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|---|---|---|---|---|
de0de616f63fb508baee6c953e1f7a9afb22f85307d470539db56289959a7543 | Python | 10,360 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseLayoutHierarchyType as _BaseLayoutHierarchyType
import copy as _copy
class Font(_BaseLayoutHierarchyType):
_parent_path_str = "layout.title.subtitle"
... |
fb3b77db81aae50e15a9004c01630a6e123d2f5e82ba7588b1ccc48d6eb7d2f9 | Python | 10,360 | 269 | #!/usr/bin/env python3
"""
File: plot_ieqtl_overlap.py
Created: 2022/12/14
Last Changed:
Author: M.Vochteloo
Copyright (C) 2020 University Medical Center Groningen.
A copy of the BSD 3-Clause "New" or "Revised" License can be found in the
LICENSE file in the root directory of this source tree.
"""... |
c2db9e7d479fe1b1866c89df0a4ac9f4f438ccc16f72972192a280e89f957325 | Python | 10,361 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
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from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Rangefont(_BaseTraceHierarchyType):
_parent_path_str = "parcoords"
_path_... |
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import copy as _copy
class Font(_BaseLayoutHierarchyType):
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from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Tickfont(_BaseTraceHierarchyType):
_parent_path_str = "cone.colorbar"
_pa... |
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import copy as _copy
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import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "pie.legendgrouptitle"
... |
d60ef795d613a067682d4c5d554beb905d759fbb8ff553279476e36f616bf0e9 | Python | 10,365 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
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... |
d568aeb2fab1cf0e951d00fa09fa2e97a2f009c8b463cd55243536ebde1555ef | Python | 10,366 | 335 | '''
Collection of functions for loading and organising data.
'''
import platform
import os
import pandas as pd
import numpy as np
import nibabel as nib
import pingouin as pg
def get_computer():
'''
Detects which computer the code is being run on using platform.
Useful for changing paths on the hpc vs. luck... |
210eca6edc9d8b3d3eb6ecd13b9545c51c2ee8300f227150b0ad733c0509be53 | Python | 10,367 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "volume.colorbar.title"
... |
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# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "mesh3d.colorbar.title"
... |
47088e80177ddaff6a1b4391453e8560b63fa66c7d07741dfd8c9e5733cb2c85 | Python | 10,368 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseLayoutHierarchyType as _BaseLayoutHierarchyType
import copy as _copy
class Font(_BaseLayoutHierarchyType):
_parent_path_str = "layout"
_path_str =... |
66a0167bd66fb3e6af8acd61333faebd984129f178b3238b470052f3327d9d85 | Python | 10,369 | 244 | import time
import atexit
import os
import pathlib
from datetime import datetime
from threading import Timer
import csv
import json
import flatten_json
from modular_client import ModularClients
DEBUG = False
class MouseJoystickInterface():
'''
MouseJoystickInterface.
Example Usage:
dev = MouseJoys... |
35c48ea4bcd64b76d441c18a9e98f28be600007bbefb6879b0e70af66386d3c5 | Python | 10,370 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
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from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
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... |
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# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "cone.legendgrouptitle"
... |
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# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "heatmap.colorbar.title"
... |
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import copy as _copy
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_parent_path_str = "layout.newshape.label"
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# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Tickfont(_BaseTraceHierarchyType):
_parent_path_str = "mesh3d.colorbar"
_... |
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# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
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# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Tickfont(_BaseTraceHierarchyType):
_parent_path_str = "volume.colorbar"
_... |
edd2e73f4a639442fbe44ff69d43c72fb78c1349ce0302f5e97da06e6c931711 | Python | 10,372 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
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... |
06aa83bb7bab0eb743a4349b3ffa125e35a5995b6a540c9f8dbb46ca62bec242 | Python | 10,373 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseLayoutHierarchyType as _BaseLayoutHierarchyType
import copy as _copy
class Tickfont(_BaseLayoutHierarchyType):
_parent_path_str = "layout.scene.yaxis"... |
a849faa4fd910d28e2227fd2f3ba6a674813e1bca758ecbeb9cee6b7bd05ecb2 | Python | 10,373 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseLayoutHierarchyType as _BaseLayoutHierarchyType
import copy as _copy
class Tickfont(_BaseLayoutHierarchyType):
_parent_path_str = "layout.scene.zaxis"... |
aa094266f187b3bb97459a47571bc6db0a0b48bd70e3fd87ce72406129fd25cf | Python | 10,373 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseLayoutHierarchyType as _BaseLayoutHierarchyType
import copy as _copy
class Tickfont(_BaseLayoutHierarchyType):
_parent_path_str = "layout.scene.xaxis"... |
13e623a69c69fed502ed6076baed43acbad4dc1fd50a31a8cb445a50addd4b02 | Python | 10,374 | 162 | """
1D and 2D Parameter Continuations
=================================
In this tutorial, you will learn how to perform 1D and 2D
`numerical parameter continuations <http://www.scholarpedia.org/article/Numerical_analysis#Numerical_solution_of_
differential_and_integral_equations>`_ in `PyCoBi` with automatic fold `bif... |
a0cb36d98d6d3c72d9376ada0d2cb91da0f253adb2a702bc724d2995d5beeb1a | Python | 10,375 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "table.legendgrouptitle"
... |
c09b1b7f7da3397caaa99400f056d7f6fd7b2f23d2d64a9e9ee696371173dc71 | Python | 10,375 | 225 | # 均匀采样效果较差
import json
import numpy as np
import os, sys
from collections import Counter
from sklearn import preprocessing
from sklearn.metrics import f1_score
from sklearn.metrics import confusion_matrix
import torch
import torch.nn as nn
import torch.nn.utils.rnn as rnn_utils
import torch.nn.functional as F
from torc... |
cacdc4be5bb8f07a40ce140423633aaa78c8ecf63b67466d83c7e87a9afe4747 | Python | 10,375 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "image.legendgrouptitle"
... |
f0eb812c20a88c1da420aaee5ef7cdcd098f3dc839bc26d761eabab739341690 | Python | 10,375 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "splom.legendgrouptitle"
... |
a2868fb3cf318d6ee26b2a258348d68d77a01b3723640dfbefc12002f2f7f85f | Python | 10,376 | 273 | """The five wave-0 static lints, each with its plant (build item 4).
All sub-second except the numeral census (marked heavy: it AST-walks ~1,500
files in one go, well inside the 20 s heavy budget). None can flake: every
lint is a set difference over static parses plus D25 KNOWN-GAP mechanics.
"""
from __future__ impo... |
259424d907a905f9c396365855f18d0926fe5b6ac16b2072172034e1df9cec7b | Python | 10,377 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Tickfont(_BaseTraceHierarchyType):
_parent_path_str = "heatmap.colorbar"
... |
416464e957767123f82d69fd27860a27f48b836fd5a9caf1a9b467ede8ec8d8a | Python | 10,377 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Tickfont(_BaseTraceHierarchyType):
_parent_path_str = "contour.colorbar"
... |
5bdd0dea99fa2146d8ed0f901022c50172c635bc93f93e8cf09672e7d65323c2 | Python | 10,377 | 300 | #!/bin/usr/env python
'''
This package includes functions to help running adpred model on protein
sequences.
'''
__author__ = "Ariel Erijman"
__copyright__ = "Copyright 2020, ADpred project"
__credits__ = ["Ariel Erijman"]
__license__ = "MPL 2.0"
__version__ = "1.2.8"
__maintainer__ = "Ariel Erijman"
__email__ = "aer... |
73efeab12670e2c670a2e6034e5b7dac826a638a3b0e3ee75792f5ab27f1aebd | Python | 10,377 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseLayoutHierarchyType as _BaseLayoutHierarchyType
import copy as _copy
class Font(_BaseLayoutHierarchyType):
_parent_path_str = "layout.scene.annotation... |
d3caff23bdccbb3acd38afb83a8e284f50ff0e1e286ea8d5e46de58569e4611d | Python | 10,377 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Tickfont(_BaseTraceHierarchyType):
_parent_path_str = "surface.colorbar"
... |
07dccc9b3d390cc0a6b55d726fb166a6229fe0727b6add6000ed125c4a0802b8 | Python | 10,380 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseLayoutHierarchyType as _BaseLayoutHierarchyType
import copy as _copy
class Font(_BaseLayoutHierarchyType):
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094abc9fd9c1c609dd1a06d0c1846c9aafa2bbb31966a894565133c044f473b4 | Python | 10,380 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
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import copy as _copy
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_parent_path_str = "mesh3d.legendgrouptitle"
... |
0bb73c366bc1b98d48fec5aec2feeaf4d04ac0d6e81f54bc2c9a5d77e779c5d1 | Python | 10,380 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
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import copy as _copy
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... |
0eba861d40aebb1baa31082e36eea1b7d5659ce574d10dee425d4ede4d05a485 | Python | 10,380 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
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... |
4424163f531a26fac94b8ec4a1eadeab54919e1f3150de61805130b26deef869 | Python | 10,380 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
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... |
4b767afb19219ad1a8897dcaa616122185ae16c870a5ff07901d01821eaa52a4 | Python | 10,380 | 284 | """P4 tests for container persistence, rename, and capability honesty."""
from __future__ import annotations
import hashlib
import json
from enum import Enum
from pathlib import Path
from typing import Any
import pytest
import torch
from torch import nn
import torchlens as tl
from torchlens.ir.container_registry im... |
4d97db8fc15e32d2b76faf8317299dd6d327dd5745d9318565ac27ee105e4b0e | Python | 10,380 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "funnel.legendgrouptitle"
... |
85dcda1a750215c9890ae6f04f832d35e2045df4d72b2f7042c81d660580c8b1 | Python | 10,380 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
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... |
95f43396653325afe505d279383d9617bdce1080560da66291d5e03154d197a4 | Python | 10,380 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseLayoutHierarchyType as _BaseLayoutHierarchyType
import copy as _copy
class Font(_BaseLayoutHierarchyType):
_parent_path_str = "layout.scene.xaxis.titl... |
aac7f1a7c5919f024a405d5d38a465f543f3f7240742774459fa2f72ed542945 | Python | 10,380 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "volume.legendgrouptitle"
... |
c2d698227c009ecdd7d2b6df8631cc9ad712f3460e85748fc5623dc854dd5412 | Python | 10,380 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
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from plotly.basedatatypes import BaseLayoutHierarchyType as _BaseLayoutHierarchyType
import copy as _copy
class Font(_BaseLayoutHierarchyType):
_parent_path_str = "layout.scene.yaxis.titl... |
d533acaa7e8b0e009e804832ec814334e804e8c8d0e39964c9cb96376682c308 | Python | 10,380 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
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... |
70aaf1b393df2236657ba39f7f6d31b66edff22819e8635f97328ab7f6c16034 | Python | 10,381 | 268 | #################################################################
# Importing samtools, bcftools, and htslib
#
# For each package PKG:
#
# rm -rf PKG
# python import.py PKG path/to/download/PKG-X.Y
import fnmatch
import os
from pathlib import Path
import re
import itertools
import shutil
import sys
import hashlib
EX... |
255501982b2eaea75c65a9d0b44c220ba459cda880a7d2b10403332792c97d05 | Python | 10,382 | 281 | #!/usr/bin/env python3
"""
Diagnostic K — Tier 2.1: microstate dynamics.
Adds 12 microstate features (coverage/duration/occurrence for 4 canonical
states A/B/C/D) on top of the existing feature pool.
Tests:
1. 7D + microstates (19 feat) vs 7D baseline
2. 7D + ap + topo + microstates (24 feat)
3. 7D + peaks + to... |
b589f5aa3bf90a76a36b7100217f7d2ee2e2605adbc3ab8ceb4aa92af7d3c097 | Python | 10,382 | 178 | """
demo of evaluating node embedding for different downstream task(s)
Note that, the 'main.py' file contains all functions in 'eval.py'. You may test DynWalks in one go using 'main.py' itself by set task=all.
For fairness, this 'eval.py' as well as all files in 'libne' will be used to evalate other dynamic network e... |
9ccd42f7a618eea2a00234b83e918fdd7dcc50deae6e523864e0eded7742c7d2 | Python | 10,383 | 298 | import numpy as np
import pandas as pd
import matplotlib.pyplot as plt
from mpl_toolkits.axes_grid1 import make_axes_locatable
from modular_splicing.motif_names import get_motif_names
from modular_splicing.motif_perturbations.perturbations_on_standardized_sample import (
all_mpi_on_standardized_sample,
)
from mod... |
3b5e86d92ec33cfecc94031295d3bfa538ed065ce9be03cb1926755edac1c99f | Python | 10,384 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseLayoutHierarchyType as _BaseLayoutHierarchyType
import copy as _copy
class Tickfont(_BaseLayoutHierarchyType):
_parent_path_str = "layout.ternary.baxi... |
474f8e620b5d87d58b3116d4c0c54d0b64973247d1f61da3cd549b78c0084501 | Python | 10,384 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseLayoutHierarchyType as _BaseLayoutHierarchyType
import copy as _copy
class Tickfont(_BaseLayoutHierarchyType):
_parent_path_str = "layout.ternary.aaxi... |
6bdc85da1f5f0b6ebf1dfb14efa9492293b12cc631f51c343afdf412e1b15320 | Python | 10,384 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseLayoutHierarchyType as _BaseLayoutHierarchyType
import copy as _copy
class Tickfont(_BaseLayoutHierarchyType):
_parent_path_str = "layout.ternary.caxi... |
0c30ddffb42136f8a20d5d52f9a43ac4a6d6cbfc7863a3e8c3da03cd19b87d79 | Python | 10,385 | 342 | import warnings
from contextlib import nullcontext as does_not_raise
from pathlib import Path
import h5py
import numpy as np
import pandas as pd
import pytest
from pynwb.testing.mock.base import mock_TimeSeries
from pynwb.testing.mock.file import mock_NWBFile
import pynapple as nap
@pytest.mark.parametrize(
"ti... |
268365756c725643892e78c3990af7664ea8026d0643fd466a9bed8c6543d8a9 | Python | 10,385 | 224 | # 均匀采样效果较差
import json
import numpy as np
import os, sys
import random
from collections import Counter
from sklearn import preprocessing
from sklearn.metrics import f1_score
from sklearn.metrics import confusion_matrix
import torch
import torch.nn as nn
import torch.nn.utils.rnn as rnn_utils
import torch.nn.functional ... |
4c5cffa0893b3428e800ed05fa653408c21dcdab5d0b31a66ed9dba2c70e8ae2 | Python | 10,385 | 270 | """L6 stage 2: Selection-consuming do() under the mask-application contract.
Pins the normative contract rows: edit-then-scatter on a fresh tensor
(helpers stay mask-oblivious, the engine owns masking), the whole-site
short-circuit, the closed ``selection_apply_invalid`` reason set
(shape | dtype | device | broadcast ... |
d723baa5d4858338c77dc5c01cafa82502813f7f59e10698389c6093d224a720 | Python | 10,385 | 223 | # 均匀采样效果较差
import json
import numpy as np
import os, sys
from collections import Counter
from sklearn import preprocessing
from sklearn.metrics import f1_score
from sklearn.metrics import confusion_matrix
import torch
import torch.nn as nn
import torch.nn.utils.rnn as rnn_utils
import torch.nn.functional as F
from torc... |
2422a900da3c4de34cd71ca8b6274a15c0b13ce7a8c8371a6f143f40cce61b66 | Python | 10,386 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "parcats.legendgrouptitle"
... |
682af3578d6d1a6f3d05124e3e3c1f83b5a9aa0c8ae2c43cdb9d9edeaeb8633c | Python | 10,386 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "treemap.legendgrouptitle"
... |
93626d1ca43204e6c8681f0f0b6dd2967906133437892daa2572e285a0a81c3d | Python | 10,386 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "surface.legendgrouptitle"
... |
d0081e7f577c01fe11a22ea1170815212f1583c781106967fcf5b5d01911e3e0 | Python | 10,386 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "heatmap.legendgrouptitle"
... |
d0dffd83904b174b615e20e6537199fb68c7d251e48a2a91923f6ad09e5f45d5 | Python | 10,386 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "contour.legendgrouptitle"
... |
fb9451523386d40d8a9a41d5e18484f8840a5b53fc346e9414ac7b7fe7c82cb5 | Python | 10,386 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "scatter.legendgrouptitle"
... |
9c5f6df4a67c4f93293f3943b99f5a962b8e9ab55c1a3a312afca01ce17f4eae | Python | 10,388 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "bar.marker.colorbar.title"... |
abdf058637d0505900a0818631843db75f94aeecfe2dcb8aff54eeae8f5607eb | Python | 10,388 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "streamtube.colorbar.title"... |
ae1b2c47056f309d1320d478962416d2cb99176a97c11cc9f2354dad0f213a3c | Python | 10,388 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "choropleth.colorbar.title"... |
dab68ddc59a31a5c89a4f269c44dabbaa523fb81cf07a2348530709793a382c0 | Python | 10,388 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "densitymap.colorbar.title"... |
e3a04063f4ab29b9b4de75006a5a651edc58697a7c91cccb6631534fee48ee09 | Python | 10,388 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "isosurface.colorbar.title"... |
aa8bebb68626eb9144551a074b6c0c6b9eaad3d196d5bb9e9bdeea55398fca86 | Python | 10,389 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseLayoutHierarchyType as _BaseLayoutHierarchyType
import copy as _copy
class Tickfont(_BaseLayoutHierarchyType):
_parent_path_str = "layout.smith.realax... |
e8c1c84ffe2776decf30e2407a74478790cf69d413f8663bf22d9f2481223a32 | Python | 10,389 | 292 | import torch
from icecream import ic
import random
import numpy as np
from kinematics import get_init_xyz
import torch.nn as nn
from util_module import ComputeAllAtomCoords
from util import *
from inpainting_util import MSAFeaturize_fixbb, TemplFeaturizeFixbb, lddt_unbin
from kinematics import xyz_to_t2d
def mask_inp... |
05ca52080e6efdd71b074fe2a514266729e95d1810b0d94571955a5335805932 | Python | 10,390 | 266 | #!/usr/bin/env python3
"""
deploy_classifier.py — Apply the trained classifier to a new cohort.
Loads ``trained_model/trained_model.json`` (produced by
``build_trained_model.py``) and scores subjects in a per-cohort
feature JSON. Implements the deployment-mode pipeline described in
the paper §2.4 and §4.5:
1. Read... |
83c0ae66f57c5d93adeb5362606a97da5eb4a01786a1239352e722e4b074dda3 | Python | 10,390 | 218 | import torch
import torch.nn as nn
import torch.nn.functional as F
from model.dbb_transforms import *
def conv_bn(in_channels, out_channels, kernel_size, stride=1, padding=0, dilation=1, groups=1,
padding_mode='zeros'):
conv_layer = nn.Conv2d(in_channels=in_channels, out_channels=out_channels, k... |
9bde10674ef5800730c9e86abe46b47da7cef6766d2c498570112d7a0f28575a | Python | 10,390 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseLayoutHierarchyType as _BaseLayoutHierarchyType
import copy as _copy
class Font(_BaseLayoutHierarchyType):
_parent_path_str = "layout.ternary.baxis.ti... |
a52b6c13d09f90e803911ce4667def103b2d5199a47fc072662aa6162e2e279d | Python | 10,390 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseLayoutHierarchyType as _BaseLayoutHierarchyType
import copy as _copy
class Font(_BaseLayoutHierarchyType):
_parent_path_str = "layout.ternary.caxis.ti... |
a6f52d409cb0e6098f03b31cac42c9b123390bc5079fec458386492dafab7e84 | Python | 10,390 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseLayoutHierarchyType as _BaseLayoutHierarchyType
import copy as _copy
class Font(_BaseLayoutHierarchyType):
_parent_path_str = "layout.ternary.aaxis.ti... |
4e46c9a993c209424dfa91611f3a27e7bd493123331c11670add19dab8cdadb2 | Python | 10,391 | 341 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseLayoutHierarchyType as _BaseLayoutHierarchyType
import copy as _copy
class Font(_BaseLayoutHierarchyType):
_parent_path_str = "layout.hoverlabel"
... |
5d589764acbe2996024d228361d563c6a8f7ac89b3048de38b7042b3fc00fea7 | Python | 10,391 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "barpolar.legendgrouptitle"... |
6319d73f18127964989161c9731c0ed270259dfab034119d97f717b8c07ede02 | Python | 10,391 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "sunburst.legendgrouptitle"... |
b265771e5b251d0f24df520b02255b649295b89d95cda1dc364c9adac634b286 | Python | 10,391 | 341 | import numpy as np
from scipy.stats import gmean
import pytest
from pytest import approx
from pyriemann.utils.geodesic import geodesic_riemann
from pyriemann.utils.mean import (
mean_covariance,
mean_ale,
mean_alm,
mean_euclid,
mean_harmonic,
mean_identity,
mean_kullback_sym,
mean_logde... |
144dc7412f2ff942f761fdec11b32e62334edae0ee7542c0da5a8d15c6399e39 | Python | 10,392 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Tickfont(_BaseTraceHierarchyType):
_parent_path_str = "streamtube.colorbar"
... |
17e7ba8b1310a154e5ca9d917e04af6aef2d8ce6722e7f5612a940ac23aedde2 | Python | 10,392 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Tickfont(_BaseTraceHierarchyType):
_parent_path_str = "densitymap.colorbar"
... |
487897b7e8f388a8b6f5bbcfab698f8b01fbb78421addb155f9f8aa4c2a5db68 | Python | 10,392 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Tickfont(_BaseTraceHierarchyType):
_parent_path_str = "choropleth.colorbar"
... |
6a6bee87a84a16ac92f4db4e1ccbf343cf4971ba332e95273edb17e9da0ceb33 | Python | 10,392 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Tickfont(_BaseTraceHierarchyType):
_parent_path_str = "isosurface.colorbar"
... |
a519942cd05751427ab5ba75ae83270066d998717913afef498ec7d82316d5cc | Python | 10,392 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Tickfont(_BaseTraceHierarchyType):
_parent_path_str = "bar.marker.colorbar"
... |
0c8ac54f91cf67e558b766977e74e4de3f77d25c017c54a69caa4b315fbac974 | Python | 10,393 | 302 | #!/usr/bin/env python
# -*- coding: UTF-8 -*-
"""4. Transfer Learning with Your Own Image Dataset
=======================================================
Dataset size is a big factor in the performance of deep learning models.
``ImageNet`` has over one million labeled images, but
we often don't have so much labeled d... |
10193d72c46fbeed4f289ac75354bb5b5133e470b98a2b9e4bb0665c8477bddc | Python | 10,393 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "histogram2d.colorbar.title... |
c64b9c13463b6d3a7cbf463bbbdf21c7d03a0ab4130d26750f8dde00e6968274 | Python | 10,393 | 301 | #################################################################
# Code written by Edward Choi (mp2893@gatech.edu)
# For bug report, please contact author using the email address
#################################################################
import sys, random
import numpy as np
import cPickle as pickle
from colle... |
515003156281eaaa74ee141097c60c03fbe9aaf3c2729a33277e732553f1ead1 | Python | 10,394 | 268 | import os
import voxcell
import json
import numpy
class ParcellationLevel(object):
def __init__(self, root, config, hierarchy, region_volume, overwrite=False):
self._root = root
if not os.path.isdir(root):
os.makedirs(root)
self._config = config
self.child = None
... |
10a2bb75ea0addd4e8826d85a3458ca021592e7d325d2a0dfc4edc9fa8a1e060 | Python | 10,395 | 341 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Textfont(_BaseTraceHierarchyType):
_parent_path_str = "contour"
_path_str... |
264b97d34419335e6d18967d60b089a7531030511bf8bc5efe88668105e00148 | Python | 10,396 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "scattergl.legendgrouptitle... |
376e673a9b9eff859ab5b617b628f7847bafc5b1deac3f4ae2c113c7c3f525f5 | Python | 10,396 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "indicator.legendgrouptitle... |
67bb3fdfa10c151503004607deb2fbddc2155f4406386a83ea0c7ecb0e154ce4 | Python | 10,396 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "histogram.legendgrouptitle... |
6f2ff51710686320bc4f06af321561596bd2c07592f1bc917dbf7228723e34d7 | Python | 10,396 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "scatter3d.legendgrouptitle... |
a07f6bdb86019a234ec4a1bc697996bd7ba08b02dbbdd05ec834b1f1bcd479f0 | Python | 10,396 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "waterfall.legendgrouptitle... |
dd67c55cacbe69f6c90c01a73f78cfa1defa6d47cb451584242e21d29fc54fbd | Python | 10,396 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "parcoords.legendgrouptitle... |
4071aea477e69b58334da00d958f553dd29dd3c226dea1432cacb14fc46d0ed9 | Python | 10,397 | 356 | import re
from contextlib import nullcontext as does_not_raise
import numpy as np
import pytest
from scipy.signal import hilbert
import pynapple as nap
@pytest.mark.parametrize(
"param_name, invalid_value, exception",
[
(
"data",
None,
pytest.raises(
... |
47b789f19d1f0a69a3008d2fc8fdf7f117972aec909a31b4d56695d4857d04c6 | Python | 10,397 | 247 | #!/usr/bin/python3
# -*- coding: utf-8 -*-
"""Workflow for creating shuffled versions of a neuronal spiketrain dataset and
training a graphical model on each.
"""
import time
import sys
import os
import logging
import crf_util
from gridsearch_train_crfs import GridsearchTrial
from workflow import Workflow
class ... |
ebac2a5ef2e4f36776b8a3e2357614ecc89c37197ac087e95c31f3992ccd32b8 | Python | 10,397 | 252 | """ Normalization + Activation Layers
Provides Norm+Act fns for standard PyTorch norm layers such as
* BatchNorm
* GroupNorm
* LayerNorm
This allows swapping with alternative layers that are natively both norm + act such as
* EvoNorm (evo_norm.py)
* FilterResponseNorm (filter_response_norm.py)
* InplaceABN (inplace_a... |
0d68b73099c4b83d6c4ba0b1707cea5eaf955fc8088e1fe652cfc92991014f77 | Python | 10,398 | 340 | # --- THIS FILE IS AUTO-GENERATED ---
# Modifications will be overwitten the next time code generation run.
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class Font(_BaseTraceHierarchyType):
_parent_path_str = "splom.marker.colorbar.titl... |
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