sha256 stringlengths 64 64 | language stringclasses 28
values | size int32 1 491k | lines int32 1 23.2k | content stringlengths 1 200k |
|---|---|---|---|---|
b5d5d446e985491d177fbeb1e17c3951d583eeb8d9e804af8117bdec795a0e64 | Java | 5,261 | 163 | /**
* Copyright Copyright 2010-17 Simon Andrews
*
* This file is part of FastQC.
*
* FastQC is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or
* ... |
09704ba1d0106429af063a1d9edf8483fccef7dd25c147ca1babd76a9e067703 | Java | 5,340 | 227 | /**
* Copyright Copyright 2010-17 Simon Andrews
*
* This file is part of FastQC.
*
* FastQC is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or
* (at your... |
1747dfd864e06876351e07186b1b2d6ac04ee18d0148267b66ca0d40b7d6c8c2 | Java | 5,357 | 161 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
39f3e9be5e2fefa723e2a9cc6573ba7c9492b41cdd2192f6c5a50375ba4bdc2d | Java | 5,377 | 203 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
9b62d6212575d7d03d44bb15801f171c19dabac25010b9cfef6d4390200da53f | Java | 5,448 | 168 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
bef1f655eb351606577b1e5593c87fcca3da3ab8724a8ad165b3495b0d89b94d | Java | 5,465 | 148 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
ed7c972a48e1332669a5f375591f49b7f36905bf159432d5e604ae706a87cd5f | Java | 5,649 | 159 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
613594b915b02c02af0ca762ab0d78ebb54772555c518d38552887f53a071d73 | Java | 5,697 | 176 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
1f3ba85038eacc0a6e7492a22944600abfdbd0316d48f7827b481f8dddb2d907 | Java | 5,766 | 216 | package topicmodels;
import cc.mallet.types.Alphabet;
import cc.mallet.types.InstanceList;
import cc.mallet.util.CommandOption;
import com.google.common.base.Charsets;
import com.google.common.io.Files;
import java.io.BufferedWriter;
import java.io.File;
import java.io.FileWriter;
import java.io.IOException;
import j... |
f3d7cc863e1c01c608aa55f52ece9c8ad9253bab7d47ba11f1eca84584ef145f | Java | 5,786 | 206 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
8f210af4c57eec64c7696f53594f998d5f3056b83a99bae598bb88d7a2b15bcc | Java | 5,787 | 184 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
2a92aee629c8c9840370efa47bab7ccf5bc84effddd4ff2d1f5522a86b634eac | Java | 5,818 | 222 | /**
* Copyright Copyright 2010-12 Simon Andrews
*
* This file is part of FastQC.
*
* FastQC is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or
* (at your... |
8e743de23ee3f58d990817df06553508d0b8a7b313673a2e972eac1a20ae9df3 | Java | 5,844 | 156 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
d261516efea57e13a51833de8da1cf0f140092953060ea7d023c9c87092a25de | Java | 5,899 | 139 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
94181ac12662f4dae3684a7f559d861b170384801846382a120f020c05f8c90f | Java | 5,913 | 191 | /**
* Copyright Copyright 2010-12 Pierre Lindenbaum
*
* This file is part of FastQC.
*
* FastQC is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or
* (at ... |
8fd4dd3bfea6962e505422450ccf4007345ee2afdf3ace2b0a2c72fa9e6a9eab | Java | 5,926 | 225 | /**
* Copyright Copyright 2010-17 Simon Andrews
*
* This file is part of FastQC.
*
* FastQC is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or
* (at your... |
4a7c11c14d58b2aca3a3a6a604759bb1196695e0afa6f28fae7994907af53034 | Java | 5,964 | 163 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
ca017e4a12ec8f9aadec07a23845f3dcd1290c28e4c656faf9e52fe65de5fa5c | Java | 6,102 | 180 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
b7d5a8bd58b6998f8429af5572e164cb200b40a0fc7eb8b29946c557285a4c08 | Java | 6,133 | 192 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
c759158b0134626ead879689d6b6642a54dfffdb50a3fbcbd25e29246eac3d4a | Java | 6,151 | 180 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
452979d784d53a47db98b1843a85c02e574d8afcaec71539a53f03060ec0a4fe | Java | 6,156 | 168 | /**
* Copyright 2009- 21 Simon Andrews
*
* This file is part of SeqMonk.
*
* SeqMonk is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or
* (at you... |
826027117df5eab2100f2f568b67062112127489ac0d0fbfa8a9d779de9679ca | Java | 6,204 | 162 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
a4bbeda455e578def6103d93405e9d5c49c7f20cb594d64341f342e4eca2d333 | Java | 6,211 | 194 | /**
* Copyright Copyright 2012-17 Simon Andrews
*
* This file is part of FastQC.
*
* FastQC is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or
* (at your... |
1d830e9efb01a704241fb169c150fd4c6b1ab2770e481305901c1448b475620f | Java | 6,224 | 189 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
b7fb2c8e51af4927e29bf1d1a0a3677d89f91702871b3d1c57e1e99a86d43fc6 | Java | 6,305 | 241 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
cec656cd947a9ea104a8a0cd6605f6f4220db2c04cd0f6e2c923c86812dbaf38 | Java | 6,390 | 219 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
f0c4db937165d800732d375483c93a25c6a58534183b6cd9a1d983e047b80f0f | Java | 6,508 | 191 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
eba082cabee83a9531d585ca104099b98ae3bc125e635ed2ea6169f36f62cb1e | Java | 6,548 | 179 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
805f8dc2e1d17b2e03d4f27a245573bce60229d0cb4ead0a58fbe62022c7759a | Java | 6,607 | 219 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
4b8891731b1ac9bca44a4291f96aa28faa2eeaddede4ad48144634175abefb69 | Java | 6,770 | 254 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
97bd9de8a2b779e2413ccf315f8d38aa94fd4de6d8d763fd43e6e51bcdbfbe5d | Java | 6,817 | 212 | /**
* Copyright Copyright 2010-17 Simon Andrews
*
* This file is part of FastQC.
*
* FastQC is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or
* (at your... |
e5ea245e51942391ece85a8cf11f218bca7a3b81e02b58ddfa26cee79ccd01c7 | Java | 6,841 | 226 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
ba8f319b7c46f58ff788095dc9ba90683c46fa40bb0f6c98f6cd73969f920b1b | Java | 6,848 | 217 | /**
* Copyright Copyright 2010-17 Simon Andrews
*
* This file is part of FastQC.
*
* FastQC is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or
* (at your... |
c0a6c956e2f607bbe42af63a7cbc570112fccdf33e1b3a2e899ddf77fae761b4 | Java | 6,900 | 183 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
f01a9f3ebfc7a145631374e519a1d4bf29bc5c6a425e9738105619cd12156f29 | Java | 6,933 | 197 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
11fcd46f401989109d471823c155ad1effb92f46f78545ddc81ddb1d8627408b | Java | 6,980 | 225 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
ad99296bdaeed3ad6a604cc44b69a7e5a52de83c70736ca3ea6d9de3aff0660f | Java | 7,000 | 295 | /**
* Copyright Copyright 2010-17 Simon Andrews
*
* This file is part of FastQC.
*
* FastQC is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or
* (at your... |
c756f851b424fe5a5afd23c808487fc29e2ba7c7831780fc72aedfaabbce39b0 | Java | 7,036 | 253 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
af5f0dedb58d78ea05825631764d4f0e3e4ac76692ed15b9b2c7cbd9189f821c | Java | 7,102 | 160 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
fc4c924814e37801a60eb549f49f3c5d77040540301e6e7fa764fb7795c09d74 | Java | 7,114 | 201 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
a440939240ebebb3a3ad6c5143c46e50056805c90740a3889ec03ce3ce4c69e9 | Java | 7,230 | 232 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
126c7f1211c25b36346e90b8ab5d98bb4419a758931572e78f6556286ae33970 | Java | 7,256 | 268 | /**
* Copyright Copyright 2010-17 Simon Andrews
*
* This file is part of FastQC.
*
* FastQC is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or
* (at your... |
6595237416dd7b3f64425fd48357b521c1ffab7da9247ee03975415821d920bb | Java | 7,276 | 241 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
909c558803c8ddfb9c80ec433527c402a4bb04362f6a84a9f8fa46c182331716 | Java | 7,296 | 284 | /**
* Copyright Copyright 2010-17 Simon Andrews
*
* This file is part of FastQC.
*
* FastQC is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or
* ... |
2e07011466cf188fc1bd9c6074c40b2320cd664b7b6bb0132f744ae98c7ea888 | Java | 7,332 | 235 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
3ea4bf891e8bf9b115ccec6dab9315d89c21bf58f94224dbd85d4412b4fdd5a9 | Java | 7,354 | 265 | /**
* Copyright Copyright 2010-17 Simon Andrews
*
* This file is part of FastQC.
*
* FastQC is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or
* (at your... |
66695bb5f2bd4f829b530cd57ec1ad034ef5e01f263b845c197b8da72e2e2180 | Java | 7,380 | 196 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
d69d373ac69f2813040702f2cff6db3047c14d28d6a06c24ef838b53583bcd09 | Java | 7,452 | 232 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
e985cd48744346ebb8712d1fefd6b4f20c2e3538f130c4792dd87c2cacddf546 | Java | 7,562 | 207 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
fe33e371ebe9864f93e089fafa0b7d95bb05c1470b1d182bca80fab95d33e4c6 | Java | 7,641 | 229 | /**
* Copyright Copyright 2010-17 Simon Andrews
*
* This file is part of FastQC.
*
* FastQC is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or
* ... |
721d86d9d1a120108bc8afd7480aff90fba939f994cb8c8278f448937c02e04a | Java | 7,652 | 200 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
221c17c612c872e3aa253a6494a02abac2bbf6d3f28d0da05654bc3940979484 | Java | 7,679 | 208 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
b5de083b859a1cc5ecd952fd8330f9cbaec7cbba703679125c69165c16f2cfd3 | Java | 7,723 | 186 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
92291dbaeb09ffd5ef446a5ff6b2c36ff27b460e1a4315fbc9cdfbe56c20d790 | Java | 7,724 | 229 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
06e8ac87519cea4294553ca8c5ab3784d79ee819b2615a390f908e850baecf80 | Java | 7,725 | 205 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
9455e5ad39889d891c0c983c14133e176a3da2c0beb7f15b09c176ac3703942c | Java | 7,756 | 229 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
21aa800345b24b13dd8304cede05da8126811ef847f09981eb602bdd784dcc5e | Java | 7,783 | 260 | /**
* Copyright Copyright 2010-17 Simon Andrews
*
* This file is part of FastQC.
*
* FastQC is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or
* ... |
0a913a434bca7a98327c3e16111955fe866d08b4f306ee0b44528063f96d38a3 | Java | 7,933 | 185 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
f2c50147ae39f314d8206cf321b8899a0d7a06910bc8071281dd6ff87d23911c | Java | 8,124 | 329 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
078ed6491ec37764de0d46d6857a68ab350dd024a2d2ddb11cf1cefd394ff920 | Java | 8,327 | 234 | package eval;
import java.io.BufferedReader;
import java.io.BufferedWriter;
import java.io.File;
import java.io.FileReader;
import java.io.FileWriter;
import java.util.ArrayList;
import java.util.HashMap;
import java.util.HashSet;
import java.util.List;
import java.util.Set;
import utility.FuncUtils;
/**
* Implemen... |
6029d2fe3f997504cb976e77a60ba449b29de026917d26eaaef340d03dfdd134 | Java | 8,332 | 238 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
0ecb824ffc512ededa07fb28a423d2933047aeabae889862042fe47e9ba583a9 | Java | 8,337 | 246 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
ca2d21679971fa8cbfa7ac2fd474be647ac276f72ae741bc6a831c585b272ef0 | Java | 8,385 | 229 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
81e43ef57046b6245e1f2fcd5a87b981e222af12fea73a8e7287bf8055a2da5d | Java | 8,386 | 257 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
9df90c7c4cdf46a594d948d411b2faee74fceb599d43f0a9287fd84ace969018 | Java | 8,765 | 318 | /**
* Copyright Copyright 2010-17 Simon Andrews
*
* This file is part of FastQC.
*
* FastQC is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or
* (at your... |
455fd527cab432907c86c46c5eb627f65d61914928bd0420505c6fa27cc19bb5 | Java | 8,979 | 357 | /**
* Copyright Copyright 2010-17 Simon Andrews
*
* This file is part of FastQC.
*
* FastQC is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or
* (at your... |
0727a6a463c6ab85365a35a63016a0f455b953dd01ad99d94f0f8b421e390342 | Java | 8,989 | 275 | /**
* Copyright Copyright 2010-17 Simon Andrews
*
* This file is part of FastQC.
*
* FastQC is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or
* ... |
3f1868416d3826da40ca16e0e7530b9e493c91044667b72e5aaf46fa90448150 | Java | 9,135 | 302 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
44be0d5b8f6e102e1540f9a52a8051ed0380311614c074376211b3565b1d9b77 | Java | 9,240 | 270 | package com.example.rex4;
import android.content.Context;
import android.graphics.Canvas;
import android.graphics.Color;
import android.graphics.Paint;
import android.os.Bundle;
import android.os.Handler;
import android.os.Looper;
import android.os.Message;
import android.util.Log;
import android.view.SurfaceHolder;
... |
4d260f54df35f7358ca34ed6e16aeeb49cf59e8425e882cefb57d46f0854cd55 | Java | 9,374 | 277 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
621de080b6f17259cb317b93938f5177a428efc16c9b989cc9561a0e3434006a | Java | 9,386 | 283 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
119b42edc688074e21ef7fd1a00013a47dc4e6cdc9afbec173b33c86345a1efe | Java | 9,410 | 286 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
bbeae13479af5d235de6bd8a7b6287059d7c6f0162f95c6b574c73eab36973b8 | Java | 9,433 | 261 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
50e5a7e10dee19328a5ff53e0e66f16baf411d92b65eb1a404ea03be43578572 | Java | 9,528 | 266 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
6785ee249a592d34015b6eb31f41d84807669f3af6902b74d027627094ccd65c | Java | 9,659 | 269 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
0b84cdfc3c22c69f1902f3d48c71128240e4f5ea200748764a4c9c6bc39a9dbe | Java | 9,755 | 260 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
b4b44777e8796c1b6659f74214ccf5a4191208a033bfe23ab1cd6fa39c32a802 | Java | 10,172 | 299 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
65578c346e82e0206bfe48267c3c609edc4f7f98790d5136d7959be70b6c924d | Java | 10,582 | 270 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
5aa6a457d32dec982196372aae7670a7eb82c195170b44208adbc1049da5b48e | Java | 10,586 | 335 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
bbc28de1bc013db495fd56ea1fe0ba5c20b8e9eec342d3ef141d6d7af48d9e36 | Java | 10,635 | 382 | /**
* Copyright Copyright 2010-17 Simon Andrews
*
* This file is part of FastQC.
*
* FastQC is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or
* ... |
340456aacd03a40e854d2bec197b92abd427b653e2e4c360a5f7dc4a57615650 | Java | 10,695 | 365 | /**
* Copyright Copyright 2010-17 Simon Andrews
*
* This file is part of FastQC.
*
* FastQC is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or
* ... |
081ac2ff111f31522b90651fb78989f60441b381289363cf48824fbae98c4c1d | Java | 10,956 | 234 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
a3389b8cd45b49e6421419e9ad941b2d1858930ae52cfb86adda1f1eb53d102a | Java | 11,191 | 263 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
62f1e37d4232792f19e7bdcef9c16752ccf0bb708c6e22dd25fa7ef2529d3808 | Java | 11,368 | 350 | /**
* Copyright Copyright 2010-17 Simon Andrews
*
* This file is part of FastQC.
*
* FastQC is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or
* ... |
dc65498555fca5923659e1da7ac2287d0ac299391311968a6be31992d9a2f54d | Java | 11,677 | 404 | /**
* Copyright Copyright 2010-17 Simon Andrews
*
* This file is part of FastQC.
*
* FastQC is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or
* ... |
44fa65d74e69af69da3af6ba160afd2e3ac8fb12fe0934e7e39d7a65c00b3794 | Java | 11,827 | 155 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
d0abfee01cff83bffab80e940fde414af9e995d28e36332fd029d2794c6a809c | Java | 11,934 | 337 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
8ae83b3dd41ea9b447b3c44ced031cd87c1476d2f4f273f36904d13501239bbf | Java | 11,972 | 338 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
cdf5d5d824c5df340ae02328464207aa10d801d851b99b7bc057f4b1535dcaa5 | Java | 12,032 | 460 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
dd37dce519dcb687febadc5022edfa718b5a2acaf0bf57fdcb75b9f642d7da6d | Java | 12,032 | 235 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
a7c9a3844c4797a50e1ffa5bce76b3ae98f6c4fb43488ef27e2bc6c5d01ef35d | Java | 12,157 | 412 | /**
* Copyright Copyright 2010-17 Simon Andrews
*
* This file is part of FastQC.
*
* FastQC is free software; you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation; either version 3 of the License, or
* (at your... |
7612ed2ca99f3218f959a5aac3d0978c0fd804f7fef0b35f90cf539d7645f304 | Java | 12,210 | 350 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
1395779d70e41e081b7016312b11fa0e369d303c99571b66a572441a2b5b0af4 | Java | 12,254 | 328 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
7c67435d843b5905ee441efce70e2d5fd3d9b84b16bde3f3ed3a98d8468b7fe2 | Java | 12,710 | 416 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
17113f4b692486883af2ff655a77cc5bee08bc7bde4322e7bfb60d1f0253caa1 | Java | 13,257 | 326 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
0b8c38071e2a189477f8d4a2553a0ce3440a956230c5d59ea646977d8848a0cb | Java | 14,497 | 390 | /* Copyright (C) 2002 Univ. of Massachusetts Amherst, Computer Science Dept.
This file is part of "MALLET" (MAchine Learning for LanguagE Toolkit).
http://www.cs.umass.edu/~mccallum/mallet
This software is provided under the terms of the Common Public License,
version 1.0, as published by http://www.opensou... |
bde653256fde8f4d229d1e21f1e8febd1590ffda3106bd77389f6855bc0f67cd | Java | 14,868 | 467 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
b3c384b3e80be95a41ae6c3febb3a164cfaccc9b9c6ef5907b61f4e082194274 | Java | 15,162 | 599 | package topicmodels;
import cc.mallet.topics.TopicAssignment;
import cc.mallet.types.*;
import cc.mallet.util.CommandOption;
import cc.mallet.util.Randoms;
import com.jmatio.io.MatFileReader;
import com.jmatio.io.MatFileWriter;
import com.jmatio.types.MLChar;
import com.jmatio.types.MLDouble;
import java.io.*;
import... |
c668f9a19460d746ca0b6a1ab06023f0dd8499830568bea86e3fbbc951e7f6e5 | Java | 15,704 | 389 | /*
* Copyright (C)2009 - SSHJ Contributors
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or... |
4304ff5da424c4b23f313aa148417b213ada042a7189205846196fafa97e892b | Java | 15,802 | 381 | /*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may ... |
Subsets and Splits
No community queries yet
The top public SQL queries from the community will appear here once available.