sha256 stringlengths 64 64 | language stringclasses 28
values | size int32 1 491k | lines int32 1 23.2k | content stringlengths 1 200k |
|---|---|---|---|---|
b57000062eaabc3c530b78100e46335f7aa610c8d0e66b939c6555d5033ddc9f | Java | 1,731 | 60 | package astar;
public final class Util {
public static int indexOfAny(String haystack, String needles) {
for (int i = 0; i < haystack.length(); i++) {
for (int j = 0; j < needles.length(); j++) {
if (haystack.charAt(i) == needles.charAt(j)) {
return i;
... |
655a7e76844e6669263d15d1e5d292b38d6ca8192092e3d331bf6a5aac6a9e5b | Java | 1,759 | 49 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
344f2e4abfbc67dc699f122350149abdea1393a2ca686dce4fa9e66377400f1d | Java | 1,763 | 48 | package jguis;
import ij.ImagePlus;
import net.imglib2.Cursor;
import net.imglib2.IterableInterval;
import net.imglib2.RandomAccess;
import net.imglib2.img.ImagePlusAdapter;
import net.imglib2.img.Img;
import net.imglib2.type.NativeType;
import net.imglib2.type.Type;
import net.imglib2.type.numeric.NumericTy... |
613367ef1ae33ec0a5adcb2086cfd231a562b1f67d67fbf3adfc9a8af46e109b | Java | 1,763 | 45 | /*******************************************************************************
* Copyright (c) 2014 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
cd9a0704af9fad35072278f60bd95822dcd115cacd1f3634b526353eb4e43a9d | Java | 1,784 | 52 | package jalgs.jfit;
import jalgs.jstatistics;
public class fit_kde_gaus{
public static float get_kde_stdev(float[] data){
//this uses the scott (1992) method
//silverman used a leading factor of 0.9--narrower bandwidth
//assumes the data is normal and univariate
//will tend to over estimate the k... |
13ef7de782df70543ed95e21af863b051bdc7b243a9ea6415172f9375826c6a1 | Java | 1,809 | 48 | /*******************************************************************************
* Copyright (c) 2017 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
6f80535d5e92607ececd593aba291b04b673bbadf4511ae32520b22b42ea802b | Java | 1,815 | 47 | /*******************************************************************************
* Copyright (c) 2019 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
15c5a84642d2d5ed3f9fd8da3beb4e793a09882f702dc4fe6b722b91cf9d0707 | Java | 1,816 | 45 | package jalgs.jseq;
import jalgs.table_tools2;
import java.io.File;
import java.util.ArrayList;
import java.util.List;
public class GTFReader{
public List<Object[]> getGTFFile(String path){
//gtf files are tab delimited with the following fields:
//0: chr, 1: source (ensemble), 2: type, 3: start, 4... |
bff3e96534a4b4dd0a408f235769f3038d1e56ca03f5ad36696c68ac35594a0f | Java | 1,833 | 54 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this dis... |
54139a104f4787c88bd31449a4b43b215cc612c49f81e118f4848ea620afd726 | Java | 1,843 | 42 | /*******************************************************************************
* Copyright (c) 2016 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
264144465a9b96ec0f448886f43ef6bdb759ec5770e0beb8bf612cd6c4c96036 | Java | 1,855 | 72 | /*
* To change this license header, choose License Headers in Project Properties.
* To change this template file, choose Tools | Templates
* and open the template in the editor.
*/
package org.micromanager.remote;
import org.micromanager.acqj.main.Acquisition;
import org.micromanager.ndtiffstorage.NDTiffAPI;
impor... |
85a894f044214e6e8d21f48495bb464f123a8ac1598a08063da9109c17e597e4 | Java | 1,859 | 54 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
8bad02e935216a9211b6b006a795560df81b138f6b139eb1f39cb594d2d80d76 | Java | 1,859 | 54 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
dbc02e372d40c8674e4e2fab58bfe63020fd7fbbff9da54f435b00df61caad28 | Java | 1,864 | 51 | /*******************************************************************************
* Copyright (c) 2015 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
dffbcfcdb94db62a934d26170b5946a593f6120988436cff104330849b4f40ee | Java | 1,864 | 52 | /*******************************************************************************
* Copyright (c) 2013 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
8652a57f7568688ecde77a14bd5fce7d8ad6cbfea2b41e931ee306e6afbaed30 | Java | 1,871 | 54 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
d2a5c2c812a574ad1a5ad04e9634c1a4265f126cdc5b776f22cc0d100133f862 | Java | 1,875 | 54 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
054eb93af13ed027918f168d0a44dcf35c6d5876e6926d21cbfa0cb52e5fea3b | Java | 1,890 | 53 | package jguis;
import loci.common.services.ServiceFactory;
import loci.formats.ChannelSeparator;
import loci.formats.FormatTools;
import loci.formats.FormatWriter;
import loci.formats.IFormatWriter;
import loci.formats.ImageWriter;
import loci.formats.MetadataTools;
import loci.formats.meta.IMetadata;
import... |
436b2cb27e146e7ed59e4c0ee95b7bed49949d6f0795651da2a0b72e05b4d999 | Java | 1,901 | 53 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
d381d16dd4ef0e46c787adc3b12d69e7bd61f59dba833500bae46562c38e3d3c | Java | 1,901 | 49 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
07ee6cb8bbd2fc1461e067b81f922add111cf0ed6c5b21e73d0a1fa55afede0c | Java | 1,902 | 52 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
8a8e077264e748e0718e47d0af55f2cf4976bf4b3fa315560c49822af29f0369 | Java | 1,920 | 56 | /*******************************************************************************
* Copyright (c) 2016 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
ddbcd661d27fcb2578f82f971343fa73e9de117f91669fa436fcbc0f3fce2458 | Java | 1,924 | 65 | package astar;
class CCGBankParsePrinterVisitor implements SyntaxTreeNode.SyntaxTreeNodeVisitor {
public static String tree2string(SyntaxTreeNode entry) {
StringBuilder result = new StringBuilder();
if (entry == null) {
return "FAIL";
} else {
entry.accept(new CCGBa... |
a65769f244a73653d93118c2a4e5e5d6255576cc2cb6e03da0cefe3172b188a0 | Java | 1,936 | 53 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
3dc73c36536d5994ff27fcb004bf883e559b152ac654408b34e2f4c7f1b6cf53 | Java | 1,941 | 48 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
6a3c977cd97561f6fdf62370756f36e06d08744b366d385d0111674afb2a3bdb | Java | 1,942 | 59 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this dis... |
96a8fc5df7a63b9de176c0fb442b668a0b0a37079f5183d8a6e6d619b732c02e | Java | 1,961 | 68 | /*
* To change this license header, choose License Headers in Project Properties.
* To change this template file, choose Tools | Templates
* and open the template in the editor.
*/
package org.micromanager.remote;
import org.micromanager.acqj.api.AcquisitionAPI;
import org.micromanager.acqj.main.XYTiledAcquisition... |
b3dc3a6d0c02e852f84153b82b0aa73d02a69ebcb675c69a9f6712ed2c6cd536 | Java | 1,964 | 49 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
4f8c8c71f266a83062390d9e7d7bb454339f1e79081e3cd8fa31eb0cd43b1289 | Java | 1,987 | 51 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
d9646e2dec99f2b3644fd7104caf8d9c383349978f2b55be9a694c0697828b21 | Java | 1,991 | 46 | /*******************************************************************************
* Copyright (c) 2014 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
11ff08b144745c090a703cb97659b8f27bf45cb1f8ef4b5c1803e5ff823d33f9 | Java | 2,002 | 55 | /*
* To change this license header, choose License Headers in Project Properties.
* To change this template file, choose Tools | Templates
* and open the template in the editor.
*/
package org.micromanager.remote;
import mmcorej.CMMCore;
import org.micromanager.acqj.internal.Engine;
/**
*
* @author henrypinkard... |
dce656533d0d834030a0298da756ea22e2fb65a9c1be4ffcae00739f7b95f1f4 | Java | 2,033 | 51 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
c55fb330e37b17d00f5d6fda51923f6af690687198bed277ba10adff5a51dc30 | Java | 2,044 | 63 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this dis... |
262cfdab10239608fcc8ad85f6df1e81a40e7f702109d04b665c174ec8b54828 | Java | 2,064 | 57 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
a3a4e91769a267c2e389cb1a007e6cec5fb724e43f22c8c9602e116405e2b557 | Java | 2,076 | 73 | /*******************************************************************************
* Copyright (c) 2013 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
b2ee700a8b721d951441ae7e5518fe50aacd6b1b8a2947a02d8f664e5eeae193 | Java | 2,080 | 60 | /*******************************************************************************
* Copyright (c) 2014 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
6cd5a005b2a3688486237dddb269061f0be6b691459140bc85c15bd7e52b30bf | Java | 2,091 | 62 | package jalgs.jfit;
import jalgs.algutils;
public class linear_unmix{
//here we have some simple utilities for linear unmixing
//(basically an automation class for linleastsquares
public float[][] spectra;
public int startch,endch;
public linleastsquares lls;
public linear_unmix(float[][] spectra,... |
18733e563090c11574a1be31f85f8a75130e6870de66eca9d214b8ae1041feec | Java | 2,111 | 50 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
1ec1b68f1d134e6417548087a23d951906812fe7756e2860d8747f63f9ed9772 | Java | 2,113 | 65 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
7ad40e834e7d6d47817d9442761034cd914af66da9284d55323198873e8aebc1 | Java | 2,136 | 54 | /******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this ... |
abbace5ab571eef06a58a54b347e2dfc34ec9eb646dba0a8156e25a28dfb0faf | Java | 2,141 | 57 | /*******************************************************************************
* Copyright (c) 2014 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
6d7edac4380781179bd3db64a18077a17bd4147c7c85ee472cb5c4bb16545c42 | Java | 2,152 | 65 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this dis... |
e39857a06718373bbeb0b6756510eedb4449860358eb7db7c41fd6fe5fd1cda9 | Java | 2,163 | 61 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
43b163195a2eedfa045f6a898732475b637e93c018f548cea3daabee9eb6b7a0 | Java | 2,164 | 65 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this dis... |
11a63a15bcdc742acfbc2cea559c7d40ba7c158ea3b1728b5ed49002df7ae8c4 | Java | 2,175 | 63 | /*******************************************************************************
* Copyright (c) 2015 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
6a118bdf23f922c285275105c5354c9a2a919878742d80c208215b2e0cdf7c22 | Java | 2,182 | 67 | /*******************************************************************************
* Copyright (c) 2013 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
ed45be732b2eb8d43847052e964a8dcdd8b000cf47aa535f2df0c3a1af00d5af | Java | 2,182 | 57 | import java.io.File;
import java.net.URL;
import java.util.Base64;
import java.util.ServiceLoader;
import org.junit.Test;
import com.arosbio.chem.io.in.SDFReader;
import com.arosbio.chem.io.in.SDFile;
import com.arosbio.cheminf.ChemCPClassifier;
import com.arosbio.cheminf.io.ModelSerializer;
import com.arosbio.data.N... |
738fd874040f4b1b76d4055aa374463acd308508efb68edd567dcd5b439179e6 | Java | 2,188 | 55 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
aee6f8d2d9f7018ee1639137b543f94b8279968c2d0a2bd0179fecd50bbcd872 | Java | 2,188 | 62 | /*******************************************************************************
* Copyright (c) 2014 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
579aa97a0e0a1020b6b0e0788a4e97ba02d02344a754efe4de921bbd517e7d9f | Java | 2,198 | 77 | /*******************************************************************************
* Copyright (c) 2013 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
6908b5278b0db0a2eb1c58029af96d470c5a108dea07ec18e282c4d73904014b | Java | 2,199 | 65 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
7bb2c50a2b4ab724e52c323c461a0710a98e073f42070c3a5d214aa1b067cec2 | Java | 2,204 | 64 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
0090e7c2f28e682cbc0c5a83554a8dae172ff25d1333f4203681e4b9abfc8396 | Java | 2,214 | 52 | /*******************************************************************************
* Copyright (c) 2013 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
6ce39ee2c08d34e448a58d071b25fcec2bd9383c879ca7410cceedeef1d787e5 | Java | 2,221 | 72 | /*******************************************************************************
* Copyright (c) 2015 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
2a5d0d8a29b7f77c7682e56c341a7f97a237124e9400947e5c3de29ece7f874c | Java | 2,223 | 62 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
de679d4e007f72eea930db58f5047cd9dcd43b8442e0153e558553032e213810 | Java | 2,226 | 57 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this dis... |
e3a2a8f267eb47c326744a116a9a1a987e2cb25fa5cc83efddc08f9c82e7b7a7 | Java | 2,237 | 59 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
bae5f55177768c5d50b586891c69cd2bae8884710b7ce83f864189c226a20d34 | Java | 2,239 | 99 | package br.ufrgs.enq.lvpp.sigma.file;
import java.io.File;
import java.io.FileWriter;
import java.io.PrintWriter;
import java.util.Locale;
import java.util.Scanner;
/**
* A class to sort a folder of MOL files by size of molecules
*
* @author gbflores
* @version 1.0.0
*/
public class MolFileSizeSort {
private ... |
3bb109a8e6e2ab983694f322cbf2f75a5ded4ffe849046272e0e1c495ce8f8c2 | Java | 2,254 | 67 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
cab9f4d8ba52e40873c9939448f798308b180e1e7320dc330f4bc259d74cde78 | Java | 2,256 | 85 | /*******************************************************************************
* Copyright (c) 2013 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
2573c47fe33fcec669431bff7121b1c0fb053ea2964553cd2db2b1ee469fea77 | Java | 2,259 | 53 | /*******************************************************************************
* Copyright (c) 2017 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
188739a28685f7cc20e67dd5a224bc30637b13fc8011a6693394dcacf6fb4d34 | Java | 2,267 | 52 | /*******************************************************************************
* Copyright (c) 2020 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
81a256ba378146e449cecc9d11fabe61ac73d0cdfc4325dd5c4d10bea014da60 | Java | 2,269 | 56 | /*******************************************************************************
* Copyright (c) 2016 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
87182e520a3503f9e89bb706e40aac8c2144a5b82a5fe75cff36574efc7151ac | Java | 2,272 | 56 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
863ea435bd3efcd2505425a979ddb7e2a9ca78d1639d0e5ad4b8bc0e7daf104a | Java | 2,277 | 62 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
2b6240947446efe80628705aca8f8d3d6bd2bc94c88a17f8ad8573ecd69ff09a | Java | 2,287 | 66 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
02940fce00f3a0d2c0099b552425ebf75eb9d152a19d115c4a6e6c14b9a78f21 | Java | 2,314 | 62 | /*******************************************************************************
* Copyright (c) 2016 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
b4cc8f49c431661954b326f2d6e315667be11d2d59ba3fe535f5f84f9542a7c2 | Java | 2,315 | 70 | /*******************************************************************************
* Copyright (c) 2013 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
bf099c342376098b5d17b8a067bdbe9a9b7eae1ca82300f6fb17904e5b8c5b60 | Java | 2,319 | 68 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
fe52dcd4876ef330bde8f11178bb418ae1c797cba924476b2848316f62eb8261 | Java | 2,338 | 67 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
ad609bd2a136c71a9f52aa05f2cd8f3a3147f37737e87819a773fed0eb5f2353 | Java | 2,342 | 63 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
01e8f38490f65e1b97358d2a8c2b453312b59363b6434a79af21d4ae5cb1435c | Java | 2,349 | 75 | package com.example.fridgesnap;
import androidx.appcompat.app.AppCompatActivity;
import android.content.Intent;
import android.os.Bundle;
import android.os.Parcelable;
import android.view.View;
import android.widget.Button;
import android.widget.EditText;
import android.widget.TextView;
import android.widget.Toast;
... |
57892833777be4d66155cf28118a14bb10b3daa42da2f031193a2575bc812211 | Java | 2,365 | 89 | import ij.*;
import ij.process.*;
import ij.gui.*;
import java.awt.*;
import ij.plugin.*;
public class apply_gamma_jru_v1 implements PlugIn, DialogListener {
ImagePlus imp;
ImageProcessor firstip;
Object temppix;
boolean canceled;
float min,max,gamma;
public void run(String arg) {
imp=WindowMana... |
39cf9394a8eca34aaf479a4fee82a6cdd2fd45a414cd018fd3dda5f5a0f6c46a | Java | 2,369 | 86 | package jalgs.jfit;
public class fit_loess{
//this class performs local regression parabolic (loess) or linear (lowess) smoothing
//assume equally spaced x values
//weighting function is tricube
public float[] centerweights;
public int span,length,halfspan;
public fitpoly fp;
public fit_loess(int le... |
12b447819cb9a2764204dbb538d9f7d84f9a615a1d79915474c451005fc718a7 | Java | 2,373 | 58 | /*******************************************************************************
* Copyright (c) 2015 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
605e078a2decb945bad1875b0d906372d6fc5da63e2896f868ffb936e73e01a7 | Java | 2,382 | 60 | /*******************************************************************************
* Copyright (c) 2015 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
37f7a1c8e3d103547f251f80c1d9e8c0f3c34cbbebe8a6df176afe5a1216a4f1 | Java | 2,387 | 61 | /*******************************************************************************
* Copyright (c) 2014 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
383ad77e5bb50a612831fed0ea2ea6a2585e134187405ff59284ab987c7592e5 | Java | 2,390 | 68 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
758b10808e664207c2093de74969cd088b4925dd3090d40a97128fe964422d0b | Java | 2,391 | 58 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
e77df8220a9789c642f5ae8c4391d7b1f9cdd21ba128742950619793b8561fb0 | Java | 2,392 | 80 | /*******************************************************************************
* Copyright (c) 2013 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
4a48cfacceb842919772ce4987fb173faf0608b4fd865d8b8d9c8060bfd217f1 | Java | 2,405 | 69 | /*******************************************************************************
* Copyright (c) 2013 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
354a03aba6220fb96da5b6bc4a2a13fd540f0400794909385eea15fc87ae2064 | Java | 2,410 | 87 | package jguis;
import java.awt.Polygon;
import java.util.ArrayList;
import java.util.List;
public class MultiPolygon{
public List<Polygon> contents;
public Polygon poly;
public MultiPolygon(Polygon[] polys){
contents=new ArrayList<Polygon>();
contents.add(polys[0]);
poly=polys[0];
for(in... |
0d2b2388000e4c5fcbcfdb2beaf32d817c9fded6b68d393ec22ffb79a498308b | Java | 2,413 | 79 | /*******************************************************************************
* Copyright (c) 2013 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
9bcb8d6e2a26a9c9cb7258992be5ee51768514e7bee675c53235dc063b04b7b3 | Java | 2,414 | 66 | /*******************************************************************************
* Copyright (c) 2013 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
db156a7c03196ee223d82c52660bcd773cdb15c74af3d6b5fbda275d6b7c5ab9 | Java | 2,431 | 79 | package com.example.fridgesnap;
import androidx.appcompat.app.AppCompatActivity;
import android.content.Intent;
import android.os.Bundle;
import android.view.View;
import android.view.Window;
import android.view.WindowManager;
import android.widget.Button;
import android.widget.EditText;
import android.widget.TextVie... |
3e46a8a025617f25c1ab775fce5e7388f8a3b134852ad02a554238e602348f2c | Java | 2,444 | 71 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
d00cee21f10c217ec8b742700b51acafe21690c8ff1df90f345b6e3231f4d511 | Java | 2,446 | 72 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
a3eb395d4f0634be98ae55870e8cb46ed37f2a11679ae92858b79bedd916905b | Java | 2,447 | 65 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
f00e2541e849e79baa972e33d12d37340c4b1b2b33360f71c8c4941a7ff82396 | Java | 2,452 | 74 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
ad9aff3d008caa7a37f26738a0a3b39a1b55c5168b9d915e77c27e44b4c32cfe | Java | 2,457 | 78 | /*******************************************************************************
* Copyright (c) 2013 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
fbb62a0b578c70d0811e10575ca58704b81720673a756322abe46831879d24c0 | Java | 2,468 | 72 | /*******************************************************************************
* Copyright (c) 2013 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
e328bf6c666e118c6625deda4803fcb63fa2e41af7bbf5206797f04609960db3 | Java | 2,489 | 47 | /*******************************************************************************
* Copyright (c) 2015 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
64a6e4d3c4d276705e5c97c3a9f185aabbd69d2208e3dcca488cd1673f5c2d2f | Java | 2,505 | 66 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
5043aaeda073d9eea062c2b00c7869bd4231b59167ad16f4cfbd27e569d4f5b1 | Java | 2,508 | 71 | /*******************************************************************************
* Copyright (c) 2015 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
fc5510d235adc6b578bea901af7c3547af115674db8076f2818f2a85acd82f54 | Java | 2,513 | 66 | /*******************************************************************************
* Copyright (c) 2018 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
7851c9feeeea30217789eafcfbb53cf7414ce591a8c9fa3170d39077472c6b83 | Java | 2,528 | 81 | /*******************************************************************************
* Copyright (c) 2013 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
81b4fc42c9caa6046ac5fda014314dba9c3b60001fd5bdd5b79db4b07184bc47 | Java | 2,569 | 62 | /*******************************************************************************
* Copyright (c) 2012 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
305c3f961623aa0d1debb7e37911669bf9c5b85c3f77ab3e30c210feaceb4f73 | Java | 2,583 | 63 | /*******************************************************************************
* Copyright (c) 2016 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
3271c04c6e7ed018b340d0eec913d85d175000d39ae6442f7196c497774abf60 | Java | 2,595 | 59 | /*******************************************************************************
* Copyright (c) 2018 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
5df41876f01ab961044780e35fda6cb2d9d958c1ae99b879a66289c03a44a5a6 | Java | 2,627 | 81 | /*******************************************************************************
* Copyright (c) 2013 Jay Unruh, Stowers Institute for Medical Research.
* All rights reserved. This program and the accompanying materials
* are made available under the terms of the GNU Public License v2.0
* which accompanies this... |
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