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#!/usr/bin/env bash # Copyright 2012-2014 Johns Hopkins University (Author: Daniel Povey, Yenda Trmal) # Apache 2.0 # # This script provides official CHiME-5 challenge submission scores per room and session. # It first calculates the best search parameter configurations by using the dev set # and also create the trans...
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#!/bin/bash -u # Copyright 2012 Arnab Ghoshal # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # THIS CODE IS PROVIDED *AS IS* BASIS, WITHOUT...
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#!/usr/bin/env bash . ./cmd.sh set -e stage=1 train_stage=-10 . ./path.sh . ./utils/parse_options.sh mkdir -p exp/nnet2_online if [ $stage -le 1 ]; then mfccdir=mfcc_hires if [[ $(hostname -f) == *.clsp.jhu.edu ]] && [ ! -d $mfccdir/storage ]; then date=$(date +'%m_%d_%H_%M') utils/create_split_dir.pl /...
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#!/usr/bin/env bash # Copyright 2014 Gaurav Kumar. Apache 2.0 . ./path.sh #First get the list of unique words from our text file if [ $# -lt 1 ]; then echo 'Usage fsp_prepare_dict.sh lexicon' exit 1; fi stage=0 dir=`pwd`/data/local/dict datadir=`pwd`/data/local/data/train_all mkdir -p $dir local=`pwd`/local ...
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#!/usr/bin/env bash # Copyright 2012 Johns Hopkins University # Apache 2.0. stage=0 [ -f ./path.sh ] && . ./path.sh [ -f ./cmd.sh ] && . ./cmd.sh [ -f /export/babel/data/software/env.sh ] && . /export/babel/data/software/env.sh . utils/parse_options.sh if [ $# -ne 3 ]; then echo "Usage: create_shadow_dataset....
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#!/usr/bin/env bash # Copyright 2018 Ashish Arora (Johns Hopkins University) # 2018 Desh Raj (Johns Hopkins University) set -e stage=0 nj=20 # bentham_hwr_database points to the official database path on the JHU grid. If you have not # already downloaded the data, you will have to first downloa...
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# Download data from zenodo bash get_data.sh # Process data into anndata for siVAE taskset -a -c 0-19 python preprocess_D11.py python preprocess_D52.py # Optional lines to move data get -r /share/quonlab/workspaces/yonchoi/data/iPSC_neuronal/data/rita_preprocessed/h5ad/* /home/yongin/projects/pypi/siVAE/Experiment...
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# Download data from zenodo bash get_data.sh # Process data into anndata for siVAE taskset -a -c 0-19 python preprocess_D11.py python preprocess_D52.py # Optional lines to move data get -r /share/quonlab/workspaces/yonchoi/data/iPSC_neuronal/data/rita_preprocessed/h5ad/* /home/yongin/projects/pypi/siVAE/Experiment...
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#!/usr/bin/env bash # Copyright 2013 Johns Hopkins University (authors: Yenda Trmal) # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # THIS C...
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#!/bin/bash ## ## ATAC-seq using Bowtie 2 ## # script filename script_path="${BASH_SOURCE[0]}" script_name=$(basename "$script_path") route_name=${script_name/%.sh/} echo -e "\n ========== ROUTE: $route_name ========== \n" >&2 # check for correct number of arguments if [ ! $# == 2 ] ; then echo -e "\n $script_nam...
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#!/bin/bash # Copyright 2012 Arnab Ghoshal # Copyright 2010-2011 Microsoft Corporation # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # #...
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#!/usr/bin/env bash # Copyright 2014 Gaurav Kumar. Apache 2.0 # To be run from one level above this directory # Generate the text for the LM training tmp_dir=data/local/tmp train_all=data/local/data/train_all if [ $# -lt 1 ]; then echo "Specify the location of the split files" exit 1; fi splitFile=$1 split=tr...
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#!/usr/bin/env bash # Copyright 2016 David Snyder # 2017-2018 Matthew Maciejewski # Apache 2.0. # This script performs agglomerative clustering using scored # pairs of subsegments and produces a rttm file with speaker # labels derived from the clusters. # Begin configuration section. cmd="run.pl" ...
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#!/usr/bin/env bash # Copyright 2012 Johns Hopkins University (Author: Guoguo Chen) # Apache 2.0. # Begin configuration section. case_insensitive=true use_icu=true icu_transform="Any-Lower" silence_word= # Optional silence word to insert (once) between words of the transcript. # End configuration section. echo $0 ...
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#!/usr/bin/env bash # To be run from one level above this directory # Generate the text for the LM training tmp_dir=data/local/tmp train_all=data/local/data/train_all if [ $# -lt 1 ]; then echo "Specify the location of the split files" exit 1; fi splitFile=$1 split=train # Train only if [ -d $tmp_dir/$split ]; t...
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#!/usr/bin/env bash # Self-contained environment for the import-carla-walker skill. # Source before the skill's other scripts: source env.sh # # carla-agentic-tools is standalone (not inside a CARLA checkout), so the target # instance is chosen at runtime. Both roots are overridable and must point at a # real, built C...
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#!/usr/bin/env bash . ./cmd.sh ## You'll want to change cmd.sh to something that will work on your system. ## This relates to the queue. . ./path.sh stage=0 train_set=multi # Set this to 'clean' or 'multi' test_sets="eval92 0166" train=true # set to false to disable the training-related scripts ...
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""" StyleMapGAN Copyright (c) 2021-present NAVER Corp. This work is licensed under the Creative Commons Attribution-NonCommercial 4.0 International License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc/4.0/ or send a letter to Creative Commons, PO Box 1866, Mountain View, CA 94042, U...
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#!/usr/bin/env bash # Preflight for run-carla-server. Read-only; exits non-zero only on hard # blockers. Run by the MCP check_prerequisites(name) tool. # On-camera banner: every skill run announces itself, so a terminal recording # shows which skill is doing the work rather than just its output. The name is # taken fro...
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#!/usr/bin/env bash # 1b is as 1a but using more epochs: 100 instead of 60. # This helps a bit. #exp/resnet1b_cifar10: num-iters=133 nj=1..2 num-params=1.3M dim=96->10 combine=-0.01->-0.01 loglike:train/valid[87,132,final]=(-0.13,-0.03,-0.01/-0.27,-0.21,-0.16) accuracy:train/valid[87,132,final]=(0.95,0.99,1.00/0.91,0...
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#!/usr/bin/env bash # Copyright 2012 Johns Hopkins University (Author: Guoguo Chen, Yenda Trmal) # Apache 2.0. help_message="$(basename $0): do keyword indexing and search. data-dir is assumed to have kws/ subdirectory that specifies the terms to search for. Output is in decode-d...
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#!/usr/bin/env bash # Copyright 2020 Huawei Technologies Co., Ltd # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applica...
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#!/usr/bin/env bash # Kaldi ASR baseline for the CHiME-4 Challenge (2ch track: 2 channel track) # # Copyright 2016 University of Sheffield (Jon Barker, Ricard Marxer) # Inria (Emmanuel Vincent) # Mitsubishi Electric Research Labs (Shinji Watanabe) # 2017 JHU CLSP (Szu-Jui Chen) ...
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#!/usr/bin/env bash # Copyright 2012 Johns Hopkins University (Author: Guoguo Chen, Yenda Trmal) # Apache 2.0. help_message="$(basename $0): do keyword indexing and search. data-dir is assumed to have kws/ subdirectory that specifies the terms to search for. Output is in decode-d...
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#!/usr/bin/env bash . ./cmd.sh . ./path.sh stage=0 # the location of the LDC corpus; this location works for the CLSP grid. datadir=/export/corpora5/LDC/LDC2006S37 # The corpus and lexicon are on openslr.org #speech_url="http://www.openslr.org/resources/39/LDC2006S37.tar.gz" lexicon_url="http://www.openslr.org/reso...
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#!/bin/bash WORK=/srv/scratch/shared/mitra/leepc12/run/chipseq_test/CTCF/Snyder_CTCF_GM12878_PE mkdir -p $WORK; cd $WORK bds_scr Snyder_CTCF_GM12878_PE /users/leepc12/code/TF_chipseq_pipeline/chipseq.bds -pe -nth 12 -species hg19 -title CTCF_Snyder_CTCF_GM12878_PE \ -fastq1_1 /srv/scratch/shared/mitra/leepc12/data/CTC...
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#!/usr/bin/env bash # Recipe for Mozilla Common Voice corpus v1 # # Copyright 2017 Ewald Enzinger # Apache 2.0 data=$HOME/cv_corpus_v1 data_url=https://common-voice-data-download.s3.amazonaws.com/cv_corpus_v1.tar.gz . ./cmd.sh . ./path.sh stage=0 . ./utils/parse_options.sh set -euo pipefail if [ $stage -le 0 ]...
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#!/usr/bin/env bash # Self-contained environment for the Scenic skills. Source before the other # scripts: source scripts/env.sh # # Scenic is a pip package with its own `scenic` CLI; nothing is built. What a run # needs is that CLI, an importable `carla` client matching the server, the world # model the scenario name...
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#!/usr/bin/env bash set -euo pipefail ALPAMAYO_ROOT="$(cd "$(dirname "${BASH_SOURCE[0]}")" && pwd)" CARLA_ROOT="$(realpath "${ALPAMAYO_ROOT}/../../../..")" SOURCE_DIR="${ALPAMAYO_ROOT}/.cache/src/alpamayo2" MODEL_ENV="${ALPAMAYO_ROOT}/.venv-model" UV_CACHE_DIR="${ALPAMAYO_ROOT}/.cache/uv" CONTROL_PYTHON="python3" MOD...
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#!/usr/bin/env bash # Copyright 2017 Nagendra Kumar Goel # 2018 Vimal Manohar # Apache 2.0 # This is a script to train a TDNN for speech activity detection (SAD) # using statistics pooling for long-context information. stage=0 train_stage=-10 get_egs_stage=-10 egs_opts= chunk_width=20 # The context ...
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#!/usr/bin/env bash # This script is based on aishell/s5/local/nnet3/tuning/run_tdnn_1a.sh # In this script, the neural network in trained based on hires mfcc and online pitch. # The online pitch setup requires a online_pitch.conf in the conf dir for both training # and testing. set -e stage=0 train_stage=-10 affix...
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#!/usr/bin/env bash # Copyright 2012-2014 Brno University of Technology (Author: Karel Vesely) # 2014 Guoguo Chen # Apache 2.0 # This example script trains a DNN on top of fMLLR features. # The training is done in 3 stages, # # 1) RBM pre-training: # in this unsupervised stage we train stack of R...
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#!/usr/bin/env bash # Copyright 2017 Nagendra Kumar Goel # 2018 Vimal Manohar # Apache 2.0 # This is a script to train a TDNN for speech activity detection (SAD) # using statistics pooling for long-context information. stage=0 train_stage=-10 get_egs_stage=-10 egs_opts= chunk_width=20 # The context ...
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#!/usr/bin/env bash # Self-contained environment for the build-carla-ue58 skill (CARLA on UE 5.8). # Source before the skill's other scripts: source scripts/env.sh # # UE 5.8 CARLA is built with CMake, not the UE4 Makefile: there is no `Makefile` # and no `Util/BuildTools/` in this tree. Everything goes through # cm...
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#!/usr/bin/env bash # Self-contained environment for the run-autoware-ue58 skill (CARLA on UE 5.8). # Source before the skill's other scripts: source scripts/env.sh # # UE 5.8 CARLA is built with CMake, not the UE4 Makefile: there is no `Makefile` # and no `Util/BuildTools/` in this tree. Everything goes through # c...
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#!/usr/bin/env bash # Self-contained environment for the package-carla-ue58 skill (CARLA on UE 5.8). # Source before the skill's other scripts: source scripts/env.sh # # UE 5.8 CARLA is built with CMake, not the UE4 Makefile: there is no `Makefile` # and no `Util/BuildTools/` in this tree. Everything goes through # ...
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#!/usr/bin/env bash # Self-contained environment for the import-carla-ue58-map skill (CARLA on UE 5.8). # Source before the skill's other scripts: source scripts/env.sh # # UE 5.8 CARLA is built with CMake, not the UE4 Makefile: there is no `Makefile` # and no `Util/BuildTools/` in this tree. Everything goes through #...
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#!/usr/bin/env bash # Self-contained environment for the run-carla-ue58-server skill (CARLA on UE 5.8). # Source before the skill's other scripts: source scripts/env.sh # # UE 5.8 CARLA is built with CMake, not the UE4 Makefile: there is no `Makefile` # and no `Util/BuildTools/` in this tree. Everything goes through #...
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#!/usr/bin/env bash # Self-contained environment for the import-carla-ue58-prop skill (CARLA on UE 5.8). # Source before the skill's other scripts: source scripts/env.sh # # UE 5.8 CARLA is built with CMake, not the UE4 Makefile: there is no `Makefile` # and no `Util/BuildTools/` in this tree. Everything goes through ...
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#!/usr/bin/env bash # Self-contained environment for the import-carla-ue58-walker skill (CARLA on UE 5.8). # Source before the skill's other scripts: source scripts/env.sh # # UE 5.8 CARLA is built with CMake, not the UE4 Makefile: there is no `Makefile` # and no `Util/BuildTools/` in this tree. Everything goes throug...
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#!/bin/sh # exit when command fails set -e . scripts/common.sh # defaults exepath=./f5c testdir=test/ecoli_2kb_region bamfile=${testdir}/reads.sorted.bam ref=${testdir}/draft.fa reads=${testdir}/reads.fasta batchsize=256 max_bases=2M if command -v nproc > /dev/null; then threads=$(nproc --all) else threads=8 fi ...
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#!/usr/bin/env bash # Copyright 2012 Johns Hopkins University (Author: Guoguo Chen) # Apache 2.0. # Begin configuration section. case_insensitive=true use_icu=true icu_transform="Any-Lower" silence_word= # Optional silence word to insert (once) between words of the transcript. # End configuration section. echo $0 ...
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#!/usr/bin/env bash # Copyright (c) 2016, Johns Hopkins University ( Yenda Trmal <jtrmal@gmail.com> ) # License: Apache 2.0 # Begin configuration section. stage=2 dir=dev10h.pem # End configuration section . ./utils/parse_options.sh set -e -o pipefail set -o nounset # Treat unset variables...
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# ============================================================================== # Download the adata from zenodo # ============================================================================== bash download_data.sh # ============================================================================== # Process data into...
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#!/bin/bash # Update OMIM and Orphanet annotations for cre, the cre-hg38 branch, crg2-pacbio cre, and CPHI-DRAGEN-anno cre # # This script will: # 1. Update OMIM and Orphanet annotations in all repos # 2. Create new branches and push changes to remote repos # 3. After running, you'll need to create and merge PRs in eac...
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#!/usr/bin/env bash # Copyright 2012 Johns Hopkins University (Author: Guoguo Chen, Yenda Trmal) # Apache 2.0. # Begin configuration section. cmd=run.pl case_insensitive=true subset_ecf= rttm_file= extraid= use_icu=true icu_transform="Any-Lower" kwlist_wordlist=false langid=107 annotate=true silence_word= # Optiona...
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#!/bin/bash #PBS -N F5C-METHCALL #PBS -q gpuvolta #PBS -l ncpus=12 #PBS -l ngpus=1 #PBS -l mem=96GB #PBS -l jobfs=350GB #PBS -l walltime=48:00:00 #PBS -l wd ################################################################### ## example PBS script - resource efficient methylation calling pipeline for a dataset with ma...
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#!/bin/bash # Copyright 2021 Huawei Technologies Co., Ltd # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law ...
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#!/usr/bin/env bash # Copyright 2014 Vimal Manohar # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # THIS CODE IS PROVIDED *AS IS* BASIS, WIT...
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#!/bin/bash # Copyright 2012 Brno University of Technology (Author: Karel Vesely) # 2013 Johns Hopkins University (Author: Daniel Povey) # 2015 Vijayaditya Peddinti # 2016 Vimal Manohar # 2017 Pegah Ghahremani # 2020 Ivan Medennikov (STC-innovations Ltd) # Apache ...
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#!/usr/bin/env bash # Self-contained environment for the import-carla-vehicle skill. # Source before the skill's other scripts: source env.sh # # carla-agentic-tools is standalone (not inside a CARLA checkout), so the target # instance is chosen at runtime. Both roots are overridable and must point at a # real, built ...
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#!/usr/bin/env bash set -e # Copyright 2009-2012 Microsoft Corporation Johns Hopkins University (Author: Daniel Povey) # Apache 2.0. # This is modified from the script in standard Kaldi recipe to account # for the way the WSJ data is structured on the Edinburgh systems. # - Arnab Ghoshal, 29/05/12 # Modified from ...
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#!/usr/bin/env bash # Copyright 2014 Vimal Manohar # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # THIS CODE IS PROVIDED *AS IS* BASIS, WIT...
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#!/usr/bin/env bash # Modified from the script for CHiME3 baseline # Copyright 2015, Mitsubishi Electric Research Laboratories, MERL (Author: Takaaki Hori) # Config: order=5 # n-gram order . utils/parse_options.sh || exit 1; . ./path.sh if [ $# -ne 1 ]; then printf "\nUSAGE: %s <CHiME3 root directory>\n\n" `base...
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#!/usr/bin/env bash # Copyright 2014 Pegah Ghahremani # Apache 2.0 #Run supervised and semisupervised BNF training #This yields approx 70 hours of data set -e #Exit on non-zero return code from any command set -o pipefail #Exit if any of the commands in the pipeline will #return non-zero...
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#!/usr/bin/env bash # 1e is as 1d but with more filters and epochs. # local/nnet3/compare.sh exp/resnet1d_cifar10/ exp/resnet1e_cifar10/ # System resnet1d_cifar10 resnet1e_cifar10 # final test accuracy: 0.9537 0.9583 # final train accuracy: 0.9966 0.9994 # final test objf: ...
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#!/usr/bin/env bash # Copyright (c) 2016, Johns Hopkins University ( Yenda Trmal <jtrmal@gmail.com> ) # License: Apache 2.0 # Begin configuration section. stage=2 dir=dev10h.pem # End configuration section . ./conf/common_vars.sh . ./utils/parse_options.sh set -e -o pipefail set -o nounset ...
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########################################################################################## ## UGER job submission script ## run conditional MAGMA analysis for each ASD network (ints vs. non-ints) ## for GWAS traits: ASD ADHD BIP MDD SCZ height ## ## Author: Yu-Han Hsu ###################################################...
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#!/usr/bin/env bash # Copyright (c) 2016, Johns Hopkins University ( Yenda Trmal <jtrmal@gmail.com> ) # License: Apache 2.0 # Begin configuration section. stage=2 dir=dev10h.pem # End configuration section . ./conf/common_vars.sh . ./utils/parse_options.sh set -e -o pipefail set -o nounset ...
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#!/usr/bin/env bash # Copyright 2012 Johns Hopkins University (Author: Guoguo Chen, Yenda Trmal) # Apache 2.0. help_message="$(basename $0): do keyword indexing and search. data-dir is assumed to have kws/ subdirectory that specifies the terms to search for. Output is in decode-d...
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#!/usr/bin/env bash # # Copyright 2017 Johns Hopkins University (Author: Shinji Watanabe, Yenda Trmal) # Apache 2.0 # Begin configuration section. mictype=worn # worn, ref or others cleanup=true # End configuration section . ./utils/parse_options.sh # accept options.. you can run this run.sh with the . ./path.sh ...
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#! /bin/bash # Copyright 2016 Vimal Manohar # Apache 2.0. set -e set -o pipefail echo "$0 $@" # Print the command line for logging noise_word="<NOISE>" spoken_noise_word="<SPOKEN_NOISE>" . utils/parse_options.sh || exit 1; . ./path.sh || exit 1; if [ $# -ne 0 ]; then echo "Usage: $0" exit 1 fi srcdir=data...
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#!/usr/bin/env bash # Copyright 2021 Behavox (author: Hossein Hadian) # Apache 2.0 # Fine tunes a model on new data. This recipe does not add new layers or freeze the # weights. Simple fine tuning. The alignments come from the target GMM model # but the tree is from the source model. # So nothing in the network is r...
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#!/usr/bin/env bash # 1c is as 1b but setting num-minibatches-history=40.0 in the configs, # so the Fisher matrix estimates change less fast. # Seems to be helpfu. # local/nnet3/compare.sh exp/resnet1b_cifar10 exp/resnet1c_cifar10 # System resnet1b_cifar10 resnet1c_cifar10 # final test accuracy: ...
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#!/usr/bin/env bash # 1d is as 1c but adding rotation in image augmentation. # local/nnet3/compare.sh exp/resnet1c_cifar10 exp/resnet1d_cifar10 # System resnet1c_cifar10 resnet1d_cifar10 # final test accuracy: 0.9514 0.9537 # final train accuracy: 1 0.9966...
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# Kaldi ASR baseline for the CHiME-4 Challenge (6ch track: 6 channel track) # # Copyright 2016 University of Sheffield (Jon Barker, Ricard Marxer) # Inria (Emmanuel Vincent) # Mitsubishi Electric Research Labs (Shinji Watanabe) # 2017 JHU CLSP (Szu-Jui Chen) # 2017 JHU ...
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#!/usr/bin/env bash # this is a script to train the nnet3 TDNN acoustic model stage=1 affix= train_stage=-10 reporting_email= common_egs_dir= remove_egs=true egs_stage=0 . ./cmd.sh . ./path.sh . ./utils/parse_options.sh if ! cuda-compiled; then cat <<EOF && exit 1 This script is intended to be used with GPUs bu...
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#!/usr/bin/env bash # # Copyright 2017 Johns Hopkins University (Author: Shinji Watanabe, Yenda Trmal) # Apache 2.0 # Begin configuration section. mictype=worn # worn, ref or others cleanup=true train=true # End configuration section . ./utils/parse_options.sh # accept options.. you can run this run.sh with the ....
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#!/usr/bin/env bash # Run a Scenic scenario against the running CARLA server. # # bash scripts/run_scenic.sh srunner/scenic/carlaChallenge1.scenic # bash scripts/run_scenic.sh carlaChallenge1 # resolved by name # # Knobs (env vars): # COUNT=1 simulations to run (default 1; empty...
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#!/usr/bin/env bash # Copyright 2017 Nagendra Kumar Goel # 2017 Vimal Manohar # 2019 Desh Raj # Apache 2.0 # This script is based on local/run_asr_segmentation.sh script in the # Aspire recipe. It demonstrates nnet3-based speech activity detection for # segmentation. # This script: # 1) Prep...
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#!/bin/bash # call variants with GATK HaplotypeCaller # script filename script_path="${BASH_SOURCE[0]}" script_name=$(basename "$script_path") segment_name=${script_name/%.sh/} echo -e "\n ========== SEGMENT: $segment_name ========== \n" >&2 # check for correct number of arguments if [ ! $# == 4 ] ; then echo -e ...
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#!/usr/bin/env bash # # Based mostly on the TED-LIUM and Switchboard recipe # # Copyright 2017 Johns Hopkins University (Author: Shinji Watanabe and Yenda Trmal) # Apache 2.0 # # This is a subset of run.sh to only perform recognition experiments with evaluation data # Begin configuration section. decode_nj=20 stage=...
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#!/usr/bin/env bash . ./cmd.sh ## You'll want to change cmd.sh to something that will work on your system. ## This relates to the queue. . ./path.sh ## Source the tools/utils (import the queue.pl) dev=data_fbank/dev train=data_fbank/train dev_original=data/dev train_original=data/train gmm=exp/tri5a st...
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#!/usr/bin/env bash # This script is like steps/nnet3/get_egs.sh (it dumps examples for nnet3-based # neural net training), except it is specialized for classification of # fixed-size images (setups like MNIST, CIFAR and ImageNet); and you have to # provide the dev or test data in a separate directory. # Begin confi...
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#!/usr/bin/env bash # # Copyright 2017 Johns Hopkins University (Author: Shinji Watanabe, Yenda Trmal) # Apache 2.0 # Begin configuration section. mictype=worn # worn, ref or others cleanup=true enhanced=false # End configuration section . ./utils/parse_options.sh # accept options.. you can run this run.sh with the...
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#!/bin/bash DATA_NAME=(${@:1:1}) export SUBJECTS_DIR=${HOME}/scratch/${DATA_NAME}_fmriprep_anat_20.2.0/freesurfer-6.0.1 #export SUBJECTS_DIR=/media/vincent/vincent_dat/0_PDET-Project/data/ADNI2_NC/${DATA_NAME}_fmriprep_anat_20.2.0/freesurfer-6.0.1 # for the large ADNI2 NC cohort on the portable hard drive. P_CWD=$PWD O...
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#!/bin/bash # Copyright 2019 David Snyder # 2020 Desh Raj # Apache 2.0. # # This is an example of overlap-aware VB resegmentation. We use the pretrained # Pyannote DIHARD model for overlap detection. We process each array # independently and then combine all the RTTMs using DOVER-Lap. stage=0 nj=10...
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#!/usr/bin/env bash #started from tedlium recipe with few edits set -e -o pipefail -u # First the options that are passed through to run_ivector_common.sh # (some of which are also used in this script directly). stage=0 nj=30 decode_nj=30 min_seg_len=1.55 train_set=train gmm=tri2b # this is the source gmm-dir for ...
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#!/usr/bin/env bash # Copyright 2010-2012 Microsoft Corporation; Arnab Ghoshal # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # THIS CODE ...
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#!/usr/bin/env bash # Copyright Johns Hopkins University (Author: Daniel Povey) 2012. Apache 2.0. # 2014, University of Edinburgh, (Author: Pawel Swietojanski) # 2015, Brno University of Technology (Author: Karel Vesely) # begin configuration section. cmd=run.pl stage=0 decode_mbr=true min_lmwt=7 max_lmwt=15 asclite=...
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#!/usr/bin/env bash set -euo pipefail # This script is called from local/nnet3/run_tdnn.sh and # local/chain/run_tdnn.sh (and may eventually be called by more # scripts). It contains the common feature preparation and # iVector-related parts of the script. See those scripts for examples # of usage. stage=0 nj=56 n...
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#!/usr/bin/env bash # Copyright Johns Hopkins University (Author: Daniel Povey) 2012. Apache 2.0. # 2014, University of Edinburgh, (Author: Pawel Swietojanski) # 2015, Brno University of Technology (Author: Karel Vesely) # begin configuration section. cmd=run.pl stage=0 decode_mbr=true min_lmwt=7 max_lmwt=15 asclite=...
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#!/usr/bin/env bash set -e # Copyright 2009-2012 Microsoft Corporation Johns Hopkins University (Author: Daniel Povey) # Apache 2.0. # This is modified from the script in standard Kaldi recipe to account # for the way the WSJ data is structured on the Edinburgh systems. # - Arnab Ghoshal, 29/05/12 # Modified from ...
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#!/usr/bin/env bash # Copyright 2016 Vincent Nguyen # 2016 Johns Hopkins University (author: Daniel Povey) # 2017 Ashish Arora # 2017 Hossein Hadian # 2018 Desh Raj # Apache 2.0 # # This script trains an LM on the Bentham text corpus and training transcriptions. # It is bas...
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#!/usr/bin/env bash # set -e # Copyright 2014 Johns Hopkins University (Author: Vijayaditya Peddinti) # Apache 2.0. # This script processes RIRs available from available databases into # 8Khz wav files so that these can be used to corrupt the Fisher data. # The databases used are: # RWCP : http://research.nii.ac.jp...
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. ./path.sh min_lmwt=5 max_lmwt=25 cer=0 nbest=-1 cmd=run.pl ntrue_from= . ./utils/parse_options.sh min_lmwt_start=$min_lmwt max_lmwt_start=$max_lmwt datadir=$1; shift name=$1; shift . ./lang.conf set -e set -o pipefail [ ! -d $datadir/compounds/$name ] && echo "Component called $name does not exist in $datadir/co...
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#!/usr/bin/env bash . ./cmd.sh . ./path.sh . ./utils/parse_options.sh stage=0 feat_nj=10 train_nj=10 decode_nj=10 famecorpus=./corpus if [ -d $famecorpus ] ; then echo "Fame corpus present. OK." elif [ -f ./fame.tar.gz ] ; then echo "Unpacking..." tar xzf fame.tar.gz elif [ ! -d $famecorpus ] && [ ! -f ./fame....
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#!/bin/bash # run Picard CollectRnaSeqMetrics # script filename script_path="${BASH_SOURCE[0]}" script_name=$(basename "$script_path") segment_name=${script_name/%.sh/} echo -e "\n ========== SEGMENT: $segment_name ========== \n" >&2 # check for correct number of arguments if [ ! $# == 3 ] ; then echo -e "\n $scr...
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#!/usr/bin/env bash # Copyright 2015 Johns Hopkins University (author: Vijayaditya Peddinti) # Apache 2.0 # This script downloads the impulse responses and noise files from the # Reverb2014 challenge # and converts them to wav files with the required sampling rate #============================================== downl...
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#!/usr/bin/env bash # Copyright 2012 Johns Hopkins University (Author: Guoguo Chen, Yenda Trmal) # Apache 2.0. # Begin configuration section. # case_insensitive=true extraid= min_lmwt=8 max_lmwt=12 cmd=run.pl stage=0 ntrue_from= # End configuration section. help_message="$0: score the kwslist using the F4DE scorer ...
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#!/usr/bin/env bash # # To be run from one directory above this script. ## The input is some directory containing the switchboard-1 release 2 ## corpus (LDC97S62). Note: we don't make many assumptions about how ## you unpacked this. We are just doing a "find" command to locate ## the .sph files. # for example /mnt...
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#!/usr/bin/env bash # # To be run from one directory above this script. ## The input is some directory containing the switchboard-1 release 2 ## corpus (LDC97S62). Note: we don't make many assumptions about how ## you unpacked this. We are just doing a "find" command to locate ## the .sph files. # for example /mnt...
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#!/usr/bin/env bash # Copyright 2012 Arnab Ghoshal # Copyright 2010-2011 Microsoft Corporation # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2....
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#!/usr/bin/env bash # Copyright 2012-2014 Guoguo Chen # Apache 2.0. # Begin configuration section. nj=8 cmd=run.pl beam=-1 # Beam for proxy FST, -1 means no prune phone_beam=-1 # Beam for KxL2xE FST, -1 means no prune nbest=-1 # Use top n best proxy keywords in proxy FST, -1 means all ...
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#!/usr/bin/env bash # Copyright 2012 Johns Hopkins University (Author: Guoguo Chen) # Apache 2.0. # Begin configuration section. silence_word= # Optional silence word to insert (once) between words of the transcript. # End configuration section. echo $0 "$@" [ -f ./path.sh ] && . ./path.sh; # source the path. ....
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#!/usr/bin/env bash set -e # based on run_tdnn_7b.sh in the swbd recipe # configs for 'chain' affix= stage=12 train_stage=-10 get_egs_stage=-10 dir=exp/chain/tdnn_7b decode_iter= # training options num_epochs=4 remove_egs=false common_egs_dir= # End configuration section. echo "$0 $@" # Print the command line for...
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#!/usr/bin/env bash # This script is based on run_tdnn_7h.sh in swbd chain recipe. # exp 2a: change the step of making configs, using xconfig with # minor changes on training configs, referencing wsj # Results: # local/nnet3/compare_wer_general.sh --online exp/nnet3/tdnn_sp_pr43_2a # Model tdnn...
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#!/usr/bin/env bash # shellcheck source=../utils.sh source $( cd -- "$(dirname "$0")" >/dev/null 2>&1 ; pwd -P )/utils.sh # Check if there is input [[ ( $# -eq 0 ) ]] && displayhelp $0 1 # Preparing the default values for variables argsbet="-R -f 0.5 -g 0 -n -m" args3dss="-orig_vol -overwrite" args3dam="" argsfsss="...
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#!/usr/bin/env bash # Install a Blender-backed FBX2OBJ into <carla>/Util/DockerUtils/dist/. # # Replaces `make build.utils`, whose Autodesk FBX SDK download now 403s (see # references/maps.md). Writes two files into dist/ -- gitignored, exactly as the # compiled FBX2OBJ used to be: # # FBX2OBJ shim with th...
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#!/bin/bash -u # Copyright 2012 Arnab Ghoshal # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # THIS CODE IS PROVIDED *AS IS* BASIS, WITHOUT...