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AuxBlocksFooterRMA3.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/rma3/AuxBlocksFooterRMA3.java | /*
* AuxBlocksFooterRMA3.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free... | 3,900 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
IMatch.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/rma3/IMatch.java | /*
* IMatch.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Fou... | 1,160 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
FormatDefinition.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/rma3/FormatDefinition.java | /*
* FormatDefinition.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free So... | 5,497 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
BlastTabMatch.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/rma3/BlastTabMatch.java | /*
* BlastTabMatch.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Softw... | 2,449 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ClassificationViewer.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/ClassificationViewer.java | /*
* ClassificationViewer.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Fre... | 54,650 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
PropertiesWindow.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/PropertiesWindow.java | /*
* PropertiesWindow.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free So... | 4,532 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ViewerBase.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/ViewerBase.java | /*
* ViewerBase.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software... | 23,992 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
LegendPanel.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/LegendPanel.java | /*
* LegendPanel.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Softwar... | 6,236 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
GUIConfiguration.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/GUIConfiguration.java | /*
* GUIConfiguration.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free So... | 7,995 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ClassificationViewerSearcher.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/ClassificationViewerSearcher.java | /*
* ClassificationViewerSearcher.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
*... | 11,219 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
MainViewer.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/MainViewer.java | /*
* MainViewer.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software... | 16,422 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
SyncDataTableAndTaxonomy.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/SyncDataTableAndTaxonomy.java | /*
* SyncDataTableAndTaxonomy.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the... | 9,610 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
MyGraphViewListener.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/MyGraphViewListener.java | /*
* MyGraphViewListener.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free... | 44,062 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
TaxonomicLevels.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/TaxonomicLevels.java | /*
* TaxonomicLevels.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Sof... | 5,797 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
TaxonomyData.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/TaxonomyData.java | /*
* TaxonomyData.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Softwa... | 13,469 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ColorGradient.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/gui/ColorGradient.java | /*
* ColorGradient.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Softw... | 2,650 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
GreenGradient.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/gui/GreenGradient.java | /*
* GreenGradient.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Softw... | 3,638 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
SpiralNode8.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/gui/SpiralNode8.java | /*
* SpiralNode8.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Softwar... | 3,204 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
NodeDrawer.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/gui/NodeDrawer.java | /*
* NodeDrawer.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software... | 27,153 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
MyJTreeCellRender.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/gui/MyJTreeCellRender.java | /*
* MyJTreeCellRender.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free S... | 4,310 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
CircSpiral.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/gui/CircSpiral.java | /*
* CircSpiral.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software... | 3,706 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ViewerJTree.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/gui/ViewerJTree.java | /*
* ViewerJTree.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Softwar... | 10,289 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ViewerJTable.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/gui/ViewerJTable.java | /*
* ViewerJTable.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Softwa... | 13,655 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
CopyImageCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/CopyImageCommand.java | /*
* CopyImageCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free So... | 2,272 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
EditEdgeLabelCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/EditEdgeLabelCommand.java | /*
* EditEdgeLabelCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Fre... | 3,217 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
SelectByRankCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/SelectByRankCommand.java | /*
* SelectByRankCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free... | 3,516 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ShowAlignmentViewerCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/ShowAlignmentViewerCommand.java | /*
* ShowAlignmentViewerCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* t... | 3,999 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
SelectPositiveAssignedCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/SelectPositiveAssignedCommand.java | /*
* SelectPositiveAssignedCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
... | 2,153 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ShowVersionInfoCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/ShowVersionInfoCommand.java | /*
* ShowVersionInfoCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the F... | 2,537 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ExportSegmentationOfReadsCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/ExportSegmentationOfReadsCommand.java | /*
* ExportSegmentationOfReadsCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published b... | 10,472 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
InspectAssignmentsCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/InspectAssignmentsCommand.java | /*
* InspectAssignmentsCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* th... | 4,854 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
PrintCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/PrintCommand.java | /*
* PrintCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Softwa... | 2,873 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
AutoLabelLayoutCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/AutoLabelLayoutCommand.java | /*
* AutoLabelLayoutCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the F... | 2,350 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
OpenClassificationViewerWebPageCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/OpenClassificationViewerWebPageCommand.java | /*
* OpenClassificationViewerWebPageCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as publi... | 3,522 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ExportFrameShiftCorrectedReadsCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/ExportFrameShiftCorrectedReadsCommand.java | /*
* ExportFrameShiftCorrectedReadsCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as publis... | 4,510 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
EditNodeLabelCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/EditNodeLabelCommand.java | /*
* EditNodeLabelCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Fre... | 3,360 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
DrawComparisonOnLeavesOnlyCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/DrawComparisonOnLeavesOnlyCommand.java | /*
* DrawComparisonOnLeavesOnlyCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published ... | 2,514 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
CollapseToTopCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/collapse/CollapseToTopCommand.java | /*
* CollapseToTopCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Fre... | 2,086 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
UncollapseAllNodesCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/collapse/UncollapseAllNodesCommand.java | /*
* UncollapseAllNodesCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* th... | 1,984 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
KeepNonVirusesCollapsedCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/collapse/KeepNonVirusesCollapsedCommand.java | /*
* KeepNonVirusesCollapsedCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
... | 2,124 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
CollapseAllOtherCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/collapse/CollapseAllOtherCommand.java | /*
* CollapseAllOtherCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the ... | 4,115 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
UncollapseSubTreeCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/collapse/UncollapseSubTreeCommand.java | /*
* UncollapseSubTreeCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the... | 2,401 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
UncollapseSelectedNodesCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/collapse/UncollapseSelectedNodesCommand.java | /*
* UncollapseSelectedNodesCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
... | 3,000 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
CollapseAtLevelCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/collapse/CollapseAtLevelCommand.java | /*
* CollapseAtLevelCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the F... | 3,474 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
KeepNonEukaryotesCollapsedCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/collapse/KeepNonEukaryotesCollapsedCommand.java | /*
* KeepNonEukaryotesCollapsedCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published ... | 2,146 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
KeepNonProkaryotesCollapsedCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/collapse/KeepNonProkaryotesCollapsedCommand.java | /*
* KeepNonProkaryotesCollapsedCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published... | 2,469 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
CollapseSelectedNodesCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/collapse/CollapseSelectedNodesCommand.java | /*
* CollapseSelectedNodesCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
*... | 2,767 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
CollapseByRankCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/viewer/commands/collapse/CollapseByRankCommand.java | /*
* CollapseByRankCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Fr... | 4,132 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
LoaderTask.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/LoaderTask.java | /*
* LoaderTask.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software... | 1,041 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
NodeBase.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/NodeBase.java | /*
* NodeBase.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software F... | 2,484 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ReadDataHeadLineNode.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/ReadDataHeadLineNode.java | /*
* ReadDataHeadLineNode.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Fre... | 2,523 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ReadDataTextNode.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/ReadDataTextNode.java | /*
* ReadDataTextNode.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free So... | 1,406 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
MatchHeadLineNode.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/MatchHeadLineNode.java | /*
* MatchHeadLineNode.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free S... | 2,238 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
InspectorWindow.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/InspectorWindow.java | /*
* InspectorWindow.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Sof... | 42,083 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
MatchTextNode.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/MatchTextNode.java | /*
* MatchTextNode.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Softw... | 1,388 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
GUIConfiguration.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/GUIConfiguration.java | /*
* GUIConfiguration.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free So... | 3,068 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
TopLevelNode.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/TopLevelNode.java | /*
* TopLevelNode.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Softwa... | 2,012 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ReadHeadLineNode.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/ReadHeadLineNode.java | /*
* ReadHeadLineNode.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free So... | 2,401 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
Loader.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/Loader.java | /*
* Loader.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Fou... | 3,390 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ExpandNodesCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/commands/ExpandNodesCommand.java | /*
* ExpandNodesCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free ... | 3,855 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
DisableTaxonCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/commands/DisableTaxonCommand.java | /*
* DisableTaxonCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free... | 2,837 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ShowReadsCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/commands/ShowReadsCommand.java | /*
* ShowReadsCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free So... | 5,902 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
PasteCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/commands/PasteCommand.java | /*
* PasteCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Softwa... | 2,010 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
SortReadsAlphabeticallyCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/commands/SortReadsAlphabeticallyCommand.java | /*
* SortReadsAlphabeticallyCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
... | 3,395 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
SelectNoneCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/commands/SelectNoneCommand.java | /*
* SelectNoneCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free S... | 2,359 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ListAsTextCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/commands/ListAsTextCommand.java | /*
* ListAsTextCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free S... | 2,705 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
CollapseNodesCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/commands/CollapseNodesCommand.java | /*
* CollapseNodesCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Fre... | 3,803 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
CopyCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/commands/CopyCommand.java | /*
* CopyCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Softwar... | 2,508 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ShowTaxonCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/commands/ShowTaxonCommand.java | /*
* ShowTaxonCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free So... | 4,488 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
SelectAllCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/commands/SelectAllCommand.java | /*
* SelectAllCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free So... | 2,645 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ClearCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/commands/ClearCommand.java | /*
* ClearCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Softwa... | 3,331 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ExportSelectionCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/commands/ExportSelectionCommand.java | /*
* ExportSelectionCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the F... | 3,534 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
CutCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/inspector/commands/CutCommand.java | /*
* CutCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software... | 2,584 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
FilesPanel.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/FilesPanel.java | /*
* FilesPanel.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software... | 12,375 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
FormatCBox.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/FormatCBox.java | /*
* FormatCBox.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software... | 1,972 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
LCAParametersPanel.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/LCAParametersPanel.java | /*
* LCAParametersPanel.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free ... | 9,588 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ImportBlastDialog.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/ImportBlastDialog.java | /*
* ImportBlastDialog.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free S... | 30,132 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ModeCBox.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/ModeCBox.java | /*
* ModeCBox.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software F... | 1,927 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ReadPairingDialog.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/ReadPairingDialog.java | /*
* ReadPairingDialog.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free S... | 11,121 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ViewerPanel.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/ViewerPanel.java | /*
* ViewerPanel.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Softwar... | 7,992 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ChooseReadsFileCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/commands/ChooseReadsFileCommand.java | /*
* ChooseReadsFileCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the F... | 4,622 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
SetPairedReadsCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/commands/SetPairedReadsCommand.java | /*
* SetPairedReadsCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Fr... | 2,746 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
CommandBase.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/commands/CommandBase.java | /*
* CommandBase.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Softwar... | 1,469 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ChooseMeganFileCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/commands/ChooseMeganFileCommand.java | /*
* ChooseMeganFileCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the F... | 3,642 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
SetAnalyseTaxonomyCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/commands/SetAnalyseTaxonomyCommand.java | /*
* SetAnalyseTaxonomyCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* th... | 1,910 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ListContaminantsCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/commands/ListContaminantsCommand.java | /*
* ListContaminantsCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the ... | 3,686 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
NextTabCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/commands/NextTabCommand.java | /*
* NextTabCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Soft... | 2,219 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
UseContaminantsFilterCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/commands/UseContaminantsFilterCommand.java | /*
* UseContaminantsFilterCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
*... | 2,914 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
SetFastModeCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/commands/SetFastModeCommand.java | /*
* SetFastModeCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free ... | 3,012 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
SetUseIdentityFilterCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/commands/SetUseIdentityFilterCommand.java | /*
* SetUseIdentityFilterCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* ... | 2,505 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
SetUseTextTaxonomyCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/commands/SetUseTextTaxonomyCommand.java | /*
* SetUseTextTaxonomyCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* th... | 2,581 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
SetExtendedModeCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/commands/SetExtendedModeCommand.java | /*
* SetExtendedModeCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the F... | 2,090 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
PreviousTabCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/commands/PreviousTabCommand.java | /*
* PreviousTabCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free ... | 2,192 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
SetLongReadsCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/commands/SetLongReadsCommand.java | /*
* SetLongReadsCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free... | 2,920 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
CancelCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/commands/CancelCommand.java | /*
* CancelCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Softw... | 2,041 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ChooseContaminantsFileCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/commands/ChooseContaminantsFileCommand.java | /*
* ChooseContaminantsFileCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
... | 4,108 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ChooseBlastFileCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/commands/ChooseBlastFileCommand.java | /*
* ChooseBlastFileCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the F... | 5,495 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
ApplyCommand.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/importblast/commands/ApplyCommand.java | /*
* ApplyCommand.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Softwa... | 3,189 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
GUIConfiguration.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/treeviewer/GUIConfiguration.java | /*
* GUIConfiguration.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free So... | 3,023 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
CSVReadsHitsParser.java | /FileExtraction/Java_unseen/husonlab_megan-ce/src/megan/parsers/CSVReadsHitsParser.java | /*
* CSVReadsHitsParser.java Copyright (C) 2024 Daniel H. Huson
*
* (Some files contain contributions from other authors, who are then mentioned separately.)
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free ... | 14,582 | Java | .java | husonlab/megan-ce | 62 | 21 | 18 | 2016-05-09T10:55:38Z | 2024-02-22T23:23:42Z |
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