sha256 stringlengths 64 64 | language stringclasses 28
values | size int32 1 491k | lines int32 1 23.2k | content stringlengths 1 200k |
|---|---|---|---|---|
e21f8f1ba3323b9243625ea7a88600de66bb9a93b16a4dba68da0cf87a760cfa | C/C++ | 710 | 27 | #ifndef DOTQTANNOTATION_H
#define DOTQTANNOTATION_H
#include <QColor>
#include "QtAnnotation.h"
#include "annotationplugin_export.h"
class ANNOTATIONPLUGIN_EXPORT DotQtAnnotation : public QtAnnotation
{
Q_OBJECT
public:
DotQtAnnotation(const std::shared_ptr<Annotation>& annotation, QObject* parent, float... |
2ce85cc44ce5a977d62eb5257ab6b1b8db5f82b98e4692134a906ab8603a5be1 | C/C++ | 717 | 27 | #ifndef POLYANNOTATIONTOOL_H
#define POLYANNOTATIONTOOL_H
#include "AnnotationTool.h"
#include "core/Point.h"
class AnnotationWorkstationExtensionPlugin;
class PathologyViewer;
class QGraphicsLineItem;
class ANNOTATIONPLUGIN_EXPORT PolyAnnotationTool : public AnnotationTool {
Q_OBJECT
public :
Pol... |
20b52b4a0cc686d625cd915b9c7b2852d2c816f2a568509a72db80bef647a97f | C/C++ | 718 | 41 | #ifndef KR_headers
#ifdef MSDOS
#include "io.h"
#ifndef WATCOM
#define close _close
#define creat _creat
#define open _open
#define read _read
#define write _write
#endif /*WATCOM*/
#endif /*MSDOS*/
#ifdef __cplusplus
extern "C" {
#endif
#ifndef MSDOS
#ifdef OPEN_DECL
extern int creat(const char*,int), open(const char*... |
adc98eca791656c1b290565e86e2de7f474233910c66cff44da2ae6e037253c9 | C/C++ | 728 | 35 | /* Abstract interface for a toggleable device
* ------------------------------------------
* @author Tal Eisenberg <eisental@gmail.com>
*/
#ifndef ToggleInterface_h
#define ToggleInterface_h
#include "Arduino.h"
#include <ArduinoJson.h>
#include "Interface.h"
class ToggleInterface: public Interface {
public:
T... |
3fe949a23fe1886f4379fe6b247e485a3aea8c0382d458fc6c9dd5a2967c1795 | C/C++ | 754 | 26 | #ifndef PRPACK_PREPROCESSED_GE_GRAPH
#define PRPACK_PREPROCESSED_GE_GRAPH
#include "prpack_preprocessed_graph.h"
#include "prpack_base_graph.h"
namespace prpack {
// Pre-processed graph class
class prpack_preprocessed_ge_graph : public prpack_preprocessed_graph {
private:
// helper methods... |
96b7cb266d6337a40b020df195a805b4f0d2beeaddb37b49ac168907c04b9e54 | C/C++ | 774 | 38 | /*
* BSD 3-Clause License
*
* Copyright (c) 2016-2021, UniFrac development team.
* All rights reserved.
*
* See LICENSE file for more details
*/
#ifndef __UNIFRAC_STRIPEMAP_H
#define __UNIFRAC_STRIPEMAP_H 1
#include <vector>
#include <stack>
#include <unordered_map>
#include <cstdint>
namespace su {
class StripeMap... |
ca2e521e2d3891eb4978401cb48fc80be5f6829aa148bfa3dea43da1e81f9c5c | C/C++ | 796 | 52 | #ifndef _PathologyEnums
#define _PathologyEnums
#include <string>
#include <map>
#include <vector>
#include <array>
#include "core_export.h"
typedef std::array<float, 4> rgbaArray;
namespace pathology {
struct LUT {
std::vector<float> indices;
std::vector<rgbaArray> colors;
bool relati... |
8f713abdfd267b06c3644cf65a8c5238da42cdedbbff9752010c4b13eec702b2 | C/C++ | 805 | 22 |
// Pytorch C++/Cuda extension tutorial:
// https://pytorch.org/tutorials/advanced/cpp_extension.html
#define CHECK_CUDA(x) TORCH_CHECK(x.type().is_cuda(), #x " must be a CUDA tensor")
#define CHECK_CONTIGUOUS(x) TORCH_CHECK(x.is_contiguous(), #x " must be contiguous")
#define CHECK_INPUT(x) CHECK_CUDA(x); CHECK_CONTI... |
3490f16388815a84fdad3e56df44673d7dbbb8ff0087c8a935aaa883e409e0d1 | C/C++ | 809 | 36 | /* bedFile.h -- for dealing with the bed file format
/
/
/
/ Also contains the definition of a bedElement */
#ifndef BED_INC
#define BED_INC
#define MAXBEDELS 10000000
/*bedEl definition- can currently deal with BED9 format */
struct bedEl{
long int chromStart, chromEnd, thickStart, thickEnd;
int score;
c... |
8ae46df5638c46a1d75ff3a0f42babc7152d53ec6d023c10e78d80f5d2baa9b7 | C/C++ | 836 | 31 | #ifndef POINTSETQTANNOTATION_H
#define POINTSETQTANNOTATION_H
#include "QtAnnotation.h"
#include <QColor>
#include <memory>
#include "annotationplugin_export.h"
class ANNOTATIONPLUGIN_EXPORT PointSetQtAnnotation : public QtAnnotation
{
Q_OBJECT
public:
PointSetQtAnnotation(const std::shared_ptr<Annotati... |
df7c42b66f2614e157987e39903607cc1213706f110a46f65209dc60a0061350 | C/C++ | 842 | 35 | /* You may need to adjust the definition of signal1 to supply a */
/* cast to the correct argument type. This detail is system- and */
/* compiler-dependent. The #define below assumes signal.h declares */
/* type SIG_PF for the signal function's second argument. */
/* For some C++ compilers, "#define Sigarg_t ..." ... |
737bc83073dd995d364b2551afb983c6624beb1b3560433e3a5a21752dac5778 | C/C++ | 851 | 33 | /* Arduino library for controlling a fish feeder (EVNICE EV200GW or similar).
* --------------------------------------------------------------------------
* @author Tal Eisenberg <eisental@gmail.com>
*/
#ifndef Feeder_h
#define Feeder_h
#include "Arduino.h"
#include <AccelStepper.h>
const int STEPPER_SPEED = 500;... |
b5e2c09729b002357d12a9dd3c5a1a5c8c34d283e10e964653da464ee1944962 | C/C++ | 856 | 43 | /*
* MemoryNetworkAdapter.h
*
* Created on: 26 jun 2015
* Author: Daniel
*/
#ifndef SRC_INFOMAP_MEMORYNETWORKADAPTER_H_
#define SRC_INFOMAP_MEMORYNETWORKADAPTER_H_
#include "NetworkAdapter.h"
#include "Node.h"
#include <map>
#ifdef NS_INFOMAP
namespace infomap
{
#endif
class MemoryNetworkAdapter: public ... |
bf3143aef600588670fa56b2efcef90bda2883dab2558afc004fce7e2a8287ec | C/C++ | 856 | 28 | #ifndef MEASUREMENTQTANNOTATION_H
#define MEASUREMENTQTANNOTATION_H
#include "QtAnnotation.h"
#include <QColor>
#include <memory>
#include "annotationplugin_export.h"
class ANNOTATIONPLUGIN_EXPORT MeasurementQtAnnotation : public QtAnnotation
{
Q_OBJECT
public:
MeasurementQtAnnotation(const std::shared_... |
ad0ea4a4ff671f8b27c0a5fddc3c12d835489507432801e61ebd2d5cc410416d | C/C++ | 858 | 30 | #ifndef PRPACK_PREPROCESSED_GS_GRAPH
#define PRPACK_PREPROCESSED_GS_GRAPH
#include "prpack_preprocessed_graph.h"
#include "prpack_base_graph.h"
namespace prpack {
// Pre-processed graph class
class prpack_preprocessed_gs_graph : public prpack_preprocessed_graph {
private:
// helper methods... |
1c84218dac5c9004b7093cd7740ff5e1234ab9f7415761055de362e445f07064 | C/C++ | 861 | 44 | #ifndef _FilterBase
#define _FilterBase
#include "basicfilters_export.h"
#include <mutex>
#include <string>
#include <memory>
class ProgressMonitor;
class BASICFILTERS_EXPORT FilterBase {
std::mutex _cancelMutex;
std::weak_ptr<ProgressMonitor> _monitor;
bool _cancel;
bool _running;
public:... |
2333e8630ee22f9890246c32c0a0e88f3e705e9acdf624ced82796c2f8e6f8ac | C/C++ | 879 | 33 | #ifndef PRPACK_IGRAPH_GRAPH
#define PRPACK_IGRAPH_GRAPH
#ifdef PRPACK_IGRAPH_SUPPORT
#include "prpack_base_graph.h"
#include "igraph_datatype.h"
#include "igraph_vector.h"
namespace prpack {
class prpack_igraph_graph : public prpack_base_graph {
public:
// constructors
prpack_igraph_graph()... |
1f1775ceee854e1d11e85de3e9020678e37f530368022b93bb5a687d3a499ef6 | C/C++ | 893 | 23 | #include <infomap/Network.h>
#include <igraph_interface.h>
namespace infomap
{
/**
* Copy an igraph network to an Infomap network
*
* @param network The Infomap network destination
* @param graph The igraph network source
* e_weights: Numeric vector giving the weights of the edges. If it is a NULL pointer then a... |
25a6b9095702a1e400e82ff8417e2ab80d15edcdb8cb836027b247ff1e2d0a1e | C/C++ | 893 | 32 | /*
igraph library.
Copyright (C) 2020 The igraph development team
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,... |
2432af45a4763dda8af689c757df505d61e1e268e6f6fc650ce47c4d99f2db07 | C/C++ | 903 | 32 | #ifndef METRICS_H_
#define METRICS_H_
#include <algorithm> // generate
#include <vector> // vector
#include <iterator> // begin, end, and ostream_iterator
#include <iostream> // cout
#include <iomanip>
#include <map>
#include <utility>
#include <set>
#include <stdlib.h>
#include <cstdlib>
#include <string>
#in... |
3c2bb29022b6b739dbe46dc1b7eba1b6ba911fba345a7ef5521479ecd9f93a09 | C/C++ | 910 | 43 | #ifndef MINIMAP_H
#define MINIMAP_H
#include <QWidget>
#include <QPointer>
class QPixmap;
class TileManager;
class MiniMap : public QWidget {
Q_OBJECT
public:
MiniMap(const QPixmap& overview, QWidget *parent);
QSize sizeHint() const;
int heightForWidth(int w) const;
void setTileManager(T... |
d4e7a0c2ddef7150d28950dfb9c01dfdaec116d9e30197033287d3f7a8c50fca | C/C++ | 917 | 48 | /*
* BipartiteClusterReader.h
*
* Created on: 25 maj 2015
* Author: Daniel
*/
#ifndef SRC_IO_BIPARTITECLUSTERREADER_H_
#define SRC_IO_BIPARTITECLUSTERREADER_H_
#include "ClusterReader.h"
#ifdef NS_INFOMAP
namespace infomap
{
#endif
class BipartiteClusterReader : public ClusterReader {
public:
BipartiteC... |
ad218967bf06c38419fe39d929b0b38e650be2ef59c1fa14e008bfed43984350 | C/C++ | 919 | 34 | #ifndef _DistanceTransformWholeSlideFilter
#define _DistanceTransformWholeSlideFilter
#include "wholeslidefilters_export.h"
#include <string>
#include <vector>
#include <memory>
class MultiResolutionImage;
class ProgressMonitor;
class WHOLESLIDEFILTERS_EXPORT DistanceTransformWholeSlideFilter {
private... |
fcd1de96a2be20873ecdbbe9b7fcaa0de84ca3b2dcb97063f2ab67a453d54ee0 | C/C++ | 925 | 29 | #ifndef BoxH
#define BoxH
#include <vector>
#include "core_export.h"
class CORE_EXPORT Box {
private :
std::vector<unsigned long long> _start;
std::vector<unsigned long long> _size;
public :
Box intersection(const Box& r) const;
bool intersects(const Box& r) const;
Box();
Box(const ... |
4914ab4efe46759831c4d5fe6fa47c1cc83fbe43428a1faf132336c6de1f0491 | C/C++ | 934 | 28 | /*
igraph library.
Copyright (C) 2013-2025 The igraph development team <igraph@igraph.org>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at y... |
c8559f8c92215354e21345985a50fa8b9ad519226928919eef51a11dd5d5e451 | C/C++ | 942 | 32 | /*******************************************************************************
Infomap software package for multi-level network clustering
Copyright (c) 2013, 2014 Daniel Edler, Anton Holmgren, Martin Rosvall
This file is part of the Infomap software package.
See file LICENSE_GPLv3.txt for full license details.
... |
0fbf88adc01d195a243757e3aa1188cab59327fa6d27598cfe51b88d4773e05b | C/C++ | 945 | 31 | /*
igraph library.
Copyright (C) 2003-2025 The igraph development team <igraph@igraph.org>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at y... |
dc7576e58786807f6bff111bcef94db4b02ed647997f08edfee9c265649d1dc1 | C/C++ | 955 | 33 | #ifndef PRPACK_PREPROCESSED_SCHUR_GRAPH
#define PRPACK_PREPROCESSED_SCHUR_GRAPH
#include "prpack_preprocessed_graph.h"
#include "prpack_base_graph.h"
namespace prpack {
class prpack_preprocessed_schur_graph : public prpack_preprocessed_graph {
private:
// helper methods
void initia... |
377ec0e2597204e0ba7d4bdf4910241a61b217134f68154ab51724929c826aeb | C/C++ | 958 | 38 | #ifndef _DICOMImage
#define _DICOMImage
#include "MultiResolutionImage.h"
#include "dicomfileformat_export.h"
#include <vector>
#include <map>
class WSIDicomInstance;
class DICOMFILEFORMAT_EXPORT DICOMImage : public MultiResolutionImage {
public:
DICOMImage();
~DICOMImage();
bool initializeTy... |
a2ffff01ec36fdb0c89691e0187bb15cda8e94a253dda42f7c48c85dab650977 | C/C++ | 965 | 50 | #ifndef __ASAP_GUI_EXTERNALSOURCEDIALOG__
#define __ASAP_GUI_EXTERNALSOURCEDIALOG__
#include <QDialog>
class QLabel;
class QLineEdit;
class QCheckBox;
class QDialogButtonBox;
class QGridLayout;
namespace ASAP
{
class ExternalSourceDialog : public QDialog
{
Q_OBJECT
public:
struct SourceDia... |
12fd5b4820e47d503f0c1e528b7123bb48c0681a608604fcb1d74093ef009c9b | C/C++ | 967 | 28 | /* plfit_version.h
*
* Copyright (C) 2021 Tamas Nepusz
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 2 of the License, or (at
* your option) any later version.
*
* Th... |
c1a7fffed21b8dd67786f1169e0ffe9f50fc1d2e45f663a183b28bc56c6128c4 | C/C++ | 968 | 42 | #ifndef __ASAP_GUI_ICONCREATOR__
#define __ASAP_GUI_ICONCREATOR__
#include <mutex>
#include <string>
#include <vector>
#include <QObject>
#include <QStandardItemModel>
#include "ThumbnailCache.h"
namespace ASAP
{
/// <summary>
/// Creates thumbnail icons based on WSIs readable by the multiresolution ... |
80891e89047f0540551ec180e97cb2575f8459b99a59bd133799d9820adda04c | C/C++ | 972 | 33 | #ifndef PRPACK_UTILS
#define PRPACK_UTILS
#ifdef MATLAB_MEX_FILE
#include "mex.h"
#endif
#include <string>
// Computes the time taken to do X and stores it in T.
#define TIME(T, X) \
(T) = prpack_utils::get_time(); \
(X); \
(T) = prpack_utils::get_time() - (T)
/... |
bd25e7c73ce2dbe613f44fd948fa2d88e4bfca6b734c3b07a48b248d8b65f48d | C/C++ | 972 | 32 | #ifndef WSITileGraphicsItemCache_H
#define WSITileGraphicsItemCache_H
#include "multiresolutionimageinterface/TileCache.h"
#include <QObject>
class WSITileGraphicsItem;
class WSITileGraphicsItemCache : public QObject, public TileCache<WSITileGraphicsItem* > {
Q_OBJECT
public :
~WSITileGraphicsItemC... |
0c5c1471ef6a0c371a9142aa6ef45ba348b38d9b945c338b21725f42672ad4b1 | C/C++ | 979 | 42 | /*
* Author: Akatsuki Kimura <akkimura@nig.ac.jp>
* Akira Funahashi <funa@bio.keio.ac.jp>
* Last modified: Thu, 25 Jul 2013 02:06:24 +0900
*/
#ifndef __mtglobal__
#define __mtglobal__
/* parameters used in main(), function_* and draw_graphs() */
typedef struct _mtGlobal {
int N; /* the (maximum) number ... |
2b5ec926a8408a6b35234b3980f866d73f1219fd5cc49a1d2452854d15fb53d7 | C/C++ | 980 | 26 |
#ifndef CLIQUER_REORDER_H
#define CLIQUER_REORDER_H
#include "set.h"
#include "graph.h"
extern void reorder_set(set_t s,int *order);
extern void reorder_graph(graph_t *g, int *order);
extern int *reorder_duplicate(int *order,int n);
extern void reorder_invert(int *order,int n);
extern void reorder_reverse(int *order... |
002cd548e29f7cac2014ad1e9c2a9a94b5657392512af96c7c4e8ca3cf1feba9 | C/C++ | 995 | 59 |
#ifndef CLIQUER_MISC_H
#define CLIQUER_MISC_H
#include "igraph_error.h"
#include "cliquerconf.h"
/*
* We #define boolean instead of using a typedef because nauty.h uses it
* also. AFAIK, there is no way to check for an existing typedef, and
* re-typedefing is illegal (even when using exactly the same datatype!).... |
aba46fbfb848dc7175be47c38306dc7ba76716a4ae533d1b69402eff91df7e90 | C/C++ | 1,001 | 26 | /*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you ... |
4d35a1a9f20ec31a6f7738996e3b19d6b2c775e81d8b8bb0daeeff43497c3ca3 | C/C++ | 1,018 | 32 | /*
igraph library.
Copyright (C) 2021 The igraph development team <igraph@igraph.org>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your o... |
d33aa25cc948b77c5618c1f21684cb846fe809c4a53e4b957e04abe81848e44f | C/C++ | 1,018 | 39 | #ifndef _ArithmeticWholeSlideFilter
#define _ArithmeticWholeSlideFilter
#include "wholeslidefilters_export.h"
#include <string>
#include <vector>
#include <map>
#include <memory>
class MultiResolutionImage;
class ProgressMonitor;
class WHOLESLIDEFILTERS_EXPORT ArithmeticWholeSlideFilter {
private:
... |
3ca441f3db81ae4d9151d215310744cc642704e767f9c0d852337b294dcc9822 | C/C++ | 1,026 | 37 | #ifndef _LabelStatisticsWholeSlideFilter
#define _LabelStatisticsWholeSlideFilter
#include "wholeslidefilters_export.h"
#include <string>
#include <vector>
#include <map>
#include <memory>
class MultiResolutionImage;
class ProgressMonitor;
class WHOLESLIDEFILTERS_EXPORT LabelStatisticsWholeSlideFilter {
... |
69184bc98dc468cf31d2160ffd242a70531fa36110f2902f8c1d97fb3b269666 | C/C++ | 1,033 | 43 | #ifndef _OpenSlideImage
#define _OpenSlideImage
#include "MultiResolutionImage.h"
#include "openslidefileformat_export.h"
struct _openslide;
typedef struct _openslide openslide_t;
class OPENSLIDEFILEFORMAT_EXPORT OpenSlideImage : public MultiResolutionImage {
public:
OpenSlideImage();
~OpenSlideI... |
14955d85e031dcb67930df70b1bd8d8b067da989d9f17985fff20208e74623c2 | C/C++ | 1,037 | 44 | /*
* Author: Akatsuki Kimura <akkimura@nig.ac.jp>
* Akira Funahashi <funa@bio.keio.ac.jp>
* Last modified: Thu, 25 Jul 2013 02:06:24 +0900
*/
#ifndef __mtglobal__
#define __mtglobal__
/* parameters used in main(), function_* and draw_graphs() */
typedef struct _mtGlobal {
int N; /* the (maximum) number ... |
0a77210ecb097b51467960c139d016d9d599716cf9dc45b0c6c242b5b56e0547 | C/C++ | 1,045 | 44 | // Copyright (c) 2021 PaddlePaddle Authors. All Rights Reserved.
//
// Licensed under the Apache License, Version 2.0 (the "License");
// you may not use this file except in compliance with the License.
// You may obtain a copy of the License at
//
// http://www.apache.org/licenses/LICENSE-2.0
//
// Unless requir... |
fbb2fe67350e5bfc69279bd2550e6ea7767b0129ea399e6994aa960c62d78ebf | C/C++ | 1,047 | 41 | #ifndef _ColorDeconvolutionFilterPluginH
#define _ColorDeconvolutionFilterPluginH
#include "interfaces/interfaces.h"
template <class inType>
class ColorDeconvolutionFilter;
class QDialog;
class ColorDeconvolutionFilterPlugin : public ImageFilterPluginInterface
{
Q_OBJECT
Q_PLUGIN_METADATA(IID "... |
327ee6773e268c4439483c497716134c8315ef1d1510fdb6276af1887917a395 | C/C++ | 1,056 | 43 | #ifndef _NucleiDetectionFilterPluginH
#define _NucleiDetectionFilterPluginH
#include "interfaces/interfaces.h"
template <class inType>
class NucleiDetectionFilter;
class QDialog;
class NucleiDetectionFilterPlugin : public ImageFilterPluginInterface
{
Q_OBJECT
Q_PLUGIN_METADATA(IID "ASAP.Nuclei... |
f26eda900144655bfb8683e1c3718a3a9200bda7a6ce9154de78b92fa736b132 | C/C++ | 1,074 | 41 | /*<html><pre> -<a href="qh-geom_r.htm"
>-------------------------------</a><a name="TOP">-</a>
random_r.h
header file for random and utility routines
see qh-geom_r.htm and random_r.c
Copyright (c) 1993-2020 The Geometry Center.
$Id: //main/2019/qhull/src/libqhull_r/rando... |
26ce2fbaf80280da882cafecdabd7977906371612fc80f5d43dbe2a16c6625a2 | C/C++ | 1,084 | 39 | #ifndef MEASUREMENTANNOTATIONTOOL_H
#define MEASUREMENTANNOTATIONTOOL_H
#include "AnnotationTool.h"
#include "core/Point.h"
#include <QGraphicsTextItem>
class AnnotationWorkstationExtensionPlugin;
class PathologyViewer;
class QGraphicsLineItem;
class ANNOTATIONPLUGIN_EXPORT MeasurementAnnotationTool : pub... |
928189fc7ec33ddf5a7537f7cd28273c278f79f02efa9cb7cab37be9526a9aab | C/C++ | 1,084 | 41 | #ifndef _VSIImage
#define _VSIImage
#include <vector>
#include "MultiResolutionImage.h"
#include "multiresolutionimageinterface_export.h"
class MULTIRESOLUTIONIMAGEINTERFACE_EXPORT VSIImage : public MultiResolutionImage {
public:
VSIImage();
~VSIImage();
bool initializeType(const std::string& ima... |
6d0517e1f2cbe0b600077ed7e9587280b13708dce746d9c3890b6d09a7861c5c | C/C++ | 1,087 | 34 | /* kolmogorov.h
*
* Copyright (C) 2010-2011 Tamas Nepusz
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 2 of the License, or (at
* your option) any later version.
*
* ... |
d59e7875ece087ce15a031e46b3c6a4f2627d062b9ed911f06b5df450205d180 | C/C++ | 1,091 | 42 | /*
* Author: Akatsuki Kimura <akkimura@nig.ac.jp>
* Akira Funahashi <funa@bio.keio.ac.jp>
* Last modified: Thu, 25 Jul 2013 02:06:24 +0900
*/
#ifndef __mtglobal__
#define __mtglobal__
/* parameters used in main(), function_* and draw_graphs() */
typedef struct _mtGlobal {
int N; /* the (maximum) number ... |
907e2b363c2f640747fbb21127d2e18339b2bef7d486de07f4eaabd28c59c789 | C/C++ | 1,098 | 33 | /*
igraph library.
Copyright (C) 2011-2021 The igraph development team <igraph@igraph.org>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at y... |
a78e9b6bce41b29d16e8e4bdb2ec6784b8474df72dfd3d4358563214b4af1a84 | C/C++ | 1,098 | 35 | #ifndef ANNOTATIONTOMASK_H
#define ANNOTATIONTOMASK_H
#include <string>
#include <vector>
#include <map>
#include <memory>
#include "annotation_export.h"
#include "core/Point.h"
class AnnotationList;
class ProgressMonitor;
class ANNOTATION_EXPORT AnnotationToMask {
public :
void convert(const st... |
167c8c718c5881590b28b32618df708aeee355ebc5cecce58a08fcccb1230b6f | C/C++ | 1,105 | 37 | /**
* Copyright (c) 2020 CCS/GMRV/URJC/UPM.
*
* Authors: Juan P. Brito <juanpedro.brito@upm.es>
* Juan Jose Garcia Cantero <juanjose.garcia@urjc.es>
*
* This library is free software; you can redistribute it and/or modify it under
* the terms of the GNU Lesser General Public License version 3.0 a... |
d66c754ca83012931e631648e3594144e061dac97cfa8085b74e1b5df0b0a428 | C/C++ | 1,105 | 35 | /*
igraph library.
Copyright (C) 2022 The igraph development team <igraph@igraph.org>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your o... |
2ef5c5e42347c32b9dff8a9cff97dc081f8c18794631676f71c91b1e11321467 | C/C++ | 1,108 | 34 | /*
igraph library.
Copyright (C) 2025 The igraph development team <igraph@igraph.org>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your o... |
b7ab158b72a5e3bd86340800d0fdb1b8dcec3a47259fb327023fb9f3248db20c | C/C++ | 1,110 | 35 | /*
igraph library.
Copyright (C) 2014-2025 The igraph development team <igraph@igraph.org>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at y... |
0ea297c846cdd189d6072e84295fb3b99e50aa021f85d483ddbba5d618eccdf7 | C/C++ | 1,111 | 41 | #ifndef ANNOTATIONTOOL_H
#define ANNOTATIONTOOL_H
#include "interfaces/interfaces.h"
#include "core/Point.h"
#include "annotationplugin_export.h"
class AnnotationWorkstationExtensionPlugin;
class PathologyViewer;
class ANNOTATIONPLUGIN_EXPORT AnnotationTool : public ToolPluginInterface {
Q_OBJECT
pu... |
6a7fb473130a70f8120f62c5d9eddbe193c0033aff7eedc46e3be70bdc5d8eb7 | C/C++ | 1,111 | 35 | /*
igraph library.
Copyright (C) 2021-2025 The igraph development team <igraph@igraph.org>
This program is free software; you can redistribute it and/or modify it under
the terms of the GNU General Public License as published by the Free Software
Foundation; either version 2 of the License, or (at your optio... |
57578a354a88b0fa26440b80c6cd36a999aa6a35399b282a9c4e305602f75a23 | C/C++ | 1,113 | 27 | //---------------------------------------------------------------------------
#ifndef _AperioSVSWriter
#define _AperioSVSWriter
#include "multiresolutionimageinterface_export.h"
#include "MultiResolutionImageWriter.h"
#include <string>
#include <vector>
//! This class can be used to write images to disk in a... |
2c61a2e4e262bdd01fa79344f2214a0a05766af41e2609cd452d8d054ac2f7c2 | C/C++ | 1,126 | 47 | /*******************************************************************************
Infomap software package for multi-level network clustering
Copyright (c) 2013, 2014 Daniel Edler, Anton Holmgren, Martin Rosvall
This file is part of the Infomap software package.
See file LICENSE_GPLv3.txt for full license details.
... |
329a02f50d04e6c3835432b7a1097e8ce999dc706a88cd0c7fa957daba05f080 | C/C++ | 1,135 | 35 | /* plfit_decls.h
*
* Copyright (C) 2024 Tamas Nepusz
*
* This program is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 2 of the License, or (at
* your option) any later version.
*
* This... |
d0ad794c6aa175d755865b9031c148965df143d70bf0ddaa86fac0ec73077f10 | C/C++ | 1,139 | 47 | /* Custom ctype.h to overcome trouble with recent versions of Linux libc.a */
#ifdef NO_My_ctype
#include <ctype.h>
#else /*{*/
#ifndef My_ctype_DEF
extern char My_ctype[];
#else /*{*/
char My_ctype[264] = {
0, 0, 0, 0, 0, 0, 0, 0,
0, 0, 0, 0, 0, 0, 0, 0,
0, 2, 2, 2, 2, 2, 0, 0,
0, 0, 0, 0, 0, 0, 0, 0,
0, 0, 0, ... |
c3bc394e569c4459c23e4aa52c2eab17ef087c96972163c20cbf4dc5214ee87f | C/C++ | 1,149 | 54 | #ifndef FILTERTHREAD_H
#define FILTERTHREAD_H
#include <QThread>
#include <QMutex>
#include <QWaitCondition>
#include <QRect>
#include <QImage>
#include <vector>
#include <memory>
class MultiResolutionImage;
class ImageFilterPluginInterface;
class QGraphicsItem;
class FilterThread : public QThread
{
... |
2aaeb0f129ceceedf7f473e331f56c9689c88524c6a7b942d1c1607dc94be072 | C/C++ | 1,154 | 39 | #ifndef PRPACK_PREPROCESSED_SCC_GRAPH
#define PRPACK_PREPROCESSED_SCC_GRAPH
#include "prpack_preprocessed_graph.h"
#include "prpack_base_graph.h"
namespace prpack {
// Pre-processed graph class
class prpack_preprocessed_scc_graph : public prpack_preprocessed_graph {
private:
// helper meth... |
ae196596ae180f2b0284b5df8c92386a6d3365d9780276a87f22f90ffe5cb011 | C/C++ | 1,155 | 39 | // Copyright (c) 2021 PaddlePaddle Authors. All Rights Reserved.
//
// Licensed under the Apache License, Version 2.0 (the "License");
// you may not use this file except in compliance with the License.
// You may obtain a copy of the License at
//
// http://www.apache.org/licenses/LICENSE-2.0
//
// Unless requir... |
5c8d584a51287144e885628f3e8bd126c9735db6602b955d1af022cb151a1853 | C/C++ | 1,163 | 43 | #ifdef UN_EXTERN
#define GLOB
#else
#define GLOB extern
#endif
/* function prototypes */
int re_v(int nsam); /* function that performs recombination, taking into account
recombinational hotspots */
int cinr_V(int nsam, int nsite);
int cleftr_V(int nsam);
int crightr_V(int nsam);
/*void fprint_coal_time... |
7e75dfff629c324f66966f23ebce8ff2e234a9173a5581e3f75d2fc66ec25e86 | C/C++ | 1,171 | 36 | /*
igraph library.
Copyright (C) 2011-2012 Gabor Csardi <csardi@rmki.kfki.hu>
334 Harvard street, Cambridge MA, 02139 USA
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either ver... |
af4c060624b2e7e5ad92c779d832f4a5ffd6634cc3d69b5613c94aa6c2055671 | C/C++ | 1,175 | 34 | /*
igraph library.
Copyright (C) 2025 The igraph development team <igraph@igraph.org>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your o... |
3a858a6fb7fa73ff98f58196ba1e7ac555541bc4a3cd96f600faaab8281b3e86 | C/C++ | 1,177 | 54 | #ifndef FILTERTHREAD_H
#define FILTERTHREAD_H
#include <QThread>
#include <QMutex>
#include <QWaitCondition>
#include <QRect>
#include <QImage>
#include <vector>
#include <memory>
class MultiResolutionImage;
class ImageFilterPluginInterface;
class QGraphicsItem;
class FilterThread : public QThread
{
... |
3c5c9a475ed85b737165d5c2602614361decf17b908792e91d5996c32a71d72d | C/C++ | 1,178 | 31 | /* rgr.h (raster graphics) */
/***********************************************************************
* This code is part of GLPK (GNU Linear Programming Kit).
* Copyright (C) 2004-2018 Free Software Foundation, Inc.
* Written by Andrew Makhorin <mao@gnu.org>.
*
* GLPK is free software: you can redistribute it an... |
2a956586d2c91758109ef2b1c49d5a9f0f74c2d121206bdc0da2fa4e6cc15033 | C/C++ | 1,189 | 35 | //
// Created by Miguel Monteiro on 29/01/2018.
//
#include "../src/PermutohedralLatticeCPU.h"
#include "memory"
//for the case where the image is its own reference image
template<typename T>
static void bilateral_filter_cpu(T *input,
int n_input_channels,
... |
3686310883989267fa392a7dbd22cca12b5c48c1a934ce263ade765aeacabb76 | C/C++ | 1,194 | 33 | /* glpipm.h (primal-dual interior-point method) */
/***********************************************************************
* This code is part of GLPK (GNU Linear Programming Kit).
* Copyright (C) 2000-2013 Free Software Foundation, Inc.
* Written by Andrew Makhorin <mao@gnu.org>.
*
* GLPK is free software: you c... |
6da49d42a027b7d6f55ddff38671b0a369bafed7869eeecbf7622db7ff7267ca | C/C++ | 1,197 | 32 | /* mc13d.h */
/***********************************************************************
* This code is part of GLPK (GNU Linear Programming Kit).
* Copyright (C) 2009-2013 Free Software Foundation, Inc.
* Written by Andrew Makhorin <mao@gnu.org>.
*
* GLPK is free software: you can redistribute it and/or modify it
*... |
be48eff1c6277e9f937b801dbfd9bfafc04829813ff1b0af302e91e3287949fe | C/C++ | 1,198 | 37 | /*
igraph library.
Copyright (C) 2011-2012 Gabor Csardi <csardi@rmki.kfki.hu>
334 Harvard street, Cambridge MA, 02139 USA
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either ver... |
a8541302deaa4cf9815c67fcb1a140070b6483b3ed0018a5315ad069c095bf29 | C/C++ | 1,200 | 32 | /* proxy.h (proximity search heuristic algorithm) */
/***********************************************************************
* This code is part of GLPK (GNU Linear Programming Kit).
* Copyright (C) 2013 Free Software Foundation, Inc.
* Written by Giorgio Sartor <0gioker0@gmail.com>.
*
* GLPK is free software: yo... |
c52451e48c8c35f0d1638dfad21c9a4a4c7a1574aabb4b2cd491496271d01c11 | C/C++ | 1,200 | 37 | /*
igraph library.
Copyright (C) 2007-2012 Gabor Csardi <csardi.gabor@gmail.com>
334 Harvard street, Cambridge, MA 02139 USA
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either ... |
db0f9b22d4d832deb59eb84d4cb0cf79114413d9eed17e53d36c13cb8fb4658d | C/C++ | 1,201 | 32 | /* ffalg.h (Ford-Fulkerson algorithm) */
/***********************************************************************
* This code is part of GLPK (GNU Linear Programming Kit).
* Copyright (C) 2009-2013 Free Software Foundation, Inc.
* Written by Andrew Makhorin <mao@gnu.org>.
*
* GLPK is free software: you can redistr... |
2b29989df2868612751fe3232f550cc12f1b722aa40ef2702e9c65e6dad24d05 | C/C++ | 1,204 | 31 | /* wclique.h (maximum weight clique, Ostergard's algorithm) */
/***********************************************************************
* This code is part of GLPK (GNU Linear Programming Kit).
* Copyright (C) 2009 Free Software Foundation, Inc.
* Written by Andrew Makhorin <mao@gnu.org>.
*
* GLPK is free software... |
428f68b859ad161bbcc7a5c7ee3e04029484895177f5bfc6b95ceb1e9b06973b | C/C++ | 1,206 | 43 | #ifndef RECTANGLEANNOTATIONTOOL_H
#define RECTANGLEANNOTATIONTOOL_H
#include "AnnotationTool.h"
#include "core/Point.h"
#include <string>
#include <QGraphicsTextItem>
#include <QGraphicsRectItem>
class AnnotationWorkstationExtensionPlugin;
class PathologyViewer;
class QGraphicsRectItem;
class ANNOTATION... |
787fcc4a3d8f083e5716db16b6ef49682540851795755fa401059e38cca31684 | C/C++ | 1,206 | 34 | /*
igraph library.
Copyright (C) 2022 The igraph development team <igraph@igraph.org>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your o... |
42e5c503322ef7cd0d3ca9189d5b3e375b86568399245050e5d9200a08065708 | C/C++ | 1,208 | 35 | /*
igraph library.
Copyright (C) 2011-2025 The igraph development team <igraph@igraph.org>
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at y... |
e7fc4f8dd211d1e6b3d5f667526348602c4ffba7455db7a604f093733d508041 | C/C++ | 1,208 | 41 | //
// Created by Miguel Monteiro on 25/01/2018.
//
#define cimg_display 0
#include "CImg.h"
template<typename T> T* get_flat_float_from_image(cimg_library::CImg<unsigned char> image, T pixel_depth=255.0){
//dim0 = y dim1=x
auto flat = new T[image.width() * image.height() * 3];
int idx{0};
for(int y=0... |
2cf44805d5ba4ceb3d7950a4acc1a527b1dc41ba7934a132e35bd1fc7778bee3 | C/C++ | 1,210 | 48 | #ifndef ANNOTATIONBASE_H
#define ANNOTATIONBASE_H
#include <string>
#include <vector>
#include <map>
#include <memory>
#include "core/Point.h"
#include "annotation_export.h"
class AnnotationGroup;
#ifndef SWIG
class ANNOTATION_EXPORT AnnotationBase : public std::enable_shared_from_this<AnnotationBase> {... |
878ed92bcbf1c7faff48ee56f7f2bd0a28b2d273607ea34e7b150f929e6f74db | C/C++ | 1,210 | 41 | // Copyright (c) 2021 PaddlePaddle Authors. All Rights Reserved.
//
// Licensed under the Apache License, Version 2.0 (the "License");
// you may not use this file except in compliance with the License.
// You may obtain a copy of the License at
//
// http://www.apache.org/licenses/LICENSE-2.0
//
// Unless requir... |
6caee65ffaced1f2b0d0cd31cd058f9e866e8f4f7e1926753766ec4fe923a63e | C/C++ | 1,223 | 33 | /* okalg.h (out-of-kilter algorithm) */
/***********************************************************************
* This code is part of GLPK (GNU Linear Programming Kit).
* Copyright (C) 2009-2013 Free Software Foundation, Inc.
* Written by Andrew Makhorin <mao@gnu.org>.
*
* GLPK is free software: you can redistri... |
1baa97c701d156d35706e14ed88c2d98549e02c3ebd9afeaa5ae3b766750bdec | C/C++ | 1,225 | 30 | /* jd.h (conversions between calendar date and Julian day number) */
/***********************************************************************
* This code is part of GLPK (GNU Linear Programming Kit).
* Copyright (C) 2000 Free Software Foundation, Inc.
* Written by Andrew Makhorin <mao@gnu.org>.
*
* GLPK is free so... |
05f33004168223053d15a7ede61e79e0fc2ccdb4eecbd9199621f286434f034b | C/C++ | 1,226 | 32 | /* mt1.h (0-1 knapsack problem; Martello & Toth algorithm) */
/***********************************************************************
* This code is part of GLPK (GNU Linear Programming Kit).
* Copyright (C) 2017-2018 Free Software Foundation, Inc.
* Written by Andrew Makhorin <mao@gnu.org>.
*
* GLPK is free soft... |
e16b1a4be2dd82d0fff8b6261779a10076cd5b88e9866e69f76206e4f17e7e8c | C/C++ | 1,226 | 60 | struct devent {
double time;
int popi;
int popj;
double paramv;
int num ; /* adna */
double **mat ;
char detype ;
struct devent *nextde;
} ;
struct c_params {
int npop;
int nsam; /* total sample size including ancient samples */
int nsamin; /* sample size at present time, does not include ancient ... |
e8982e321a837416daf927620538a4b4094f8492e81d85d2a14e2f26e8ae8e60 | C/C++ | 1,231 | 32 | /* mc21a.h (permutations for zero-free diagonal) */
/***********************************************************************
* This code is part of GLPK (GNU Linear Programming Kit).
* Copyright (C) 2009-2013 Free Software Foundation, Inc.
* Written by Andrew Makhorin <mao@gnu.org>.
*
* GLPK is free software: you ... |
6ff270b5c5a7980c3c7fb83bdafd04da902bba561a664ae49edcd2459310334f | C/C++ | 1,239 | 48 | #ifndef _ThresholdWholeSlideFilter
#define _ThresholdWholeSlideFilter
#include "wholeslidefilters_export.h"
#include <string>
#include <vector>
#include <map>
#include <memory>
class MultiResolutionImage;
class ProgressMonitor;
class WHOLESLIDEFILTERS_EXPORT ThresholdWholeSlideFilter {
private:
std... |
774ec16a04818fe04ed952139c5b8ea8968c90bdd2b4e818d456b234924a81aa | C/C++ | 1,239 | 36 | /*******************************************************************************
Infomap software package for multi-level network clustering
Copyright (c) 2013, 2014 Daniel Edler, Anton Holmgren, Martin Rosvall
This file is part of the Infomap software package.
See file LICENSE_GPLv3.txt for full license details.
... |
07b286c8c5015ca8a1df5d272339cebc180f1ae77ddd7c8b777575f293fdc442 | C/C++ | 1,242 | 32 | /* wclique1.h (maximum weight clique, greedy heuristic) */
/***********************************************************************
* This code is part of GLPK (GNU Linear Programming Kit).
* Copyright (C) 2012-2013 Free Software Foundation, Inc.
* Written by Andrew Makhorin <mao@gnu.org>.
*
* GLPK is free softwar... |
70f8b4e34905730bc974039c34fa24a1f5a182acd64b5d073a749d56cb1dd0d1 | C/C++ | 1,242 | 49 | /**
* Copyright (c) 2020 CCS/GMRV/URJC/UPM.
*
* Authors: Juan P. Brito <juanpedro.brito@upm.es>
* Juan Jose Garcia Cantero <juanjose.garcia@urjc.es>
*
* This library is free software; you can redistribute it and/or modify it under
* the terms of the GNU Lesser General Public License version 3.0 as publi... |
75d44d33685d1e9dd5353142e55627e8ab152e566f40d474f21915ae7603aec4 | C/C++ | 1,244 | 32 | /* keller.h (cover edges by cliques, Kellerman's heuristic) */
/***********************************************************************
* This code is part of GLPK (GNU Linear Programming Kit).
* Copyright (C) 2009-2013 Free Software Foundation, Inc.
* Written by Andrew Makhorin <mao@gnu.org>.
*
* GLPK is free sof... |
0849ec01abe0c7b5aeefe99f491d1b1ba47e0534aad02519c581ac687c93143b | C/C++ | 1,252 | 42 | /**********************************************************************************
Infomap software package for multi-level network clustering
Copyright (c) 2013, 2014 Daniel Edler, Martin Rosvall
For more information, see <http://www.mapequation.org>
This file is part of Infomap software package.
Infomap... |
adb4392f31a4cf0f843ecd8b044b0c6e235281ee45953dd1198dc167a1a3431a | C/C++ | 1,252 | 70 | #ifndef SYSDEP_H_INCLUDED
#define SYSDEP_H_INCLUDED
#undef USE_LARGEFILE
#ifndef NO_LONG_LONG
#ifdef __sun__
#define USE_LARGEFILE
#define OFF_T off64_t
#endif
#ifdef __linux__
#define USE_LARGEFILE
#ifdef __GLIBC__
#define OFF_T __off64_t
#else
#define OFF_T off_t
#endif
#endif
#ifdef _AIX43
#define _LARGE_FILES
#d... |
8d4f686d6486ad137648ecd3105952d8686ef6e52df278f8724dcb3235edf339 | C/C++ | 1,253 | 45 | /*******************************************************************************
Infomap software package for multi-level network clustering
Copyright (c) 2013, 2014 Daniel Edler, Anton Holmgren, Martin Rosvall
This file is part of the Infomap software package.
See file LICENSE_GPLv3.txt for full license details.
... |
cb4254e83fea40ffff8330630a3d6703dac3d5bd6f79de36702076ab98baf692 | C/C++ | 1,265 | 37 | /* simplex.h */
/***********************************************************************
* This code is part of GLPK (GNU Linear Programming Kit).
* Copyright (C) 2015 Free Software Foundation, Inc.
* Written by Andrew Makhorin <mao@gnu.org>.
*
* GLPK is free software: you can redistribute it and/or modify it
* u... |
d65eb35e727f2999b3f83f910b3f038b7d71ae683cdc0d895fcd85efd0e7c4db | C/C++ | 1,268 | 32 | /* triang.h (find maximal triangular part of rectangular matrix) */
/***********************************************************************
* This code is part of GLPK (GNU Linear Programming Kit).
* Copyright (C) 2012-2013 Free Software Foundation, Inc.
* Written by Andrew Makhorin <mao@gnu.org>.
*
* GLPK is fre... |
Subsets and Splits
No community queries yet
The top public SQL queries from the community will appear here once available.