sha256 stringlengths 64 64 | language stringclasses 28
values | size int32 1 491k | lines int32 1 23.2k | content stringlengths 1 200k |
|---|---|---|---|---|
9cc3c40690f26d8cbc6cc49beea2f0a69c9115ee1fa6a9d78ed1cd4f06127290 | CUDA | 8,600 | 282 | // @file nnpooling.cu
// @brief Pooling block
// @author Andrea Vedaldi
/*
Copyright (C) 2014-17 Andrea Vedaldi and Karel Lenc.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#include "nnpooling.hpp"
#include "impl/disp... |
61a6b7fc8de973e688bfed8405b0d63ee5ef46a56f402765149d5662be24f4ea | CUDA | 8,746 | 235 | // @file nnbias_cudnn.cu
// @brief biasolution block CuDNN-based implementation.
// @author Andrea Vedaldi
/*
Copyright (C) 2015-17 Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#include "nnbias.hpp"
#i... |
0711727b56fe6a8e60325f4e961177990676e80eba87dad2aa9dca0a3dd17289 | CUDA | 8,765 | 236 | // @file nnpooling_cudnn.cu
// @brief Pooling layer CuDNN.
// @author Andrea Vedaldi
/*
Copyright (C) 2015-17 Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#include "nnpooling.hpp"
#include "datacu.hpp"... |
9a7c3eb4ebc59b957f72859dcfe34db2611be5b3257734bac6862faabac513eb | CUDA | 8,773 | 209 | #include "../../gpu_utils/gpu_utils.h"
#include "../../monodomain/constants.h"
#include <stddef.h>
#include <assert.h>
#include <stdlib.h>
#include <math.h>
#include "minimal_model.h"
#include <stdio.h>
extern "C" SET_ODE_INITIAL_CONDITIONS_GPU(set_model_initial_conditions_gpu) {
log_info("Using Minimal Model Mix... |
d164ce6bd094e5a3455b4dde27a0ca0370f30ffdae5375829dbee4dc27d632c7 | CUDA | 8,988 | 303 | // @file nnconv.cu
// @brief Convolution block
// @author Andrea Vedaldi
// @author Max Jaderberg
/*
Copyright (C) 2014 Andrea Vedaldi and Max Jaderberg
Copyright (C) 2015-16 Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the... |
d9465fdb4d772b80abec981701356604ce67dd0cc478a7440100d1d5ac444976 | CUDA | 9,009 | 302 | // @file vl_nnbnorm.cu
// @brief Batch normalization MEX wrapper
// @author Sebastien Ehrhardt
// @author Andrea Vedaldi
/*
Copyright (C) 2015 Sebastien Ehrhardt and Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING f... |
317229dc7c828dc9fd34f333a64bc46591113d79e888ae15e23d598f578158b7 | CUDA | 9,011 | 179 | /*
* This file is part of NAStJA.
*
* Copyright 2016 - 2021 Marco Berghoff and the NAStJA Core Developers
*
* This Source Code Form is subject to the terms of the Mozilla Public License, v. 2.0. If a copy of the MPL was not
* distributed with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
*/
#inc... |
e6285822ddcf90cb87d71ce13a92f05679698924c1320318e0d77e577204b9db | CUDA | 9,036 | 236 | /*
This file is part of WhiskEras 2.0.
WhiskEras 2.0 is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
WhiskEras 2.0 ... |
a86eb08f19b102928b1ddda0bcfd44f7a11d68cf04a77895b113b098f4ff2856 | CUDA | 9,075 | 193 | if (layer == 0)
{
sv(0) = -86.98548236471670236369; // membrane_v
sv(1) = 8.794382251905570768710; // ions_na_junc
sv(2) = 8.793353652846489509900; // ions_na_sl
sv(3) = 8.793536430319569774380; // ions_na_i
sv(4) = 134.38543516665100696628; // ions_k_i
sv(5) = 0.000114443087435669990; // ions_ca_junc
sv(6... |
ae5feac7a926cdf4e9e9ba00ca8e6157af5093a8ac55282650527142e5394bc8 | CUDA | 9,139 | 253 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2014 Benoit Steiner <benoit.steiner.goog@gmail.com>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file,... |
51149ac4c84de77c81cc67088d1def3c1cc61c06dc171bb474b296dc534a8923 | CUDA | 9,195 | 315 | // @file vl_nnpool.cu
// @brief Pooling block MEX wrapper
// @author Andrea Vedaldi
// @author Karel Lenc
/*
Copyright (C) 2014-15 Andrea Vedaldi and Karel Lenc.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#include "... |
5ade8f3517bc8aceafd14bde01f4a306e744affc71f8deb6d38f7a5ca6ee25d8 | CUDA | 9,241 | 243 | // @file nnpooling_blas.cu
// @brief Pooling block CuDNN-based implementation.
// @author Andrea Vedaldi
/*
Copyright (C) 2015-16 Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#if !defined(ENABLE_G... |
2abff2b7fd095feecbfca3f9b87b425c5d291a483d31a1c63ba6245e002a7153 | CUDA | 9,463 | 424 | //
// CUDA implementation of FIM (Fast Iterative Method) for Eikonal equations
//
// Copyright (c) Won-Ki Jeong (wkjeong@unist.ac.kr)
//
// 2016. 2. 4
//
#include "cuda_fim_kernel.h"
__device__ real get_time_eikonal(real a, real b, real c, real s)
{
real ret, tmp;
// a > b > c
if(a < b) { tmp = a; a = b; b = tmp;... |
9edd0265c9d488a4da5eb8352e053bc5e930869f46ae0f20aed6dac7acf27803 | CUDA | 9,548 | 319 | // @file vl_nnpool.cu
// @brief Pooling block MEX wrapper
// @author Andrea Vedaldi
// @author Karel Lenc
/*
Copyright (C) 2014-15 Andrea Vedaldi and Karel Lenc.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#include "... |
1f8b742b49264a03d1d6dc9c226d616376033cb41678ae4390e0f94f1fa21b5f | CUDA | 9,861 | 316 | // @file vl_nnbnorm.cu
// @brief Batch normalization MEX wrapper
// @author Sebastien Ehrhardt
// @author Andrea Vedaldi
/*
Copyright (C) 2015 Sebastien Ehrhardt and Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING f... |
267a910859cbf563f59ecd039c1eddc684ae3017b0647385c08dcd3f3458a060 | CUDA | 10,022 | 234 | #include <arbor/fvm_types.hpp>
#include <arbor/gpu/gpu_api.hpp>
#include <arbor/gpu/gpu_common.hpp>
#include "matrix_common.hpp"
#include "diffusion.hpp"
namespace arb {
namespace gpu {
namespace kernels {
/// GPU implementation of Hines matrix assembly.
/// Fine layout.
/// For a given time step size dt:
/// - u... |
ef1928dd66a56435d6d23daed0a7854634d886bc4914ced0d2a2da44f733ae90 | CUDA | 10,110 | 235 | #include <torch/extension.h>
#include <ATen/cuda/CUDAContext.h>
#include <ATen/SparseTensorUtils.h>
#include <ATen/ParallelOpenMP.h>
#include <tuple>
#include <iostream>
namespace at {
using namespace at::sparse;
// tuned on ctd chemical-gene, disease-gene
const int kWarpWorkload = 64;
__global__ void divide_spars... |
1be1ff3ba653428380d90cc18c04971599a377552a434a18165c61b9c9cd3429 | CUDA | 10,224 | 204 | #include "ToRORd_fkatp_endo.h"
#include <stddef.h>
#include <stdint.h>
__global__ void kernel_set_model_initial_conditions(real *sv, int num_volumes, size_t pitch, bool use_adpt_dt, real min_dt) {
int threadID = blockDim.x * blockIdx.x + threadIdx.x;
if(threadID < num_volumes) {
*((real *)((char *)sv... |
24eec629257ce4a0450b656b48b062a95887132ce3a4a55fa4f92c0ee0d8592c | CUDA | 10,259 | 386 | // @file datacu.cu
// @brief Basic data structures (CUDA support)
// @author Andrea Vedaldi
/*
Copyright (C) 2015-16 Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#ifndef ENABLE_GPU
#error "datacu.cu ca... |
6b7cdda5800505dfc4dfb6280d35fb3f1e92f176e2127932ed7cab4925df1b4d | CUDA | 10,550 | 225 | /*!
* Copyright (c) 2021-2026 Microsoft Corporation. All rights reserved.
* Copyright (c) 2021-2026 The LightGBM developers. All rights reserved.
* Licensed under the MIT License. See LICENSE file in the project root for
* license information.
* Modifications Copyright(C) 2023 Advanced Micro Devices, Inc. All righ... |
4812e0ae325e9752219901af1c0f2ad95265e1d81bc90bebec10c75a516119a2 | CUDA | 10,617 | 263 | #include <arbor/fvm_types.hpp>
#include <arbor/gpu/gpu_api.hpp>
#include <arbor/gpu/gpu_common.hpp>
#include "matrix_common.hpp"
#include "matrix_fine.hpp"
namespace arb {
namespace gpu {
namespace kernels {
/// GPU implementation of Hines matrix assembly.
/// Fine layout.
/// For a given time step size dt:
/// ... |
ec9f475b09deaa74f81cf15c6e44bf5cb522662c46d0d0068f2f26be6b8c2a0f | CUDA | 10,723 | 262 | /*****************************************************************************
*
* GPU memory allocation, initialization, and transfer (Host <--> GPU)
*
****************************************************************************/
/*
* This file is part of GPUMCML.
*
* GPUMCML is free software: you can redistribu... |
8b44a99168abf5b2c450fa8f7d3f1de63cf230ecfc04586995d8ed74b23d827b | CUDA | 11,144 | 330 | #include "ATen/ATen.h"
#include "ATen/AccumulateType.h"
#include "ATen/cuda/CUDAContext.h"
#include <THC/THCDeviceUtils.cuh>
#include <cuda.h>
#include <cuda_runtime.h>
#include <cuda_bf16.h>
#include "type_shim.h"
namespace {
// This is the un-specialized struct. Note that we prevent instantiation of this
// struc... |
0e34c391887e469eb4d1a065a12366a711ebcd0c46236d24be73dbb362b8e4d4 | CUDA | 11,536 | 374 | // @file nnnormalizelp.cu
// @brief Batch normalization block
// @author Andrea Vedaldi
/*
Copyright (C) 2017 Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#include "nnnormalizelp.hpp"
#include "impl/di... |
b5a4daf3dce51847577d2f2c40103f3bef02037b4b1f2e5cc8c1fb85ab78c17c | CUDA | 11,610 | 191 | #include "../../gpu_utils/gpu_utils.h"
#include "luo_rudy_1991.h"
#include <stddef.h>
#include <stdint.h>
extern "C" SET_ODE_INITIAL_CONDITIONS_GPU(set_model_initial_conditions_gpu) {
log_info("Using luo_rudy_1991 GPU model\n");
uint32_t num_volumes = solver->original_num_cells;
// execution configurati... |
009531b9d3a73da007aa9e0faf8793f7a106c8ffbd7c29edd1a65cea5e402662 | CUDA | 11,632 | 301 | // @file nnbilinearsampler_cudnn.cu
// @brief BilinearSampler CuDNN-based implementation.
// @author Ankush Gupta, Andrea Vedaldi
/*
Copyright (C) 2016-17 Ankush Gupta and Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COP... |
48aee523a2ea6633da0330ee2ff9474b074b0d97ca252a1f30b7100372dea07c | CUDA | 11,732 | 178 | /*
* This file is part of NAStJA.
*
* Copyright 2016 - 2021 Marco Berghoff and the NAStJA Core Developers
*
* This Source Code Form is subject to the terms of the Mozilla Public License, v. 2.0. If a copy of the MPL was not
* distributed with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
*/
#inc... |
01148a652fce02ac99ca85204d7c796fab36224e2c6bd34cbe3068a2c7713641 | CUDA | 11,836 | 395 | // @file nnnormalizelp_gpu.cu
// @brief Batch normalization block
// @author Andrea Vedaldi
/*
Copyright (C) 2017 Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#include "nnnormalizelp.hpp"
#include "dat... |
e7ca290253c827f61cde8cc2d9ac3f65cca6558db876cb2f4e2a655470b7f9f9 | CUDA | 12,047 | 151 | #include "Maleckar2009.h"
#include <stddef.h>
#include <stdint.h>
#define sv(i) *((real *)((char *)sv + pitch * (i)) + thread_id)
__global__ void kernel_set_model_initial_conditions(real *sv, int num_volumes, size_t pitch, bool use_adpt_dt, real min_dt) {
int thread_id = blockDim.x * blockIdx.x + threadIdx.x;
... |
b920ca3b8341cc84c4fab61c266da5fa210f71fe7f47d70b8d31b7b4d962cbde | CUDA | 12,061 | 369 | // @file bilinearsampler_gpu.cu
// @brief Bilinear sampler CUDA implementation
// @author Ankush Gupta
// @author Andrea Vedaldi
/*
Copyright (C) 2016- Ankush Gupta and Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYIN... |
c69df796d213d02b9974228c8733dfd87ff8996b210b2ce9010e455113c213ed | CUDA | 12,162 | 305 | // @file nnbilinearsampler_cudnn.cu
// @brief BilinearSampler CuDNN-based implementation.
// @author Ankush Gupta, Andrea Vedaldi
/*
Copyright (C) 2016- Ankush Gupta, Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING ... |
37473041ca3be64290da931ece11e8c0715593c2c941d763fccf93c8bed5d3d8 | CUDA | 12,197 | 367 | // @file bilinearsampler_gpu.cu
// @brief Bilinear sampler CUDA implementation
// @author Ankush Gupta
// @author Andrea Vedaldi
/*
Copyright (C) 2016- Ankush Gupta and Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYIN... |
6c5702f5c17b78c947d67fd12776e71a1ead67a80d9faaf783751b7012d3bf92 | CUDA | 12,538 | 361 | // @file nnroipooling.cu
// @brief ROI pooling block
// @author Hakan Bilen
// @author Abishek Dutta
// @author Andrea Vedaldi
/*
Copyright (C) 2016-17 Hakan Bilen, Abishek Dutta, and Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license ... |
04813e63616330da025dd50c4fabc4bb423b5a88344d37d2c23fe2334f132058 | CUDA | 12,604 | 494 | #ifndef __CUDACC__
# error "A C or C++ compiler has been selected for CUDA"
#endif
/* Version number components: V=Version, R=Revision, P=Patch
Version date components: YYYY=Year, MM=Month, DD=Day */
#if defined(__NVCC__)
# define COMPILER_ID "NVIDIA"
# if defined(_MSC_VER)
# define SIMULATE_ID "MSVC"
# eli... |
8859058b6db9a4a0bb723cea779214f3140470b1d35f30b01786219fcf428662 | CUDA | 12,714 | 415 | // @file nnpooling_gpu.cu
// @brief Pooling block GPU.
// @author Andrea Vedaldi
// @author Karel Lenc
/*
Copyright (C) 2014-17 Andrea Vedaldi and Karel Lenc.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#include "nnp... |
5037d6fb8513559e9eb279861d8529cdd454489181e6fe3f3a49c70df8464a38 | CUDA | 12,814 | 335 | /*
* Copyright 1993-2015 NVIDIA Corporation. All rights reserved.
*
* Please refer to the NVIDIA end user license agreement (EULA) associated
* with this source code for terms and conditions that govern your use of
* this software. Any use, reproduction, disclosure, or distribution of
* this software and related... |
78b3002a5a73f59d84a01502dc2c7c2bc2d04c32ea87afe670dd54c20db0f53f | CUDA | 13,003 | 384 | // @file roipooling_gpu.cu
// @brief Region of interest pooling block implementation (GPU)
// @author Hakan Bilen
// @author Abishek Dutta
// @author Andrea Vedaldi
/*
Copyright (C) 2016 Hakan Bilen, Abishek Dutta, and Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available ... |
4509ea52e98001da6de3015d06745286dbab1a321731831d1c7abea44ffb7eb0 | CUDA | 13,221 | 387 | // @file nnroipooling_gpu.cu
// @brief ROI pooling block (GPU)
// @author Hakan Bilen
// @author Abishek Dutta
// @author Andrea Vedaldi
/*
Copyright (C) 2016-17 Hakan Bilen, Abishek Dutta, and Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BS... |
99410fa590b6e994f97a12e9dde0649c101753d97675983a261eacc85263c094 | CUDA | 13,245 | 417 | // @file nnconvt.cu
// @brief Convolution transpose block MEX wrapper
// @author Andrea Vedaldi
/*
Copyright (C) 2015-16 Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#include "bits/mexutils.h"
#includ... |
81cf30b789324c49bb67d6c7a3d47f10729b9c0f7b6ebe5dab3fc706f9c04187 | CUDA | 13,534 | 482 | // @file datamex.cu
// @brief Basic data structures (MEX support)
// @author Andrea Vedaldi
/*
Copyright (C) 2015-16 Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#include "datamex.hpp"
#if ENABLE_GPU
#... |
6456b17e4085ebb2a7b658bc9f3fc251d1f886796f170b195ee801cee67d476b | CUDA | 13,571 | 423 | // @file nnconvt.cu
// @brief Convolution transpose block MEX wrapper
// @author Andrea Vedaldi
/*
Copyright (C) 2015-16 Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#include "bits/mexutils.h"
#includ... |
78eb7d045574c46fec37aafbe99645228a621f32e6e5b3d6aa1b1ee7c47a9eae | CUDA | 13,597 | 477 | /** @file vl_imreadjpeg.cu
** @brief Load images asynchronously
** @author Andrea Vedaldi
**/
/*
Copyright (C) 2014-16 Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#include "bits/impl/tinythread.h"
... |
34bdd14c5dca2996ea807a07157e9fb9f9ccdcbd8ba0ca704541d9af09bd8ba8 | CUDA | 13,682 | 420 | // @file pooling_gpu.cu
// @brief Pooling block implementation (GPU)
// @author Andrea Vedaldi
// @author Karel Lenc
/*
Copyright (C) 2014-16 Andrea Vedaldi and Karel Lenc.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
... |
164e55e8275a8e6180e5e40868ec62eb1a2eb6b3272cebb2a9035c54cf97630e | CUDA | 13,812 | 284 | /*
This file is part of WhiskEras 2.0.
WhiskEras 2.0 is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
WhiskEras 2.0 ... |
8318ef0f89ed72c793762e3bedbdcc7da48fe03a0d6d42b04d24efa11c7a294b | CUDA | 13,820 | 425 | // @file nnnormalize.cu
// @brief Normalization block
// @author Andrea Vedaldi
/*
Copyright (C) 2014-17 Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#include "nnnormalize.hpp"
#include "impl/dispatche... |
08b378ced013acbf831971ea27e07f0f58bd1d13c68231fac2ec9b907573b60c | CUDA | 13,891 | 396 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2014 Benoit Steiner <benoit.steiner.goog@gmail.com>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file,... |
22ccd347ada88f2fe2da615c931ad4f940a25d494dd99bebd6cca88f9b688a04 | CUDA | 13,945 | 374 | /*****************************************************************************
*
* Main control of MCMLGPU
* =========================================================================
*
****************************************************************************/
/*
* This file is part of GPUMCML.
*
* GPUMCML is... |
cdd773992e004f783a6ec21211390f5928d5d7db4073797884e03f89e68ed8fa | CUDA | 14,145 | 296 | /*!
* Copyright (c) 2021-2026 Microsoft Corporation. All rights reserved.
* Copyright (c) 2021-2026 The LightGBM developers. All rights reserved.
* Licensed under the MIT License. See LICENSE file in the project root for
* license information.
* Modifications Copyright(C) 2023 Advanced Micro Devices, Inc. All righ... |
d4d6355e6782c98ae6b2f694932cd96e1b37d59c00c0fa6ae668a9f00e57e68c | CUDA | 14,540 | 373 | #include "courtemanche_ramirez_nattel_1998.h"
#include <stddef.h>
#include <stdint.h>
__global__ void kernel_set_model_initial_conditions(real *sv, int num_volumes, size_t pitch, bool use_adpt_dt, real min_dt) {
int threadID = blockDim.x * blockIdx.x + threadIdx.x;
if (threadID < num_volumes) {
*((r... |
25f4fcae08c7ee48e8d87ab77a2b98e103cc256ad055106a116a316ba8d0090f | CUDA | 14,573 | 319 | #include <iostream>
#include "ATen/ATen.h"
#include "ATen/AccumulateType.h"
#include "ATen/cuda/CUDAContext.h"
#include <cuda.h>
#include <cuda_runtime.h>
#include <cuda_bf16.h>
#include "util.h"
template <int Dim_, int VecSize_, int BatchesPerBlock_, int WarpsForOneBatchPerBlock_>
struct LNParameters {
static con... |
ad16119efe8ff34ff083cce5b095f3d5b187b8356f5ff6322da496bea8f68559 | CUDA | 14,790 | 637 | // @file data.cu
// @brief Basic data structures
// @author Andrea Vedaldi
/*
Copyright (C) 2015-16 Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#include "data.hpp"
#include <cassert>
#include <cstdlib... |
ff8c49f5875cceefb5531bf426edde502212bf49bb6a37d28b6755d6f345ce3c | CUDA | 14,853 | 638 | // @file data.cu
// @brief Basic data structures
// @author Andrea Vedaldi
/*
Copyright (C) 2015-16 Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#include "data.hpp"
#include <cassert>
#include <cstdlib... |
849ad215e07b91d8f03f3de6bf8a449f1ef1d67ad9120a8a4a6e1f4206dd3bda | CUDA | 15,063 | 526 | #include "ten_tusscher_2004.h"
__constant__ size_t pitch;
extern "C" SET_ODE_INITIAL_CONDITIONS_GPU(set_model_initial_conditions_gpu) {
size_t pitch_h;
uint32_t num_volumes = solver->original_num_cells;
#ifdef ENDO
log_info("Using ten Tusscher 2004 ENDO GPU model\n");
#endif
#ifdef EPI
... |
b2249330233dc225bf278ff52cd200d5b3ab49a078c68854afceed0364f42bcc | CUDA | 15,073 | 522 | #include "../../gpu_utils/gpu_utils.h"
#include <stddef.h>
#include <stdint.h>
#include "ten_tusscher_2004_epi.h"
extern "C" SET_ODE_INITIAL_CONDITIONS_GPU(set_model_initial_conditions_gpu) {
log_info("Using ten Tusscher 2004 epi GPU model\n");
uint32_t num_volumes = solver->original_num_cells;
// exec... |
664801e0d396855e0a8206f74e2b2a4263079060c360d26efb242850767788e1 | CUDA | 15,147 | 278 | #include "../../gpu_utils/gpu_utils.h"
#include <stddef.h>
#include <stdint.h>
#include "difrancesco.h"
extern "C" SET_ODE_INITIAL_CONDITIONS_GPU(set_model_initial_conditions_gpu) {
log_info("Using DiFrancesco & Noble 1985 GPU model\n");
uint32_t num_volumes = solver->original_num_cells;
// execution c... |
813004fcbb677c0e1f47dfc4f948acc9a1531325d4c4f99ec5c366a47e2ab831 | CUDA | 15,262 | 442 | // @file nnbnorm.cu
// @brief Batch normalization block
// @author Sebastien Ehrhardt
// @author Andrea Vedaldi
/*
Copyright (C) 2015-17 Sebastien Ehrhardt and Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING fil... |
f1f9b47995bfac3fd44f282c31365383d9b4daec38ec4ec5564dd38d33a6d8e3 | CUDA | 15,351 | 279 | #include <vector>
#include <iostream>
#include <ATen/ATen.h>
#include <ATen/cuda/CUDAGeneratorImpl.h>
#include <ATen/cuda/detail/IndexUtils.cuh>
#include <ATen/cuda/detail/TensorInfo.cuh>
#include <cuda.h>
#include <cuda_runtime.h>
#include <cuda_fp16.h>
#include <cuda_bf16.h>
#include <cuda_profiler_api.h>
#include <... |
ec9dbe0897ce933ebd01e4d6f7ae419a87815155a070fd93a9aa8b32866f968c | CUDA | 15,972 | 243 | /*
This file is part of WhiskEras 2.0.
WhiskEras 2.0 is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
WhiskEras 2.0 ... |
ab90b8c4cb3d3fffbeba0a4ecad0c05e93f108866b119a57bfb2a6ae094bb53f | CUDA | 16,513 | 503 | // @file nnconv.cu
// @brief Convolution block MEX wrapper
// @author Andrea Vedaldi
// @author Max Jaderberg
/*
Copyright (C) 2014 Andrea Vedaldi and Max Jaderberg
Copyright (C) 2015 Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license... |
b8183be56c5e6d53e223b7d9e851e2add3010fc989b64ef4c2a9092a2b06e3a3 | CUDA | 16,609 | 462 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2015-2016 Gael Guennebaud <gael.guennebaud@inria.fr>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file... |
d06c991a9091cccd499a746637b5ae9b14cfaea460bcf537e09fa1276bfd426c | CUDA | 17,161 | 479 | // @file nnbnorm_cudnn.hpp
// @brief bnorm CuDNN-based implementation.
// @author Andrea Vedaldi
/*
Copyright (C) 2016 Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#include "nnbnorm_cudnn.hpp"
#include... |
f0e3c1cdc3b1201dbc9447f547e6f647389345e813827407199e5377c4ac80bd | CUDA | 17,659 | 522 | // @file nnconv.cu
// @brief Convolution block MEX wrapper
// @author Andrea Vedaldi
// @author Max Jaderberg
/*
Copyright (C) 2014 Andrea Vedaldi and Max Jaderberg
Copyright (C) 2015 Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license... |
54fbe89ed5fc6bc0a8d1411a320aaa6e0d27f10bd0b3c8dedb9f958263ddc2a5 | CUDA | 17,797 | 500 | // @file nnbnorm_cudnn.hpp
// @brief bnorm CuDNN-based implementation.
// @author Andrea Vedaldi
/*
Copyright (C) 2016-17 Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#include "nnbnorm.hpp"
#inclu... |
24f3cc17e9af5eb9f1713b51348ceb07d669fd8ca42b44dc86e7c3fb30b334ca | CUDA | 18,116 | 460 | /*!
* Copyright (c) 2021-2026 Microsoft Corporation. All rights reserved.
* Copyright (c) 2021-2026 The LightGBM developers. All rights reserved.
* Licensed under the MIT License. See LICENSE file in the project root for license information.
*/
#ifdef USE_CUDA
#include <LightGBM/cuda/cuda_tree.hpp>
namespace Li... |
b6da790549948454d980e4e7b15132edbd1ed0c3b210f0f41397c913552a428e | CUDA | 18,428 | 475 | #include "../../gpu_utils/gpu_utils.h"
#include <stddef.h>
#include <stdint.h>
#include "CRN2017_TASK1_IKACh.h"
__constant__ size_t pitch;
__constant__ real abstol;
__constant__ real reltol;
__constant__ real max_dt;
__constant__ real min_dt;
__constant__ uint8_t use_adpt;
size_t pitch_h;
extern "C" SET_ODE_IN... |
741b62751fd9f97550e82970be4ccd652c3a350ea453d9ed16f445e9fcec1220 | CUDA | 18,771 | 509 | // @file nnconv.cu
// @brief Convolution block
// @author Andrea Vedaldi
// @author Max Jaderberg
/*
Copyright (C) 2014 Andrea Vedaldi and Max Jaderberg.
Copyright (C) 2015-17 Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see th... |
9919c8405f7e305f9b1a3e2db6d2c7ad70e5ed50b17e8d0be8a3bfd6fbf10c3d | CUDA | 18,982 | 477 | // Copyright (c) 2026 Rohit Jena. All rights reserved.
//
// This file is part of FireANTs, distributed under the terms of
// the FireANTs License version 1.0. A copy of the license can be found
// in the LICENSE file at the root of this repository.
//
// IMPORTANT: This code is part of FireANTs and its use, reproduct... |
1e18672a4428ceb72d1e2b7813ccdfe88e41e32bc38308bb0e97d284179e9361 | CUDA | 19,742 | 415 | /*!
* Copyright (c) 2021-2026 Microsoft Corporation. All rights reserved.
* Copyright (c) 2021-2026 The LightGBM developers. All rights reserved.
* Licensed under the MIT License. See LICENSE file in the project root for
* license information.
* Modifications Copyright(C) 2023 Advanced Micro Devices, Inc. All righ... |
881b047b6d70faf56ffcba9a0865b6698714f9cd6d523d4a5da22b8132166134 | CUDA | 20,253 | 416 | /*
* This file is part of NAStJA.
*
* Copyright 2016 - 2021 Marco Berghoff and the NAStJA Core Developers
*
* This Source Code Form is subject to the terms of the Mozilla Public License, v. 2.0. If a copy of the MPL was not
* distributed with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
*/
#inc... |
4f5aa6ca063992956d45bc1df40eec0cedbca8d5e7d87e557c639d66e48b0907 | CUDA | 20,315 | 659 | // @file im2row_gpu.cu
// @brief Stack image patches as matrix rows (GPU)
// @author Andrea Vedaldi
/*
Copyright (C) 2014-15 Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#include "im2row.hpp"
#include ... |
8b0d04d3263975572993f4334cf8420753c068f1a1e12fb900c3fea33b7e95c9 | CUDA | 21,179 | 404 | #include <stddef.h>
#include <stdint.h>
#include "ten_tusscher_2006.h"
__constant__ size_t pitch;
extern "C" SET_ODE_INITIAL_CONDITIONS_GPU(set_model_initial_conditions_gpu) {
size_t pitch_h;
log_info("Using ten Tusscher 2006 GPU model\n");
uint32_t num_volumes = solver->original_num_cells;
// ex... |
0b9ae5bb6883a776348345a822f1e7f293776e2c41df9d488adbaa97edc435ee | CUDA | 22,279 | 498 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2016 Benoit Steiner <benoit.steiner.goog@gmail.com>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file,... |
5fca4102d69ed126daa47bd7fc7082de235d597ef78e54d3871d4c34e3e26027 | CUDA | 22,920 | 543 | // @file nnconv_cudnn.cu
// @brief Convolution block CuDNN-based implementation.
// @author Andrea Vedaldi
/*
Copyright (C) 2015-16 Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#if !defined(ENABLE_GPU)... |
3eed737b68e00f6d2576bc0727cb1df6b1c8db1ccc094b707237fdec252f8ff1 | CUDA | 23,116 | 451 | /*!
* Copyright (c) 2021-2026 Microsoft Corporation. All rights reserved.
* Copyright (c) 2021-2026 The LightGBM developers. All rights reserved.
* Licensed under the MIT License. See LICENSE file in the project root for license information.
* Modifications Copyright(C) 2023 Advanced Micro Devices, Inc. All rights ... |
ac2412ea378f9add334cfac28f0073e8d9e7bde5a6258a37bba0ad35cf8eb6b1 | CUDA | 23,674 | 551 | // @file nnconv_cudnn.cu
// @brief Convolution block CuDNN-based implementation.
// @author Andrea Vedaldi
/*
Copyright (C) 2015-16 Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#if !defined(ENABLE_GPU)... |
4bde466d75591ca2ade19da4d0ed9ed51e06ded95999e2b7491102623ea60e08 | CUDA | 24,378 | 482 | /*!
* Copyright (c) 2021-2026 Microsoft Corporation. All rights reserved.
* Copyright (c) 2021-2026 The LightGBM developers. All rights reserved.
* Licensed under the MIT License. See LICENSE file in the project root for
* license information.
*/
#ifdef USE_CUDA
#include "cuda_regression_objective.hpp"
#include ... |
e6b3fdbf39f342684d1f656cdcb987e0315eba887003d35f9218095987f96dce | CUDA | 25,651 | 721 | #include "../../gpu_utils/gpu_utils.h"
#include <stddef.h>
#include <stdint.h>
#include "Ohara_Rudy_2011.h"
__device__ int celltype_gpu = 0;
extern "C" SET_ODE_INITIAL_CONDITIONS_GPU(set_model_initial_conditions_gpu) {
log_info("Using Ohara Rudy 2011 GPU model\n");
uint32_t num_volumes = solver->original_nu... |
2d12eeeb1b9c88eb62df496982a4be8c848db2302271e0798b8c6bb87763dcb4 | CUDA | 25,660 | 553 | // Copyright (c) 2026 Rohit Jena. All rights reserved.
//
// This file is part of FireANTs, distributed under the terms of
// the FireANTs License version 1.0. A copy of the license can be found
// in the LICENSE file at the root of this repository.
//
// IMPORTANT: This code is part of FireANTs and its use, reproduct... |
935f7606ded89613a1c47a6e471fa70953fc5ebf3ebf3630def67166ee5d2ffb | CUDA | 26,344 | 907 | #include "Tworld.h"
#include <stddef.h>
#include <stdint.h>
__constant__ size_t pitch;
__constant__ real abstol;
__constant__ real reltol;
__constant__ real max_dt;
__constant__ real min_dt;
__constant__ uint8_t use_adpt;
size_t pitch_h;
#define sv(i) *((real *)((char *)sv + pitch * (i)) + thread_id)
__global_... |
d04d555a4f2e6fb5043a3b901a5043423ae78b36d230507962f3f29fc4b0b684 | CUDA | 26,516 | 699 | /*****************************************************************************
*
* Kernel code for GPUMCML
* =========================================================================
* Featured Optimizations:
* 1) Shared memory cache for high fluence region
* 2) Reduced divergence
* 3) Optimized atomicAdd
*... |
6acd97557229189b5de8d482b0f9876869d4bdf09c33c7514c8df7c3f062df4f | CUDA | 27,118 | 666 | #include "../../gpu_utils/gpu_utils.h"
#include <stddef.h>
#include <stdint.h>
#include "li_rudy_2011.h"
extern "C" SET_ODE_INITIAL_CONDITIONS_GPU(set_model_initial_conditions_gpu) {
log_info("Using Li & Rudy 2011 GPU model\n");
uint32_t num_volumes = solver->original_num_cells;
// execution configurat... |
7eb8a9d2ab442d0fa801d72fd128feaf491af860e3b032a1071308c2ae84eaaf | CUDA | 27,597 | 928 | #include <stddef.h>
#include <stdint.h>
#include "mixed_tentusscher_myo_epi_2004.h"
__constant__ size_t pitch;
size_t pitch_h;
extern "C" SET_ODE_INITIAL_CONDITIONS_GPU(set_model_initial_conditions_gpu)
{
log_info("Using mixed version of TenTusscher 2004 myocardium + epicardium GPU model\n\n");
uint32_t n... |
2154cd0f4f5a37ba08f73c5801b1ae87f873833a950b0e4458c1dc80476d89a3 | CUDA | 28,438 | 621 | // Copyright (c) 2026 Rohit Jena. All rights reserved.
//
// This file is part of FireANTs, distributed under the terms of
// the FireANTs License version 1.0. A copy of the license can be found
// in the LICENSE file at the root of this repository.
//
// IMPORTANT: This code is part of FireANTs and its use, reproduct... |
e18aab2312e39fd54d68d28f045056563e7b059d8f64435fe160a59d087ef046 | CUDA | 30,134 | 424 | #include "../../gpu_utils/gpu_utils.h"
#include <stddef.h>
#include <stdint.h>
#include "bondarenko_2004.h"
__global__ void kernel_set_model_initial_conditions(real *sv, int num_volumes, size_t pitch, bool use_adpt_dt, real min_dt) {
int threadID = blockDim.x * blockIdx.x + threadIdx.x;
if (threadID < num_vo... |
e959ba4d96649ea804c6289a1bdc696a20ce214e8d27a03b77835f4c238144be | CUDA | 30,726 | 964 | #ifndef __CUDACC__
# error "A C or C++ compiler has been selected for CUDA"
#endif
/* Version number components: V=Version, R=Revision, P=Patch
Version date components: YYYY=Year, MM=Month, DD=Day */
#if defined(__NVCC__)
# define COMPILER_ID "NVIDIA"
# if defined(_MSC_VER)
# define SIMULATE_ID "MSVC"
# eli... |
2641ce837f24a566e8a2b6764be5b1f98305700816323a8fc5d28f9c5f2511a9 | CUDA | 34,324 | 810 | #include "ToRORd_fkatp_mixed_endo_mid_epi_GKsGKrtjca_adjustments.h"
#include <stddef.h>
#include <stdint.h>
__global__ void kernel_set_model_initial_conditions(real *sv, int num_volumes, size_t pitch, bool use_adpt_dt, real min_dt) {
int threadID = blockDim.x * blockIdx.x + threadIdx.x;
if (threadID < num_vol... |
c4d84bd9526c18e99726ecc139e285bfefb5b97c832fc4512e0c62d69b24e4b0 | CUDA | 34,470 | 913 | #include "trovato_2019.h"
#include <stddef.h>
#include <stdint.h>
__global__ void kernel_set_model_initial_conditions(real *sv, int num_volumes, size_t pitch, bool use_adpt_dt, real min_dt) {
int threadID = blockDim.x * blockIdx.x + threadIdx.x;
if (threadID < num_volumes) {
real STATES[NEQ];
... |
497eba54bac6f59707811f011acdccf327b642384cfd9fa7d8dcb09fdf1d3721 | CUDA | 34,713 | 666 | /*!
* Copyright (c) 2021-2026 Microsoft Corporation. All rights reserved.
* Copyright (c) 2021-2026 The LightGBM developers. All rights reserved.
* Licensed under the MIT License. See LICENSE file in the project root for
* license information.
* Modifications Copyright(C) 2023 Advanced Micro Devices, Inc. All righ... |
67131842c0b9ec69604f23ddf2236a00c3449b840d01cc23e0ec680e18f6b99b | CUDA | 36,478 | 860 | #include "ToRORd_Land_mixed_endo_mid_epi.h"
#include <stddef.h>
#include <stdint.h>
__global__ void kernel_set_model_initial_conditions(real *sv, int num_volumes, size_t pitch, bool use_adpt_dt, real min_dt) {
int threadID = blockDim.x * blockIdx.x + threadIdx.x;
if (threadID < num_volumes) {
// Defau... |
7e1a299320191180c150d1d24a723d9ee2c7a7c7dab1d00ec8aedde0c8887672 | CUDA | 42,688 | 1,021 | #include "trovato_2020.h"
#include <stddef.h>
#include <stdint.h>
__global__ void kernel_set_model_initial_conditions(real *sv, int num_volumes, size_t pitch, bool use_adpt_dt, real min_dt) {
int threadID = blockDim.x * blockIdx.x + threadIdx.x;
if (threadID < num_volumes) {
// Default initial condit... |
474851c4928614ca55fcb6d5dad7ca4ba2686fc5ca654bc6d2bc8172abf777c7 | CUDA | 43,358 | 1,188 | // @file nnbnorm_gpu.cu
// @brief Batch normalization block GPU.
// @author Sebastien Ehrhardt
// @author Andrea Vedaldi
/*
Copyright (C) 2015-17 Sebastien Ehrhardt and Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYIN... |
5f1cf91fdffb5ba88fa28d5495e681d4dadea9be268cf77b83e0fe6917589111 | CUDA | 44,052 | 1,474 | /** @file vl_imreadjpeg.cu
** @brief Load and transform images asynchronously
** @author Andrea Vedaldi
**/
/*
Copyright (C) 2014-16 Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#include <assert.h>
... |
1b9ab3fe55af48cd474adf88dba59cb9f8acd7c5dadef83da2777ce550a091ac | CUDA | 44,118 | 1,470 | /** @file vl_imreadjpeg.cu
** @brief Load and transform images asynchronously
** @author Andrea Vedaldi
**/
/*
Copyright (C) 2014-16 Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see the COPYING file).
*/
#include <assert.h>
... |
b6f57f7c1c76809451a72ba4e5c959f75cac1b58d58a99f292f8cd58b600fc0d | CUDA | 44,526 | 1,094 | #include "ToRORd_dynCl_mixed_endo_mid_epi.h"
#include <stddef.h>
#include <stdint.h>
__global__ void kernel_set_model_initial_conditions(real *sv, int num_volumes, size_t pitch, bool use_adpt_dt, real min_dt) {
int threadID = blockDim.x * blockIdx.x + threadIdx.x;
if (threadID < num_volumes) {
for (in... |
ed68c37c1d5ccd20db2e28ed30beb8d3348dc2c6d8c830308c3609fe7655e6b7 | CUDA | 45,573 | 1,215 | // @file bnorm_gpu.cu
// @brief Batch normalization implementation (GPU)
// @author Sebastien Ehrhardt
// @author Andrea Vedaldi
/*
Copyright (C) 2015-16 Sebastien Ehrhardt and Andrea Vedaldi.
All rights reserved.
This file is part of the VLFeat library and is made available under
the terms of the BSD license (see... |
bbeb2db5360257fafd60277648178107377bed0d13f83becd629cfa307755d41 | CUDA | 46,769 | 1,119 | #include "ToRORd_fkatp_mixed_endo_mid_epi.h"
#include <stddef.h>
#include <stdint.h>
__global__ void kernel_set_model_initial_conditions(real *sv, int num_volumes, size_t pitch, bool use_adpt_dt, real min_dt) {
int threadID = blockDim.x * blockIdx.x + threadIdx.x;
// Default initial conditions (endocardium ce... |
cdb3ed5d8406bfe369dd0d2944069427c714a78162b17434275f88f4bc9e0260 | CUDA | 55,931 | 963 | /*!
* Copyright (c) 2021-2026 Microsoft Corporation. All rights reserved.
* Copyright (c) 2021-2026 The LightGBM developers. All rights reserved.
* Licensed under the MIT License. See LICENSE file in the project root for
* license information.
* Modifications Copyright(C) 2023 Advanced Micro Devices, Inc. All righ... |
0fe04af68201567b1c53b8463454c4011727d6bbc448e90a7b06038b41e644a8 | CUDA | 56,284 | 1,169 | /*!
* Copyright (c) 2021-2026 Microsoft Corporation. All rights reserved.
* Copyright (c) 2021-2026 The LightGBM developers. All rights reserved.
* Licensed under the MIT License. See LICENSE file in the project root for
* license information.
* Modifications Copyright(C) 2023 Advanced Micro Devices, Inc. All righ... |
bad512e0f905b8b941e0dd9670c19660901e8c808e7a7e9f39ba0ddd4b18b003 | CUDA | 60,089 | 1,643 | // This file is part of Eigen, a lightweight C++ template library
// for linear algebra.
//
// Copyright (C) 2014 Benoit Steiner <benoit.steiner.goog@gmail.com>
//
// This Source Code Form is subject to the terms of the Mozilla
// Public License v. 2.0. If a copy of the MPL was not distributed
// with this file,... |
4291be3ad775cbae8efa88171a85fff7b58e011e5d575c8dbc65a00a6426f4ce | CUDA | 61,406 | 1,440 | // Copyright (c) 2026 Rohit Jena. All rights reserved.
//
// This file is part of FireANTs, distributed under the terms of
// the FireANTs License version 1.0. A copy of the license can be found
// in the LICENSE file at the root of this repository.
//
// IMPORTANT: This code is part of FireANTs and its use, reproducti... |
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