQKF | 16 | null | 143 | 158 | 9606 | P62280.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538007 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454562 | LLKEASKQADVNLVNAKL. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LLKEASKQADVNLVNAKL | 18 | null | 378 | 395 | 9606 | O43175.4 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538008 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 553845 | LLTEAPLNPKANREKM. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LLTEAPLNPKANREKM | 16 | null | 804 | 819 | 9606 | P0CG38.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538010 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 144404 | LLTEAPLNPKANREKMTQI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LLTEAPLNPKANREKMTQI | 19 | null | 804 | 822 | 9606 | P0CG38.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538011 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1251573 | LLTEAPLNPKANREKMTQIMF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LLTEAPLNPKANREKMTQIMF | 21 | null | 804 | 824 | 9606 | P0CG38.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538012 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1251573 | LLTEAPLNPKANREKMTQIMF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LLTEAPLNPKANREKMTQIMF | 21 | null | 804 | 824 | 9606 | P0CG38.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538013 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454565 | LLTKAPLDPKA. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LLTKAPLDPKA | 11 | null | 21 | 31 | 9606 | Q562Q5.1 | null | Exact Epitope | null | MhcLigandElution | 28538014 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454566 | LLTKAPLNPKANREKMTQIMF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LLTKAPLNPKANREKMTQIMF | 21 | null | 21 | 41 | 9606 | Q562T8.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538015 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 521427 | LMAHMASKE. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LMAHMASKE | 9 | null | 327 | 335 | 9606 | P04406.3 | null | Exact Epitope | null | MhcLigandElution | 28538016 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454568 | LMKNMDPLNDNIATLLHQSSDKFV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LMKNMDPLNDNIATLLHQSSDKFV | 24 | null | 585 | 608 | 9606 | P35579.4 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538018 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454569 | LMTTVHAITATQKTVDGPSGKLW. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LMTTVHAITATQKTVDGPSGKLW | 23 | null | 174 | 196 | 9606 | P04406.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538019 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454570 | LMTTVHAITATQKTVDGPSGKLWRD. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LMTTVHAITATQKTVDGPSGKLWRD | 25 | null | 174 | 198 | 9606 | P04406.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538020 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454571 | LMVTNDGATILKNIGVDNPAAKVLV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LMVTNDGATILKNIGVDNPAAKVLV | 25 | null | 61 | 85 | 9606 | P78371.4 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538021 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454572 | LNEASVLHNLKERYY. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LNEASVLHNLKERYY | 15 | null | 92 | 106 | 9606 | P35579.4 | null | Exact Epitope | null | MhcLigandElution | 28538022 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2312430 | LPVGAANFR. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LPVGAANFR | 9 | null | 171 | 179 | 9606 | P06733.2 | null | Exact Epitope | null | MhcLigandElution | 28538024 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2312430 | LPVGAANFR. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LPVGAANFR | 9 | null | 171 | 179 | 9606 | P06733.2 | null | Exact Epitope | null | MhcLigandElution | 28538025 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454582 | LPVISAENWKPATKTDQVIQSLI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LPVISAENWKPATKTDQVIQSLI | 23 | null | 87 | 109 | 9606 | A0A1B0GUS4.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538026 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454585 | LRDSHGVAQVRF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LRDSHGVAQVRF | 12 | null | 54 | 65 | 9606 | P62277.2 | null | Exact Epitope | null | MhcLigandElution | 28538027 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454585 | LRDSHGVAQVRF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LRDSHGVAQVRF | 12 | null | 54 | 65 | 9606 | P62277.2 | null | Exact Epitope | null | MhcLigandElution | 28538028 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454586 | LRHQNLLKELQDLALQGAKERAH. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LRHQNLLKELQDLALQGAKERAH | 23 | null | 70 | 92 | 9606 | P10645.7 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538029 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454587 | LRINKALDKTKRQGASFI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LRINKALDKTKRQGASFI | 18 | null | 431 | 448 | 9606 | P35579.4 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538030 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454588 | LRQKAEADKNDKAVKDLV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LRQKAEADKNDKAVKDLV | 18 | null | 638 | 655 | 9606 | P08238.4 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538031 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454589 | LRQKAEADKNDKSVKDLV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LRQKAEADKNDKSVKDLV | 18 | null | 646 | 663 | 9606 | P07900.5 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538032 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454589 | LRQKAEADKNDKSVKDLV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LRQKAEADKNDKSVKDLV | 18 | null | 646 | 663 | 9606 | P07900.5 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538033 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454590 | LRTKSTGGAPTFNVTVTKTDKTLV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LRTKSTGGAPTFNVTVTKTDKTLV | 24 | null | 88 | 111 | 9606 | P07737.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538034 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 223379 | LRVAPEEHPVLL. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LRVAPEEHPVLL | 12 | null | 794 | 805 | 9606 | A5A3E0.2 | null | Exact Epitope | null | MhcLigandElution | 28538035 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 223379 | LRVAPEEHPVLL. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LRVAPEEHPVLL | 12 | null | 794 | 805 | 9606 | A5A3E0.2 | null | Exact Epitope | null | MhcLigandElution | 28538036 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454591 | LRVRGEVAPDAKSFV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LRVRGEVAPDAKSFV | 15 | null | 18 | 32 | 9606 | P09382.2 | null | Exact Epitope | null | MhcLigandElution | 28538037 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454592 | LSGGTTMYPGIADRMQKEITALAPSTMK. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LSGGTTMYPGIADRMQKEITALAPSTMK | 28 | null | 299 | 326 | 9606 | P60709.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538038 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454593 | LSLEGDHSTPPSAYGSVKA. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LSLEGDHSTPPSAYGSVKA | 19 | null | 11 | 29 | 9606 | P07355.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538039 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454595 | LSVSEVGTQTSITTACAGTQTAVITR. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LSVSEVGTQTSITTACAGTQTAVITR | 26 | null | 402 | 427 | 9606 | Q9H4H8.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538040 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454596 | LTKMKEIAEAYLGKTVTNAV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LTKMKEIAEAYLGKTVTNAV | 20 | null | 124 | 143 | 9606 | P11142.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538041 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454598 | LTLKYPIEHGIITNWDDM. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LTLKYPIEHGIITNWDDM | 18 | null | 67 | 84 | 9606 | P62736.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538042 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454598 | LTLKYPIEHGIITNWDDM. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LTLKYPIEHGIITNWDDM | 18 | null | 67 | 84 | 9606 | P62736.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538043 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454599 | LTLKYPIEHGIITNWDDME. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LTLKYPIEHGIITNWDDME | 19 | null | 67 | 85 | 9606 | P62736.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538044 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 554071 | LTLKYPIEHGIITNWDDMEKI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LTLKYPIEHGIITNWDDMEKI | 21 | null | 67 | 87 | 9606 | P62736.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538045 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454600 | LTLKYPIEHGIITNWDDMEKIWHHTFY. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LTLKYPIEHGIITNWDDMEKIWHHTFY | 27 | null | 67 | 93 | 9606 | P68032.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538046 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454602 | LVAIFHKYSGREGDKHTLSKKELKE. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LVAIFHKYSGREGDKHTLSKKELKE | 25 | null | 12 | 36 | 9606 | P06703.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538048 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454603 | LVAIFHKYSGREGDKHTLSKKELKELI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LVAIFHKYSGREGDKHTLSKKELKELI | 27 | null | 12 | 38 | 9606 | P06703.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538049 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454604 | LVDVLEDKLKGEMMDLQHGSLF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LVDVLEDKLKGEMMDLQHGSLF | 22 | null | 51 | 72 | 9606 | P07195.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538050 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454605 | LVDVLEDKLKGEMMDLQHGSLFL. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LVDVLEDKLKGEMMDLQHGSLFL | 23 | null | 51 | 73 | 9606 | P07195.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538051 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454606 | LVENGKKVKVNKDDIQKMNPPKFSKVEDMAEL. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LVENGKKVKVNKDDIQKMNPPKFSKVEDMAEL | 32 | null | 58 | 89 | 9606 | P35579.4 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538052 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454609 | LVNAIINSGPREDSTRI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LVNAIINSGPREDSTRI | 17 | null | 112 | 128 | 9606 | P46782.4 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538054 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454610 | LVRELEKKFSGKHVVF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LVRELEKKFSGKHVVF | 16 | null | 79 | 94 | 9606 | P62081.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538055 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454611 | LVRELEKKFSGKHVVFI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LVRELEKKFSGKHVVFI | 17 | null | 79 | 95 | 9606 | P62081.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538056 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454611 | LVRELEKKFSGKHVVFI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LVRELEKKFSGKHVVFI | 17 | null | 79 | 95 | 9606 | P62081.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538057 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454612 | LVSKHRAQVIYTRNTKGGDAPAAGEDA. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LVSKHRAQVIYTRNTKGGDAPAAGEDA | 27 | null | 99 | 125 | 9606 | P62851.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538058 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454614 | LVWVPSDKSGFEPASLKEEVGE. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LVWVPSDKSGFEPASLKEEVGE | 22 | null | 31 | 52 | 9606 | P35579.4 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538061 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454615 | LVWVPSDKSGFEPASLKEEVGEEAI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LVWVPSDKSGFEPASLKEEVGEEAI | 25 | null | 31 | 55 | 9606 | P35579.4 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538062 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454616 | LYASGRTTGIVMDSGDGVTHTVPIYEGY. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LYASGRTTGIVMDSGDGVTHTVPIYEGY | 28 | null | 142 | 169 | 9606 | P60709.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538063 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454616 | LYASGRTTGIVMDSGDGVTHTVPIYEGY. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LYASGRTTGIVMDSGDGVTHTVPIYEGY | 28 | null | 142 | 169 | 9606 | P60709.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538064 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 554149 | LYDATYETKESKKEDLV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LYDATYETKESKKEDLV | 17 | null | 84 | 100 | 9606 | P23528.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538065 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454617 | LYDSMKGKGTRDKVLI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LYDSMKGKGTRDKVLI | 16 | null | 274 | 289 | 9606 | P07355.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538066 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454618 | LYKAGENRWGTDEDKFT. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LYKAGENRWGTDEDKFT | 17 | null | 182 | 198 | 9606 | P12429.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538067 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1393177 | LYLKVKGNVFKNKRI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LYLKVKGNVFKNKRI | 15 | null | 123 | 137 | 9606 | P84098.1 | null | Exact Epitope | null | MhcLigandElution | 28538068 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454619 | LYLKVKGNVFKNKRIIL. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LYLKVKGNVFKNKRIIL | 17 | null | null | null | 32644 | null | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538069 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454620 | LYREAPINKKGNFN. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LYREAPINKKGNFN | 14 | null | 118 | 131 | 9606 | EAX03725.1 | null | Exact Epitope | null | MhcLigandElution | 28538070 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454621 | LYREAPINKKGNFNY. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LYREAPINKKGNFNY | 15 | null | 118 | 132 | 9606 | EAX03725.1 | null | Exact Epitope | null | MhcLigandElution | 28538071 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454622 | LYREAPINKKGNFNYI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LYREAPINKKGNFNYI | 16 | null | 118 | 133 | 9606 | EAX03725.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538072 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 762948 | LYVDKNFINNPLAQADW. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LYVDKNFINNPLAQADW | 17 | null | 10 | 26 | 9606 | P35579.4 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538073 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454623 | LYVDKNFINNPLAQADWA. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LYVDKNFINNPLAQADWA | 18 | null | 10 | 27 | 9606 | P35579.4 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538074 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454624 | LYVDKNFINNPLAQADWAAKKLV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | LYVDKNFINNPLAQADWAAKKLV | 23 | null | 10 | 32 | 9606 | P35579.4 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538075 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454625 | MAGEKVEKPDTKEKKPEAKK. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MAGEKVEKPDTKEKKPEAKK | 20 | null | 1 | 20 | 9606 | Q02878.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538076 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454626 | MEHIHKLKADKARK. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MEHIHKLKADKARK | 14 | null | 139 | 152 | 9606 | P84098.1 | null | Exact Epitope | null | MhcLigandElution | 28538077 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454627 | MEKAGAHLQGGAKRV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MEKAGAHLQGGAKRV | 15 | null | 105 | 119 | 9606 | P04406.3 | null | Exact Epitope | null | MhcLigandElution | 28538078 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454628 | MEKAGAHLQGGAKRVIISAPSADAPMF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MEKAGAHLQGGAKRVIISAPSADAPMF | 27 | null | 105 | 131 | 9606 | P04406.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538079 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454629 | MEKAGAHLQGGAKRVIISAPSADAPMFV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MEKAGAHLQGGAKRVIISAPSADAPMFV | 28 | null | 105 | 132 | 9606 | P04406.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538080 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454630 | MEKAGAHLQGGAKRVIISAPSADAPMFVM. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MEKAGAHLQGGAKRVIISAPSADAPMFVM | 29 | null | 105 | 133 | 9606 | P04406.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538081 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454631 | MFGEKLNGTDPEDVIRNAF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MFGEKLNGTDPEDVIRNAF | 19 | null | 89 | 107 | 9606 | O14950.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538082 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454632 | MFGEKLNGTDPEDVIRNAFA. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MFGEKLNGTDPEDVIRNAFA | 20 | null | 89 | 108 | 9606 | O14950.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538083 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454634 | MFRSVPTSTVFYPSDGVATEKAV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MFRSVPTSTVFYPSDGVATEKAV | 23 | null | 436 | 458 | 9606 | P29401.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538085 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454635 | MFTFHKFAGDKGYLTKEDLR. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MFTFHKFAGDKGYLTKEDLR | 20 | null | 13 | 32 | 9606 | P60903.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538086 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454636 | MGKVKVGVNGFGRI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MGKVKVGVNGFGRI | 14 | null | 1 | 14 | 9606 | P04406.3 | null | Exact Epitope | null | MhcLigandElution | 28538087 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454636 | MGKVKVGVNGFGRI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MGKVKVGVNGFGRI | 14 | null | 1 | 14 | 9606 | P04406.3 | null | Exact Epitope | null | MhcLigandElution | 28538088 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454637 | MGVNHEKYDNSLKIISNAS. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MGVNHEKYDNSLKIISNAS | 19 | null | 133 | 151 | 9606 | P04406.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538089 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454639 | MLFFLIMNFLEGKDASAFAAKMRG. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MLFFLIMNFLEGKDASAFAAKMRG | 24 | null | 123 | 146 | 9606 | Q9NR77.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538090 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454641 | MLQVLGPKPALPAGTEDTAKEDAANRKLAKLY. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MLQVLGPKPALPAGTEDTAKEDAANRKLAKLY | 32 | null | 270 | 301 | 9606 | P06396.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538092 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454642 | MMARKMKDTDSEEEIRE. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MMARKMKDTDSEEEIRE | 17 | null | 72 | 88 | 9606 | P0DP23.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538093 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454645 | MPGVTVKDVNQQEF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MPGVTVKDVNQQEF | 14 | null | 1 | 14 | 9606 | P39019.2 | null | Exact Epitope | null | MhcLigandElution | 28538095 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454645 | MPGVTVKDVNQQEF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MPGVTVKDVNQQEF | 14 | null | 1 | 14 | 9606 | P39019.2 | null | Exact Epitope | null | MhcLigandElution | 28538094 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454646 | MPYQYPALTPEQKKELSDIAHRIVAPGKGILA. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MPYQYPALTPEQKKELSDIAHRIVAPGKGILA | 32 | null | 1 | 32 | 9606 | P04075.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538096 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454650 | MVAKKDVHMPKHPELADKNVPNLHVMKAM. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MVAKKDVHMPKHPELADKNVPNLHVMKAM | 29 | null | 21 | 49 | 9606 | P46783.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538097 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454651 | MVVEHPEFLKAGKEPGLQIWR. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MVVEHPEFLKAGKEPGLQIWR | 21 | null | 52 | 72 | 9606 | P06396.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538098 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 8 |
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