sha256 stringlengths 64 64 | language stringclasses 28
values | size int32 1 491k | lines int32 1 23.2k | content stringlengths 1 200k |
|---|---|---|---|---|
a51c854f11d267018be634440314903722c28b8f01856dc894a6bdd1c7de0cbc | MATLAB | 501 | 31 | function r = le(p,q)
% this function compares the less than or equal to condition of x, y, and z values of the structures that I use in
% the FVtool.
%
% SYNOPSIS:
%
%
% PARAMETERS:
%
%
% RETURNS:
%
%
% EXAMPLE:
%
% SEE ALSO:
%
% Copyright (c) 2012-2016 Ali Akbar Eftekhari
% See the license file
if (isa(p, 'CellVaria... |
27eef283900aab4384c53a542bcdafeebd0297d55ee3adc7ec88283586cc581b | MATLAB | 502 | 35 | function [llh] = tapas_linear_llh(data, theta, ptheta)
%%
%
% aponteeduardo@gmail.com
% copyright (C) 2016
%
y = data.y;
u = data.u;
theta = theta.y;
[np, nc] = size(theta);
llh = zeros(np, nc);
ln2pi = log(2 * pi);
% Precision
pe = ptheta.pe;
lpe = log(ptheta.pe);
for j = 1:nc;
for i = 1:np
x = ... |
86550640445e3c9df1675c715294a07a8cbe285dfa8f152913fb75139120c865 | MATLAB | 502 | 23 | % performs transformation from geometry of
% recon-code to output of spm_read_vols
%
%
% INPUT
% Y - congruent with FullImReconStackData & imagesc-orientation
%
% OUTPUT
% newY - from spm_read_vols
function newY = tapas_uniqc_transform_matrix_analyze2matlab(Y)
nSlices = size(Y,3);
nVolumes = size(Y,4);
... |
a189678e23884d5bda98dbc03e056399761c3637db79b2cff2a1dcaa889b116d | MATLAB | 502 | 16 | %% Figure 6 S1
YOURDATAPATH = '';
savePath = [YOURDATAPATH '/' 'models' '/'];
%% Load model outputs
load(sprintf('%sall_classifier,target', savePath), 'outputsLR')
load(sprintf('%sall_classifier,targetPartial', savePath), 'outputsPartialLR')
%% PANEL A
% Classifier performance over time for target decoder
plotTargetC... |
d60ae4ca3718580448ddaa4af76f59325f0b386b814fc28751cfc603b948a208 | MATLAB | 502 | 15 | %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% Requires: https://github.com/anders-s-olsen/psilocybin_dynamic_FC
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
clear; clc;
ROI_sig = readmatrix('time_series.txt');
ROI_sig = ROI_sig(:,1:5);
T = {size(ROI_sig,1)}; % one subje... |
832a78308841bb6bdf2279c7313c12a4e68cab7021f604d2b421527674e6de41 | MATLAB | 503 | 20 | function b=brightness(RGBrows)
% given triples of RGB values, returns the overall brightness vector. This
% is performed on each row of the input (RGBrows) independently.
%__________________________________________________________________________
% Copyright (C) 2010 Medical Research Council
import rsa.*
import rsa.fi... |
0338c4348fbfd75a5c193b745e7b077268ce75cca5778ede3b6f94c46b9af0d9 | MATLAB | 504 | 31 | function r = ge(p,q)
% this function compares the greater than or equality condition of x, y, and z values of the structures that I use in
% the FVtool.
%
% SYNOPSIS:
%
%
% PARAMETERS:
%
%
% RETURNS:
%
%
% EXAMPLE:
%
% SEE ALSO:
%
% Copyright (c) 2012-2016 Ali Akbar Eftekhari
% See the license file
if (isa(p, 'CellVa... |
324ba9587eb4f015ff3ba35b2db287c02e35c18a5a559d58688cbde92ac27f50 | MATLAB | 504 | 23 | function RDMs=wrapAndNameRDMs(RDMs,names)
% wraps the RDMs in argument RDMs into a structured array and assigns the
% names in arguments names.
%__________________________________________________________________________
% Copyright (C) 2012 Medical Research Council
import rsa.*
import rsa.fig.*
import rsa.fmri.*
impo... |
2a20e2149994dcc511a4dd96f722e38f7139b767bd81805ddca146af7e36e043 | MATLAB | 505 | 10 | %-----------------------------------------------------------------------
% Job saved on 02-Jul-2014 11:27:33 by cfg_util (rev $Rev$)
% spm SPM - SPM12b (5672)
% cfg_basicio BasicIO - Unknown
%-----------------------------------------------------------------------
matlabbatch{1}.spm.spatial.smooth.data = '<UNDEFINED>';
... |
95287b05b602f8f82ca2fad5e3b3368828c6c4654ee3691597fef456c2eebe3e | MATLAB | 505 | 20 | % Compute the log intensity for the inverse link function g(f) = f^2+a.
% Output range: 0 <= g(f).
%
% The function can be used in GLM likelihoods such as likPoisson, likGamma, and
% likInvGauss.
%
% Copyright (c) by Hannes Nickisch, 2021-02-16.
function [lg,dlg,d2lg,d3lg] = glm_invlink_square(a,f)
f2a = f.*f+a;
l... |
9a9e872234a018f4864f16604684479c5841e8e2d8bb3df6e19fbea36e17e415 | MATLAB | 505 | 19 | function options=setIfUnset(options,field,value)
% if options.(field) is empty or doesn't exist, this function sets options.(field) to value.
%__________________________________________________________________________
% Copyright (C) 2009 Medical Research Council
import rsa.*
import rsa.fig.*
import rsa.fmri.*
import ... |
c0d10159edc17eff24165ccc9ecb0381bf838d1aa0686e5e758991ba93105246 | MATLAB | 505 | 13 | function varargout = ft_read_vol(varargin)
% This function is a backward compatibility wrapper for existing MATLAB scripts
% that call a function that is not part of the FieldTrip toolbox any more.
%
% Please update your code to make it future-proof.
oldname = mfilename;
newname = 'ft_read_headmodel';
ft_warning('%s... |
e03d01f6756f95f6a13267e24e3531530084213c7c70a5f1952aa56ad7435f36 | MATLAB | 505 | 21 | function out_str = extractFromString(inp_str, type)
% extracts string or number from input string
% (c) Jiri, Apr16
if strcmp(type, 'string')
out_str = [];
for c = 1:size(inp_str,2)
if isnan(str2double(inp_str(c)))
out_str = cat(2, out_str, inp_str(c));
end
end
elseif strcm... |
0fdda76b3401f1839c45933e70ba57f4fff905ef2b71826c7255349ea7ec8aff | MATLAB | 506 | 19 | function tapas_BLT_runPause(params)
% tapas_BLT_runPause shows a pause (fication cross)
%
% About:
% Coded by F.Petzschner 19. April 2017
% Last change: F.Petzschner 19. April 2017
% Show fixation cross for pause
Screen('DrawTexture', params.screen.window, params.text.imgiti, [], params.screen.fit, 0);
Screen('Flip'... |
f3221dfc04fc19ce1afd05b3cbf76c38edff85c75908f5dcd22cc033a6260e64 | MATLAB | 507 | 15 | function plot_amp(rez,i)
Spike_id = find(rez.st(:,end)==i);
f=figure;
channel = rez.Merge_cluster{i,5};
Nchan = length(channel);
for k=1:Nchan
amplitudes = rez.best_channel_M(Spike_id,channel(k));
[Ncount,edgesS] = histcounts(amplitudes);
subplot(Nchan,1,k)
... |
1c8674a1c612ce0a8e1cf2ba65a39caac99209ec571b1f0dc4b4b465cdd55ad8 | MATLAB | 508 | 17 | %% stats
% betaVal = [betaEstMotion1, betaEstStatic1,betaEstMotion2, betaEstStatic2,...
% betaEstMotion3, betaEstStatic3,betaEstMotion4, betaEstStatic4,...
% betaEstMotion5, betaEstStatic5,betaEstMotion6, betaEstStatic6, betaEstMotion7, betaEstStatic7];
%% one-sample ttest
clear h
clear p
for iCol=1:size(betaVa... |
4e9e2ea7108b9714ad73b0d9abdcce2b24ac08b2aa32e77d83758936a5d27f57 | MATLAB | 508 | 23 | function [F,p,df1,df2] = compare_rsquare_noprint(r2full,r2red,dfful,dfred)
df1 = dfred - dfful;
df2 = dfful;
num = (r2full - r2red) ./ df1; % percentage increase per df lost
if num < 0, error('Full model error df should be smaller than reduced!');,end
denom = (1 - r2full) ./ df2; % unexplained v... |
5c8d118128a7fdb3bebf09ff71a7b6e6ca75f9ca6f97719892aba64d2e844d82 | MATLAB | 508 | 20 | function vp = getVPvalues(x,th,bw)
if ~exist('th','var')||isempty(th)
th=0.01/2;
end
if ~exist('bw','var')||isempty(bw)
bw=0.25;
end
[xv,yv]=ksdensity(x,'bandwidth',bw);
xv=xv/max(xv)/2;
vp.y=[yv,fliplr(yv)];
vp.x=[xv,-fliplr(xv)];
subMed=median(x);
vp.median... |
7dd502a0f954e753c27cb38d6de1c2a325053f260fb8396367e18f450dfe8ba3 | MATLAB | 508 | 21 | %{
#
-> tune.STAQual
---
x=null : float # x coordinate (mean of Gaussian fit)
y=null : float # y coordinate (mean of Gaussian fit)
radius=null : float # 2*sigma border of major axis of Gaus... |
bfd2c17f24f15cba1ee2526681e0ae4d3819443ed56af80349990627e4228544 | MATLAB | 508 | 12 | %{
vis.MadAlexFrameSet (lookup) # holds training and testing frames for MadAlex stimulus
frame_set_id : tinyint # identifier for the frame set
---
uniques : longblob # integer array with unique image ids
repeats_shared : longblob ... |
c231e8ce92b691c1483317dec143ffb3cc488847b489a5983efd8f4032105ff4 | MATLAB | 508 | 15 | function randSpikeTimes = randomiseSpikeTrain(spikeTimes, duration, method)
if strcmp(method, 'wrap')
minTime = 0;
maxTime = duration;
cutTime = (maxTime-minTime) .* rand(1,1) + minTime;
beforeCutTimeIdx = spikeTimes < cutTime;
afterCutTimeIdx = spikeTimes >= cutTime;
... |
d67738e38cbeed122ed7b4ec4cba5fea76e325796c8fd2ac9f8c3bd72ec9e361 | MATLAB | 508 | 26 | function [E,E_indiv] = multilevel_efficiency(FC,thres_list)
arguments
FC double
thres_list double
end
n = size(FC,1);
FC(1:n+1:end) = nan;
ML_efficiency = nan(n,numel(thres_list));
E_indiv = nan(n,1);
for threshold = 1:numel(thres_list)
d = (1./(distance_bin(FC>thres_list(threshold))));
... |
da6415920f5fdc76f09ba1ae5b382d2bdb664e59d7b886e1eef4781bf76944c6 | MATLAB | 508 | 28 | clear all
session = '/media/data-313/Rat399-20190402/HPC/Rat399-20190402.xml';
SetCurrentSession(session);
dHPC = [25, 26, 30, 39];
vHPC = [22, 29, 31, 34, 35, 37, 38, 42];
s=GetSpikeTimes('all', 'output', 'full')
s(s(:,3)==0|s(:,3)==1,:)=[];
ClusNumb=unique(s(:,3));
Mf=[]
for i = dHPC
g=s(find(s(:,2)==i),:)
... |
04faf9fa3de235fb6ee1642e592c8749e1d8ff13ad97c613c5473cd6421402bf | MATLAB | 509 | 25 | function fd = dicom_open(strFilename)
%
% Gets a file descriptor to a DICOM file and check
% it vaguely for DICOM like properties...
%
fd = fopen(strFilename, 'rb');
if -1 == fd
fprintf('\nFailed to open DICOM file.');
return;
end
% loose the header
hdr = fread(fd, 128, 'uchar');
if strcmp(sprintf('%c', f... |
799ff178eb6aecb6861bd8972c3fdecd977cdca19b7a51582fa8539a1b05aea8 | MATLAB | 509 | 25 | %Data 1 SUSHI
Data11=Data1.*10^3; % Convert Data to uM
Data11=Data11+0.001;
for i=1:length(Data11)
aux=Data11(:,:,i);
aux(Sushi400_400==0)=0;
Data11(:,:,i)=aux;
end
%Data 2 Avrg. Volume
Data12=Data2.*10^3; % Convert Data to uM
Data22=Data12+0.001;
for i=1:length(Data22)
aux2=Data22(:,:,i);
... |
dfe3f18d55489d12f1a56c25ea558f852ee6fc9938301d43d4e8be1a742a0cd5 | MATLAB | 509 | 24 | function vring = compute_vertex_ring(face)
% compute_vertex_ring - compute the 1 ring of each vertex in a triangulation.
%
% vring = compute_vertex_ring(face);
%
% vring{i} is the set of vertices that are adjacent
% to vertex i.
%
% Copyright (c) 2004 Gabriel PeyrŽ
[tmp,face] = check_face_vertex([],face);
nv... |
2c75e390fc98f8d1e0d87c00ef4aafb6e192795a523e0b40d985b5ecc2ce8b57 | MATLAB | 510 | 21 | %{
# raster correction for bidirectional resonant scans
-> meso.ScanInfo
-> meso.CorrectionChannel
---
template : longblob # average frame from the middle of the movie
raster_phase : float # difference between expected and recorded scan angl... |
a8a721cee3cdd641c7667fec36edf96be978bc53707bbaa1a99bc2badc79bae1 | MATLAB | 510 | 25 | function h = plot_dots(xVals,inCell)
% h = plot_dots(xVals,inCell)
% plots each value in inCell as dot jittered artificially in x dim. each
% cell is x coord per xVals
%
% jbh 2/27/21
if nargin == 1
inCell = xVals;
xVals = 1:length(inCell);
end
xCell = cell(size(inCell));
xw = min(diff(xVals)).*.... |
b506a5fdaf5595b148fee39918d60e384bba7f20a67840eaa956b7aa3276ee4a | MATLAB | 510 | 20 | function [p,tval] = ttest2fast(x,y)
dim = 1;
nx = size(x,1);
ny = size(y,1);
s2x = nanvar(x,[],dim);
s2y = nanvar(y,[],dim);
xmean = nanmean(x,dim);
ymean = nanmean(y,dim);
difference = xmean - ymean;
s2xbar = s2x ./ nx;
s2ybar = s2y ./ ny;
dfe = (s2xbar + s2ybar) .^2 ./... |
e072abeba307ac15c53513aee6fc107748c666f2c8c64d11b6e2b45762fc9c6f | MATLAB | 510 | 21 | %{
# raster correction for bidirectional resonant scans
-> reso.ScanInfo
-> reso.CorrectionChannel
---
template : longblob # average frame from the middle of the movie
raster_phase : float # difference between expected and recorded scan angl... |
7a569b99d6575b234752c07254fd23e72abed28e54714f84c46f66066821b856 | MATLAB | 511 | 15 | function [C] = spm_cov2corr(C)
% returns the correlation matrix given the covariance matrix
% FORMAT [R] = spm_cov2corr(C);
%__________________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% Karl Friston
% $Id: spm_cov2corr.m 1143 2008-02-07 19:33:... |
d8ce8c0e6268953a9318717e8bfeb42188aae3ee8149727ec63145abf0b24582 | MATLAB | 511 | 24 | function [blockInd, indEx, indRef, indSat] = sero_pulseq_shotToBlockInd(seq, n)
% function [blockInd, indEx, indRef, indSat] = sero_pulseq_shotToBlockInd(seq, n)
if numel(n) == 1 %#ok<ISCL>
n = [n n];
end
if all(n==0)
n = [1 numel(seq.blockEvents)];
end
[indEx, indRef, indSat] = sero_pulseq_getRFBlockInd(seq... |
f2d031d84cd8f0849af244680a8fd1e3e7587d71d744765727a8d87afde1ac3a | MATLAB | 511 | 15 | function [traceX, traceY] =getTraces(beforeROI, afterROI, roiPosition)
if ~isempty(roiPosition)
beforeROI = beforeROI(roiPosition(2):roiPosition(2)+roiPosition(4)-1,roiPosition(1):roiPosition(1)+roiPosition(3)-1,:);
afterROI = afterROI(roiPosition(2):roiPosition(2)+roiPosition(4)-1,roiPosition(1):roiPosition(1)+roiPos... |
3025c6b036e3a043bbf65b0fd971f570dd944f9d56ffe731e3f4b8d9ba389c25 | MATLAB | 512 | 18 | % Define global variables for testing (needed to display default values for
% uimenu objects, but cleared at the end of this script)
global warpFactorLevel vigilance bias learningRate maxNumCategories maxNumIterations sampleInterval resample
% Set warpFactorLevel to 3 by default
warpFactorLevel = 3;
% Load the rest o... |
6cfa7b08ce8b19e0d24fe47166fca242afbd0d4983b011b5f73720d4aa223c10 | MATLAB | 513 | 16 | %{
# Monitor luminance calibration
-> experiment.Scan
---
pixel_value : mediumblob # control pixel value (0-255)
luminance : mediumblob # luminance in cd/m^2
amplitude : float # lum = Amp*pixel_value^gamma + offset
gamma : float #
... |
a3427aa5fe107afd34e6856fa6381059176b64e6886659878e48656314111d96 | MATLAB | 515 | 12 | %{
experiment.PMTFilterSet (lookup) # microscope filter sets: dichroic and PMT Filters
pmt_filter_set : varchar(16) # short name of microscope filter set
---
primary_dichroic : varchar(255) # passes the laser (excitation/emission separation)
secondary_dichroic : varchar... |
ccf0f5cce56ceb150d90562c00b9dbac4811d028f2ac1ba0e8b475da5a210075 | MATLAB | 515 | 19 | function candoit = canGetEuclideanHessian(problem)
% Checks whether the Euclidean Hessian can be computed for a problem.
%
% function candoit = canGetEuclideanHessian(problem)
%
% Returns true if the Euclidean Hessian can be computed given the problem
% description, false otherwise.
%
% See also: canGetHessian getEucli... |
e0b35d451a91f524cfbb5b050b06354436e64392a7c713ecb71eb211eb35869f | MATLAB | 515 | 16 | %% process HCP data with Brainstorm
hcp_dir = '/path/to/megdata/and/results/';
reports_dir = strcat(hcp_dir, 'brainstormReports/');
loadedsubj = load(fullfile(hcp_dir, 'myMEGList.mat'));
subjList = split(loadedsubj.myMEG, '_');
subjList = subjList(:,2);
channels = load(fullfile(hcp_dir, 'myMEGbadChannels'));
badChann... |
27004c959f6b41431aa6afeacfeac23ea82e9c584ec85bb160dbb1c04a18705e | MATLAB | 516 | 17 | function [fwMax,bwMax]=wavesHunterAllFreqs(data,samplingRate)
numberElectrodes=size(data,1);
yElec=1:numberElectrodes;
durationSignal=size(data,2)/samplingRate; %it's in second.
dF = 1/durationSignal;
fx = -samplingRate/2:dF:samplingRate/2-dF;
fy=(size(data,1)... |
37dd22ee2f09d07e10cb3bdb8e469447af9210769e5aa47fb0118fd7e190b7f3 | MATLAB | 516 | 19 | classdef ElementWise < dagnn.Layer
%ELEMENTWISE DagNN layers that operate at individual spatial locations
methods
function [outputSizes, transforms] = forwardGeometry(self, inputSizes, paramSizes)
outputSizes = inputSizes ;
transforms = {eye(6)} ;
end
function rfs = getReceptiveFields(obj)
... |
8ada50d97d9b93fd044de94a84746b36bddf759eccc7f2f8a156c4c6d2819227 | MATLAB | 516 | 16 | function Wm = gram_definite_integral(A,B,T)
% Calculate gram matrix by definite integral
% Slow but also works on uncontrollable system
%
% W = \int_{0}^{T} e^{A t}BB^Te^{A^T t}dt
%
% Inputs: A, N-by-N matrix, system matrix
% B, N-by-M matrix, control matrix with M control nodes
% ... |
261a2081355ca2b25fc0d2b30272974cf5199a1ab2ec85dc7f0891520089e773 | MATLAB | 517 | 23 | function [tMin,fMin,tBreak1,tBreak2,Q2,tMinAll]=essential_distMinAnglePair(Q1,Q2,kFlip)
switch kFlip
case 1
%nothing to do
case 2
Q2([2 3 4 6],:)=-Q2([2 3 4 6],:);
case 3
Q2([4 5],:)=-Q2([4 5],:);
case 4
Q2([2 3 5 6],:)=-Q2([2 3 5 6],:);
otherwise
error('Valu... |
51fcfdbc41af9076c8528c5e763cde9ff3a5fe152d276274ea4089b417d08d9d | MATLAB | 517 | 12 | function [stat,xcorr_m] = gp_xcorr(AllData,tICAData, lagdices)
%UNTITLED6 Summary of this function goes here
% Detailed explanation goes here
xcorr_m=zeros(lagdices*2+1,size(AllData,1));
for j_parcels=1:size(AllData,1)
[xcorr_m(:,j_parcels), ~] = xcorr(normalise(AllData(j_parcels,:)'),normalise(tICAData(j_parcel... |
75cd9a7d52061a0dd699185f56e67574c8d5d539a01dea7f6c1cf2a434ecadae | MATLAB | 517 | 24 | function writeGCFtoPDF(f)
def_fn = 'Default.pdf';
[file, path] = uiputfile('*.pdf', 'Select File Name', def_fn);
if ~file
return;
end
set(f, 'Renderer', 'Painters');
set(f, 'Units', 'inches');
figpos = get(f, 'Position');
set(f, 'Units', 'Normalized');
aspect = figpos(4)/figpos(3);
if (aspect<8/1... |
7cae4f6673d6e0a492f3eee3629920189989400adfc31b199da4e185b58058e4 | MATLAB | 517 | 22 | figure(10)
plot(cos(linspace(0, 7, 1000)));
xlabel('x (\mum)')
ylabel('sin(x)')
title('Test export')
set(gcf,'color','w')
% axis square
set(gcf, 'Position', [100 100 400 300]);
set(gca,'FontSize',10)
set(gca,'Fontname','Arial')
set(gca, 'TitleFontSizeMultiplier', 1)
%
xlhand = get(gca,'xlabel');
set(xlhand,'fontsize',1... |
93c42447c7797da51a5e5fa5af83578210f7462c211879b2fa42d60e5372d9c0 | MATLAB | 517 | 28 |
% Main experiment script
clc; clear;
% Example synthetic data (replace with NAB/CIC files)
N = 10000;
data = randn(N,1);
labels = zeros(N,1);
labels(500:520) = 1;
window_size = 200;
% Preprocess
[normalized, spikes] = preprocess(data, window_size);
% Spiking CNN
features = spiking_conv(spikes);
% Reservoir + ELM
... |
abf34de7b7eacebd612d118094d7f9fa95510e694d702ad3db1620dc37f2c2c3 | MATLAB | 517 | 12 | function control_max_eig = bin_shuffling(SpikeCount,number_of_surrogates)
control_max_eig=zeros(1,number_of_surrogates);
for surr_idx = 1:number_of_surrogates
ControlSpikeCount=zeros(size(SpikeCount));
for neuron_idx = 1:size(SpikeCount,1)
ControlSpikeCount(neuron_idx,:) = SpikeCount(neuron_idx,randper... |
f16907d46e3b9a444757af67ff1c348b703942ee784a7ae1203b891cb56682f0 | MATLAB | 517 | 21 | function [posterior] = tapas_linear_estimate_interface(data, model, ...
inference)
%%
%
% aponteeduardo@gmail.com
% copyright (C) 2016
%
% Verify input
tapas_validate_data(data);
tapas_validate_model(model);
tapas_validate_inference(inference);
[data] = tapas_linear_prepare_data(data, model, inference);
[model]... |
2c35387a5dea67d8e4c2abe569225d04df5367ec223a0e9ebf2fd0e4bc81ff97 | MATLAB | 518 | 18 | function Us = get_PCproj(S1, row, col, wPCA, maskMaxChans,nt0min)
[nT, nChan] = size(S1);
dt = -nt0min + [1:size(wPCA,1)];
inds = repmat(row', numel(dt), 1) + repmat(dt', 1, numel(row));
clips = reshape(S1(inds, :), numel(dt), numel(row), nChan);
mask = repmat([1:nChan], [numel(row) 1]) - repmat(col, 1, nChan);
Mas... |
30dd58ee22a2ef7b8be83c454cfacad60c8578e9d7cbb7b3ba90d605d707d81b | MATLAB | 519 | 22 | function interactive_PROMAX_ASSEMBLY_DETECTION_VALIDATION()
clc;
ROOT = input( 'ROOT = ' , 's' );
items = dir( [ ROOT ] );
items = transpose( items );
items = items( [ items.isdir ] & [ ~strcmp( { items.name } , '.' ) ] & [ ~strcmp( { items.name } , '..' ) ] );
items = items( shuffle_vector( 1:numel( items ) ) );
... |
65c812cd61b6bb8f6f1aab42862afaf714956579db42f7656fa35686ff4f4bbd | MATLAB | 519 | 19 | classdef ElementWise < dagnn_bc.Layer
%ELEMENTWISE DagNN layers that operate at individual spatial locations
methods
function [outputSizes, transforms] = forwardGeometry(self, inputSizes, paramSizes)
outputSizes = inputSizes ;
transforms = {eye(6)} ;
end
function rfs = getReceptiveFields(obj)... |
7c9c5e8d667c2ac1c7217edc597b9c307c31dcfedbb0b799fe1fc6b7894d320e | MATLAB | 519 | 18 | % extract eye position traces
function [pos_x pos_y] = extractEyePos(animal_id, session, scan_idx)
s = struct('animal_id', animal_id, 'session', session, 'scan_idx', scan_idx) ;
rv = preprocess.EyeTrackingFrame & s ;
tuples = fetchn(rv, 'center') ;
pos_x = zeros(length(tuples),1) ;
pos_y = zeros(length(tuples),1) ;
fo... |
e613d7771b6ff2ede81d5a17b86fe2824e3ff0fefb6f2b06898bd93cbfb08d65 | MATLAB | 519 | 18 | clear all
close all
figure;clf
subplot(2,2,1);ylabel('ylabel1');title('title1')
subplot(2,2,2);ylabel('ylabel2');title('title2')
subplot(2,2,3);ylabel('ylabel3');xlabel('xlabel3')
subplot(2,2,4);ylabel('ylabel4');xlabel('xlabel4')
[ax1,h1]=suplabel('super X label');
[ax2,h2]=suplabel('super Y label','y');
[ax3,h2]=su... |
b6d544373873b0f1c9a90c3bac6974d6aa5c74c53594da6f22f12170b9202cd3 | MATLAB | 520 | 23 | function [Result] = Feta(eta,y,sig2);
%Implemented by Christian Beckmann
if nargin<3
sig2=1;
end;
bm=sig2*(1-sqrt(y))^2;
bp=sig2*(1+sqrt(y))^2;
Result=zeros(size(eta));
teta=bm:1/1000:bp;
feta=zeros(size(teta));
feta=((2*pi*y*teta).^(-1)).*sqrt((teta-bm).*(bp-tet... |
eb55e0792499d9b0abd37071314698964805812cdefabd93058d2ea2c07983a2 | MATLAB | 520 | 21 | function [posterior] = tapas_vlinear_estimate_interface(data, model, ...
inference)
%%
%
% aponteeduardo@gmail.com
% copyright (C) 2016
%
% Verify input
tapas_validate_data(data);
tapas_validate_model(model);
tapas_validate_inference(inference);
[data] = tapas_linear_prepare_data(data, model, inference);
[model... |
1e60674665b781ade84c0686fe6e5ba189e235aa74ef50850410126e7fdaf974 | MATLAB | 522 | 30 | function dH = hausdorff(A, B, d)
% A, B: two subsets(patches)
% d: geodesic distances between all vertices on cortex
% A=A(A>=0);
% B=B(B>=0);
dH = max(compute_dist(A, B,d), compute_dist(B, A,d));
end
% Compute distance
function dist = compute_dist(A, B,d)
m = size(A);
n = size(B);
d_vec = [];
D = [];... |
24affc8aebe4d3b34ff582778cfb5bb028a85286f58894804b70d559d99b2677 | MATLAB | 522 | 18 | function [MNICen MATCen]=TMSMNICenter(imagedir)
% images = spm_select(1,'image','masks');
[ hdr dat] = TMSReadNii(imagedir);
dat = reshape(dat,hdr.dim(1),hdr.dim(2),hdr.dim(3));
[dx dix] = sort(dat(dat>0));
DX = unique(dx);
for i = 1:length(DX)
DAT = zeros(size(dat));
DAT(dat==DX(i)) = 1;
STATS = ... |
b277ea1ae51677bb966afd2043756348a6646ca04604daaee7358f5bacf1a758 | MATLAB | 522 | 39 | function y = choosvd( n, d)
if n <= 100
if d / n <= 0.02
y = 1;
else
y = 0;
end
elseif n <= 200
if d / n <= 0.06
y = 1;
else
y = 0;
end
elseif n <= 300
if d / n <= 0.26
y = 1;
else
y = 0;
end
elseif n <= 400
if d / n <= 0.28
... |
6f6ccdb8aadf37952298dfe82294f8db37e86414fd4bc65f462510f5e40cea07 | MATLAB | 523 | 21 | function RDMs=concatRDMs_unwrapped(varargin)
% concatenates dissimilarity sets (ltv or square RDMs). All inputs should
% have the same number of dissimilarity entries.
%__________________________________________________________________________
% Copyright (C) 2009 Medical Research Council
import rsa.*
import rsa.fig.*... |
5634ee74153b22d88ac3ea3a8507afee7622a988f63cc6d8a922939d5f1adcff | MATLAB | 524 | 15 | function obj = elbo_residual_precision(obj)
D = prod(obj.lat);
if ~isfinite(obj.nl0) || obj.nl0 == 0
obj.lbl = 0;
else
obj.lbl = 0.5 * D * obj.nl0 * log((obj.lam/obj.nl)/(obj.lam0/obj.nl0)) ...
+ 0.5 * D * obj.nl * (1 - (obj.lam/obj.nl)/(obj.lam0/obj.nl0)) ...
... |
424bc753ae558f668c977b6200b761afb92da16ff7e061165bb9b943649e668a | MATLAB | 525 | 16 | function names = fieldnames(this)
% Fieldnames method for GIfTI objects
% FORMAT names = fieldnames(this)
% this - GIfTI object
% names - field names
%__________________________________________________________________________
% Copyright (C) 2008 Wellcome Trust Centre for Neuroimaging
% Guillaume Flandin
% $Id: f... |
531dc997e8b154784336e87d0a029710f2738d71fa71e518326fd9f73d131dbc | MATLAB | 526 | 32 | function [y] = tapas_sem_trapp_int(u, theta, ptheta, sloppy)
%% Integrate the model of Trappenberg.
%
% Input
% u -- Input
% theta -- Parameters
% slopp -- Optional, if true the input is not checked. Defaults to false.
%
% Output
% y -- Simulated signal.
%
% aponteeduardo@gmail.com
% ... |
54042f06203b7fac924533a0665443ade80319c724f5945c4a91848b31928878 | MATLAB | 526 | 15 | function ret = findScaledMADOutliers(data)
% Determine if an array contains values that are outside of three scaled MAD
numElems = numel(data);
if numElems < 1
return
end
deviations = data - median(data);
absDeviations = abs(deviations);
mad = median(absDeviations);
% Scale the MAD b... |
8eae0b452078e7347fa822fc22a93edd5c385175d20394da476d6e8271b5b2c3 | MATLAB | 526 | 12 | %This function gives the matrix with the targets(paired). This is used in
%expDesign
function [MYfixationTargets_matrix] = targetsRepeated(fixationTargets)
cfg.design.fixationTargets=zeros(size(fixationTargets,1), (size(fixationTargets,2)+size(fixationTargets,2)));
for t=1:size(fixationTargets,2)
cfg.desig... |
793b8ee6a3257209e5e69dc145f57c768201382f7698989804f82c677aa244a2 | MATLAB | 527 | 16 | function [x_lim, y_lim] = ZoomToSelectedRectangle(I) % JB 17/06/2021
%ZOOMTOSELECTEDRECTANGLE Interactive choice of zoom window which can be
%different shape to input image
% After you have selected and adjusted your zoom rectangle, right click
% and select "Crop image" to continue
%figure
%ShowImag... |
c67ecfcbaccc0ab36efa41ceb0c9f7ff2e3cf8015cc93c9d3715e024de761670 | MATLAB | 527 | 14 |
function showGlyph(bDir,data1)
K = convhulln(double(bDir'));
%data = data / max(data(:));
data = data1;
data(data<0) = 0;
d = bDir.* (ones(3,1)*(data(:))');
patch('Faces',K,'Vertices',d','facecolor','interp','edgecolor','none','FaceVertexCData',data(:),'CDataMapping','scaled','facealph... |
003fbedce5423e23841d18cf9a16a579e2ba9a1db985ecbf668c73fa45335043 | MATLAB | 528 | 26 | function y = subset(x, varargin)
if nargin < 3 || isempty(varargin{2}),
varargin{2} = 1:size(x,2);
end
if nargin < 2 || isempty(varargin{1}),
varargin{1}= 1:size(x,1);
end
if iscell(x),
y = cell(size(x));
for i = 1:numel(x)
y{i} = misc.subset(x{i}, varargin{:});
end
else
... |
02add6bb8c994fd07d809deaf63eed9e6e7acf865e576fdfac77cc57cf2030e7 | MATLAB | 528 | 12 | function control_max_eig = bin_shuffling(SpikeCount,number_of_surrogates)
control_max_eig=zeros(1,number_of_surrogates);
for surr_idx = 1:number_of_surrogates
ControlSpikeCount=zeros(size(SpikeCount));
for neuron_idx = 1:size(SpikeCount,1)
ControlSpikeCount(neuron_idx,:) = SpikeCount(neuron_idx,r... |
29910dca45c21ab841894cfa3759035971a92f0e59fdf06ce27f87a217fe5c3c | MATLAB | 528 | 16 | function [attack_onset_frames,attack_offset_frames] = get_onset_frames(attack_frames)
if ~isempty(attack_frames)
onset_frame_idx = find(diff(attack_frames)>1)+1;
onset_frame_idx(onset_frame_idx>length(attack_frames)) = [];
attack_onset_frames = [attack_frames(1);attack_frames(onset_frame_idx)-1];
... |
bd9fbd04f7e30a5edeabcd7a364dd7954bcf9e09e2fa25aa99eda6abc4216211 | MATLAB | 528 | 48 | %script Test_BrikLoad
%
%
%
%Purpose:
%
%
%
%Input:
%
%
%
%Output:
%
%
%
%
%
%Key Terms:
%
%More Info :
%
%
%
%
% Author : Ziad Saad
% Date : Fri Dec 15 20:19:14 PST 2000
% LBC/NIMH/ National Institutes of Health, Bethesda Maryland
%Debug Flag
DBG = 1;
BrikName = 'ARzs_CW_avvr.DEL+orig.BRIK';
[err, V, I... |
e14d8a87f20855a7e36b9c27ee2acc8edc8b328b3dc429b8c7ece6dab5ae189a | MATLAB | 528 | 14 | function valid = ll_validate(EEG)
valid = false;
[fA, fB] = uigetfile('.','Select an EDF file','*.edf');
edfPath = [fB fA];
EEG = pop_bidsload(edfPath);
[EEG, transform] = warp_locs( EEG,'derivatives/EEG-IP-L/code/misc/standard_1005.elc', ...
'mesh', 'derivatives/EEG-IP-L/code/misc/... |
0ff16e152b914e844ed7f36bb3f3e7aba7eee7e0a0d3e66821237d2684c9f66e | MATLAB | 529 | 19 | function call_copy()
% clicking on axes within a figure, opens a new figure with only the
% clicked axes in it.
% Usage:
% ff = findobj('type','axes');
% set(ff,'ButtonDownFcn','call_copy');
% (c) Tonio
copyobj(gca,figure);
set(gca,'Position',[0.13 0.11 0.775 0.815]);
set(gca,'ButtonDownFcn','');
h_child=get(gca,'Chi... |
5937fac5a11c0d67593be9950b6f5baee72751a52d9e36df65985112e8b0ce12 | MATLAB | 529 | 21 | % minFunc
printf('Compiling minFunc files (octave version)...\n');
## working around the lack of an -outdir option in octave's mex
function mexme(fn)
cmd = sprintf("mkoctfile --mex --output ../compiled/%s.mex %s.c", fn, fn) ;
[ status output ] = system(cmd) ;
if status!=0
error("Executing command %s\... |
75ca7906845b54c3b232dc412fb88395761362b506ceededb1461db06669449c | MATLAB | 529 | 15 | function tapas_print_logo()
%% Print the logo of tapas.
%
% aponteeduardo@gmail.com
% copyright (C) 2017
%
disp( '_______ _____ _____ _____ ____ ');
disp( ' | | | |_____| | | | ');
disp( ' | ... |
87c6c7d24fa7f3cce8908cc733a859f35cdc302de7001a16198678f2571914be | MATLAB | 529 | 18 | function candoit = canGetSubgradient(problem)
% Checks whether a subgradient can be computed for a problem structure.
%
% function candoit = canGetSubgradient(problem)
%
% Returns true if a subgradient of the cost function can be computed given
% the problem description, false otherwise.
%
% See also: canGetGradient
... |
8986a20a6a0ec044238df283d63eacc374df88452052a147a5407ffe8e1be04a | MATLAB | 529 | 15 | function data_out = sero_pulseq_coilCombineAdaptive_multiShot(data)
% function data_out = sero_pulseq_coilCombineAdaptive_multiShot(data)
% Assume data is in format [xvox, coil, yvox, shot].
% Needs to be in format [coil, yvox, xvox, shot] for converter.
siz = size(data);
data_out = zeros(siz([3 1 4]));
for i ... |
8aae67fcbec6f913ea01a1e3bd98e4d7b1b09822cbfc0906e33a7de1f7158925 | MATLAB | 529 | 17 | %{
# directional drift trials
-> tuning.Directional
drift_trial : smallint # trial index
---
-> vis.Trial
direction : float # (degrees) direction of drift
onset : double # (s) onset time in rf.Sync times
offset ... |
ed27c7325b18de502f1a27639436361509db21bea39f7ce5d0038942688dee5f | MATLAB | 529 | 21 | function D = compute_distance_to_points(X,seeds)
% compute_distance_to_points - compute euclidean distance to a set of points.
%
% D = compute_distance_to_points(X,seeds)
%
% 'X' is a [d,n] matrix, X(:,i) is the ith point living in R^d.
% 'seeds' is a [d,k] matrix.
% D(i,j) = |X(:,j)-seeds(:,i)|^2.
%
% Copyr... |
094efc1209f09f0aeb295f7a0817a7b8011e2cefa7e94bb1dc00592024b6691a | MATLAB | 530 | 17 | function new = write_xxx(string,old)
% Dynamic changing of regular expressions with regexprep.
% Overwrites strings within a string with the same number of X.
%
% Author: Dr. Georg Oeltzschner
% Johns Hopkins University, 08/23/2016
%
% History:
% 2016-08-23: First version of the code.
% 2018-09-13... |
7458853d20f9945caed903794cc8e459c3ecb64044b5eee9324988b0f8fd518a | MATLAB | 530 | 20 | function [Nrank] = get_rank(dWU, variance)
[~, ~ ,Nfilt] = size(dWU);
Rank = [];
j = 1;
for i=1:Nfilt
if(isempty(nonzeros(dWU(:,:,i))))
else
j = j+1;
[~,Ds,~] = svd(dWU(:,:,i));
%To get the correct sign for the peak deep
normsqS = sum(Ds.^2); %// total variance
... |
88be696492cf01f15e458badb75afd475e2042948aca0beaf12fbf6da7bdb88e | MATLAB | 530 | 19 | function candoit = canGetLinesearch(problem)
% Checks whether the problem structure can give a line-search a hint.
%
% function candoit = canGetLinesearch(problem)
%
% Returns true if the the problem description includes a mechanism to give
% line-search algorithms a hint as to "how far to look", false otherwise.
%
% S... |
70f68817adca57c72fec77c4bdbffd90fc2f4fd34b4f1782ca739ff6f5e4b21a | MATLAB | 531 | 24 | % Example function to demonstrate surface alignment for surface-based voxel
% selection
% set directory
d='/Volumes/organized/116_surfing_toolbox/fingerdata-0.2/';
% set up variables
C=struct();
C.action='all';
C.subjid='s88';
C.origvolfn=[d 'glm/anat_al+orig'];
C.fssurfdir=[d 'fs/s88/surf/'];
C.aligndir=[d 'ref/'];
... |
e826d72010a889b36358760515a886599e3740fd88dadbbf85052614ee524c15 | MATLAB | 531 | 21 | function [img_new]=full2cropped(img_pca)
% Convert full size image in MNI space to cropped image
%[~,img_pca]=read(FullImage);
%Dimensions of full image
ins_msk=~~img_pca;
%Bounding box
tmp=squeeze(sum(ins_msk,1));
[y,z]=find(tmp);
max_y=max(y); min_y=min(y);
max_z=max(z); min_z=min(z);
tmp=squeeze(sum(ins_m... |
195b989be80dd97b211440760abc13a4612308232474b4896ce1a76146d931bd | MATLAB | 532 | 21 | %{
# raster correction for bidirectional resonant scans
-> stack.CorrectionChannel
-> stack.StackInfoROI
---
raster_phase : float # difference between expected and recorded scan angle
raster_std : float # standard deviation among raster pha... |
6970ddfff8102ebcc8a26270ac5fca5ca8c319514d3be8614c2f6cba954129d1 | MATLAB | 532 | 15 | [kendrick@surly ~/nsd/ppdata]$ ls -la *prffloc/GLMdenoise_floc_figures/FinalModel.png
a = matchfiles('~/nsd/ppdata/*prffloc/GLMdenoi*figures/FinalModel.png');
a = a([1 2 3 4 5 6 7 8 9 11 10 12 14 13]); % to match order in nsdsetup.m (FINALVERSION HAS RIGHT ORDER)
mkdirquiet('~/Dropbox/KKTEMP/ok/');
for p=1:le... |
db2ede30675d617d4936dd0b9d85eafb784d525f80c925ba096dfae2d3cc1beb | MATLAB | 532 | 21 | %{
# mask produced by segmentation.
-> meso.Segmentation
mask_id : smallint #
---
pixels : longblob # indices into the image in column major (Fortran) order
weights : longblob # weights of the ma... |
e33d33105f55d12561e6e1d8ad7f6c018987415117dfecc9a85249baa3be6407 | MATLAB | 532 | 21 | %{
# mask produced by segmentation.
-> reso.Segmentation
mask_id : smallint #
---
pixels : longblob # indices into the image in column major (Fortran) order
weights=null : longblob # weights of the ma... |
f0fd73d353177fc993e0c5573f7413047c7befcceec6390d47c85b4dffef9089 | MATLAB | 532 | 15 | function sero_pulseq_plot_ktraj(seq)
[ktraj_adc, t_adc, ktraj, t_ktraj, t_excitation, t_refocusing, slicepos, t_slicepos] = seq.calculateKspacePP();
% plot k-spaces
subplot(2,1,1)
plot(t_ktraj, ktraj'); % plot the entire k-space trajectory
hold on;
plot(t_adc,ktraj_adc(1,:),'.'); % and sampling points on the kx-axis... |
1e7c9e1b8c3671d7803ba48939b2f4cbadd5b809286a20a15b05cb24081062de | MATLAB | 533 | 28 | function [ m ,bdm] = cal_info_s( A,L)
r=0;
c=0;
for it=0:1
[AA,rown,coln]=mat_extend(A,it);
if rown~=0
r=log2(rown)+2.43502031602103;
end
if coln~=0
c=log2(coln)+2.43502031602103;
end
[I_ID]=get_mat_ID_INFO(AA,L);
B=I_ID(1,:);
y = unique(B);
temp = sum(unique(I_ID(2,:)));
II=y;
N = numel(y)... |
50f2448a0f28415c15f36a81bb1cef1e145507eb034a8fc8e223ab1004f9decb | MATLAB | 533 | 25 | function sformatted = mrvParamFormat(s)
% Converts s to a standard mrVista parameter format (lower case, no spaces)
%
% sformatted = mrvParamFormat(s)
%
% The string is sent to lower case and spaces are removed.
%
% Example:
% mrvParamFormat('Exposure Time')
%
% See also: any of the get functions should have th... |
ca1f3882b3a7658a05416bc9d681af1562cb702cd55ad422f5bbc4a3d6e0398d | MATLAB | 533 | 41 | function [pars] = tapas_sem_hir_pars(data, model, pars)
%%
%
% Input
%
% Output
%
% aponteeduardo@gmail.com
% copyright (C) 2016
%
if ~isfield(pars, 'T')
pars.T = ones(size(data, 1), 1) * linspace(0.1, 1, 8)' .^ 5;
end
if ~isfield(pars, 'ndiag')
pars.ndiag = 1000;
end
if ~isfield(pars, 'seed'... |
558a07ebcfbbad987511d108b26097e9142fec137b9fa3817fb219f35633e554 | MATLAB | 534 | 26 | function varargout = tapas_uniqc_example_slider4d()
%creates 4D dataset numerically and runs tapas_uniqc_slider4d to show capability of it
%
% tapas_uniqc_example_slider4d()
%
% IN
%
% OUT
%
% EXAMPLE
% tapas_uniqc_example_slider4d
%
% See also
% Author: Lars Kasper
% Created: 2013-05-15
% Copyright (C) 2013 In... |
6d75bf1540dc73aa568b9913ec37d3ddc55dd1a1d3ef60d875d981bab7b889ef | MATLAB | 534 | 17 | function indices = findmin(data,k)
%findmin - find local maximum with a window length of k, if k<2, it
%calculates global maximum
%
% (C) 2016-2025 by Ralitsa Todorova
%
% This program is free software; you can redistribute it and/or modify
% it under the terms of the GNU General Public License as published by
% the... |
8e13d9cf84882a68b46eea83b12fa374ea715612b4b1918d3681d97f8a813c8b | MATLAB | 534 | 20 | function [fval_1,x2_new,fval_2]=nested_contraction_obj(x1,x2)
%% the function f(x)=(x+a)^(1/1.01) is a contraction
% example a) to use arguments that update themself within the routine,
% and b) of a nested contraction approach.
global counter_global
count=0;
while 1
count=count+1;
x2_new=(x2+1/x1)... |
94719e85773840b081b6c17aa422eefcabf980e9c461e711ab022c6a4e55d24e | MATLAB | 534 | 21 | function window = my_hann(length)
%
% a hann windowing function (i.e., a cos^x function) for windowing with the
% CW regression toolbox. needed if you do not have the signal-processing
% toolbox!!
%
if rem(length,2)
% Odd length windowindowindow
x = (0:((length+1)/2)-1)'/(length-1);
window = 0.5 - 0.5*cos... |
c1a6cfef52eb1965334cead1b450751cf8e7017c814cc6dff9f0f25611499b3b | MATLAB | 534 | 20 | function Z = dzip(M)
% DZIP - losslessly compress data using gzip
% FORMAT Z = dzip(M)
% M - byte stream to compress
% Z - compressed output
%
% See also DUNZIP
% This function uses the public domain ZLIB Deflater algorithm.
% Carefully tested, but no warranty; use at your own risk.
% Michael Kleder, Nov 2005
% Mo... |
4b5409469d4918c23027456a166004e122c307c9c6d23966cbb72ae6bbc3f934 | MATLAB | 535 | 19 | function [ params ] = nmri_get_dataset_params( params, dataset_mapping )
% will modify the params according to dataset mapping
if ~isempty(dataset_mapping)
if ~isstruct(dataset_mapping)
% should be a file then
if ~exist(dataset_mapping,'file')
error(['could not find ' dataset_mapping])
end
% check if has pa... |
d9d1615efa88548dc4af850c64186f327446c4dded013ce02fd0a542cecc4212 | MATLAB | 535 | 20 | function [err,rcor] = mean_sq_error(y,z)
% Normalised mean squared error and correlation coefficient
% [err,rcor] = mean_sq_error(y,z)
%
% err = sum((y-z).^2)/sum((y - <y>).^2)
% rcor = sum((y - <y>).*(z - <z>))/sqrt(sum((y-<y>).^2)*sum((z-<z>).^2))
% GoF = 1 - err
[N,T,Ntr] = size(y);
y = reshape(y,[N,... |
e0c1ef63b94375fa46479f4db5d938afd18e814150e2491c73e3c76de440497d | MATLAB | 536 | 25 | function runFinemapFromFiles(a_mat_path, glmt_mat_path)
%rng(32193213, 'twister')
D1 = load(a_mat_path);
D2 = load(glmt_mat_path);
A = D1.a;
glmt = D2.glmt;
M = size(A,1);
assert(isequal(size(A),[M M]), 'A must be square');
assert(numel(glmt)==M, 'glmt length mismatch');
theta = FinemapMiXeRv0(A,glmt);
... |
e8ab4bb0b80464994f6736ad866370b17b5b76ce55b975b38be451aa980db1a8 | MATLAB | 537 | 16 | function [T P] = TMSttest2_cov(DepVar,GroupLabel, Covs)
% DepVar=[1 2 34 4 5 4 5 11 44]'
% GroupLabel=[1 1 1 1 1 2 2 2 2]'
% Covs = [1 2 1 2 4 5 3 3 4 ; 1 2 1 1 1 1 1 1 2]'
Df_E=size(DepVar,1)-2-size(Covs,2);
[b,r,SSE_H] = rest_regress_ss(DepVar,[ones(size(DepVar,1),1) , Covs]);
% Calul... |
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