interpro_id string | interpro_numeric_id int64 | name string | short_name string | entry_type string | protein_count int64 | is_llm bool | is_llm_reviewed bool | abstract string | go_ids list | go_terms list | go_categories list | go_count int64 | member_databases list | member_accessions list | member_names list | member_protein_counts list | member_count int64 | external_databases list | external_accessions list | external_xrefs list | external_xref_count int64 | pdb_ids list | structure_count int64 | publication_ids list | pubmed_ids list | publication_titles list | publication_years list | publication_count int64 | parent_ids list | child_ids list | parent_count int64 | child_count int64 | tree_depth float64 | taxonomy_names list | taxonomy_protein_counts list | taxonomy_count int64 | key_species_names list | key_species_protein_counts list | key_species_count int64 | in_entry_list bool | entry_list_type string | entry_list_name string | names_dat_name string | short_names_dat_name string | split_bucket int64 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
IPR054142 | 54,142 | AppA, SCHIC domain | AppA_SCHIC | Domain | 15 | false | false | This domain is found at the C-terminal end of AppA protein from Rhodobacter sphaeroides and similar sequences from alphaproteobacteria. AppA is a light-sensing antirepressor involved in oxygen and light control of photosynthesis-gene expression. This protein senses blue-light via its N-terminal blue-light using FAD (BL... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21966"
] | [
"AppA_SCHIC"
] | [
15
] | 1 | [] | [] | [] | 0 | [
"4heh",
"4hh0",
"4hh1",
"4hh3"
] | 4 | [
"PUB00153821",
"PUB00153822"
] | [
"23982072",
"23728293"
] | [
"Redox and light control the heme-sensing activity of AppA.",
"A ternary AppA-PpsR-DNA complex mediates light regulation of photosynthesis-related gene expression."
] | [
2013,
2013
] | 2 | [] | [] | 0 | 0 | null | [
"Alphaproteobacteria"
] | [
15
] | 1 | [] | [] | 0 | true | Domain | AppA, SCHIC domain | AppA, SCHIC domain | AppA_SCHIC | 2 |
IPR054143 | 54,143 | Mannosylglycerate synthase, C-terminal domain | MGS_C | Domain | 33 | false | false | Mannosylglycerate synthase catalyses the formation of the stress protectant 2-O-alpha-D-mannosyl glycerate [ ]. It consists of an N-terminal GT-like domain and a C-terminal helical domain, which is represented in this entry, that is apparently involved in protein oligomerization [ ]. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21967"
] | [
"MGS_C"
] | [
33
] | 1 | [] | [] | [] | 0 | [
"2bo4",
"2bo6",
"2bo7",
"2bo8",
"2y4j",
"2y4k",
"2y4l",
"2y4m"
] | 8 | [
"PUB00039698"
] | [
"15951819"
] | [
"Structural dissection and high-throughput screening of mannosylglycerate synthase."
] | [
2005
] | 1 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Eukaryota"
] | [
4,
29
] | 2 | [] | [] | 0 | true | Domain | Mannosylglycerate synthase, C-terminal domain | Mannosylglycerate synthase, C-terminal domain | MGS_C | 9 |
IPR054144 | 54,144 | TcdA1, receptor binding domain 1 | TcdA1_RBD_1 | Domain | 22 | false | false | This domain is found in TcdA1 from Photorhabdus luminescens and similar sequences from proteobacteria. TcdA1 is one of the three subunits of the Tc toxins. TcdA1 acts as an injecting device responsible for translocating the actual toxic component into host cells. TcA has four receptor-binding domains. This domain is on... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21968"
] | [
"TcdA1_RBD_3"
] | [
22
] | 1 | [] | [] | [] | 0 | [
"4o9y",
"5lkh",
"5lki",
"6h6e",
"6h6f",
"6l7e",
"6rw6",
"6sue",
"6suf",
"8cpz",
"8cq0",
"8cq2"
] | 12 | [
"PUB00091290",
"PUB00154263"
] | [
"24572368",
"31663026"
] | [
"Mechanism of Tc toxin action revealed in molecular detail.",
"Common architecture of Tc toxins from human and insect pathogenic bacteria."
] | [
2014,
2019
] | 2 | [] | [] | 0 | 0 | null | [
"Enterobacterales"
] | [
22
] | 1 | [] | [] | 0 | true | Domain | TcdA1, receptor binding domain 1 | TcdA1, receptor binding domain 1 | TcdA1_RBD_1 | 5 |
IPR054145 | 54,145 | Mannosylglycerate synthase, GT domain | MGS_GT | Domain | 82 | false | false | Mannosylglycerate synthase catalyses the formation of the stress protectant 2-O-alpha-D-mannosyl glycerate [ ]. It consists of a N-terminal GT-like domain and a C-terminal helical domain [ ]. This entry represents the N-terminal glycosyltransferase domain (GT) which, at the sequence level, is most similar to family-GT2... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21969"
] | [
"MGS_GT"
] | [
82
] | 1 | [] | [] | [] | 0 | [
"2bo4",
"2bo6",
"2bo7",
"2bo8",
"2y4j",
"2y4k",
"2y4l",
"2y4m"
] | 8 | [
"PUB00039698",
"PUB00061138"
] | [
"15951819",
"21288903"
] | [
"Structural dissection and high-throughput screening of mannosylglycerate synthase.",
"Substrate and metal ion promiscuity in mannosylglycerate synthase."
] | [
2005,
2011
] | 2 | [] | [] | 0 | 0 | null | [
"Archaea",
"Bacteria",
"Eukaryota",
"anaerobic digester metagenome"
] | [
22,
19,
40,
1
] | 4 | [] | [] | 0 | true | Domain | Mannosylglycerate synthase, GT domain | Mannosylglycerate synthase, GT domain | MGS_GT | 1 |
IPR054146 | 54,146 | HOXB-AS3 peptide | HOXB-AS3 | Family | 3 | false | false | This family represents human HOXB-AS3 peptide, a 53-residues peptide that suppresses colon cancer (CRC) growth but is associated with a poor prognosis in oral squamous cell carcinoma (OSCC) [ , ]. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21970"
] | [
"HOXB-AS3"
] | [
3
] | 1 | [] | [] | [] | 0 | [] | 0 | [
"PUB00154011",
"PUB00154012"
] | [
"34457052",
"28985503"
] | [
"A micro-peptide encoded by HOXB-AS3 promotes the proliferation and viability of oral squamous cell carcinoma cell lines by directly binding with IGF2BP2 to stabilize c-Myc.",
"A Peptide Encoded by a Putative lncRNA HOXB-AS3 Suppresses Colon Cancer Growth."
] | [
2021,
2017
] | 2 | [] | [] | 0 | 0 | null | [
"Catarrhini"
] | [
3
] | 1 | [
"Homo sapiens"
] | [
1
] | 1 | true | Family | HOXB-AS3 peptide | HOXB-AS3 peptide | HOXB-AS3 | 3 |
IPR054147 | 54,147 | Transcriptional regulator PINT87aa | LINC-PINT | Family | 3 | false | false | This protein family represents human Transcriptional regulator PINT87aa (LINC-PINT), an 87-residues peptide encoded by a circular RNA (circRNA) that suppresses glioblastoma cell proliferation in vitro and in vivo. It has been established as a biomarker and a key regulator of cellular senescence in hepatocellular carcin... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21971"
] | [
"LINC-PINT"
] | [
3
] | 1 | [] | [] | [] | 0 | [] | 0 | [
"PUB00103428",
"PUB00154039"
] | [
"33754036",
"30367041"
] | [
"Cellular senescence in hepatocellular carcinoma induced by a long non-coding RNA-encoded peptide PINT87aa by blocking FOXM1-mediated <i>PHB2</i>.",
"A peptide encoded by circular form of LINC-PINT suppresses oncogenic transcriptional elongation in glioblastoma."
] | [
2021,
2018
] | 2 | [] | [] | 0 | 0 | null | [
"Boreoeutheria"
] | [
3
] | 1 | [
"Homo sapiens",
"Rattus norvegicus"
] | [
1,
1
] | 2 | true | Family | Transcriptional regulator PINT87aa | Transcriptional regulator PINT87aa | LINC-PINT | 4 |
IPR054148 | 54,148 | ASNSD1 upstream open reading frame protein | ASNSD1-SEP | Family | 466 | false | false | This family includes human ASNSD1 upstream open reading frame protein (ASNSD1-SEP, for small/short open reading frame -encoded polypeptide) and similar sequences predominantly found in vertebrates. ASNSD1-SEP is a subunit of the prefoldin-like (PFDL) module of the PAQosome, an 11-subunit chaperone involved in the bioge... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21975"
] | [
"ASNSD1-SEP"
] | [
466
] | 1 | [] | [] | [] | 0 | [] | 0 | [
"PUB00153829"
] | [
"31738558"
] | [
"Upstream ORF-Encoded ASDURF Is a Novel Prefoldin-like Subunit of the PAQosome."
] | [
2020
] | 1 | [] | [] | 0 | 0 | null | [
"Eukaryota"
] | [
466
] | 1 | [
"Danio rerio",
"Homo sapiens",
"Mus musculus",
"Rattus norvegicus"
] | [
1,
5,
1,
1
] | 4 | true | Family | ASNSD1 upstream open reading frame protein | ASNSD1 upstream open reading frame protein | ASNSD1-SEP | 4 |
IPR054149 | 54,149 | Small integral membrane protein 43 | SMIM43 | Family | 110 | false | false | This protein family includes human Small integral membrane protein 43 (SMIM43, also known as NEMEP) and similar sequences from vertebrates. This protein has been associated with HIV and hepatitis C infection as well as with brain tumours and probably with essential tremor, cerebellar atrophy and other disorders [ ]. It... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21976"
] | [
"SMIM43"
] | [
110
] | 1 | [] | [] | [] | 0 | [] | 0 | [
"PUB00154238",
"PUB00154433"
] | [
"37077524",
"35810171"
] | [
"Gene dysregulation in acute HIV-1 infection - early transcriptomic analysis reveals the crucial biological functions affected.",
"A Nodal enhanced micropeptide NEMEP regulates glucose uptake during mesendoderm differentiation of embryonic stem cells."
] | [
2023,
2022
] | 2 | [] | [] | 0 | 0 | null | [
"Euteleostomi"
] | [
110
] | 1 | [
"Homo sapiens",
"Mus musculus",
"Rattus norvegicus"
] | [
1,
1,
1
] | 3 | true | Family | Small integral membrane protein 43 | Small integral membrane protein 43 | SMIM43 | 4 |
IPR054150 | 54,150 | Transcriptional regulator SEHBP | SEHBP | Family | 4 | false | false | This protein family represents human Transcriptional regulator SEHBP (short ORF-encoded histone binding protein), a conserved microprotein that interacts with chromatin-associated proteins and acts as a transcription factor [ ]. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21978"
] | [
"SEHBP"
] | [
4
] | 1 | [] | [] | [] | 0 | [] | 0 | [
"PUB00154227"
] | [
"33468658"
] | [
"A short ORF-encoded transcriptional regulator."
] | [
2021
] | 1 | [] | [] | 0 | 0 | null | [
"Boreoeutheria"
] | [
4
] | 1 | [
"Homo sapiens",
"Mus musculus"
] | [
1,
1
] | 2 | true | Family | Transcriptional regulator SEHBP | Transcriptional regulator SEHBP | SEHBP | 2 |
IPR054151 | 54,151 | TR61B, FKBP-like domain | TR61B_FKBP-like | Domain | 863 | false | false | This is the FKBP-like domain found towards the N-terminal of TR61B (tRNA (adenine(58)-N(1))-methyltransferase) from human and similar proteins. This mitochondrion-specific protein catalyses the formation of N1-methyladenine at position 58 (m1A58) in various tRNAs [ ] and the formation of 1-methyladenosine at position 9... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21985"
] | [
"TR61B_FKBP-like"
] | [
863
] | 1 | [
"REACTOME",
"REACTOME"
] | [
"R-HSA-6787450",
"R-HSA-9937008"
] | [
"REACTOME:R-HSA-6787450",
"REACTOME:R-HSA-9937008"
] | 2 | [
"2b25"
] | 1 | [
"PUB00154295",
"PUB00154296"
] | [
"23097428",
"27631568"
] | [
"Trmt61B is a methyltransferase responsible for 1-methyladenosine at position 58 of human mitochondrial tRNAs.",
"Mitochondrial 16S rRNA Is Methylated by tRNA Methyltransferase TRMT61B in All Vertebrates."
] | [
2012,
2016
] | 2 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Caldiarchaeum subterraneum",
"Opisthokonta"
] | [
4,
1,
858
] | 3 | [
"Danio rerio",
"Homo sapiens",
"Rattus norvegicus"
] | [
1,
2,
1
] | 3 | true | Domain | TR61B, FKBP-like domain | TR61B, FKBP-like domain | TR61B_FKBP-like | 1 |
IPR054152 | 54,152 | YajR, YAM domain | YajR_YAM | Domain | 2,728 | false | false | This entry represents the C-terminal YAM domain of YajR, an Escherichia coli transporter that belongs to the major facilitator superfamily and similar bacterial proteins. The YAM domain precise regulatory role is not yet known, it may sense environmental changes, such as pH and halogen ion variation [ , ]. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21987"
] | [
"YajR_YAM"
] | [
2728
] | 1 | [] | [] | [] | 0 | [
"2ru9",
"3wdo",
"4q2l",
"4q2m"
] | 4 | [
"PUB00143352",
"PUB00143353"
] | [
"23950222",
"24952155"
] | [
"Structure of the YajR transporter suggests a transport mechanism based on the conserved motif A.",
"Atomic resolution structure of the E. coli YajR transporter YAM domain."
] | [
2013,
2014
] | 2 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Eukaryota",
"ecological metagenomes"
] | [
2714,
4,
10
] | 3 | [
"Escherichia coli (strain K12)",
"Homo sapiens"
] | [
1,
1
] | 2 | true | Domain | YajR, YAM domain | YajR, YAM domain | YajR_YAM | 2 |
IPR054153 | 54,153 | Tailspike protein, galactose-binding domain-like | G7C_GBD | Domain | 8 | false | false | This entry represents the Tailspike galactose-binding domain-like domain, also known as domain 5 (d5) of the tailspike receptor-binding protein (RBP) gp63.1 of bacteriophage G7C. This domain is structurally similar to carbohydrate-binding modules (CBMs) and is involved in substrate binding. Specifically, gp63.1 deacety... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21988"
] | [
"G7C_GBD"
] | [
8
] | 1 | [] | [] | [] | 0 | [
"4qnl"
] | 1 | [
"PUB00091258"
] | [
"28513100"
] | [
"Function of bacteriophage G7C esterase tailspike in host cell adsorption."
] | [
2017
] | 1 | [] | [] | 0 | 0 | null | [
"Caudoviricetes",
"Enterobacterales"
] | [
3,
5
] | 2 | [] | [] | 0 | true | Domain | Tailspike protein, galactose-binding domain-like | Tailspike protein, galactose-binding domain-like | G7C_GBD | 4 |
IPR054154 | 54,154 | Peroxisomal membrane protein PEX14, central, plants | PEX14-like_M_plants | Domain | 1,182 | false | false | This domain is centrally located in Peroxisomal membrane protein PEX14 from Arabidopsis thaliana and similar plant sequences. PEX14 is a component of the PEX13-PEX14 docking complex, a translocon channel that specifically mediates the import of peroxisomal cargo proteins bound to PEX5 receptor. It is often found C-term... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF23020"
] | [
"PEX14-like_2nd"
] | [
1182
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Eukaryota"
] | [
1182
] | 1 | [
"Arabidopsis thaliana",
"Oryza sativa subsp. japonica",
"Zea mays"
] | [
3,
6,
48
] | 3 | true | Domain | Peroxisomal membrane protein PEX14, central, plants | Peroxisomal membrane protein PEX14, central, plants | PEX14-like_M_plants | 6 |
IPR054156 | 54,156 | Transcriptional regulator LmrA/YxaF-like, C-terminal domain | YxaF_TetR_C | Domain | 9,032 | false | false | This entry represents the C-terminal domain found in a group of TetR transcription regulators, including YxaF (also known as T1414) [ ] and LmrA from Bacillus subtilis, which are paralogous to each other [ ]. LmrA and YxaF are repressors that bind specifically to almost the same cis sequences, LmrA/YxaF boxes, located ... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21993"
] | [
"TetR_C_13_2"
] | [
9032
] | 1 | [] | [] | [] | 0 | [
"1sgm",
"3dpj",
"3on4"
] | 3 | [
"PUB00037610",
"PUB00154270"
] | [
"16475182",
"17483215"
] | [
"Crystal structure of a putative HTH-type transcriptional regulator yxaF from Bacillus subtilis.",
"Dual regulation of the Bacillus subtilis regulon comprising the lmrAB and yxaGH operons and yxaF gene by two transcriptional repressors, LmrA and YxaF, in response to flavonoids."
] | [
2006,
2007
] | 2 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Eukaryota",
"Methanobacteriota",
"ecological metagenomes"
] | [
8984,
5,
12,
31
] | 4 | [] | [] | 0 | true | Domain | Transcriptional regulator LmrA/YxaF-like, C-terminal domain | Transcriptional regulator LmrA/YxaF-like, C-terminal domain | YxaF_TetR_C | 9 |
IPR054158 | 54,158 | B12-dependent ribonucleotide reductase, insertion domain | RNR-II_ins_dom | Domain | 1,607 | false | false | This entry represents the insertion domain of adenosylcobalamin-dependent ribonucleoside-triphosphate reductases (class II RNRs) from Lactococcus leichmannii and related sequences. RNR's are responsible for the conversion of the ribose sugar of RNA into the deoxyribose sugar of DNA, a rate-limiting step of DNA biosynth... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21995"
] | [
"RNR-II_ins_dom"
] | [
1607
] | 1 | [
"EC"
] | [
"1.17.4.2"
] | [
"EC:1.17.4.2"
] | 1 | [
"1l1l"
] | 1 | [
"PUB00007088"
] | [
"11875520"
] | [
"The crystal structure of class II ribonucleotide reductase reveals how an allosterically regulated monomer mimics a dimer."
] | [
2002
] | 1 | [] | [] | 0 | 0 | null | [
"Archaea",
"Bacteria",
"Eukaryota",
"Viruses",
"metagenomes"
] | [
4,
882,
182,
480,
59
] | 5 | [] | [] | 0 | true | Domain | B12-dependent ribonucleotide reductase, insertion domain | B12-dependent ribonucleotide reductase, insertion domain | RNR-II_ins_dom | 9 |
IPR054160 | 54,160 | MrkD-like, receptor binding domain | MrkD_recept-bd | Domain | 1,443 | false | false | This entry represents the receptor binding domain of MrkD from Klebsiella pneumoniae and similar sequences [ ]. MkrD is an adhesin protein that specifically interacts with type IV and/or V collagen [ ]. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22003"
] | [
"MrkDrd"
] | [
1443
] | 1 | [
"REACTOME"
] | [
"R-HSA-9638630"
] | [
"REACTOME:R-HSA-9638630"
] | 1 | [
"3u4k",
"8dez",
"8df0",
"8dka",
"9q1h"
] | 5 | [
"PUB00154079"
] | [
"22988966"
] | [
"Crystal structure of the MrkD1P receptor binding domain of Klebsiella pneumoniae and identification of the human collagen V binding interface."
] | [
2012
] | 1 | [] | [] | 0 | 0 | null | [
"Opisthokonta",
"Pseudomonadati"
] | [
5,
1438
] | 2 | [] | [] | 0 | true | Domain | MrkD-like, receptor binding domain | MrkD-like, receptor binding domain | MrkD_recept-bd | 3 |
IPR054161 | 54,161 | Small regulatory polypeptide of amino acid response | SPAR | Family | 97 | false | false | This family represents human small regulatory polypeptide of amino acid response (SPAR) and similar sequences from vertebrates. SPAR interacts with the lysosomal v-ATPase to negatively regulate the activation of the signalling complex mTORC1 upon stimulation with amino acids. It also acts as a regulator of muscle regen... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22004"
] | [
"SPAR"
] | [
97
] | 1 | [] | [] | [] | 0 | [] | 0 | [
"PUB00154239"
] | [
"28024296"
] | [
"mTORC1 and muscle regeneration are regulated by the LINC00961-encoded SPAR polypeptide."
] | [
2017
] | 1 | [] | [] | 0 | 0 | null | [
"Eutheria"
] | [
97
] | 1 | [
"Homo sapiens",
"Mus musculus",
"Rattus norvegicus"
] | [
1,
1,
2
] | 3 | true | Family | Small regulatory polypeptide of amino acid response | Small regulatory polypeptide of amino acid response | SPAR | 2 |
IPR054162 | 54,162 | DUF6293, C-terminal winged helix domain | DUF6293_C | Domain | 430 | false | false | This domain is found C-terminal in functionally uncharacterised archaeal proteins. This domain is predicted to adopt a winged helix domain structure. It is usually associated to . | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22665"
] | [
"WHD_DUF6293"
] | [
430
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Archaea",
"Bacteria",
"ecological metagenomes"
] | [
403,
16,
11
] | 3 | [] | [] | 0 | true | Domain | DUF6293, C-terminal winged helix domain | DUF6293, C-terminal winged helix domain | DUF6293_C | 6 |
IPR054163 | 54,163 | LPP20 lipofamily protein, C-terminal domain | HP1454-like_C | Domain | 109 | false | false | This domain is found at the C-terminal end of LPP20 lipofamily protein from Helicobacter pylori (HP1454) and similar sequences predominantly found in epsilonproteobacteria. HP1454 is a secreted protein composed of three distinct domains: the N-terminal ( ), the middle domain ( ) and this domain, which shows a β-sheet f... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22017"
] | [
"HP1454-like_C"
] | [
109
] | 1 | [] | [] | [] | 0 | [
"4kzs"
] | 1 | [
"PUB00154013"
] | [
"24854568"
] | [
"Crystal structure of the secreted protein HP1454 from the human pathogen Helicobacter pylori."
] | [
2014
] | 1 | [] | [] | 0 | 0 | null | [
"Helicobacter"
] | [
109
] | 1 | [] | [] | 0 | true | Domain | LPP20 lipofamily protein, C-terminal domain | LPP20 lipofamily protein, C-terminal domain | HP1454-like_C | 3 |
IPR054164 | 54,164 | Restriction endonuclease BpuSI, specificity domain | BpuSI_TRD | Domain | 26 | false | false | This domain is found at the C-terminal of the restriction endonuclease BpuSI from Bacillus pumilus ( ) and similar bacterial sequences. BpuSI is a Type IIG restriction endonuclease that consists of three functional domains: an N-terminal domain , a N-6 DNA methylase domain and a C-terminal specificity domain (TRD, this... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22008"
] | [
"BpuSI_TRD"
] | [
26
] | 1 | [] | [] | [] | 0 | [
"3s1s"
] | 1 | [
"PUB00069815"
] | [
"21724614"
] | [
"Characterization and crystal structure of the type IIG restriction endonuclease RM.BpuSI."
] | [
2011
] | 1 | [] | [] | 0 | 0 | null | [
"Bacteria",
"hydrothermal vent metagenome"
] | [
25,
1
] | 2 | [] | [] | 0 | true | Domain | Restriction endonuclease BpuSI, specificity domain | Restriction endonuclease BpuSI, specificity domain | BpuSI_TRD | 8 |
IPR054165 | 54,165 | LPP20 lipofamily protein, middle domain | HP1454-like_M | Domain | 106 | false | false | This domain is found in LPP20 lipofamily protein from Helicobacter pylori (HP1454) and similar sequences mainly found in epsilonproteobacteria. HP1454 is a secreted protein composed of three distinct domains: the N-terminal ( ), this domain and the C-terminal ( ). This domain forms an anti-parallel three-helix bundle [... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22018"
] | [
"HP1454-like_middle_dom"
] | [
106
] | 1 | [] | [] | [] | 0 | [
"4kzs"
] | 1 | [
"PUB00154013"
] | [
"24854568"
] | [
"Crystal structure of the secreted protein HP1454 from the human pathogen Helicobacter pylori."
] | [
2014
] | 1 | [] | [] | 0 | 0 | null | [
"Helicobacter"
] | [
106
] | 1 | [] | [] | 0 | true | Domain | LPP20 lipofamily protein, middle domain | LPP20 lipofamily protein, middle domain | HP1454-like_M | 6 |
IPR054166 | 54,166 | Tyrosine-protein kinase receptor torso, third FN3 domain | Tor_FN3_3nd | Domain | 70 | false | false | This domain is found in the Tyrosine-protein kinase receptor torso from Bombyx mori (Tor), which is involved in the initiation of metamorphosis during postembryonic development. This protein is organised into three consecutive fibronectin type III (FN3) domains and a C-terminal Kinase domain. This entry represents the ... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF23008"
] | [
"FN3_Tor_3rd"
] | [
70
] | 1 | [] | [] | [] | 0 | [] | 0 | [
"PUB00151810"
] | [
"26698662"
] | [
"Structural Basis of Neurohormone Perception by the Receptor Tyrosine Kinase Torso."
] | [
2015
] | 1 | [] | [] | 0 | 0 | null | [
"Eukaryota"
] | [
70
] | 1 | [] | [] | 0 | true | Domain | Tyrosine-protein kinase receptor torso, third FN3 domain | Tyrosine-protein kinase receptor torso, third FN3 domain | Tor_FN3_3nd | 7 |
IPR054167 | 54,167 | Tyrosine-protein kinase receptor torso, first FN3 domain | Tor_FN3_1st | Domain | 48 | false | false | This domain is found in the Tyrosine-protein kinase receptor torso from Bombyx mori (Tor), which is involved in the initiation of metamorphosis during postembryonic development. This protein is organised into three consecutive fibronectin type III (FN3) domains and a C-terminal kinase domain. This entry represents the ... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF23006"
] | [
"Tor_FN3_1st"
] | [
48
] | 1 | [] | [] | [] | 0 | [
"5aoq"
] | 1 | [
"PUB00151810"
] | [
"26698662"
] | [
"Structural Basis of Neurohormone Perception by the Receptor Tyrosine Kinase Torso."
] | [
2015
] | 1 | [] | [] | 0 | 0 | null | [
"Eukaryota"
] | [
48
] | 1 | [] | [] | 0 | true | Domain | Tyrosine-protein kinase receptor torso, first FN3 domain | Tyrosine-protein kinase receptor torso, first FN3 domain | Tor_FN3_1st | 6 |
IPR054168 | 54,168 | PG_1098 ferredoxin-like domain | PG_1098_Fer | Domain | 2,532 | false | false | This entry represents a ferredoxin-like domain found in a group of poorly characterised sequences, including the putative methyltransferase PG_1098 from Porphyromonas gingivalis ( , ). Members of this entry contain a THUMP-like domain at the C-terminal ( ), following this domain. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22013"
] | [
"PG_1098_Fer"
] | [
2532
] | 1 | [] | [] | [] | 0 | [
"3ll7"
] | 1 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Microviridae sp. ctCVC7",
"Tanacetum cinerariifolium",
"metagenomes"
] | [
2503,
1,
1,
27
] | 4 | [] | [] | 0 | true | Domain | PG_1098 ferredoxin-like domain | PG_1098 ferredoxin-like domain | PG_1098_Fer | 7 |
IPR054169 | 54,169 | 1,4-alpha-glucan branching enzyme GlgB, N-terminal domain | GlgB_N | Domain | 12,116 | false | false | This is the N-terminal β-sandwich domain of 1,4-alpha-glucan branching enzyme GlgB and related proteins. This domain has a differential preference in substrate recognition and binding during amylase activity, when amylose is used as a substrate [ , , , ]. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22019"
] | [
"GlgB_N"
] | [
12116
] | 1 | [
"EC",
"METACYC",
"METACYC",
"METACYC"
] | [
"2.4.1.18",
"PWY-5067",
"PWY-622",
"PWY-7900"
] | [
"EC:2.4.1.18",
"METACYC:PWY-5067",
"METACYC:PWY-622",
"METACYC:PWY-7900"
] | 4 | [
"3k1d",
"5gqu",
"5gqv",
"5gqw",
"5gqx",
"5gqy",
"5gqz",
"5gr0",
"5gr1",
"5gr2",
"5gr3",
"5gr4",
"5gr5",
"5gr6",
"6klf"
] | 15 | [
"PUB00153973",
"PUB00153974",
"PUB00153975",
"PUB00153976"
] | [
"20444687",
"26280198",
"27139627",
"28193843"
] | [
"Crystal structure of full-length Mycobacterium tuberculosis H37Rv glycogen branching enzyme: insights of N-terminal beta-sandwich in substrate specificity and enzymatic activity.",
"Crystal Structures of Escherichia coli Branching Enzyme in Complex with Linear Oligosaccharides.",
"Crystal structures of Escheri... | [
2010,
2015,
2016,
2017
] | 4 | [] | [] | 0 | 0 | null | [
"Archaea",
"Bacteria",
"Eukaryota",
"metagenomes"
] | [
15,
11997,
10,
94
] | 4 | [
"Escherichia coli (strain K12)"
] | [
1
] | 1 | true | Domain | 1,4-alpha-glucan branching enzyme GlgB, N-terminal domain | 1,4-alpha-glucan branching enzyme GlgB, N-terminal domain | GlgB_N | 8 |
IPR054170 | 54,170 | RlmL, ferredoxin-like domain | RlmL_1st | Domain | 15,779 | false | false | This entry represents the ferredoxin-like domain found at the N-terminal of RmlL, referred to as NFLD domain usually fused to the THUMP domain [ ]. Ribosomal RNA large subunit methyltransferase K/L from E.coli (also known as YcbY) specifically methylates the guanine in positions 2445 and 2069 of 23S rRNA before its ass... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22020"
] | [
"RlmL_1st"
] | [
15779
] | 1 | [
"EC",
"EC"
] | [
"2.1.1.173",
"2.1.1.264"
] | [
"EC:2.1.1.173",
"EC:2.1.1.264"
] | 2 | [
"3k0b",
"3ldg",
"3ldu",
"3v8v",
"3v97"
] | 5 | [
"PUB00100798"
] | [
"22362734"
] | [
"Structure of the bifunctional methyltransferase YcbY (RlmKL) that adds the m7G2069 and m2G2445 modifications in Escherichia coli 23S rRNA."
] | [
2012
] | 1 | [] | [] | 0 | 0 | null | [
"Archaea",
"Bacteria",
"Eukaryota",
"unclassified sequences"
] | [
48,
15371,
215,
145
] | 4 | [
"Escherichia coli (strain K12)"
] | [
1
] | 1 | true | Domain | RlmL, ferredoxin-like domain | RlmL, ferredoxin-like domain | RlmL_1st | 9 |
IPR054171 | 54,171 | RbmA-like, FnIII domain | RbmA-like_FnIII | Domain | 54 | false | false | This entry represents both fibronectin type III (FnIII) domains found in Vibrio cholerae scaffolding protein RbmA ( ), a biofilm matrix protein essential for both maintenance of rugose colony morphology and development of wild-type biofilm architecture [ ]. RbmA contains two FnIII domains connected by a linker segment.... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22021"
] | [
"RbmA-like_FnIII"
] | [
54
] | 1 | [] | [] | [] | 0 | [
"4be5",
"4be6",
"4bei",
"4kkp",
"4kkq",
"4kkr",
"5g50"
] | 7 | [
"PUB00154194",
"PUB00154195"
] | [
"24340031",
"23687270"
] | [
"Structural insights into RbmA, a biofilm scaffolding protein of V. cholerae.",
"Structural basis for biofilm formation via the Vibrio cholerae matrix protein RbmA."
] | [
2013,
2013
] | 2 | [] | [] | 0 | 0 | null | [
"Pseudomonadati"
] | [
54
] | 1 | [] | [] | 0 | true | Domain | RbmA-like, FnIII domain | RbmA-like, FnIII domain | RbmA-like_FnIII | 7 |
IPR054172 | 54,172 | Major capsid protein VP16-like | VP16-like | Family | 28 | false | false | This family includes the major capsid protein VP16 from Thermus virus P23-77, which shows two turrets, producing a crenellated appearance [ ]. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22024"
] | [
"VP16-like"
] | [
28
] | 1 | [] | [] | [] | 0 | [
"3zmo",
"3zn4",
"3zn5",
"3zn6"
] | 4 | [
"PUB00067131"
] | [
"23623731"
] | [
"Bacteriophage p23-77 capsid protein structures reveal the archetype of an ancient branch from a major virus lineage."
] | [
2013
] | 1 | [] | [] | 0 | 0 | null | [
"Deinococci",
"Hukuchivirus",
"marine sediment metagenome"
] | [
25,
2,
1
] | 3 | [] | [] | 0 | true | Family | Major capsid protein VP16-like | Major capsid protein VP16-like | VP16-like | 8 |
IPR054174 | 54,174 | Alpha-amylase-like, C-terminal domain | Alpha-amylase-like_C | Domain | 1,405 | false | false | This is the C-terminal domain of Anoxybacillus alpha-amylase ( ) and related enzymes. This domain follows the catalytic β/α domain. It folds into a β-sandwich with a greek key topology ( ) [ , ]. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22026"
] | [
"Alpha-amylase_C_2"
] | [
1405
] | 1 | [] | [] | [] | 0 | [
"2wc7",
"2wcs",
"2wkg",
"4e2o",
"5a2a",
"5a2b",
"5a2c"
] | 7 | [
"PUB00059765",
"PUB00154425"
] | [
"19768689",
"26975884"
] | [
"Structural features of the Nostoc punctiforme debranching enzyme reveal the basis of its mechanism and substrate specificity.",
"Crystal structure of Anoxybacillus α-amylase provides insights into maltose binding of a new glycosyl hydrolase subclass."
] | [
2010,
2016
] | 2 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Opisthokonta",
"Thermococcaceae",
"bioreactor metagenome"
] | [
1397,
4,
3,
1
] | 4 | [] | [] | 0 | true | Domain | Alpha-amylase-like, C-terminal domain | Alpha-amylase-like, C-terminal domain | Alpha-amylase-like_C | 7 |
IPR054175 | 54,175 | NS3 RNA helicase, C-terminal helical domain | NS3_helicase_C | Domain | 25,179 | false | false | This entry represents the C-terminal all-α helical domain (referred to as domain 3) of hepatitis C virus RNA helicase (NS3) [ , , , , ]. NS3 helicase consists of three domains, separated by a series of clefts. Bound ssDNA lies in a channel that separates domain 3 from domains 1 and 2. The 5' end of the oligonucleotide ... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22027"
] | [
"NS3_helicase_C"
] | [
25179
] | 1 | [
"EC",
"EC",
"EC",
"EC",
"EC",
"METACYC",
"METACYC",
"METACYC",
"METACYC",
"METACYC",
"REACTOME",
"REACTOME"
] | [
"2.7.7.48",
"3.4.21.98",
"3.4.22.-",
"3.6.1.15",
"3.6.4.13",
"PWY-6545",
"PWY-7184",
"PWY-7185",
"PWY-7198",
"PWY-7210",
"R-HSA-5621480",
"R-HSA-8854214"
] | [
"EC:2.7.7.48",
"EC:3.4.21.98",
"EC:3.4.22.-",
"EC:3.6.1.15",
"EC:3.6.4.13",
"METACYC:PWY-6545",
"METACYC:PWY-7184",
"METACYC:PWY-7185",
"METACYC:PWY-7198",
"METACYC:PWY-7210",
"REACTOME:R-HSA-5621480",
"REACTOME:R-HSA-8854214"
] | 12 | [
"1a1v",
"1cu1",
"1hei",
"2f55",
"2zjo",
"3kqh",
"3kqk",
"3kql",
"3kqn",
"3kqu",
"3o8b",
"3o8c",
"3o8d",
"3o8r",
"3rvb",
"4a92",
"4b6e",
"4b6f",
"4b71",
"4b73",
"4b74",
"4b75",
"4b76",
"4ojq",
"4ok3",
"4ok5",
"4ok6",
"4oks",
"4wxp",
"4wxr",
"5e4f",
"5fps"... | 36 | [
"PUB00023240",
"PUB00025639",
"PUB00028307",
"PUB00040542",
"PUB00058566"
] | [
"9493270",
"9187654",
"10574797",
"16306038",
"20080715"
] | [
"Hepatitis C virus NS3 RNA helicase domain with a bound oligonucleotide: the crystal structure provides insights into the mode of unwinding.",
"Structure of the hepatitis C virus RNA helicase domain.",
"Molecular views of viral polyprotein processing revealed by the crystal structure of the hepatitis C virus bi... | [
1998,
1997,
1999,
2006,
2010
] | 5 | [] | [] | 0 | 0 | null | [
"Riboviria"
] | [
25179
] | 1 | [] | [] | 0 | true | Domain | NS3 RNA helicase, C-terminal helical domain | NS3 RNA helicase, C-terminal helical domain | NS3_helicase_C | 7 |
IPR054176 | 54,176 | Inner capsid protein lambda-1/VP3 | Lamba1_VP3 | Domain | 275 | false | false | The reovirus inner capsid protein lambda-1 displays nucleoside triphosphate phosphohydrolase (NTPase), RNA-5'-triphosphatase (RTPase), and RNA helicase activity and may play a role in the transcription of the virus genome, the unwinding or reannealing of double-stranded RNA during RNA synthesis. Lambda1 is an Orthoreov... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22033"
] | [
"Lamba1_VP3"
] | [
275
] | 1 | [] | [] | [] | 0 | [
"1ej6",
"2cse",
"3iyl",
"3k1q",
"5zvs",
"5zvt",
"6m99",
"6xf7",
"6xf8",
"6zts",
"6ztz",
"7elh",
"7yed",
"7yev",
"7yez",
"7yf0",
"7yfe",
"8fjk",
"8fjl",
"9cyx",
"9cyy"
] | 21 | [
"PUB00028441",
"PUB00040091",
"PUB00097604",
"PUB00129160",
"PUB00154032"
] | [
"10801118",
"16216585",
"20036256",
"20398923",
"32895380"
] | [
"Structure of the reovirus core at 3.6 A resolution.",
"Features of reovirus outer capsid protein mu1 revealed by electron cryomicroscopy and image reconstruction of the virion at 7.0 Angstrom resolution.",
"Backbone model of an aquareovirus virion by cryo-electron microscopy and bioinformatics.",
"3.3 A cryo... | [
2000,
2005,
2010,
2010,
2020
] | 5 | [] | [] | 0 | 0 | null | [
"Reovirales"
] | [
275
] | 1 | [] | [] | 0 | true | Domain | Inner capsid protein lambda-1/VP3 | Inner capsid protein lambda-1/VP3 | Lamba1_VP3 | 7 |
IPR054177 | 54,177 | Uncharacterized protein B-129, C2H2 zinc finger | B129_C2H2-Znf | Domain | 39 | false | false | This entry represents a C2H2 zinc finger found at the C-terminal of a group of poorly characterised viral and archaeal proteins, including the uncharacterised protein B-129 from Sulfolobus spindle-shape virus 1 (SSV1). | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22034"
] | [
"B129_C2H2-zf"
] | [
39
] | 1 | [] | [] | [] | 0 | [
"2wbt"
] | 1 | [] | [] | [] | [] | 0 | [
"IPR013087"
] | [] | 1 | 0 | 1 | [
"Fuselloviridae",
"Sulfolobaceae"
] | [
10,
29
] | 2 | [] | [] | 0 | true | Domain | Uncharacterized protein B-129, C2H2 zinc finger | Uncharacterized protein B-129, C2H2 zinc finger | B129_C2H2-Znf | 5 |
IPR054178 | 54,178 | Lpg0393-like, VPS9-like domain | Lpg0393-like_VPS9 | Domain | 92 | false | false | This entry represents the N-terminal domain of Lpg0393 and related proteins. Lpg0393 ( ) consists of two domains both of which are composed of α-helices. The N-terminal domain contains of seven helices and makes roughly a 90-degree angle with the C-terminal domain, that forms a helical bundle structure [ ]. The N-termi... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22035"
] | [
"Lpg0393_VPS9"
] | [
92
] | 1 | [] | [] | [] | 0 | [
"4r0g"
] | 1 | [
"PUB00091527"
] | [
"25821953"
] | [
"Lpg0393 of Legionella pneumophila is a guanine-nucleotide exchange factor for Rab5, Rab21 and Rab22."
] | [
2015
] | 1 | [] | [] | 0 | 0 | null | [
"Legionellales"
] | [
92
] | 1 | [] | [] | 0 | true | Domain | Lpg0393-like, VPS9-like domain | Lpg0393-like, VPS9-like domain | Lpg0393-like_VPS9 | 5 |
IPR054179 | 54,179 | PSD13, N-terminal | PSD13_N | Domain | 5,466 | false | false | This entry represents the N-terminal domain of PSD13 from human and its orthologues from yeast, RPN9, consisting of helical repeats [ , , , ]. These proteins are a component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This domain mediates interactio... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22037"
] | [
"PSD13_N"
] | [
5466
] | 1 | [
"REACTOME",
"REACTOME",
"REACTOME",
"REACTOME",
"REACTOME",
"REACTOME",
"REACTOME",
"REACTOME",
"REACTOME",
"REACTOME",
"REACTOME",
"REACTOME",
"REACTOME",
"REACTOME",
"REACTOME",
"REACTOME",
"REACTOME",
"REACTOME",
"REACTOME",
"REACTOME",
"REACTOME",
"REACTOME",
"REACTOM... | [
"R-BTA-1169091",
"R-BTA-1234176",
"R-BTA-1236978",
"R-BTA-174084",
"R-BTA-174154",
"R-BTA-174178",
"R-BTA-174184",
"R-BTA-187577",
"R-BTA-195253",
"R-BTA-202424",
"R-BTA-2467813",
"R-BTA-2871837",
"R-BTA-349425",
"R-BTA-350562",
"R-BTA-382556",
"R-BTA-450408",
"R-BTA-4608870",
"R-B... | [
"REACTOME:R-BTA-1169091",
"REACTOME:R-BTA-1234176",
"REACTOME:R-BTA-1236978",
"REACTOME:R-BTA-174084",
"REACTOME:R-BTA-174154",
"REACTOME:R-BTA-174178",
"REACTOME:R-BTA-174184",
"REACTOME:R-BTA-187577",
"REACTOME:R-BTA-195253",
"REACTOME:R-BTA-202424",
"REACTOME:R-BTA-2467813",
"REACTOME:R-BTA... | 316 | [
"2mqw",
"2mr3",
"2mri",
"3jck",
"3jco",
"3jcp",
"4cr2",
"4cr3",
"4cr4",
"5a5b",
"5gjq",
"5gjr",
"5l4k",
"5ln3",
"5m32",
"5mpb",
"5mpc",
"5mpd",
"5mpe",
"5t0c",
"5t0g",
"5t0h",
"5t0i",
"5t0j",
"5vfp",
"5vfq",
"5vfr",
"5vfs",
"5vft",
"5vfu",
"5vgz",
"5vhf"... | 113 | [
"PUB00091263",
"PUB00094315",
"PUB00110068",
"PUB00110070",
"PUB00152021"
] | [
"24706844",
"25631053",
"28689658",
"27428775",
"29636472"
] | [
"Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S proteasome.",
"Solution structure of yeast Rpn9: insights into proteasome lid assembly.",
"Conformational Landscape of the p28-Bound Human Proteasome Regulatory Particle.",
"An atomic structure of the human 26S pro... | [
2014,
2015,
2017,
2016,
2018
] | 5 | [] | [] | 0 | 0 | null | [
"Eukaryota"
] | [
5466
] | 1 | [
"Arabidopsis thaliana",
"Caenorhabditis elegans",
"Danio rerio",
"Drosophila melanogaster",
"Homo sapiens",
"Mus musculus",
"Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)",
"Oryza sativa subsp. japonica",
"Rattus norvegicus",
"Saccharomyces cerevisiae (strai... | [
7,
1,
2,
1,
13,
6,
1,
6,
6,
1,
1,
21
] | 12 | true | Domain | PSD13, N-terminal | PSD13, N-terminal | PSD13_N | 6 |
IPR054180 | 54,180 | DNA-binding protein H-NS-like, N-terminal domain | H-NS-like_N | Domain | 4,894 | false | false | This entry corresponds to the N-terminal oligomerisation domain of H-NS histone-like proteins [ , , , ]. The histone-like nucleoid-structuring (H-NS) protein is a DNA-binding protein implicated in transcriptional repression (silencing) as well as in bacterial chromosome organisation [ ]. H-NS binds tightly to AT-rich d... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22470"
] | [
"Histone_HNS_N"
] | [
4894
] | 1 | [] | [] | [] | 0 | [
"1lr1",
"1ni8",
"1ov9",
"2mw2",
"3nr7",
"4icg"
] | 6 | [
"PUB00001682",
"PUB00028901",
"PUB00029607",
"PUB00037269",
"PUB00064539",
"PUB00064590"
] | [
"7875316",
"12460581",
"14607110",
"12592399",
"18387844",
"20798056"
] | [
"Solution structure of the DNA binding domain of a nucleoid-associated protein, H-NS, from Escherichia coli.",
"H-NS oligomerization domain structure reveals the mechanism for high order self-association of the intact protein.",
"Crystal structure of the N-terminal dimerisation domain of VicH, the H-NS-like pro... | [
1995,
2002,
2003,
2003,
2008,
2010
] | 6 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Eukaryota",
"metagenomes"
] | [
4880,
10,
4
] | 3 | [
"Escherichia coli (strain K12)"
] | [
2
] | 1 | true | Domain | DNA-binding protein H-NS-like, N-terminal domain | DNA-binding protein H-NS-like, N-terminal domain | H-NS-like_N | 3 |
IPR054181 | 54,181 | Domain of unknown function DUF6888 | DUF6888 | Domain | 360 | false | false | This family of proteins is found in bacteria. Proteins in this family are approximately 60 amino acids in length. There is a conserved N-terminal MPT sequence motif. AlphaFold predicts that this protein is composed of an N-terminal α-helix followed by a four stranded β-sheet. AlphaFold also predicts the protein forms a... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21828"
] | [
"DUF6888"
] | [
360
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Cyanophyceae"
] | [
360
] | 1 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6888 | Domain of unknown function DUF6888 | DUF6888 | 3 |
IPR054182 | 54,182 | Protein of unknown function DUF6889 | DUF6889 | Family | 362 | false | false | This entry represents a family of small proteins that are largely composed of a single α-helix. Some members of the family are found on phage. The function of these proteins is unknown. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21829"
] | [
"DUF6889"
] | [
362
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Caudoviricetes",
"plant metagenome"
] | [
343,
17,
2
] | 3 | [] | [] | 0 | true | Family | Protein of unknown function DUF6889 | Protein of unknown function DUF6889 | DUF6889 | 8 |
IPR054184 | 54,184 | Protein of unknown function DUF6890 | DUF6890 | Family | 259 | false | false | This entry represents a family of small proteins composed largely of a single α-helix. Some proteins in this family are annotated as from phage. The function of these proteins is unknown. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21830"
] | [
"DUF6890"
] | [
259
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Caudoviricetes",
"Fusarium",
"metagenomes"
] | [
233,
11,
13,
2
] | 4 | [] | [] | 0 | true | Family | Protein of unknown function DUF6890 | Protein of unknown function DUF6890 | DUF6890 | 5 |
IPR054186 | 54,186 | Domain of unknown function DUF6891 | DUF6891 | Domain | 1,288 | false | false | This entry represents a domain of unknown function from uncharacterised proteins mainly found in bacteria. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21831"
] | [
"DUF6891"
] | [
1288
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Eukaryota",
"Methanobacteriaceae",
"Viruses",
"ecological metagenomes"
] | [
1193,
61,
23,
7,
4
] | 5 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6891 | Domain of unknown function DUF6891 | DUF6891 | 5 |
IPR054187 | 54,187 | Domain of unknown function DUF6892 | DUF6892 | Domain | 685 | false | false | This entry represents a domain found in uncharacterised bacterial proteins. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21832"
] | [
"DUF6892"
] | [
685
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"ecological metagenomes"
] | [
683,
2
] | 2 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6892 | Domain of unknown function DUF6892 | DUF6892 | 8 |
IPR054188 | 54,188 | Protein of unknown function DUF6893 | DUF6893 | Family | 351 | false | false | This entry represents a family of small proteins that are likely to have a signal peptide that takes up most of the sequence. Thus, a small peptide might be released from these proteins. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21833"
] | [
"DUF6893"
] | [
351
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria"
] | [
351
] | 1 | [] | [] | 0 | true | Family | Protein of unknown function DUF6893 | Protein of unknown function DUF6893 | DUF6893 | 5 |
IPR054189 | 54,189 | Domain of unknown function DUF6894 | DUF6894 | Domain | 3,993 | false | false | This entry represents a small protein domain found mainly in alphaproteobacteria. Its structure is composed of a four stranded β-sheet packed on one side by an α-helix. The function of these proteins is unknown. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21834"
] | [
"DUF6894"
] | [
3993
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Chiloscyllium punctatum",
"ecological metagenomes"
] | [
3989,
1,
3
] | 3 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6894 | Domain of unknown function DUF6894 | DUF6894 | 5 |
IPR054190 | 54,190 | Domain of unknown function DUF6895 | DUF6895 | Domain | 1,048 | false | false | This entry represents a domain found in a set of uncharacterised bacterial proteins. These proteins have a predicted 6-helical hairpin fold found in a wide range of glycosyl hydrolase enzymes, suggesting a potential function. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21836"
] | [
"DUF6895"
] | [
1048
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Eukaryota",
"Halobacteriales"
] | [
1028,
17,
3
] | 3 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6895 | Domain of unknown function DUF6895 | DUF6895 | 2 |
IPR054191 | 54,191 | Domain of unknown function DUF6896 | DUF6896 | Domain | 705 | false | false | This entry represents a domain found in bacterial proteins of unknown function. The domain structure includes a four stranded β-sheet which has two conserved aspartates in a DXDXG motif close to a highly conserved histidine. These three residues may for the potential active site. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21837"
] | [
"DUF6896"
] | [
705
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria"
] | [
705
] | 1 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6896 | Domain of unknown function DUF6896 | DUF6896 | 6 |
IPR054192 | 54,192 | Protein of unknown function DUF6897 | DUF6897 | Family | 136 | false | false | This entry represents a family of small prokaryotic proteins. They are predicted to adopt an SH3-like barrel structure that shows similarity to the C-terminal domain of the ribosomal chaperone RimP . | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21838"
] | [
"DUF6897"
] | [
136
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [
"IPR048163"
] | 0 | 1 | 0 | [
"Archaea",
"Bacteria",
"ecological metagenomes"
] | [
114,
17,
5
] | 3 | [] | [] | 0 | true | Family | Protein of unknown function DUF6897 | Protein of unknown function DUF6897 | DUF6897 | 1 |
IPR054193 | 54,193 | Domain of unknown function DUF6898 | DUF6898 | Domain | 379 | false | false | This entry represents a small protein that has a domain with a structure resembling a double stranded RNA-binding domain such as . Thus suggesting this protein may also have a dsRNA binding function. This is supported by the presence of several conserved positively charged residues. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21839"
] | [
"DUF6898"
] | [
379
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Pseudomonadati",
"metagenomes"
] | [
371,
8
] | 2 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6898 | Domain of unknown function DUF6898 | DUF6898 | 8 |
IPR054195 | 54,195 | Domain of unknown function DUF6900 | DUF6900 | Domain | 474 | false | false | This entry represents a small domain found in a range of bacterial and phage proteins. In a few proteins it is associated with . This region is composed of two α-helices. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21841"
] | [
"DUF6900"
] | [
474
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Caudoviricetes",
"metagenomes"
] | [
469,
3,
2
] | 3 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6900 | Domain of unknown function DUF6900 | DUF6900 | 1 |
IPR054196 | 54,196 | Protein of unknown function DUF6901 | DUF6901 | Family | 445 | false | false | This entry represents a family of uncharacterised bacterial proteins. They contain a β-sheet packed against an α-helical subdomain. This alignment contains three fully conserved cysteines that could form an Fe-S cluster or zinc-binding site in the predicted structures. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21842"
] | [
"DUF6901"
] | [
445
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"ecological metagenomes"
] | [
434,
11
] | 2 | [] | [] | 0 | true | Family | Protein of unknown function DUF6901 | Protein of unknown function DUF6901 | DUF6901 | 5 |
IPR054197 | 54,197 | Protein of unknown function DUF6902 | DUF6902 | Family | 196 | false | false | This entry represents a family of bacterial proteins that have an α/α(6) toroid structure. This suggests that these proteins are probably members of an uncharacterised family of glycosyl hydrolases. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21843"
] | [
"DUF6902"
] | [
196
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Rhodobacterales",
"marine sediment metagenome"
] | [
193,
3
] | 2 | [] | [] | 0 | true | Family | Protein of unknown function DUF6902 | Protein of unknown function DUF6902 | DUF6902 | 9 |
IPR054198 | 54,198 | Protein of unknown function DUF6903 | DUF6903 | Family | 304 | false | false | This entry represents a family of small putative bacterial integral membrane proteins with two transmembrane helices. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21844"
] | [
"DUF6903"
] | [
304
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"metagenomes"
] | [
302,
2
] | 2 | [] | [] | 0 | true | Family | Protein of unknown function DUF6903 | Protein of unknown function DUF6903 | DUF6903 | 4 |
IPR054199 | 54,199 | Protein of unknown function DUF6904 | DUF6904 | Family | 451 | false | false | This entry represents an uncharacterised family of bacterial proteins. Members of the family are about 250 residues in length and predicted to adopt an α/β globular structure. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21845"
] | [
"DUF6904"
] | [
451
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Tanacetum cinerariifolium",
"metagenomes"
] | [
448,
1,
2
] | 3 | [] | [] | 0 | true | Family | Protein of unknown function DUF6904 | Protein of unknown function DUF6904 | DUF6904 | 4 |
IPR054200 | 54,200 | Protein of unknown function DUF6905 | DUF6905 | Family | 363 | false | false | This entry represents a family of proteins that are annotated as Putative glycerol transporters ( ). Members of the family contain four potential transmembrane helices. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21846"
] | [
"DUF6905"
] | [
363
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Thermococcus paralvinellae",
"bioreactor metagenome"
] | [
358,
3,
2
] | 3 | [] | [] | 0 | true | Family | Protein of unknown function DUF6905 | Protein of unknown function DUF6905 | DUF6905 | 3 |
IPR054201 | 54,201 | Domain of unknown function DUF6906 | DUF6906 | Domain | 386 | false | false | This entry represents a small domain found in a range of phage and bacterial proteins. Structurally it is composed of a three stranded β-meander packed against an α-helix. The function of these proteins is unknown. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21847"
] | [
"DUF6906"
] | [
386
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacillota",
"Viruses",
"ecological metagenomes"
] | [
338,
44,
4
] | 3 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6906 | Domain of unknown function DUF6906 | DUF6906 | 9 |
IPR054203 | 54,203 | Domain of unknown function DUF6908 | DUF6908 | Domain | 326 | false | false | This family of proteins are uncharacterised. This family is distantly related to currently known as DUF1249. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21849"
] | [
"DUF6908"
] | [
326
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Archaea",
"Bacteria",
"Caudoviricetes",
"metagenomes"
] | [
29,
279,
3,
15
] | 4 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6908 | Domain of unknown function DUF6908 | DUF6908 | 8 |
IPR054204 | 54,204 | Protein of unknown function DUF6909 | DUF6909 | Family | 1,474 | false | false | This is a family of uncharacterised proteins. They are predicted to adopt a globular structure consisting of two domains. The predicted C-terminal domain share similarity with the catalytic domains of purine and uridine phosphorylases. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21850"
] | [
"DUF6909"
] | [
1474
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Eukaryota",
"Methanomicrobia",
"ecological metagenomes"
] | [
1363,
94,
6,
11
] | 4 | [] | [] | 0 | true | Family | Protein of unknown function DUF6909 | Protein of unknown function DUF6909 | DUF6909 | 4 |
IPR054205 | 54,205 | Protein of unknown function DUF6911 | DUF6911 | Family | 221 | false | false | This entry represents a family of uncharacterised proteins. Proteins in this family are primarily found in Proteobacteria. The structure of these proteins contains a six stranded antiparallel β-sheet and α-helices packed on one side of the sheet. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21852"
] | [
"DUF6911"
] | [
221
] | 1 | [] | [] | [] | 0 | [
"6anz"
] | 1 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria"
] | [
221
] | 1 | [] | [] | 0 | true | Family | Protein of unknown function DUF6911 | Protein of unknown function DUF6911 | DUF6911 | 8 |
IPR054206 | 54,206 | Protein of unknown function DUF6912 | DUF6912 | Family | 3,516 | false | false | This is a family of uncharacterised bacterial proteins. Their predicted structure shows some similarity to ADP-rybosylating toxins. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21853"
] | [
"DUF6912"
] | [
3516
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacillati",
"metagenomes"
] | [
3432,
84
] | 2 | [] | [] | 0 | true | Family | Protein of unknown function DUF6912 | Protein of unknown function DUF6912 | DUF6912 | 9 |
IPR054207 | 54,207 | Protein of unknown function DUF6913 | DUF6913 | Family | 1,146 | false | false | This is a family of uncharacterised bacterial proteins. They share remote similarity to both domains of proteins members of UDP-glycosyltransferase superfamily. In contrast to them, these proteins are predicted to consist of a single standalone domain. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21857"
] | [
"DUF6913"
] | [
1146
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"ecological metagenomes"
] | [
1119,
27
] | 2 | [] | [] | 0 | true | Family | Protein of unknown function DUF6913 | Protein of unknown function DUF6913 | DUF6913 | 8 |
IPR054208 | 54,208 | Protein of unknown function DUF6914 | DUF6914 | Family | 1,984 | false | false | This is a family of uncharacterised eukaryotic proteins. They are predicted to adopt a globular structure that resembles the conserved core of the PPPDE superfamily (after Permuted Papain fold Peptidases of DsRNA viruses and Eukaryotes) consisting of thiol peptidases with a circularly permuted papain-like fold. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21858"
] | [
"DUF6914"
] | [
1984
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Eukaryota"
] | [
1984
] | 1 | [] | [] | 0 | true | Family | Protein of unknown function DUF6914 | Protein of unknown function DUF6914 | DUF6914 | 3 |
IPR054209 | 54,209 | Domain of unknown function DUF6916 | DUF6916 | Domain | 1,344 | false | false | This is a domain of unknown function found in bacterial proteins. It is predicted to adopt a RIFT-type β(6)-barrel topology with a greater similarity to FAD-binding domains. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21880"
] | [
"DUF6916"
] | [
1344
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Fungi",
"Halobacteriales",
"ecological metagenomes"
] | [
1326,
3,
4,
11
] | 4 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6916 | Domain of unknown function DUF6916 | DUF6916 | 6 |
IPR054210 | 54,210 | Domain of unknown function DUF6917 | DUF6917 | Domain | 319 | false | false | This entry represents a domain in uncharacterised proteins is found in prokaryotes. Proteins in this family are typically between 135 and 154 amino acids in length. These proteins share significant sequence similarity to the central part of mammalian cell entry (MCE) protein MlaD. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21891"
] | [
"DUF6917"
] | [
319
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"marine metagenome",
"miscellaneous Crenarchaeota group-15 archaeon DG-45"
] | [
317,
1,
1
] | 3 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6917 | Domain of unknown function DUF6917 | DUF6917 | 9 |
IPR054211 | 54,211 | Protein of unknown function DUF6918 | DUF6918 | Family | 855 | false | false | This is a family of uncharacterised bacterial proteins with a length of ~140-150 residues. They are predicted to adopt an α-helical structure consisting of two structural repeats. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21893"
] | [
"DUF6918"
] | [
855
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"freshwater metagenome"
] | [
854,
1
] | 2 | [] | [] | 0 | true | Family | Protein of unknown function DUF6918 | Protein of unknown function DUF6918 | DUF6918 | 2 |
IPR054212 | 54,212 | Domain of unknown function DUF6919 | DUF6919 | Domain | 178 | false | false | This domain is found standalone or in combination with other domains mainly from bacteria. Its function is unknown but it has a significant sequence similarity to the C-terminal SAM-binding regulatory domain of 5,10-methylenetetrahydrofolate reductase (MTHFR). | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21897"
] | [
"DUF6919"
] | [
178
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Eukaryota",
"Viruses",
"viral metagenome"
] | [
129,
43,
5,
1
] | 4 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6919 | Domain of unknown function DUF6919 | DUF6919 | 4 |
IPR054213 | 54,213 | Protein of unknown function DUF6920 | DUF6920 | Family | 460 | false | false | This entry represents a set of uncharacterised proteins found in prokaryotes. They share remote similarity to LolA and LolB outer-membrane lipoproteins. Similar to LolA and LolB these proteins are predicted to have a hydrophobic cavity consisting of an unclosed β-barrel and an α-helical lid. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21900"
] | [
"DUF6920"
] | [
460
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Archaea",
"Bacteria",
"Eukaryota",
"ecological metagenomes"
] | [
47,
394,
11,
8
] | 4 | [] | [] | 0 | true | Family | Protein of unknown function DUF6920 | Protein of unknown function DUF6920 | DUF6920 | 5 |
IPR054215 | 54,215 | Domain of unknown function DUF6923 | DUF6923 | Domain | 1,966 | false | false | This entry represents a β-propeller domain composed of five blades. It is often found in large extracellular proteins in one or more copies. It is uncertain whether this domain might have an enzymatic function or a ligand binding function. Structurally this domain appears to have a sixfold symmetry, but one of the blad... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF21959"
] | [
"DUF6923"
] | [
1966
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Eukaryota",
"ecological metagenomes"
] | [
1516,
435,
15
] | 3 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6923 | Domain of unknown function DUF6923 | DUF6923 | 1 |
IPR054216 | 54,216 | Domain of unknown function DUF6930 | DUF6930 | Domain | 779 | false | false | This domain is found C-terminal in uncharacterised bacterial proteins. It is remotely related to the integrase core domain with a partly conserved active site architecture. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22007"
] | [
"DUF6930"
] | [
779
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Eukaryota",
"Methanobacteriota",
"ecological metagenomes"
] | [
761,
6,
3,
9
] | 4 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6930 | Domain of unknown function DUF6930 | DUF6930 | 7 |
IPR054217 | 54,217 | Domain of unknown function DUF6937 | DUF6937 | Domain | 217 | false | false | This domain is found N-terminal in a family of uncharacterised proteins. This domain has a significant sequence similarity to the N-terminal domains of a number of proteins members of UDP-Glycosyltransferase/glycogen phosphorylase superfamily. It is predicted to adopt the same α/β structure. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22052"
] | [
"DUF6937"
] | [
217
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Eukaryota",
"marine sediment metagenome"
] | [
150,
66,
1
] | 3 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6937 | Domain of unknown function DUF6937 | DUF6937 | 8 |
IPR054218 | 54,218 | Domain of unknown function DUF6938 | DUF6938 | Domain | 395 | false | false | This domain is found C-terminal in a family of uncharacterised proteins mainly from bacteria. This domain has a significant sequence similarity to the C-terminal domains of a number of proteins members of UDP-Glycosyltransferase/glycogen phosphorylase superfamily. It is predicted to adopt the same α/β structure. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22053"
] | [
"DUF6938"
] | [
395
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Candidatus Methanodesulfokora washburnensis",
"Eukaryota",
"marine sediment metagenome"
] | [
310,
1,
80,
4
] | 4 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6938 | Domain of unknown function DUF6938 | DUF6938 | 2 |
IPR054219 | 54,219 | Protein of unknown function DUF6939 | DUF6939 | Family | 296 | false | false | This entry represents a family of proteins with unknown function found mainly in bacteria. They share sequence similarity with the N-terminal part of NADAR domain and are predicted to adopt structure that is globally similar to the structure of E.coli protein YbiA, a member of the NADAR domain family. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22075"
] | [
"DUF6939"
] | [
296
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Caudoviricetes",
"Eukaryota",
"metagenomes"
] | [
260,
14,
17,
5
] | 4 | [] | [] | 0 | true | Family | Protein of unknown function DUF6939 | Protein of unknown function DUF6939 | DUF6939 | 2 |
IPR054220 | 54,220 | Protein of unknown function DUF6940 | DUF6940 | Family | 291 | false | false | This is a family of uncharacterised proteins found in bacteria and eukaryotes. These proteins are probably distantly related to HIT-containing uridylyltransferases and are likely to adopt the same structure. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22086"
] | [
"DUF6940"
] | [
291
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Eukaryota",
"Megaviricetes",
"metagenomes"
] | [
102,
175,
7,
7
] | 4 | [] | [] | 0 | true | Family | Protein of unknown function DUF6940 | Protein of unknown function DUF6940 | DUF6940 | 7 |
IPR054221 | 54,221 | Protein of unknown function DUF6941 | DUF6941 | Family | 884 | false | false | This is a family of uncharacterised bacterial proteins. They share sequence similarity to Ig-like domains found in a number of proteins such as xylosyltransferase, alkylpurine DNA glycosylase, cycloisomaltooligosaccharide glucanotransferase and are predicted to adopt the same structure. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22091"
] | [
"DUF6941"
] | [
884
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Caudoviricetes",
"metagenomes"
] | [
808,
9,
67
] | 3 | [] | [] | 0 | true | Family | Protein of unknown function DUF6941 | Protein of unknown function DUF6941 | DUF6941 | 1 |
IPR054222 | 54,222 | Protein of unknown function DUF6942 | DUF6942 | Family | 456 | false | false | This is a family of uncharacterised bacterial proteins. They are probably distantly related to uracil-DNA glycosylases and other related DNA glycosylases given their predicted structure. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22098"
] | [
"DUF6942"
] | [
456
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"ecological metagenomes"
] | [
453,
3
] | 2 | [] | [] | 0 | true | Family | Protein of unknown function DUF6942 | Protein of unknown function DUF6942 | DUF6942 | 4 |
IPR054223 | 54,223 | Protein of unknown function DUF6943 | DUF6943 | Family | 397 | false | false | This is a family of uncharacterised bacterial proteins. They share significant sequence similarity with each of the specificity subunit target recognition domains of type I restriction-modification enzymes and are predicted to adopt the same structure. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22105"
] | [
"DUF6943"
] | [
397
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"bioreactor metagenome"
] | [
395,
2
] | 2 | [] | [] | 0 | true | Family | Protein of unknown function DUF6943 | Protein of unknown function DUF6943 | DUF6943 | 7 |
IPR054224 | 54,224 | Protein of unknown function DUF6944 | DUF6944 | Family | 733 | false | false | This is a family of uncharacterised proteins found mainly in Gram-positive bacteria. They are predicted to be associated with the membrane and to adopt structure that has topological similarity to the common structural core of Succinate-acetate permease (SatP) superfamily proteins. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22116"
] | [
"DUF6944"
] | [
733
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Eukaryota"
] | [
707,
26
] | 2 | [] | [] | 0 | true | Family | Protein of unknown function DUF6944 | Protein of unknown function DUF6944 | DUF6944 | 2 |
IPR054225 | 54,225 | Domain of unknown function DUF6947 | DUF6947 | Domain | 15 | false | false | This is a domain found in a group of uncharacterised bacterial sequences whose function is unknown. This domain adopts a galactose-binding-like structure ( ). | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22239"
] | [
"DUF6947"
] | [
15
] | 1 | [] | [] | [] | 0 | [
"4lr4"
] | 1 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Clostridia",
"human gut metagenome"
] | [
13,
2
] | 2 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6947 | Domain of unknown function DUF6947 | DUF6947 | 8 |
IPR054226 | 54,226 | Domain of unknown function DUF6948 | DUF6948 | Domain | 103 | false | false | This domain is found either as standalone or in combination with other domains in a group of uncharacterised proteins. It is distantly related to EDC3 mRNA-decapping protein 3 and it could be involved in RNA-binding. It is predicted to adopt a barrel-like structure with a typical Sm-like fold. The pair of glycines resp... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22253"
] | [
"DUF6948"
] | [
103
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Caudoviricetes",
"Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1)",
"metagenomes"
] | [
69,
27,
1,
6
] | 4 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6948 | Domain of unknown function DUF6948 | DUF6948 | 7 |
IPR054227 | 54,227 | Protein of unknown function DUF6951 | DUF6951 | Family | 355 | false | false | This is a family of uncharacterised proteins found in archaea and bacteria. These proteins are predicted to adopt similar structure to the members of SufE/NifU superfamily. They contain three invariant cysteine residues and a fourth semi-conserved residue either cysteine or histidine. These residues are likely to defin... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22263"
] | [
"DUF6951"
] | [
355
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Archaea",
"Bacteria",
"ecological metagenomes"
] | [
192,
151,
12
] | 3 | [] | [] | 0 | true | Family | Protein of unknown function DUF6951 | Protein of unknown function DUF6951 | DUF6951 | 4 |
IPR054229 | 54,229 | Protein of unknown function DUF6954 | DUF6954 | Family | 89 | false | false | This is a family of uncharacterised proteins from Firmicutes. They are enriched in hydrophobic residues and are likely associated with the membrane. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22268"
] | [
"DUF6954"
] | [
89
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacillota",
"bioreactor metagenome"
] | [
88,
1
] | 2 | [] | [] | 0 | true | Family | Protein of unknown function DUF6954 | Protein of unknown function DUF6954 | DUF6954 | 9 |
IPR054230 | 54,230 | Protein of unknown function DUF6955 | DUF6955 | Family | 183 | false | false | This is a family of small uncharacterised proteins found in bacteria and archaea. They are predicted to adopt an α/β globular structure consisting of a cradle-like β-sheet and α-helices packed on the convex side of the sheet. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22271"
] | [
"DUF6955"
] | [
183
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Archaea",
"Bacteria",
"marine sediment metagenome"
] | [
56,
122,
5
] | 3 | [] | [] | 0 | true | Family | Protein of unknown function DUF6955 | Protein of unknown function DUF6955 | DUF6955 | 9 |
IPR054231 | 54,231 | Domain of unknown function DUF6956 | DUF6956 | Domain | 628 | false | false | This domain is found in uncharacterised bacterial proteins either as standalone or in combination with other domains. It is predicted to adopt an α/β structure with ferredoxin-like topology. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22273"
] | [
"DUF6956"
] | [
628
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Pseudomonadati",
"Siphoviridae sp. ctBLh2",
"metagenomes"
] | [
620,
1,
7
] | 3 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6956 | Domain of unknown function DUF6956 | DUF6956 | 1 |
IPR054232 | 54,232 | Domain of unknown function DUF6957 | DUF6957 | Domain | 511 | false | false | This domain is found in uncharacterised bacterial proteins. It is predicted to fold into a β-barrel that has some similarity to the replication focus targeting sequence (RFTS) domain of Dnmt1 methyltransferase 1. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22275"
] | [
"DUF6957"
] | [
511
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Caudoviricetes",
"Gammaproteobacteria",
"Rhabditidae",
"ecological metagenomes"
] | [
3,
502,
3,
3
] | 4 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6957 | Domain of unknown function DUF6957 | DUF6957 | 4 |
IPR054233 | 54,233 | Protein of unknown function DUF6958 | DUF6958 | Family | 412 | false | false | This family is found in uncharacterised bacterial proteins. They share sequence similarity with several HTH winged helix domains, one of which is the Zinc uptake regulation protein FurB. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22278"
] | [
"DUF6958"
] | [
412
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Eukaryota",
"ecological metagenomes"
] | [
401,
7,
4
] | 3 | [] | [] | 0 | true | Family | Protein of unknown function DUF6958 | Protein of unknown function DUF6958 | DUF6958 | 8 |
IPR054234 | 54,234 | Protein of unknown function DUF6961 | DUF6961 | Family | 208 | false | false | This is a family of small, about 60 residues in length, proteins found mainly in alphaproteobacteria. They are predicted to adopt a globular structure consisting of three helices. The N- and C-terminal helices contain highly conserved aromatic residues in addition to the nearly invariant glycines located at the interhe... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22284"
] | [
"DUF6961"
] | [
208
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Alphaproteobacteria"
] | [
208
] | 1 | [] | [] | 0 | true | Family | Protein of unknown function DUF6961 | Protein of unknown function DUF6961 | DUF6961 | 7 |
IPR054235 | 54,235 | Protein of unknown function DUF6962 | DUF6962 | Family | 496 | false | false | This is a family of uncharacterised proteins. They are related to HlyIII family and are predicted to adopt the same structure consisting of seven transmembrane helices. Their predicted structure, suggests that, similarly to HlyIII, they may contain a Zn-binding site, albeit slightly rearranged as only two of the Zn-coo... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22285"
] | [
"DUF6962"
] | [
496
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Candidatus Lokiarchaeum ossiferum",
"Eukaryota",
"ecological metagenomes"
] | [
401,
2,
81,
12
] | 4 | [] | [] | 0 | true | Family | Protein of unknown function DUF6962 | Protein of unknown function DUF6962 | DUF6962 | 2 |
IPR054237 | 54,237 | Domain of unknown function DUF6964 | DUF6964 | Domain | 18 | false | false | This short helical domain is found in a small set of ribosomal S1 proteins from Rhodothermales species. It's function is unknown. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22291"
] | [
"DUF6964"
] | [
18
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Rhodothermales"
] | [
18
] | 1 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6964 | Domain of unknown function DUF6964 | DUF6964 | 1 |
IPR054238 | 54,238 | Domain of unknown function DUF6965 | DUF6965 | Domain | 620 | false | false | This entry represents a domain found in a group of uncharacterised proteins which are predicted to form a small three helical bundle containing a β-hairpin between helices 1 and 2. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22292"
] | [
"DUF6965"
] | [
620
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Caudoviricetes",
"metagenomes"
] | [
600,
14,
6
] | 3 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6965 | Domain of unknown function DUF6965 | DUF6965 | 2 |
IPR054239 | 54,239 | Domain of unknown function DUF6966 | DUF6966 | Domain | 428 | false | false | This is a domain found in uncharacterised bacterial proteins that is predicted to be helical. It contains a nearly invariant tryptophan towards the N-terminal and a highly conserved motif [F/Y]GGMGSx(2)D towards the C-terminal. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22294"
] | [
"DUF6966"
] | [
428
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"hydrothermal vent metagenome"
] | [
427,
1
] | 2 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6966 | Domain of unknown function DUF6966 | DUF6966 | 6 |
IPR054240 | 54,240 | Protein of unknown function DUF6967 | DUF6967 | Family | 78 | false | false | This family of proteins is found in proteobacteria. Proteins in this family are approximately 70 amino acids in length. They are predicted to fold into a four-stranded β-sheet meander and an α-helix. One face of this β-sheet is enriched with conserved positively charged arginine and lysine residues. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22295"
] | [
"DUF6967"
] | [
78
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"metagenomes"
] | [
69,
9
] | 2 | [] | [] | 0 | true | Family | Protein of unknown function DUF6967 | Protein of unknown function DUF6967 | DUF6967 | 9 |
IPR054241 | 54,241 | Domain of unknown function DUF6968 | DUF6968 | Domain | 634 | false | false | This domain is found in uncharacterised bacterial proteins either standalone or C-terminal to HTH winged helix domains. It has a partial sequence similarity to ribosome associated factors that are members of . | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22302"
] | [
"DUF6968"
] | [
634
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"ecological metagenomes"
] | [
632,
2
] | 2 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6968 | Domain of unknown function DUF6968 | DUF6968 | 5 |
IPR054242 | 54,242 | Domain of unknown function DUF6969 | DUF6969 | Domain | 477 | false | false | This domain is found in uncharacterised proteins mainly from Proteobacteria. It is predicted to adopt an α/β globular structure. It has three highly conserved histidines that are predicted to cluster together in space and are likely involved in metal coordination. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22308"
] | [
"DUF6969"
] | [
477
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Effrenium voratum",
"ecological metagenomes"
] | [
467,
1,
9
] | 3 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6969 | Domain of unknown function DUF6969 | DUF6969 | 2 |
IPR054243 | 54,243 | Domain of unknown function DUF6970 | DUF6970 | Domain | 346 | false | false | This domain is found in uncharacterised proteins from bacteria and protostome animals. It is predicted to fold into a curved meander β-sheet. It contains four highly conserved cysteine residues, two of which are predicted to cluster together in space and are likely to be involved in disulfide bond formation. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22311"
] | [
"DUF6970"
] | [
346
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Bdelloidea",
"ecological metagenomes"
] | [
313,
30,
3
] | 3 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6970 | Domain of unknown function DUF6970 | DUF6970 | 9 |
IPR054244 | 54,244 | Domain of unknown function DUF6971 | DUF6971 | Domain | 44 | false | false | This is a domain of unknown function found at the N-terminal end of uncharacterised proteins from Gammaproteobacteria. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22318"
] | [
"DUF6971"
] | [
44
] | 1 | [] | [] | [] | 0 | [
"5eur"
] | 1 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Gammaproteobacteria"
] | [
44
] | 1 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6971 | Domain of unknown function DUF6971 | DUF6971 | 3 |
IPR054245 | 54,245 | Domain of unknown function DUF6972 | DUF6972 | Domain | 103 | false | false | This domain is found in uncharacterised cyanobacterial proteins either standalone or in combination with other domains. It is probably distantly related to the C-terminal domain of CdiA toxin (CdiA-CT), known member of RNase A superfamily. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22319"
] | [
"DUF6972"
] | [
103
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria"
] | [
103
] | 1 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6972 | Domain of unknown function DUF6972 | DUF6972 | 2 |
IPR054246 | 54,246 | Domain of unknown function DUF6973 | DUF6973 | Domain | 1,641 | false | false | This domain is found in uncharacterised bacterial proteins including the Putative protein RhsE . It is predicted to adopt a globular structure consisting of five α-helices. It is probably distantly related to Wnt domains. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22322"
] | [
"DUF6973"
] | [
1641
] | 1 | [] | [] | [] | 0 | [
"9uu0"
] | 1 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Archaea",
"Bacteria",
"Eukaryota",
"metagenomes",
"uncultured Caudovirales phage"
] | [
2,
1542,
83,
9,
5
] | 5 | [
"Escherichia coli (strain K12)"
] | [
1
] | 1 | true | Domain | Domain of unknown function DUF6973 | Domain of unknown function DUF6973 | DUF6973 | 5 |
IPR054248 | 54,248 | Protein of unknown function DUF6975 | DUF6975 | Family | 280 | false | false | This family of uncharacterised proteins is found in Alphaproteobacteria. It shares significant sequence similarity with enzymes, members of Heme oxygenase-like superfamily and are predicted to adopt similar structure consisting of a bundle of six α-helices. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22391"
] | [
"DUF6975"
] | [
280
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Alphaproteobacteria",
"hydrothermal vent metagenome"
] | [
279,
1
] | 2 | [] | [] | 0 | true | Family | Protein of unknown function DUF6975 | Protein of unknown function DUF6975 | DUF6975 | 2 |
IPR054249 | 54,249 | Protein of unknown function DUF6976 | DUF6976 | Family | 252 | false | false | This family of uncharacterised proteins is found mostly in Proteobacteria. It is likely to consists of two domains that engage in extensive contacts mainly via hydrophobic residues. The predicted structure of the N-terminal domain has similarity to chorismatases. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22396"
] | [
"DUF6976"
] | [
252
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Eukaryota",
"bioreactor metagenome"
] | [
247,
4,
1
] | 3 | [] | [] | 0 | true | Family | Protein of unknown function DUF6976 | Protein of unknown function DUF6976 | DUF6976 | 6 |
IPR054250 | 54,250 | Domain of unknown function DUF6981 | DUF6981 | Domain | 5 | false | false | This entry represents an alpha-lytic protease prodomain-like domain present in a protein of unknown function from Desulfovibrio piger. Its structure has been characterised . | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22403"
] | [
"DUF6981"
] | [
5
] | 1 | [] | [] | [] | 0 | [
"4hlb"
] | 1 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria"
] | [
5
] | 1 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6981 | Domain of unknown function DUF6981 | DUF6981 | 5 |
IPR054251 | 54,251 | Protein of unknown function DUF6982 | DUF6982 | Family | 195 | false | false | This family of proteins is found in bacteria. Proteins in this family are typically between 135 and 1024 amino acids in length. This family of proteins are structurally related to a family of transcriptional repressors of phase-1 flagellin genes. The family appears to contain two related subdomains with SH3-like fold. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22478"
] | [
"DUF6982"
] | [
195
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"ecological metagenomes"
] | [
181,
14
] | 2 | [] | [] | 0 | true | Family | Protein of unknown function DUF6982 | Protein of unknown function DUF6982 | DUF6982 | 1 |
IPR054252 | 54,252 | Cyanophage baseplate Pam3 plug gp18 | Pam3_gp18 | Domain | 2,578 | false | false | This family, previously known as DUF6983, represents Cyanophage baseplate Pam3 plug gp18 and related proteins. Gp18 has structural similarity to a component of the baseplate Complex for Myoviridae Phage XM1. The cyanophage Pam3 has a substantially simpler molecular organisation than the prototypical, contractile-tail b... | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22479"
] | [
"Pam3_gp18"
] | [
2578
] | 1 | [] | [] | [] | 0 | [
"7yfz",
"8env",
"8eon",
"9b45",
"9cuy",
"9mjn"
] | 6 | [
"PUB00154413"
] | [
"36656854"
] | [
"Fine structure and assembly pattern of a minimal myophage Pam3."
] | [
2023
] | 1 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Halobacteriales",
"Linnemannia gamsii",
"Viruses",
"metagenomes"
] | [
1853,
5,
2,
696,
22
] | 5 | [] | [] | 0 | true | Domain | Cyanophage baseplate Pam3 plug gp18 | Cyanophage baseplate Pam3 plug gp18 | Pam3_gp18 | 3 |
IPR054253 | 54,253 | Domain of unknown function DUF6984 | DUF6984 | Domain | 351 | false | false | This entry represents a bacterial family of unknown function. They are predicted to adopt a globular α/β structure. | [] | [] | [] | 0 | [
"PFAM"
] | [
"PF22480"
] | [
"DUF6984"
] | [
351
] | 1 | [] | [] | [] | 0 | [] | 0 | [] | [] | [] | [] | 0 | [] | [] | 0 | 0 | null | [
"Bacteria",
"Knufia peltigerae",
"bioreactor metagenome"
] | [
349,
1,
1
] | 3 | [] | [] | 0 | true | Domain | Domain of unknown function DUF6984 | Domain of unknown function DUF6984 | DUF6984 | 5 |
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