xml_file stringlengths 5 11 | reference_id stringlengths 1 7 | date_last_updated stringclasses 487
values | pubmed_id stringlengths 5 8 ⌀ | article_year int64 1.95k 2.03k ⌀ | article_title stringlengths 23 347 ⌀ | journal_title stringlengths 3 197 ⌀ | authors stringlengths 5 2.35k ⌀ | epitope_id stringlengths 1 7 ⌀ | epitope_name stringlengths 1 85 ⌀ | epitope_structure_type stringclasses 8
values | epitope_chemical_type stringclasses 18
values | linear_sequence stringlengths 1 829 ⌀ | linear_sequence_length int64 1 829 ⌀ | discontinuous_residues stringlengths 2 419 ⌀ | starting_position int64 0 34.8k ⌀ | ending_position int64 3 34.8k ⌀ | source_organism_id stringlengths 1 8 ⌀ | source_molecule_genbank_id stringlengths 4 14 ⌀ | reference_region stringlengths 2 409 ⌀ | epitope_structure_defines stringclasses 4
values | epitope_evidence_code stringclasses 6
values | assay_category stringclasses 4
values | assay_id stringlengths 2 8 | assay_type_id stringclasses 412
values | assay_location_of_data stringlengths 4 126 ⌀ | qualitative_measurement stringclasses 5
values | is_positive bool 2
classes | quantitative_measurement stringlengths 3 25 ⌀ | host_organism_id stringclasses 729
values | host_sex stringclasses 2
values | host_age stringlengths 1 39 ⌀ | disease_state stringclasses 666
values | mhc_allele_id stringclasses 868
values | mhc_allele_types_present stringlengths 1 150 ⌀ | cell_type stringclasses 41
values | cell_tissue_type stringclasses 49
values | cell_culture_conditions stringclasses 9
values | antigen_evidence_code stringclasses 6
values | immunogen_evidence_code stringclasses 6
values | assay_comments stringclasses 0
values | split_bucket int64 1 9 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454652 | MWISKQEYDESGPSIVHRK. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MWISKQEYDESGPSIVHRK | 19 | null | 1,055 | 1,073 | 9606 | A5A3E0.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538099 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454652 | MWISKQEYDESGPSIVHRK. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MWISKQEYDESGPSIVHRK | 19 | null | 1,055 | 1,073 | 9606 | A5A3E0.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538100 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454653 | MWISKQEYDESGPSIVHRKC. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MWISKQEYDESGPSIVHRKC | 20 | null | 1,055 | 1,074 | 9606 | A5A3E0.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538101 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454653 | MWISKQEYDESGPSIVHRKC. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MWISKQEYDESGPSIVHRKC | 20 | null | 1,055 | 1,074 | 9606 | A5A3E0.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538102 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454654 | MWISKQEYSESSPSIVHRKC. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MWISKQEYSESSPSIVHRKC | 20 | null | null | null | 32644 | null | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538103 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454655 | MYKGKKRHEMPPHIYA. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MYKGKKRHEMPPHIYA | 16 | null | 137 | 152 | 9606 | P35579.4 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538104 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454656 | MYKTDLEKDIISDTSGDFR. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MYKTDLEKDIISDTSGDFR | 19 | null | 150 | 168 | 9606 | P07355.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538105 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1111048 | MYREAPIDKKGNFN. | FragmentOfANaturalSequenceMolecule | Peptide from protein | MYREAPIDKKGNFN | 14 | null | 142 | 155 | 9606 | P24844.4 | null | Exact Epitope | null | MhcLigandElution | 28538106 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454660 | NDALINQKYDEVMATYILLGR. | FragmentOfANaturalSequenceMolecule | Peptide from protein | NDALINQKYDEVMATYILLGR | 21 | null | 350 | 370 | 9606 | Q9P0L2.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538107 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454660 | NDALINQKYDEVMATYILLGR. | FragmentOfANaturalSequenceMolecule | Peptide from protein | NDALINQKYDEVMATYILLGR | 21 | null | 350 | 370 | 9606 | Q9P0L2.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538108 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454662 | NGHVTIPGQQDKDMFQETMEAM. | FragmentOfANaturalSequenceMolecule | Peptide from protein | NGHVTIPGQQDKDMFQETMEAM | 22 | null | 305 | 326 | 9606 | P35579.4 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538110 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454665 | NLAHCLQIVCDWTDYDER. | FragmentOfANaturalSequenceMolecule | Peptide from protein | NLAHCLQIVCDWTDYDER | 18 | null | 468 | 485 | 9606 | O15294.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538111 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454666 | NMIDQNRDGFINKEDLHDMLV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | NMIDQNRDGFINKEDLHDMLV | 21 | null | 15 | 35 | 9606 | EAX03725.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538112 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454667 | NMLEPSANMPWFKGWKV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | NMLEPSANMPWFKGWKV | 17 | null | 200 | 216 | 9606 | P68104.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538113 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454671 | NTLPTKETIEQEKRS. | FragmentOfANaturalSequenceMolecule | Peptide from protein | NTLPTKETIEQEKRS | 15 | null | 27 | 41 | 9606 | P63313.2 | null | Exact Epitope | null | MhcLigandElution | 28538114 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454671 | NTLPTKETIEQEKRS. | FragmentOfANaturalSequenceMolecule | Peptide from protein | NTLPTKETIEQEKRS | 15 | null | 27 | 41 | 9606 | P63313.2 | null | Exact Epitope | null | MhcLigandElution | 28538115 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454674 | NVGKLLKGIDRYNPENLA. | FragmentOfANaturalSequenceMolecule | Peptide from protein | NVGKLLKGIDRYNPENLA | 18 | null | 10 | 27 | 9606 | Q9UBQ5.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538117 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454678 | PKPPKPVSKMRM. | FragmentOfANaturalSequenceMolecule | Peptide from protein | PKPPKPVSKMRM | 12 | null | 98 | 109 | 9606 | P04233.3 | null | Exact Epitope | null | MhcLigandElution | 28538120 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454680 | PPCVGGVPG. | FragmentOfANaturalSequenceMolecule | Peptide from protein | PPCVGGVPG | 9 | null | null | null | 32644 | null | null | Exact Epitope | null | MhcLigandElution | 28538121 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454683 | PSRPLTFMGSQTKRV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | PSRPLTFMGSQTKRV | 15 | null | 45 | 59 | 9606 | Q8N5P9.1 | null | Exact Epitope | null | MhcLigandElution | 28538122 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454687 | QDVANNTNEEAGDGTTTATVLARS. | FragmentOfANaturalSequenceMolecule | Peptide from protein | QDVANNTNEEAGDGTTTATVLARS | 24 | null | 99 | 122 | 9606 | P10809.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538124 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454688 | QETIDKTANQASDTFSGIGKKF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | QETIDKTANQASDTFSGIGKKF | 22 | null | 51 | 72 | 9606 | Q15847.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538125 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454695 | QSNPSPQLRSVMKVESSENVPSPKH. | FragmentOfANaturalSequenceMolecule | Peptide from protein | QSNPSPQLRSVMKVESSENVPSPKH | 25 | null | 128 | 152 | 9606 | P0DQW0.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538126 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454702 | QTVAVGVIKAVDKKA. | FragmentOfANaturalSequenceMolecule | Peptide from protein | QTVAVGVIKAVDKKA | 15 | null | 431 | 445 | 9606 | P68104.1 | null | Exact Epitope | null | MhcLigandElution | 28538127 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454703 | QTVAVGVIKN. | FragmentOfANaturalSequenceMolecule | Peptide from protein | QTVAVGVIKN | 10 | null | 431 | 440 | 9606 | Q05639.1 | null | Exact Epitope | null | MhcLigandElution | 28538128 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454706 | QVFKSFYNETYFERHA. | FragmentOfANaturalSequenceMolecule | Peptide from protein | QVFKSFYNETYFERHA | 16 | null | null | null | 32644 | null | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538129 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 929850 | QVINETSQHHDDLE. | FragmentOfANaturalSequenceMolecule | Peptide from protein | QVINETSQHHDDLE | 14 | null | 453 | 466 | 9606 | P08670.4 | null | Exact Epitope | null | MhcLigandElution | 28538130 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454708 | QWLGGSSWPGYVRPLPPAAIESP. | FragmentOfANaturalSequenceMolecule | Peptide from protein | QWLGGSSWPGYVRPLPPAAIESP | 23 | null | 44 | 66 | 9606 | P04792.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538131 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454709 | QWLGGSSWPGYVRPLPPAAIESPAVAAPAYSRA. | FragmentOfANaturalSequenceMolecule | Peptide from protein | QWLGGSSWPGYVRPLPPAAIESPAVAAPAYSRA | 33 | null | 44 | 76 | 9606 | P04792.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538132 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454713 | RATGGGLSSVGGGSSTIKYTTTSSSSRK. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RATGGGLSSVGGGSSTIKYTTTSSSSRK | 28 | null | 533 | 560 | 9606 | P04259.5 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538133 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454714 | RAVGRLEAVSHTSDMHRG. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RAVGRLEAVSHTSDMHRG | 18 | null | 13 | 30 | 9606 | Q01518.5 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538134 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1268450 | RDGKLVSESSDVLPK. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RDGKLVSESSDVLPK | 15 | null | 469 | 483 | 9606 | P05787.7 | null | Exact Epitope | null | MhcLigandElution | 28538135 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1268450 | RDGKLVSESSDVLPK. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RDGKLVSESSDVLPK | 15 | null | 469 | 483 | 9606 | P05787.7 | null | Exact Epitope | null | MhcLigandElution | 28538136 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454715 | RDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGM. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGM | 35 | null | 197 | 231 | 9606 | P04406.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538137 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454716 | RDLRGKKKEELLKQLDDLK. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RDLRGKKKEELLKQLDDLK | 19 | null | 7 | 25 | 9606 | P42766.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538138 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454717 | REASSGGGGSSSNFHINVEESVDGQVVSSHKRE. | FragmentOfANaturalSequenceMolecule | Peptide from protein | REASSGGGGSSSNFHINVEESVDGQVVSSHKRE | 33 | null | 423 | 455 | 9606 | P19012.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538139 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454719 | REGDKHTLSKKELKELI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | REGDKHTLSKKELKELI | 17 | null | 22 | 38 | 9606 | P06703.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538140 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454721 | RGGSLLAGGGGFGGGSLSGGGGSRS. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RGGSLLAGGGGFGGGSLSGGGGSRS | 25 | null | 19 | 43 | 9606 | P19012.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538141 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454722 | RGNVAGDSKNDPPMEAAGFTAQV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RGNVAGDSKNDPPMEAAGFTAQV | 23 | null | 322 | 344 | 9606 | P68104.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538142 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454724 | RHQGVMVGMGQKDSYVGDEAQSKRG. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RHQGVMVGMGQKDSYVGDEAQSKRG | 25 | null | 39 | 63 | 9606 | P60709.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538144 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454724 | RHQGVMVGMGQKDSYVGDEAQSKRG. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RHQGVMVGMGQKDSYVGDEAQSKRG | 25 | null | 39 | 63 | 9606 | P60709.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538145 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454726 | RIKVGRDYVQKAQTKEQADF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RIKVGRDYVQKAQTKEQADF | 20 | null | 393 | 412 | 9606 | P35579.4 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538147 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2229021 | RIVDGKVVSETNDTKV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RIVDGKVVSETNDTKV | 16 | null | 412 | 427 | 9606 | P05783.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538148 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454728 | RKQPPVSPGTALVGSQKEPSEVPTPKR. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RKQPPVSPGTALVGSQKEPSEVPTPKR | 27 | null | 30 | 56 | 9606 | P17096.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538149 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454730 | RKVVGDVAYDEAKERA. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RKVVGDVAYDEAKERA | 16 | null | 250 | 265 | 9606 | P11586.4 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538150 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454731 | RLEKPAKYDDIKKVVKQASEGPLKGILGY. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RLEKPAKYDDIKKVVKQASEGPLKGILGY | 29 | null | 248 | 276 | 9606 | P04406.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538151 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1114772 | RLREKDKHIEEVRKN. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RLREKDKHIEEVRKN | 15 | null | 122 | 136 | 9606 | P16949.3 | null | Exact Epitope | null | MhcLigandElution | 28538152 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454733 | RMKLPKPPKPVSKMRM. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RMKLPKPPKPVSKMRM | 16 | null | 94 | 109 | 9606 | P04233.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538153 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454734 | RMMKKLDTNSDGQLDF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RMMKKLDTNSDGQLDF | 16 | null | 62 | 77 | 9606 | P31949.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538154 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454735 | RNNGKKLMTVRIVKHAFE. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RNNGKKLMTVRIVKHAFE | 18 | null | 81 | 98 | 9606 | P46782.4 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538155 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454739 | RRIVDGKVVSETNDTKV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RRIVDGKVVSETNDTKV | 17 | null | 411 | 427 | 9606 | P05783.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538156 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454739 | RRIVDGKVVSETNDTKV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RRIVDGKVVSETNDTKV | 17 | null | 411 | 427 | 9606 | P05783.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538157 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454740 | RRIVDGKVVSETNDTKVLR. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RRIVDGKVVSETNDTKVLR | 19 | null | 411 | 429 | 9606 | P05783.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538158 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2387823 | RRIVDGKVVSETNDTKVLRH. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RRIVDGKVVSETNDTKVLRH | 20 | null | 411 | 430 | 9606 | P05783.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538159 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454741 | RRKEPKSQDIYLRL. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RRKEPKSQDIYLRL | 14 | null | 14 | 27 | 9606 | Q07020.2 | null | Exact Epitope | null | MhcLigandElution | 28538160 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454742 | RRLRPGTGCCHPSLPF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RRLRPGTGCCHPSLPF | 16 | null | 110 | 125 | 9606 | Q8N1N1.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538161 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1272911 | RSKALKASAPAPGHH. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RSKALKASAPAPGHH | 15 | null | 44 | 58 | 9606 | P56378.1 | null | Exact Epitope | null | MhcLigandElution | 28538162 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454744 | RSLGSVQAPSYGARPVSSAASVYAGAGGSGSRI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RSLGSVQAPSYGARPVSSAASVYAGAGGSGSRI | 33 | null | 14 | 46 | 9606 | P05783.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538163 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454744 | RSLGSVQAPSYGARPVSSAASVYAGAGGSGSRI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RSLGSVQAPSYGARPVSSAASVYAGAGGSGSRI | 33 | null | 14 | 46 | 9606 | P05783.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538164 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454745 | RSVPHLQKVFDRYKSYSPYDMLE. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RSVPHLQKVFDRYKSYSPYDMLE | 23 | null | 220 | 242 | 9606 | P07355.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538165 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 555793 | RTIEKFEKEAAEMGKG. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RTIEKFEKEAAEMGKG | 16 | null | 37 | 52 | 9606 | P68104.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538166 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 555793 | RTIEKFEKEAAEMGKG. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RTIEKFEKEAAEMGKG | 16 | null | 37 | 52 | 9606 | P68104.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538167 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454749 | RTYNRVPLHKPTDWQKKILI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RTYNRVPLHKPTDWQKKILI | 20 | null | 53 | 72 | 9606 | Q96A26.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538168 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454750 | RVAVEAKNPADLPKL. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RVAVEAKNPADLPKL | 15 | null | 506 | 520 | 9606 | P13639.4 | null | Exact Epitope | null | MhcLigandElution | 28538169 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454751 | RVERIMSETYMLIKQVDE. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RVERIMSETYMLIKQVDE | 18 | null | 1,880 | 1,897 | 9606 | Q9Y6J0.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538170 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454759 | RYMGKGVSKP. | FragmentOfANaturalSequenceMolecule | Peptide from protein | RYMGKGVSKP | 10 | null | 56 | 65 | 9606 | L0R849.1 | null | Exact Epitope | null | MhcLigandElution | 28538172 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454763 | SEPPKLKIPLRT. | FragmentOfANaturalSequenceMolecule | Peptide from protein | SEPPKLKIPLRT | 12 | null | null | null | 32644 | null | null | Exact Epitope | null | MhcLigandElution | 28538173 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1116513 | SGRTTGIVMDSGDGVTHTVPIYEGY. | FragmentOfANaturalSequenceMolecule | Peptide from protein | SGRTTGIVMDSGDGVTHTVPIYEGY | 25 | null | 145 | 169 | 9606 | P60709.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538174 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1116513 | SGRTTGIVMDSGDGVTHTVPIYEGY. | FragmentOfANaturalSequenceMolecule | Peptide from protein | SGRTTGIVMDSGDGVTHTVPIYEGY | 25 | null | 145 | 169 | 9606 | P60709.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538175 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454770 | SLSAKPAPPKPEPKPKR. | FragmentOfANaturalSequenceMolecule | Peptide from protein | SLSAKPAPPKPEPKPKR | 17 | null | null | null | 32644 | null | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538176 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454780 | STPTLTPTDTFQTVETLTCLSLERNRL. | FragmentOfANaturalSequenceMolecule | Peptide from protein | STPTLTPTDTFQTVETLTCLSLERNRL | 27 | null | 507 | 533 | 9606 | Q8TAM1.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538177 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 7 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 144492 | SYELPDGQVITIGNERFR. | FragmentOfANaturalSequenceMolecule | Peptide from protein | SYELPDGQVITIGNERFR | 18 | null | 939 | 956 | 9606 | A5A3E0.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538178 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1118748 | TALAPSTMKIKIIAPPERKY. | FragmentOfANaturalSequenceMolecule | Peptide from protein | TALAPSTMKIKIIAPPERKY | 20 | null | 318 | 337 | 9606 | P60709.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538179 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1118748 | TALAPSTMKIKIIAPPERKY. | FragmentOfANaturalSequenceMolecule | Peptide from protein | TALAPSTMKIKIIAPPERKY | 20 | null | 318 | 337 | 9606 | P60709.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538180 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 1 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1118751 | TALAPSTMKIKIIAPPERKYSV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | TALAPSTMKIKIIAPPERKYSV | 22 | null | 318 | 339 | 9606 | P60709.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538182 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454791 | TFHKFAGDKGYLTKEDLR. | FragmentOfANaturalSequenceMolecule | Peptide from protein | TFHKFAGDKGYLTKEDLR | 18 | null | 15 | 32 | 9606 | P60903.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538183 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454793 | TIIDAPGHRDFIKN. | FragmentOfANaturalSequenceMolecule | Peptide from protein | TIIDAPGHRDFIKN | 14 | null | 88 | 101 | 9606 | P68104.1 | null | Exact Epitope | null | MhcLigandElution | 28538184 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454798 | TPSALAILENANVLARYASICQQNGIVPIV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | TPSALAILENANVLARYASICQQNGIVPIV | 30 | null | 158 | 187 | 9606 | P09972.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538185 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454802 | TRVALLEQQVLI. | FragmentOfANaturalSequenceMolecule | Peptide from protein | TRVALLEQQVLI | 12 | null | 187 | 198 | 9606 | H0Y432.1 | null | Exact Epitope | null | MhcLigandElution | 28538187 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454805 | TVHAITATQKTVDGPSGKLWRD. | FragmentOfANaturalSequenceMolecule | Peptide from protein | TVHAITATQKTVDGPSGKLWRD | 22 | null | 177 | 198 | 9606 | P04406.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538188 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454806 | TYRKLLEGEESRLESGMQNMS. | FragmentOfANaturalSequenceMolecule | Peptide from protein | TYRKLLEGEESRLESGMQNMS | 21 | null | 390 | 410 | 9606 | P05787.7 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538189 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454808 | VAKANSLEPEPWFFKNLSR. | FragmentOfANaturalSequenceMolecule | Peptide from protein | VAKANSLEPEPWFFKNLSR | 19 | null | 116 | 134 | 9606 | P06239.6 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538191 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 4 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454810 | VFQKYAGKDGYNYTL. | FragmentOfANaturalSequenceMolecule | Peptide from protein | VFQKYAGKDGYNYTL | 15 | null | 20 | 34 | 9606 | P31949.2 | null | Exact Epitope | null | MhcLigandElution | 28538192 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454811 | VFQKYAGKDGYNYTLS. | FragmentOfANaturalSequenceMolecule | Peptide from protein | VFQKYAGKDGYNYTLS | 16 | null | 20 | 35 | 9606 | P31949.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538193 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454812 | VFQNHFEPGVYVCA. | FragmentOfANaturalSequenceMolecule | Peptide from protein | VFQNHFEPGVYVCA | 14 | null | 11 | 24 | 9606 | Q9NZV6.3 | null | Exact Epitope | null | MhcLigandElution | 28538194 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 6 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454818 | VSLWTLTSGTSSVNSPTKCIIKTV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | VSLWTLTSGTSSVNSPTKCIIKTV | 24 | null | 212 | 235 | 9606 | Q658K5.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538195 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454831 | WFCPECAAPGVVLAADAGPVS. | FragmentOfANaturalSequenceMolecule | Peptide from protein | WFCPECAAPGVVLAADAGPVS | 21 | null | 225 | 245 | 9606 | Q9P1Y6.3 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538196 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 120312 | WISKQEYDESGPSIVHRK. | FragmentOfANaturalSequenceMolecule | Peptide from protein | WISKQEYDESGPSIVHRK | 18 | null | 1,056 | 1,073 | 9606 | A5A3E0.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538197 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 120312 | WISKQEYDESGPSIVHRK. | FragmentOfANaturalSequenceMolecule | Peptide from protein | WISKQEYDESGPSIVHRK | 18 | null | 1,056 | 1,073 | 9606 | A5A3E0.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538198 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1060359 | WISKQEYDESGPSIVHRKC. | FragmentOfANaturalSequenceMolecule | Peptide from protein | WISKQEYDESGPSIVHRKC | 19 | null | 1,056 | 1,074 | 9606 | A5A3E0.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538199 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1060359 | WISKQEYDESGPSIVHRKC. | FragmentOfANaturalSequenceMolecule | Peptide from protein | WISKQEYDESGPSIVHRKC | 19 | null | 1,056 | 1,074 | 9606 | A5A3E0.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538200 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454832 | WYARQDEQLQKTKANNRAAEEAF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | WYARQDEQLQKTKANNRAAEEAF | 23 | null | 146 | 168 | 9606 | P09496-2.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538201 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454832 | WYARQDEQLQKTKANNRAAEEAF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | WYARQDEQLQKTKANNRAAEEAF | 23 | null | 146 | 168 | 9606 | P09496-2.1 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538202 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 9 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 779693 | YFVVHMKQKGKK. | FragmentOfANaturalSequenceMolecule | Peptide from protein | YFVVHMKQKGKK | 12 | null | 86 | 97 | 9606 | P60903.2 | null | Exact Epitope | null | MhcLigandElution | 28538203 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 8 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454833 | YGNKADIISTVEFNH. | FragmentOfANaturalSequenceMolecule | Peptide from protein | YGNKADIISTVEFNH | 15 | null | 9 | 23 | 9606 | Q00005-6.1 | null | Exact Epitope | null | MhcLigandElution | 28538204 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 3 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1304357 | YIDENQDRYIKKLAKWV. | FragmentOfANaturalSequenceMolecule | Peptide from protein | YIDENQDRYIKKLAKWV | 17 | null | 10 | 26 | 9606 | Q96KP4.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538205 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454834 | YIKKIGYNPDTVAF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | YIKKIGYNPDTVAF | 14 | null | 177 | 190 | 9606 | P68104.1 | null | Exact Epitope | null | MhcLigandElution | 28538206 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454834 | YIKKIGYNPDTVAF. | FragmentOfANaturalSequenceMolecule | Peptide from protein | YIKKIGYNPDTVAF | 14 | null | 177 | 190 | 9606 | P68104.1 | null | Exact Epitope | null | MhcLigandElution | 28538207 | 91 | Supplemental Table 2 | Positive | true | null | null | null | null | null | 326 | 63 413 | null | null | null | null | null | null | 5 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 1304499 | YIQQDTKGDYQKALL. | FragmentOfANaturalSequenceMolecule | Peptide from protein | YIQQDTKGDYQKALL | 15 | null | 318 | 332 | 9606 | P07355.2 | null | Exact Epitope | null | MhcLigandElution | 28538208 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 2 |
1048212.xml | 1048212 | 2026-04-17-07:00 | 22942358 | 2,012 | Major histocompatibility complex class II+ invariant chain negative breast cancer cells present unique peptides that activate tumor-specific T cells from breast cancer patients. | Molecular & cellular proteomics : MCP | Olesya Chornoguz; Alexei Gapeev; Michael C O'Neill; Suzanne Ostrand-Rosenberg | 2454835 | YKCSDCGKAFTTKSGLNVHQRK. | FragmentOfANaturalSequenceMolecule | Peptide from protein | YKCSDCGKAFTTKSGLNVHQRK | 22 | null | 680 | 701 | 9606 | Q8N8J6.2 | null | Epitope containing region/antigenic site | null | MhcLigandElution | 28538209 | 91 | Supplemental Table 1 | Positive | true | null | null | null | null | null | 350 | null | null | null | null | null | null | null | 4 |
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