PDB_ID_chain stringlengths 6 10 | PDB_ID stringlengths 4 4 | Title stringlengths 4 230 | Mutation(s) stringclasses 2
values | Classification stringclasses 305
values | Deposit_date stringdate 1976-03-17 00:00:00 2026-01-20 00:00:00 | Release_date stringdate 1976-05-19 00:00:00 2026-02-25 00:00:00 | Method stringclasses 5
values | Resolution stringclasses 459
values | R_free stringclasses 227
values | R_work stringclasses 211
values | PMID stringlengths 4 8 | DOI stringlengths 4 68 | Model_index int64 0 76 | Asym_ID_type stringclasses 2
values | Ab_type stringclasses 30
values | H_subgroup stringclasses 8
values | L_subgroup stringclasses 19
values | H_chain_ID stringclasses 60
values | L_chain_ID stringclasses 58
values | H_fas_seq stringlengths 4 919 | L_fas_seq stringlengths 4 627 | H_filled_pdb_seq stringlengths 4 896 | L_filled_pdb_seq stringlengths 4 523 | H_mean_radius float64 0 79.7 | L_mean_radius float64 0 84.3 | H_fas_seq_len int64 0 919 | L_fas_seq_len int64 0 627 | H_pdb_seq_len int64 0 879 | L_pdb_seq_len int64 0 523 | H_filled_seq_len int64 0 896 | L_filled_seq_len int64 0 523 | HL_inf_res_num int64 0 175 | H_mol_name stringlengths 2 331 | L_mol_name stringlengths 2 151 | H_species stringclasses 68
values | L_species stringclasses 42
values | Ag_chain_ID(s) stringclasses 279
values | Ag_type(s) stringclasses 16
values | Ag_mol_name(s) stringlengths 2 390 | Ag_species stringclasses 743
values | Ab_ag_inf_res_num stringlengths 1 11 | CDR_inf_res_num stringclasses 444
values | CDR_inf_res_ratio stringlengths 1 19 | hl_label stringclasses 3
values | split stringclasses 1
value |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
8pm2_N | 8pm2 | structure of the murine trace amine-associated receptor taar7f bound to n,n-dimethylcyclohexylamine (dmch) in complex with mini-gs trimeric g protein | yes | membrane protein | 2023-06-28 | 2023-08-09 | electron microscopy | 2.92 | N.A. | N.A. | 37461561 | 10.1101/2023.07.07.547762 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | 13.64318 | 0 | 156 | 0 | 126 | 0 | 126 | 0 | 0 | nanobody 35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 43;33 | 12;12 | 0.57;0.71 | H_only | train |
8tb0_F | 8tb0 | cryo-em structure of gpr61-g protein complex stabilized by scfv16 | no | signaling protein | 2023-06-28 | 2023-10-04 | electron microscopy | 3.47 | N.A. | N.A. | 37741852 | 10.1038/s41467-023-41646-3 | 0 | auth_asym_id | scFv | N.A. | N.A. | F | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKGSLEVLFQGPAAAHHHHHHHH | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.69051 | 0 | 269 | 0 | 233 | 0 | 247 | 0 | 0 | single-chain fv16 | N.A. | homo sapiens | N.A. | R;B | protein;protein | gpr61 fused to dominant negative g alpha s/i n18 chimera;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | escherichia coli;homo sapiens | 31;22 | 18;10 | 0.9;0.83 | H_only | train |
8tb7_N | 8tb7 | cryo-em structure of gpr61- | no | signaling protein | 2023-06-28 | 2023-10-04 | electron microscopy | 2.94 | N.A. | N.A. | 37741852 | 10.1038/s41467-023-41646-3 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | GSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS | N.A. | 13.744191 | 0 | 122 | 0 | 117 | 0 | 119 | 0 | 0 | fab hinge-binding nanobody | N.A. | lama glama | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
8tb7_H_L | 8tb7 | cryo-em structure of gpr61- | no | signaling protein | 2023-06-28 | 2023-10-04 | electron microscopy | 2.94 | N.A. | N.A. | 37741852 | 10.1038/s41467-023-41646-3 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | MKKNIAFLLASMFVFSIATNAYASDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEMKKNIAFLLASMFVFSIATNAYAEISEVQLVESGGGLVQPGGSLRLSCAASGFNVRSFSIHWVRQAPGKGLEWVAYISSSSG... | MDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | EVQLVESGGGLVQPGGSLRLSCAASGFNVRSFSIHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 23.901148 | 23.278894 | 490 | 214 | 222 | 212 | 225 | 212 | 94 | fab24 bak5 heavy chain | fab24 bak5 light chain | homo sapiens | homo sapiens | R | protein | g-protein coupled receptor 61,soluble cytochrome b562 | homo sapiens | 38 | 16 | 0.84 | HL | train |
8jva_B_A | 8jva | cryo-em structure of the n-terminal domain of omicron ba.1 in complex with nanobody n235 and s2l20 fab | yes | viral protein/immune system | 2023-06-28 | 2024-05-22 | electron microscopy | 2.81 | N.A. | N.A. | 38740785 | 10.1038/s41392-024-01847-8 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | B | A | METDTLLLWVLLLWVPGSTGDEVQLVESGGGVVQPGGSLRLSCAASGFTFNSYGMHWVRQAPGKGLEWVAFIRYDGGNKYYADSVKGRFTISRDNSKNTLYLQMKSLRAEDTAVYYCANLKDSRYSGSYYDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREE... | METDTLLLWVLLLWVPGSTGDVIWMTQSPSSLSASVGDRVTITCQASQDIRFYLNWYQQKPGKAPKLLISDASNMETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPFTFGPGTKVDFKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | EVQLVESGGGVVQPGGSLRLSCAASGFTFNSYGMHWVRQAPGKGLEWVAFIRYDGGNKYYADSVKGRFTISRDNSKNTLYLQMKSLRAEDTAVYYCANLKDSRYSGSYYDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL | VIWMTQSPSSLSASVGDRVTITCQASQDIRFYLNWYQQKPGKAPKLLISDASNMETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPFTFGPGTKVDFKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 21.96174 | 23.492224 | 473 | 236 | 193 | 213 | 198 | 213 | 93 | s2l20 heavy chain | s2l20 light chain | homo sapiens | homo sapiens | F | protein | spike protein s2' | severe acute respiratory syndrome coronavirus 2 | 46 | 22 | 0.85 | HL | train |
8jva_D | 8jva | cryo-em structure of the n-terminal domain of omicron ba.1 in complex with nanobody n235 and s2l20 fab | yes | viral protein/immune system | 2023-06-28 | 2024-05-22 | electron microscopy | 2.81 | N.A. | N.A. | 38740785 | 10.1038/s41392-024-01847-8 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGLIISRYDMSWYRQAPGKERELVATTPIPAARPQYADSVKGRFTISRDNAKNTVSLQMNSLKPEDTAVYYCNLGPESQDHNYNYWGQGTQVTVSSHHHHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGLIISRYDMSWYRQAPGKERELVATTPIPAARPQYADSVKGRFTISRDNAKNTVSLQMNSLKPEDTAVYYCNLGPESQDHNYNYWGQGTQVTVSS | N.A. | 14.170688 | 0 | 126 | 0 | 120 | 0 | 120 | 0 | 0 | nanobody n235 | N.A. | vicugna pacos | N.A. | F | protein | spike protein s2' | severe acute respiratory syndrome coronavirus 2 | 37 | 14 | 0.78 | H_only | train |
8tbb_H_L | 8tbb | f9s, novel tim-3 targeting antibody, bound to igv domain of tim-3 | no | immune system | 2023-06-28 | 2024-08-28 | x-ray diffraction | 2.5 | 0.241 | 0.191 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYHMSWVRQAPGKGLEWVSAISGSGRSYYYKDSFFGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCATSWETARILPGAFDIWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | DIQLTQSPSFLSASVGDRVTITCRTSQDTNSYLAWYQQKPGKAPKLLIYAASVLLSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLASSPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYHMSWVRQAPGKGLEWVSAISGSGRSYYYKDSFFGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCATSWETARILPGAFDIWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | DIQLTQSPSFLSASVGDRVTITCRTSQDTNSYLAWYQQKPGKAPKLLIYAASVLLSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLASSPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 20.568657 | 22.745962 | 226 | 214 | 219 | 214 | 223 | 214 | 94 | f9s fab heavy chain | f9s fab light chain | homo sapiens | homo sapiens | D | protein | t-cell immunoglobulin mucin receptor 3 | homo sapiens | 51 | 20 | 0.77 | HL | train |
8tbq_H_L | 8tbq | the crystal structure of human vista extra cellular domain in complex with fab fragment of ph-selective anti-vista antibody | no | protein binding,immune system | 2023-06-29 | 2024-03-20 | x-ray diffraction | 2.59 | 0.291 | 0.237 | 38575562 | 10.1038/s41467-024-47256-x | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLVQPGGSLRLSCAASGFTFDDYSMNWVRQAPGKGLEWVSYISSDADTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAREAGGVLGRVDFQHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH | DIQLTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLGTGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQADFVPPWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFTFDDYSMNWVRQAPGKGLEWVSYISSDADTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAREAGGVLGRVDFQHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQLTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLGTGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQADFVPPWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 21.335625 | 23.44818 | 229 | 215 | 223 | 214 | 223 | 214 | 98 | sns-101 fab heavy chain | sns-101 fab light chain | homo sapiens | homo sapiens | P | protein | v-type immunoglobulin domain-containing suppressor of t-cell activation | homo sapiens | 51 | 21 | 0.88 | HL | train |
8tbq_A_B | 8tbq | the crystal structure of human vista extra cellular domain in complex with fab fragment of ph-selective anti-vista antibody | no | protein binding,immune system | 2023-06-29 | 2024-03-20 | x-ray diffraction | 2.59 | 0.291 | 0.237 | 38575562 | 10.1038/s41467-024-47256-x | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | A | B | EVQLVESGGGLVQPGGSLRLSCAASGFTFDDYSMNWVRQAPGKGLEWVSYISSDADTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAREAGGVLGRVDFQHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH | DIQLTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLGTGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQADFVPPWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFTFDDYSMNWVRQAPGKGLEWVSYISSDADTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCAREAGGVLGRVDFQHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQLTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLGTGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQADFVPPWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTK | 20.698809 | 21.039831 | 229 | 215 | 213 | 181 | 223 | 208 | 94 | sns-101 fab heavy chain | sns-101 fab light chain | homo sapiens | homo sapiens | Q | protein | v-type immunoglobulin domain-containing suppressor of t-cell activation | homo sapiens | 48 | 18 | 0.82 | HL | train |
8pmw_G_H | 8pmw | hev gt3 p domain in complex with glycan-sensitive nab p60.1 | no | viral protein | 2023-06-29 | 2024-07-10 | x-ray diffraction | 1.98 | 0.227 | 0.206 | 40011441 | 10.1038/s41467-025-57182-1 | 0 | auth_asym_id | VH:VL | IGHV6 | IGKV1 | G | H | EVQLQQSGPGLVKPSQTLSLICAISGDSVSTINAAWNWIRQSPSRGLEWLGRTYYRSKWYHEYATSVQGRIIITPDTSKNQFSLQLNSVTPEDSAVYFCARDRGPTPFDFWGQGTLVTVSSGTGGSGGGGSGGGGSGGGDIQMTQSPSSLSASVGDSVTITCRANQSISRSLNWYQQQPGKAPNLLIYAASHLHSGVSSRFSGSGSGADFALTISSLQPEDFATYHCQQSFVTPFTFGPGTKVDLKDDDDK | EVQLQQSGPGLVKPSQTLSLICAISGDSVSTINAAWNWIRQSPSRGLEWLGRTYYRSKWYHEYATSVQGRIIITPDTSKNQFSLQLNSVTPEDSAVYFCARDRGPTPFDFWGQGTLVTVSSGTGGSGGGGSGGGGSGGGDIQMTQSPSSLSASVGDSVTITCRANQSISRSLNWYQQQPGKAPNLLIYAASHLHSGVSSRFSGSGSGADFALTISSLQPEDFATYHCQQSFVTPFTFGPGTKVDLKDDDDK | EVQLQQSGPGLVKPSQTLSLICAISGDSVSTINAAWNWIRQSPSRGLEWLGRTYYRSKWYHEYATSVQGRIIITPDTSKNQFSLQLNSVTPEDSAVYFCARDRGPTPFDFWGQGTLVTV | DIQMTQSPSSLSASVGDSVTITCRANQSISRSLNWYQQQPGKAPNLLIYAASHLHSGVSSRFSGSGSGADFALTISSLQPEDFATYHCQQSFVTPFTFGPGTKVDLK | 13.657318 | 13.049624 | 251 | 251 | 119 | 107 | 119 | 107 | 41 | scfv_p60.1 | scfv_p60.1 | homo sapiens | homo sapiens | D | protein | capsid protein | hepatitis e virus | 41 | 20 | 0.87 | HL | train |
8pmw_B_A | 8pmw | hev gt3 p domain in complex with glycan-sensitive nab p60.1 | no | viral protein | 2023-06-29 | 2024-07-10 | x-ray diffraction | 1.98 | 0.227 | 0.206 | 40011441 | 10.1038/s41467-025-57182-1 | 0 | auth_asym_id | VH:VL | IGHV6 | IGKV1 | B | A | EVQLQQSGPGLVKPSQTLSLICAISGDSVSTINAAWNWIRQSPSRGLEWLGRTYYRSKWYHEYATSVQGRIIITPDTSKNQFSLQLNSVTPEDSAVYFCARDRGPTPFDFWGQGTLVTVSSGTGGSGGGGSGGGGSGGGDIQMTQSPSSLSASVGDSVTITCRANQSISRSLNWYQQQPGKAPNLLIYAASHLHSGVSSRFSGSGSGADFALTISSLQPEDFATYHCQQSFVTPFTFGPGTKVDLKDDDDK | EVQLQQSGPGLVKPSQTLSLICAISGDSVSTINAAWNWIRQSPSRGLEWLGRTYYRSKWYHEYATSVQGRIIITPDTSKNQFSLQLNSVTPEDSAVYFCARDRGPTPFDFWGQGTLVTVSSGTGGSGGGGSGGGGSGGGDIQMTQSPSSLSASVGDSVTITCRANQSISRSLNWYQQQPGKAPNLLIYAASHLHSGVSSRFSGSGSGADFALTISSLQPEDFATYHCQQSFVTPFTFGPGTKVDLKDDDDK | EVQLQQSGPGLVKPSQTLSLICAISGDSVSTINAAWNWIRQSPSRGLEWLGRTYYRSKWYHEYATSVQGRIIITPDTSKNQFSLQLNSVTPEDSAVYFCARDRGPTPFDFWGQGTLVTVS | DIQMTQSPSSLSASVGDSVTITCRANQSISRSLNWYQQQPGKAPNLLIYAASHLHSGVSSRFSGSGSGADFALTISSLQPEDFATYHCQQSFVTPFTFGPGTKVDLK | 13.707519 | 13.029163 | 251 | 251 | 120 | 107 | 120 | 107 | 43 | scfv_p60.1 | scfv_p60.1 | homo sapiens | homo sapiens | E | protein | capsid protein | hepatitis e virus | 41 | 20 | 0.87 | HL | train |
8pmx_H_L | 8pmx | rat hev p domain in complex with glycan-sensitive nab p60.12 | no | viral protein | 2023-06-29 | 2024-07-10 | x-ray diffraction | 3.92 | 0.361 | 0.3 | 40011441 | 10.1038/s41467-025-57182-1 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGLV2 | H | L | QVQLVQSGAEVKKPGSSVKVSCKASGDTFSSYVISWVRQAPGQGLEWMGGIIPIIGTANYAPKFQDTVTITADKSTNTVYMEMRSLRSEDTAVYYCASNVQLQRRGNWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTDDDDK | QSALTQPASVSGSPGQSITISCTGTSSDIGDYNFVSWYQQHPGKAPKLMIFDVTNRPSGVSNRFSGSKSGNTASLTISGLQVEDEADYYCSSYTSTNTPVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLVQSGAEVKKPGSSVKVSCKASGDTFSSYVISWVRQAPGQGLEWMGGIIPIIGTANYAPKFQDTVTITADKSTNTVYMEMRSLRSEDTAVYYCASNVQLQRRGNWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | ALTQPASVSGSPGQSITISCTGTSSDIGDYNFVSWYQQHPGKAPKLMIFDVTNRPSGVSNRFSGSKSGNTASLTISGLQVEDEADYYCSSYTSTNTPVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE | 22.945553 | 22.49791 | 233 | 217 | 214 | 213 | 223 | 213 | 97 | fab p60.12-hc | fab p60.12-lc | homo sapiens | homo sapiens | A;B | protein;protein | pro-secreted protein orf2;pro-secreted protein orf2 | hepatitis e virus rat/r63/deu/2009;hepatitis e virus rat/r63/deu/2009 | 38;17 | 16;8 | 0.8;0.89 | HL | train |
8pmy_A_L | 8pmy | hev gt3 p domain in complex with glycan-insensitive nab p60.15 | no | viral protein | 2023-06-29 | 2024-07-10 | x-ray diffraction | 2.41 | 0.25 | 0.212 | 40011441 | 10.1038/s41467-025-57182-1 | 0 | auth_asym_id | VH:VL | IGHV5 | IGKV1 | A | L | EVQLVQSGAELKKPGESLRISCKGSGYDFANYWIGWVRQMPGKGLEWMGIIYPRDSDIRYSPSFQGQVTISADKSISTAYLQLSSLKASDTAMYYCARHLRGLRLGELFPFDYWGQGTLVTVSSGTGGSGGGGSGGGGSGGGAIQLTQSPSSLSASVGDSVTITCRASQDIFSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQLNRYPFAFGPGTKVDIKDDDDK | EVQLVQSGAELKKPGESLRISCKGSGYDFANYWIGWVRQMPGKGLEWMGIIYPRDSDIRYSPSFQGQVTISADKSISTAYLQLSSLKASDTAMYYCARHLRGLRLGELFPFDYWGQGTLVTVSSGTGGSGGGGSGGGGSGGGAIQLTQSPSSLSASVGDSVTITCRASQDIFSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQLNRYPFAFGPGTKVDIKDDDDK | EVQLVQSGAELKKPGESLRISCKGSGYDFANYWIGWVRQMPGKGLEWMGIIYPRDSDIRYSPSFQGQVTISADKSISTAYLQLSSLKASDTAMYYCARHLRGLRLGELFPFDYWGQGTLVTVS | AIQLTQSPSSLSASVGDSVTITCRASQDIFSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQLNRYPFAFGPGTKVDI | 13.808686 | 13.083365 | 254 | 254 | 123 | 106 | 123 | 106 | 45 | scfv_p60.15 | scfv_p60.15 | homo sapiens | homo sapiens | B | protein | capsid protein | paslahepevirus balayani | 41 | 19 | 0.9 | HL | train |
8pnl_B | 8pnl | outward-open conformation of a major facilitator superfamily (mfs) transporter mhas2168, a homologue of rv1410 from m. tuberculosis, in complex with an alpaca nanobody | no | transport protein | 2023-06-30 | 2023-10-18 | x-ray diffraction | 2.7 | 0.291 | 0.245 | 37833269 | 10.1038/s41467-023-42073-0 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | GPSQGQLVESGGGLVQPGGSLRLSCADAGSIFNKFPMAWYRQAPGKERELVARISSGGSTNYADFVKGRFTISRDNAKSTLYLQMNSLKPEDTAMYYCARIINSASNIAYWGQGTRVTVSA | N.A. | QGQLVESGGGLVQPGGSLRLSCADAGSIFNKFPMAWYRQAPGKERELVARISSGGSTNYADFVKGRFTISRDNAKSTLYLQMNSLKPEDTAMYYCARIINSASNIAYWGQGTRVTV | N.A. | 13.132474 | 0 | 121 | 0 | 111 | 0 | 116 | 0 | 0 | nb_h2 | N.A. | vicugna pacos | N.A. | A | protein | putative triacylglyceride transporter | mycolicibacterium hassiacum dsm 44199 | 59 | 12 | 0.44 | H_only | train |
8pnl_D | 8pnl | outward-open conformation of a major facilitator superfamily (mfs) transporter mhas2168, a homologue of rv1410 from m. tuberculosis, in complex with an alpaca nanobody | no | transport protein | 2023-06-30 | 2023-10-18 | x-ray diffraction | 2.7 | 0.291 | 0.245 | 37833269 | 10.1038/s41467-023-42073-0 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | GPSQGQLVESGGGLVQPGGSLRLSCADAGSIFNKFPMAWYRQAPGKERELVARISSGGSTNYADFVKGRFTISRDNAKSTLYLQMNSLKPEDTAMYYCARIINSASNIAYWGQGTRVTVSA | N.A. | GQLVESGGGLVQPGGSLRLSCADAGSIFNKFPMAWYRQAPGKERELVARISSGGSTNYADFVKGRFTISRDNAKSTLYLQMNSLKPEDTAMYYCARIINSASNIAYWGQGTRVTV | N.A. | 13.12374 | 0 | 121 | 0 | 110 | 0 | 115 | 0 | 0 | nb_h2 | N.A. | vicugna pacos | N.A. | C | protein | putative triacylglyceride transporter | mycolicibacterium hassiacum dsm 44199 | 56 | 12 | 0.48 | H_only | train |
8tca_H_L | 8tca | structure of a mouse igg antibody antigen-binding fragment (fab) targeting n6-methyladenosine (m6a), an rna modification, no ligand | no | immune system | 2023-06-30 | 2024-02-07 | x-ray diffraction | 2.02 | 0.224 | 0.181 | 40066880 | 10.1093/nar/gkaf166 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV7 | H | L | EVKLEESGGGLVQPGGSMKLSCVASGFSFTNYWMNWVRQSPEKGLEWVAEISLKSSNYVTYYAESVKGRFTISSDKSKRSVYLQMNNLRAEDTGIYFCSLWQTWFAYWGQGTLVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCG | QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTDDEAIYFCALWYSNHLVFGGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHTVEKSLSRADCS | EVKLEESGGGLVQPGGSMKLSCVASGFSFTNYWMNWVRQSPEKGLEWVAEISLKSSNYVTYYAESVKGRFTISSDKSKRSVYLQMNNLRAEDTGIYFCSLWQTWFAYWGQGTLVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR | QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTDDEAIYFCALWYSNHLVFGGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHTVEKSLSRAD | 21.171309 | 22.513569 | 221 | 215 | 212 | 213 | 218 | 213 | 99 | m6a binding igg fab, heavy chain | m6a binding igg fab, light chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8jxt_E | 8jxt | histamine-bound h4r/gi complex | yes | membrane protein | 2023-07-01 | 2024-03-20 | electron microscopy | 3.07 | N.A. | N.A. | 38509098 | 10.1038/s41467-024-46840-5 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.888443 | 0 | 247 | 0 | 230 | 0 | 247 | 0 | 0 | scfv16 | N.A. | homo sapiens | N.A. | B;C | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 30;18 | 17;7 | 0.94;0.88 | H_only | train |
8jxr_B | 8jxr | structure of nanobody-bound drd1_lsd complex | yes | membrane protein | 2023-07-01 | 2024-09-04 | electron microscopy | 3.57 | N.A. | N.A. | 39094559 | 10.1016/j.neuron.2024.07.003 | 0 | auth_asym_id | VH | IGHV3 | N.A. | B | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFALNIMGWYRQAPGKQRELVAAIHSGGTTNYANSVKGRFTISRDNAANTVYLQMNSLKPEDTAVYYCNVKDFGAIVADRDYWGQGTQVTVSSLEHHH | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFALNIMGWYRQAPGKQRELVAAIHSGGTTNYANSVKGRFTISRDNAANTVYLQMNSLKPEDTAVYYCNVKDFGAIVADRDYWGQGTQVTVSSLEHH | N.A. | 15.030527 | 0 | 125 | 0 | 124 | 0 | 124 | 0 | 0 | nba3 | N.A. | homo sapiens | N.A. | A | protein | d(1a) dopamine receptor | homo sapiens | 48 | 17 | 0.74 | H_only | train |
8jxr_H_L | 8jxr | structure of nanobody-bound drd1_lsd complex | yes | membrane protein | 2023-07-01 | 2024-09-04 | electron microscopy | 3.57 | N.A. | N.A. | 39094559 | 10.1016/j.neuron.2024.07.003 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV4 | H | L | MDWTWRVFCLLAVAPGAHSDVQLVESGGGLVQPGKSLRLSCAASGFTFSNFGMHWVRQAPEMGLEWVAYISSGSTTKYYGDTVKGRFTISRDNPKNTLYLQMNSLRSEDTAMYYCARRPLYDGDYGYPMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHH | MVLQTQVFISLLLWISGAYGNIMLTQSPSSLAVSAGERVTMSCKSTQSILYNSNQKTYLAWYQQKPGQSPKLLIYWASTRASGVPDRFTGSGSGTDFTLTINSVQPEDLAVYYCHQYLSAWTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | DVQLVESGGGLVQPGKSLRLSCAASGFTFSNFGMHWVRQAPEMGLEWVAYISSGSTTKYYGDTVKGRFTISRDNPKNTLYLQMNSLRSEDTAMYYCARRPLYDGDYGYPMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK | NIMLTQSPSSLAVSAGERVTMSCKSTQSILYNSNQKTYLAWYQQKPGQSPKLLIYWASTRASGVPDRFTGSGSGTDFTLTINSVQPEDLAVYYCHQYLSAWTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTL | 19.690268 | 21.032005 | 253 | 239 | 202 | 171 | 220 | 184 | 90 | fab 8d3 heavy chain | fab 8d3 light chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8jxs_B | 8jxs | structure of nanobody-bound drd1_pf-6142 complex | yes | membrane protein | 2023-07-01 | 2024-09-04 | electron microscopy | 3 | N.A. | N.A. | 39094559 | 10.1016/j.neuron.2024.07.003 | 0 | auth_asym_id | VH | IGHV3 | N.A. | B | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFALNIMGWYRQAPGKQRELVAAIHSGGTTNYANSVKGRFTISRDNAANTVYLQMNSLKPEDTAVYYCNVKDFGAIVADRDYWGQGTQVTVSSLEHHH | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFALNIMGWYRQAPGKQRELVAAIHSGGTTNYANSVKGRFTISRDNAANTVYLQMNSLKPEDTAVYYCNVKDFGAIVADRDYWGQGTQVTVSSLEHH | N.A. | 15.016606 | 0 | 125 | 0 | 124 | 0 | 124 | 0 | 0 | nba3 | N.A. | homo sapiens | N.A. | A | protein | d(1a) dopamine receptor | homo sapiens | 50 | 17 | 0.74 | H_only | train |
8jxs_H_L | 8jxs | structure of nanobody-bound drd1_pf-6142 complex | yes | membrane protein | 2023-07-01 | 2024-09-04 | electron microscopy | 3 | N.A. | N.A. | 39094559 | 10.1016/j.neuron.2024.07.003 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV4 | H | L | MDWTWRVFCLLAVAPGAHSDVQLVESGGGLVQPGKSLRLSCAASGFTFSNFGMHWVRQAPEMGLEWVAYISSGSTTKYYGDTVKGRFTISRDNPKNTLYLQMNSLRSEDTAMYYCARRPLYDGDYGYPMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHH | MVLQTQVFISLLLWISGAYGNIMLTQSPSSLAVSAGERVTMSCKSTQSILYNSNQKTYLAWYQQKPGQSPKLLIYWASTRASGVPDRFTGSGSGTDFTLTINSVQPEDLAVYYCHQYLSAWTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | DVQLVESGGGLVQPGKSLRLSCAASGFTFSNFGMHWVRQAPEMGLEWVAYISSGSTTKYYGDTVKGRFTISRDNPKNTLYLQMNSLRSEDTAMYYCARRPLYDGDYGYPMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK | NIMLTQSPSSLAVSAGERVTMSCKSTQSILYNSNQKTYLAWYQQKPGQSPKLLIYWASTRASGVPDRFTGSGSGTDFTLTINSVQPEDLAVYYCHQYLSAWTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTL | 19.676907 | 21.06307 | 253 | 239 | 202 | 171 | 220 | 184 | 86 | fab 8d3 heavy chain | fab 8d3 light chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8tco_E_D | 8tco | hcmv trimer in complex with cs2it1p2_f7k fab and cs4tt1p1_e3k fab | no | viral protein/immune system | 2023-07-02 | 2023-08-09 | electron microscopy | 2.8 | N.A. | N.A. | 37967532 | 10.1016/j.immuni.2023.10.009 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | E | D | EVRLVESGGGFVQTGGSLRLSCAASGYTFDQYSMHWVRQVPGKGLQFVSTISSNGGSRYYADSVKGRFVVSRDEEKEVLYLQMGRLRTDDTGIYFCARAKKIFGGIIPPSGMDVWGRGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | DIQLTQSPSSLSASVGDRVTITCRASQNIYNWLAWYQQKPGQAPKLLIFDASTLEGGVPSRFGGSGSGTDFTLTISNLRPEDFATYFCQHYYNYPPWTFGQGTKVTFRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VRLVESGGGFVQTGGSLRLSCAASGYTFDQYSMHWVRQVPGKGLQFVSTISSNGGSRYYADSVKGRFVVSRDEEKEVLYLQMGRLRTDDTGIYFCARAKKIFGGIIPPSGMDVWGRGTTVTVSS | DIQLTQSPSSLSASVGDRVTITCRASQNIYNWLAWYQQKPGQAPKLLIFDASTLEGGVPSRFGGSGSGTDFTLTISNLRPEDFATYFCQHYYNYPPWTFGQGTKVTFR | 13.962164 | 13.637246 | 226 | 215 | 124 | 108 | 124 | 108 | 48 | cs4tt1p1_e3k fab heavy chain | cs4tt1p1_e3k fab light chain | homo sapiens | homo sapiens | A;B | protein;protein | envelope glycoprotein h;envelope glycoprotein l | human betaherpesvirus 5;human betaherpesvirus 5 | 24;20 | 7;12 | 0.64;1.0 | HL | train |
8tco_F_G | 8tco | hcmv trimer in complex with cs2it1p2_f7k fab and cs4tt1p1_e3k fab | no | viral protein/immune system | 2023-07-02 | 2023-08-09 | electron microscopy | 2.8 | N.A. | N.A. | 37967532 | 10.1016/j.immuni.2023.10.009 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | F | G | QVQLVQSGAEVKKPGASVRVSCKVSGYTLTDLSIHWVRQAPGKGLEWMGGFDPEHGEIMYAQKFQGRVTVTEDTSTHTTYMEVNSLRSEDTAVYYCATDSSIAMTGTYFSDLFALDVWGQGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | MRLPAQLLGLLLLWLRGARCDIQMTQSPSSLSASVGDRVTITCRASQTINTNLNWYQQKPGKAPRLLIFGTFSLKSGVPSRFSGGGSGTDFTLTISSLQPEDFAAYFCQQSHSPPHTFGQGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVRVSCKVSGYTLTDLSIHWVRQAPGKGLEWMGGFDPEHGEIMYAQKFQGRVTVTEDTSTHTTYMEVNSLRSEDTAVYYCATDSSIAMTGTYFSDLFALDVWGQGTTVIVSS | IQMTQSPSSLSASVGDRVTITCRASQTINTNLNWYQQKPGKAPRLLIFGTFSLKSGVPSRFSGGGSGTDFTLTISSLQPEDFAAYFCQQSHSPPHTFGQGTKLELK | 14.562917 | 13.101754 | 229 | 234 | 128 | 106 | 128 | 106 | 43 | cs2it1p2_f7k fab heavy chain | cs2it1p2_f7k fab light chain | homo sapiens | homo sapiens | C | protein | envelope glycoprotein o | human betaherpesvirus 5 | 54 | 22 | 0.85 | HL | train |
8pnu_D | 8pnu | cryo-em structure of styrene oxide isomerase bound to benzylamine inhibitor | no | membrane protein | 2023-07-02 | 2024-04-03 | electron microscopy | 2.12 | N.A. | N.A. | 38744914 | 10.1038/s41557-024-01523-y | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | AQGQLVESGGGLVQAGGSLRLSCTGSGRAFVTPAVGWFRQAPGKEREFVGTINWSGSHTSYADPVKGRFTISRDNAKETVYLQMNNLKPEDADVYYCASRGVSGRYEYWGKGTPVTVSSHHHHHHEPEA | N.A. | QLVESGGGLVQAGGSLRLSCTGSGRAFVTPAVGWFRQAPGKEREFVGTINWSGSHTSYADPVKGRFTISRDNAKETVYLQMNNLKPEDADVYYCASRGVSGRYEYWGKGTPVTVSS | N.A. | 13.676996 | 0 | 129 | 0 | 116 | 0 | 116 | 0 | 0 | nanobody | N.A. | vicugna pacos | N.A. | A | protein | styrene oxide isomerase | pseudomonas sp. vlb120 | 26 | 13 | 0.93 | H_only | train |
8pnu_E | 8pnu | cryo-em structure of styrene oxide isomerase bound to benzylamine inhibitor | no | membrane protein | 2023-07-02 | 2024-04-03 | electron microscopy | 2.12 | N.A. | N.A. | 38744914 | 10.1038/s41557-024-01523-y | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | AQGQLVESGGGLVQAGGSLRLSCTGSGRAFVTPAVGWFRQAPGKEREFVGTINWSGSHTSYADPVKGRFTISRDNAKETVYLQMNNLKPEDADVYYCASRGVSGRYEYWGKGTPVTVSSHHHHHHEPEA | N.A. | QLVESGGGLVQAGGSLRLSCTGSGRAFVTPAVGWFRQAPGKEREFVGTINWSGSHTSYADPVKGRFTISRDNAKETVYLQMNNLKPEDADVYYCASRGVSGRYEYWGKGTPVTVSS | N.A. | 13.676982 | 0 | 129 | 0 | 116 | 0 | 116 | 0 | 0 | nanobody | N.A. | vicugna pacos | N.A. | A;B | protein;protein | styrene oxide isomerase;styrene oxide isomerase | pseudomonas sp. vlb120;pseudomonas sp. vlb120 | 13;26 | 5;13 | 1.0;0.93 | H_only | train |
8pnu_F | 8pnu | cryo-em structure of styrene oxide isomerase bound to benzylamine inhibitor | no | membrane protein | 2023-07-02 | 2024-04-03 | electron microscopy | 2.12 | N.A. | N.A. | 38744914 | 10.1038/s41557-024-01523-y | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | AQGQLVESGGGLVQAGGSLRLSCTGSGRAFVTPAVGWFRQAPGKEREFVGTINWSGSHTSYADPVKGRFTISRDNAKETVYLQMNNLKPEDADVYYCASRGVSGRYEYWGKGTPVTVSSHHHHHHEPEA | N.A. | QLVESGGGLVQAGGSLRLSCTGSGRAFVTPAVGWFRQAPGKEREFVGTINWSGSHTSYADPVKGRFTISRDNAKETVYLQMNNLKPEDADVYYCASRGVSGRYEYWGKGTPVTVSS | N.A. | 13.676995 | 0 | 129 | 0 | 116 | 0 | 116 | 0 | 0 | nanobody | N.A. | vicugna pacos | N.A. | C | protein | styrene oxide isomerase | pseudomonas sp. vlb120 | 26 | 13 | 0.93 | H_only | train |
8pnu_J | 8pnu | cryo-em structure of styrene oxide isomerase bound to benzylamine inhibitor | no | membrane protein | 2023-07-02 | 2024-04-03 | electron microscopy | 2.12 | N.A. | N.A. | 38744914 | 10.1038/s41557-024-01523-y | 0 | auth_asym_id | VHH | IGHV3 | N.A. | J | N.A. | AQGQLVESGGGLVQAGGSLRLSCTGSGRAFVTPAVGWFRQAPGKEREFVGTINWSGSHTSYADPVKGRFTISRDNAKETVYLQMNNLKPEDADVYYCASRGVSGRYEYWGKGTPVTVSSHHHHHHEPEA | N.A. | QLVESGGGLVQAGGSLRLSCTGSGRAFVTPAVGWFRQAPGKEREFVGTINWSGSHTSYADPVKGRFTISRDNAKETVYLQMNNLKPEDADVYYCASRGVSGRYEYWGKGTPVTVSS | N.A. | 13.677 | 0 | 129 | 0 | 116 | 0 | 116 | 0 | 0 | nanobody | N.A. | vicugna pacos | N.A. | G | protein | styrene oxide isomerase | pseudomonas sp. vlb120 | 26 | 13 | 0.93 | H_only | train |
8pnu_K | 8pnu | cryo-em structure of styrene oxide isomerase bound to benzylamine inhibitor | no | membrane protein | 2023-07-02 | 2024-04-03 | electron microscopy | 2.12 | N.A. | N.A. | 38744914 | 10.1038/s41557-024-01523-y | 0 | auth_asym_id | VHH | IGHV3 | N.A. | K | N.A. | AQGQLVESGGGLVQAGGSLRLSCTGSGRAFVTPAVGWFRQAPGKEREFVGTINWSGSHTSYADPVKGRFTISRDNAKETVYLQMNNLKPEDADVYYCASRGVSGRYEYWGKGTPVTVSSHHHHHHEPEA | N.A. | QLVESGGGLVQAGGSLRLSCTGSGRAFVTPAVGWFRQAPGKEREFVGTINWSGSHTSYADPVKGRFTISRDNAKETVYLQMNNLKPEDADVYYCASRGVSGRYEYWGKGTPVTVSS | N.A. | 13.676998 | 0 | 129 | 0 | 116 | 0 | 116 | 0 | 0 | nanobody | N.A. | vicugna pacos | N.A. | G;H | protein;protein | styrene oxide isomerase;styrene oxide isomerase | pseudomonas sp. vlb120;pseudomonas sp. vlb120 | 13;26 | 5;13 | 1.0;0.93 | H_only | train |
8pnu_L | 8pnu | cryo-em structure of styrene oxide isomerase bound to benzylamine inhibitor | no | membrane protein | 2023-07-02 | 2024-04-03 | electron microscopy | 2.12 | N.A. | N.A. | 38744914 | 10.1038/s41557-024-01523-y | 0 | auth_asym_id | VHH | IGHV3 | N.A. | L | N.A. | AQGQLVESGGGLVQAGGSLRLSCTGSGRAFVTPAVGWFRQAPGKEREFVGTINWSGSHTSYADPVKGRFTISRDNAKETVYLQMNNLKPEDADVYYCASRGVSGRYEYWGKGTPVTVSSHHHHHHEPEA | N.A. | QLVESGGGLVQAGGSLRLSCTGSGRAFVTPAVGWFRQAPGKEREFVGTINWSGSHTSYADPVKGRFTISRDNAKETVYLQMNNLKPEDADVYYCASRGVSGRYEYWGKGTPVTVSS | N.A. | 13.676979 | 0 | 129 | 0 | 116 | 0 | 116 | 0 | 0 | nanobody | N.A. | vicugna pacos | N.A. | I | protein | styrene oxide isomerase | pseudomonas sp. vlb120 | 26 | 13 | 0.93 | H_only | train |
8jyq_A_B | 8jyq | crystal structure of cancer-specific anti-her2 antibody h2mab-214 in complex with epitope peptide | no | immune system | 2023-07-03 | 2024-03-13 | x-ray diffraction | 1.75 | 0.233 | 0.196 | 38460519 | 10.1016/j.str.2024.02.007 | 0 | auth_asym_id | VH+:VL+ | IGHV2 | IGKV7 | A | B | GRQVTLKESGPGILQPSQTLSLTCSFSGFSLSTSGMGVSWIRQPSGKGLEWLAHIFWDDDKRYNPSLKSRLTISKDTSRNKVFLKITSVDTADTATYYCARRVVATDWYFDVWGAGTTVTVCSGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIEAK | GRDIVLTQSPASLAVSLGQRATISCRASESVEYYGTTLMQWYQQKPGQPPKLLIYAASKVESGVPARFSGSGSGTDFSLNIHPVEEDDVAMYFCQQSRKVPLTFGAGTKLELKRGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQCKRQPILDAIEAKGTLLG | QVTLKESGPGILQPSQTLSLTCSFSGFSLSTSGMGVSWIRQPSGKGLEWLAHIFWDDDKRYNPSLKSRLTISKDTSRNKVFLKITSVDTADTATYYCARRVVATDWYFDVWGAGTTVTVCSGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAI | RDIVLTQSPASLAVSLGQRATISCRASESVEYYGTTLMQWYQQKPGQPPKLLIYAASKVESGVPARFSGSGSGTDFSLNIHPVEEDDVAMYFCQQSRKVPLTFGAGTKLELKRGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQCKRQPILDAIEAK | 20.927729 | 19.928593 | 174 | 170 | 169 | 154 | 169 | 164 | 108 | h2casmab-1 vh(s112c),sarah | h2casmab-1 vl,sarah(s37c) | mus musculus | mus musculus | C | peptide | h2casmab-1 epitope peptide | homo sapiens | 23 | 15 | 1 | HL | train |
8jyq_D_E | 8jyq | crystal structure of cancer-specific anti-her2 antibody h2mab-214 in complex with epitope peptide | no | immune system | 2023-07-03 | 2024-03-13 | x-ray diffraction | 1.75 | 0.233 | 0.196 | 38460519 | 10.1016/j.str.2024.02.007 | 0 | auth_asym_id | VH+:VL+ | IGHV2 | IGKV7 | D | E | GRQVTLKESGPGILQPSQTLSLTCSFSGFSLSTSGMGVSWIRQPSGKGLEWLAHIFWDDDKRYNPSLKSRLTISKDTSRNKVFLKITSVDTADTATYYCARRVVATDWYFDVWGAGTTVTVCSGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIEAK | GRDIVLTQSPASLAVSLGQRATISCRASESVEYYGTTLMQWYQQKPGQPPKLLIYAASKVESGVPARFSGSGSGTDFSLNIHPVEEDDVAMYFCQQSRKVPLTFGAGTKLELKRGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQCKRQPILDAIEAKGTLLG | QVTLKESGPGILQPSQTLSLTCSFSGFSLSTSGMGVSWIRQPSGKGLEWLAHIFWDDDKRYNPSLKSRLTISKDTSRNKVFLKITSVDTADTATYYCARRVVATDWYFDVWGAGTTVTVCSGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIEA | RDIVLTQSPASLAVSLGQRATISCRASESVEYYGTTLMQWYQQKPGQPPKLLIYAASKVESGVPARFSGSGSGTDFSLNIHPVEEDDVAMYFCQQSRKVPLTFGAGTKLELKRGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQCKRQPILDAIEAKGTL | 20.88627 | 21.00925 | 174 | 170 | 171 | 164 | 171 | 167 | 124 | h2casmab-1 vh(s112c),sarah | h2casmab-1 vl,sarah(s37c) | mus musculus | mus musculus | F | peptide | h2casmab-1 epitope peptide | homo sapiens | 24 | 17 | 1 | HL | train |
8jyr_H_L | 8jyr | crystal structure of anti-her2 antibody h2mab-119 in complex with her2 domain i | no | immune system | 2023-07-03 | 2024-03-13 | x-ray diffraction | 1.69 | 0.209 | 0.173 | 38460519 | 10.1016/j.str.2024.02.007 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV7 | H | L | EIQLQQSGPELVKPGASVKVSCKASGYAFTSYNMYWVKQSHGKSLEWIGYIDPKHGGTSYNQKFKGKATMTVDKSSNTANMHLNSLTSEDSAVYYCARMNYGSGYAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | NIVLTQSPASLAVSLGQRATISCRASESVDSYGNSFMHWYQQKPGQPPKLLIFLASNLESGVPPRFSGSGSRTDFTLTIDPVEADDAATYYCQQNNEDLRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EIQLQQSGPELVKPGASVKVSCKASGYAFTSYNMYWVKQSHGKSLEWIGYIDPKHGGTSYNQKFKGKATMTVDKSSNTANMHLNSLTSEDSAVYYCARMNYGSGYAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRD | NIVLTQSPASLAVSLGQRATISCRASESVDSYGNSFMHWYQQKPGQPPKLLIFLASNLESGVPPRFSGSGSRTDFTLTIDPVEADDAATYYCQQNNEDLRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | 21.66278 | 23.55715 | 222 | 218 | 217 | 215 | 221 | 215 | 95 | h2mab-119 vh-ch1 | h2mab-119 light chain | mus musculus | mus musculus | A | protein | receptor tyrosine-protein kinase erbb-2 | homo sapiens | 42 | 19 | 0.9 | HL | train |
8jys_A | 8jys | sars-cov-2 spike rbd (dimer) in complex with two 2s-1244 nanobodies | yes | viral protein | 2023-07-03 | 2024-06-12 | electron microscopy | 4.5 | N.A. | N.A. | 38939869 | 10.1002/EXP.20230086 | 0 | auth_asym_id | VHH- | N.A. | N.A. | A | N.A. | QVQLVESGGGPVQAGGSLRLSCTCSRCTFNWDGMGWFRQAPGKEREFVATISWSGQEPAYADSVKGRFTISRDKPKNTVYLQMTSLKSEDTAVYYCAAAQYTGASYSILRDQVGYDYWGQGTRVTVSAEPKTPKPQDGQAGQ | N.A. | ATISWSGQEPAYADSVKGRFTISRDKPKNTVYLQMTSLKSEDTAVYYCAAAQYTGASYSILRDQVGYD | N.A. | 9.764239 | 0 | 142 | 0 | 31 | 0 | 68 | 0 | 0 | ibt-cov144 nanobody | N.A. | camelus bactrianus | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
8jys_C | 8jys | sars-cov-2 spike rbd (dimer) in complex with two 2s-1244 nanobodies | yes | viral protein | 2023-07-03 | 2024-06-12 | electron microscopy | 4.5 | N.A. | N.A. | 38939869 | 10.1002/EXP.20230086 | 0 | auth_asym_id | VHH- | N.A. | N.A. | C | N.A. | QVQLVESGGGPVQAGGSLRLSCTCSRCTFNWDGMGWFRQAPGKEREFVATISWSGQEPAYADSVKGRFTISRDKPKNTVYLQMTSLKSEDTAVYYCAAAQYTGASYSILRDQVGYDYWGQGTRVTVSAEPKTPKPQDGQAGQ | N.A. | ATISWSGQEPAYADSVKGRFTISRDKPKNTVYLQMTSLKSEDTAVYYCAAAQYTGASYSILRDQVGYDY | N.A. | 9.792619 | 0 | 142 | 0 | 32 | 0 | 69 | 0 | 0 | ibt-cov144 nanobody | N.A. | camelus bactrianus | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
8jz7_S | 8jz7 | cryo-em structure of mk-6892-bound hcar2 in complex with gi protein | yes | membrane protein | 2023-07-04 | 2023-10-04 | electron microscopy | 2.6 | N.A. | N.A. | 37743365 | 10.1038/s41392-023-01625-y | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAENLYFQGHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.585236 | 0 | 266 | 0 | 232 | 0 | 246 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | B;D | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1 | homo sapiens;homo sapiens | 19;37 | 8;23 | 0.89;0.92 | H_only | train |
8jza_A | 8jza | crystal structure of single domain antibody kt75 of human thyroglobulin | no | immune system | 2023-07-04 | 2024-07-10 | x-ray diffraction | 1.35 | 0.174 | 0.13 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | A | N.A. | ADVQLQASGGGSVQTGGSLRLSCAASGYSGSRYSMAWFRQVPGKEREGLAFINDDGSRTHYEGSAKDRFGISRDNAQNTMYLQMNGLKPEDTAMYYCAARESTWWITVPLGEAEYPYWGQGTQVTVSSHHHHHH | N.A. | DVQLQASGGGSVQTGGSLRLSCAASGYSGSRYSMAWFRQVPGKEREGLAFINDDGSRTHYEGSAKDRFGISRDNAQNTMYLQMNGLKPEDTAMYYCAARESTWWITVPLGEAEYPYWGQGTQVTVSS | N.A. | 13.912879 | 0 | 134 | 0 | 127 | 0 | 127 | 0 | 0 | single domain antibody kt75 of human thyroglobulin | N.A. | camelus dromedarius | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
8tea_H_G | 8tea | hcmv pentamer in complex with cs2pt1p2_a10l fab and cs3pt1p4_c1l fab | no | viral protein | 2023-07-05 | 2023-08-09 | electron microscopy | 3.4 | N.A. | N.A. | 37967532 | 10.1016/j.immuni.2023.10.009 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV1 | H | G | MEFGLSWVFLVALIKGVQCQVHLEESGGGLVKPGGSLRLSCVASGFSFSDYYMSWIRQAPGKGLEWLSYISPSGSPTSNADSMKGRFTISRDNARSSLYLQVHSLRVEDTAVYYCARDNTVFGVVTTPMDHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | QSALTQPPSASGTPGQRVTISCSGSSSNIGSNTVHWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSRSGTSASLAISGLRSEDEADYYCAAWDDSLNGRVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VHLEESGGGLVKPGGSLRLSCVASGFSFSDYYMSWIRQAPGKGLEWLSYISPSGSPTSNADSMKGRFTISRDNARSSLYLQVHSLRVEDTAVYYCARDNTVFGVVTTPMDHWGQGTLVTV | SALTQPPSASGTPGQRVTISCSGSSSNIGSNTVHWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSRSGTSASLAISGLRSEDEADYYCAAWDDSLNGRVFGTGTKVTVL | 13.901037 | 13.342035 | 243 | 216 | 120 | 109 | 120 | 109 | 44 | cs2pt1p2_a10l fab heavy chain | cs2pt1p2_a10l fab light chain | homo sapiens | homo sapiens | C | protein | envelope protein ul128 | human betaherpesvirus 5 | 45 | 24 | 0.96 | HL | train |
8tea_F_I | 8tea | hcmv pentamer in complex with cs2pt1p2_a10l fab and cs3pt1p4_c1l fab | no | viral protein | 2023-07-05 | 2023-08-09 | electron microscopy | 3.4 | N.A. | N.A. | 37967532 | 10.1016/j.immuni.2023.10.009 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | F | I | QVQLVQSGAEVKKPGSSVKVSCKASGGTFTDYALSWVRQAPGQGLEWMGGIIPVLGTPHYAQKFEDRVTIIADESTGTVFMALSSLRSDDTGMYYCARGVTHPYYYYAMDVWGQGTTITVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | QSALTQPASVSGSPGQSISISCTGTSSDVGAYDYVSWYQQHPGKAPRLIIYDVNKRPSGVPYRFSGSKSGTAASLTISGLQSEDEAVYYCGSYTSSSAFFYVFGTGTMVTVLRQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAEVKKPGSSVKVSCKASGGTFTDYALSWVRQAPGQGLEWMGGIIPVLGTPHYAQKFEDRVTIIADESTGTVFMALSSLRSDDTGMYYCARGVTHPYYYYAMDVWGQGTTITVS | QSALTQPASVSGSPGQSISISCTGTSSDVGAYDYVSWYQQHPGKAPRLIIYDVNKRPSGVPYRFSGSKSGTAASLTISGLQSEDEAVYYCGSYTSSSAFFYVFGTGTMVTV | 13.901571 | 13.48098 | 223 | 218 | 121 | 111 | 121 | 111 | 43 | cs3pt1p4_c1l fab heavy chain | cs3pt1p4_c1l fab light chain | homo sapiens | homo sapiens | C;D | protein;protein | envelope protein ul128;envelope glycoprotein ul130 | human betaherpesvirus 5;human betaherpesvirus 5 | 26;26 | 12;14 | 0.86;0.93 | HL | train |
8tdx_A_D | 8tdx | trnm-b.01 in complex with hiv env fusion peptide | no | immune system | 2023-07-05 | 2024-07-10 | x-ray diffraction | 2.09 | 0.24 | 0.204 | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | A | D | QVQLQESGPGVVKPSETLSLTCEVSLHASRVGSYYWSWIRQSQGQRPEWMGGLYSDTGNTDYNPSLKSRVSLSRDMSKKQFFLNLRSVTATDTAVYFCVSRYVDHWTNRRFDVWGPGAQVTVTSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTC | DIQMTQSPSSLSASVGDRVTVTCRASLDINKDLNWYQQKPGKAPALLIYAASTLQTGVSSRFSGSGSGTQFTLTISSLQPEDFATYYCLQDYSFPLTFGGGTKIDLKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRAA | VQLQESGPGVVKPSETLSLTCEVSLHASRVGSYYWSWIRQSQGQRPEWMGGLYSDTGNTDYNPSLKSRVSLSRDMSKKQFFLNLRSVTATDTAVYFCVSRYVDHWTNRRFDVWGPGAQVTVTSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTC | DIQMTQSPSSLSASVGDRVTVTCRASLDINKDLNWYQQKPGKAPALLIYAASTLQTGVSSRFSGSGSGTQFTLTISSLQPEDFATYYCLQDYSFPLTFGGGTKIDLKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNR | 23.906471 | 21.338593 | 227 | 213 | 223 | 211 | 226 | 211 | 101 | trnm-b.01 fab heavy chain | trnm-b.01 fab light chain | macaca mulatta | macaca mulatta | E | peptide | env fusion peptide | human immunodeficiency virus 1 | 28 | 18 | 0.9 | HL | train |
8tdx_B_C | 8tdx | trnm-b.01 in complex with hiv env fusion peptide | no | immune system | 2023-07-05 | 2024-07-10 | x-ray diffraction | 2.09 | 0.24 | 0.204 | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | B | C | QVQLQESGPGVVKPSETLSLTCEVSLHASRVGSYYWSWIRQSQGQRPEWMGGLYSDTGNTDYNPSLKSRVSLSRDMSKKQFFLNLRSVTATDTAVYFCVSRYVDHWTNRRFDVWGPGAQVTVTSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTC | DIQMTQSPSSLSASVGDRVTVTCRASLDINKDLNWYQQKPGKAPALLIYAASTLQTGVSSRFSGSGSGTQFTLTISSLQPEDFATYYCLQDYSFPLTFGGGTKIDLKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRAA | VQLQESGPGVVKPSETLSLTCEVSLHASRVGSYYWSWIRQSQGQRPEWMGGLYSDTGNTDYNPSLKSRVSLSRDMSKKQFFLNLRSVTATDTAVYFCVSRYVDHWTNRRFDVWGPGAQVTVTSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTC | DIQMTQSPSSLSASVGDRVTVTCRASLDINKDLNWYQQKPGKAPALLIYAASTLQTGVSSRFSGSGSGTQFTLTISSLQPEDFATYYCLQDYSFPLTFGGGTKIDLKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRAA | 24.069244 | 21.300508 | 227 | 213 | 223 | 213 | 226 | 213 | 97 | trnm-b.01 fab heavy chain | trnm-b.01 fab light chain | macaca mulatta | macaca mulatta | F | peptide | env fusion peptide | human immunodeficiency virus 1 | 28 | 18 | 0.9 | HL | train |
8te7_B_C | 8te7 | structure of trnm-f.01 | no | immune system | 2023-07-05 | 2024-07-10 | x-ray diffraction | 3.18 | 0.263 | 0.233 | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | B | C | QVQLQESGPGVVKPSETLSLTCAVSGDSIKSAYQYWNWIRQPRGKGPEWIGGVYSSSDSTAYNPSLESRVSISRDTSNNRFSLNLRSVTATDTATYFCARSVRDSRGWGRYFLDTWGQGLLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQ | DIQMTQSPSSLSASVGDTVTITCRASQSISTWLAWYQQKPGKAPKVLIYSASILQSGVPSRFRGSGSGSDFTLTIGSLQIEDFATYFCQQYTGSPFTFGGGTKVEIKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGVVKPSETLSLTCAVSGDSIKSAYQYWNWIRQPRGKGPEWIGGVYSSSDSTAYNPSLESRVSISRDTSNNRFSLNLRSVTATDTATYFCARSVRDSRGWGRYFLDTWGQGLLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEV | DIQMTQSPSSLSASVGDTVTITCRASQSISTWLAWYQQKPGKAPKVLIYSASILQSGVPSRFRGSGSGSDFTLTIGSLQIEDFATYFCQQYTGSPFTFGGGTKVEIKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | 24.01395 | 22.82909 | 237 | 214 | 234 | 214 | 234 | 214 | 110 | trnm-f.01 fab heavy chain | trnm-f.01 fab light chain | macaca mulatta | macaca mulatta | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8jzz_H | 8jzz | structure of human c5a-desarg bound human c5ar1 in complex with go | yes | signaling protein/immune system | 2023-07-06 | 2023-10-18 | electron microscopy | 3.31 | N.A. | N.A. | 37852260 | 10.1016/j.cell.2023.09.020 | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | 17.247908 | 0 | 248 | 0 | 231 | 0 | 248 | 0 | 0 | antibody fragment scfv16 | N.A. | mus musculus | N.A. | B;C | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(o) subunit alpha | homo sapiens;homo sapiens | 26;24 | 10;13 | 0.77;0.87 | H_only | train |
8jzp_H | 8jzp | structure of mouse c5a-human c5ar1-go complex | yes | signaling protein/immune system | 2023-07-06 | 2025-01-15 | electron microscopy | 3.45 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.365303 | 0 | 248 | 0 | 232 | 0 | 247 | 0 | 0 | antibody fragment scfv16 | N.A. | mus musculus | N.A. | B;C | protein;protein | guanine nucleotide-binding protein g(o) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 28;27 | 17;12 | 0.89;0.86 | H_only | train |
8ppm_H_L | 8ppm | il-12rb1 neutralizing fab4, crystal kappa variant | no | immunosuppressant | 2023-07-07 | 2024-02-07 | x-ray diffraction | 2.03 | 0.22 | 0.193 | 38287195 | 10.1038/s41594-023-01190-6 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | QVQLVESGGGVVQPGRSLRLSCAASGFTFTSYGMSWVRQAPGKGLEWVAGISYDASDTEYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARSPDYIIDYGFDYWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCGHHHHHH | AIQMTQSPSSLSASVGDRVTITCRASQGISSDLAWYQQKPGKAPKLLIYDASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYWWYPFTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC | QVQLVESGGGVVQPGRSLRLSCAASGFTFTSYGMSWVRQAPGKGLEWVAGISYDASDTEYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARSPDYIIDYGFDYWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | AIQMTQSPSSLSASVGDRVTITCRASQGISSDLAWYQQKPGKAPKLLIYDASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYWWYPFTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGE | 21.975985 | 22.986687 | 231 | 212 | 220 | 211 | 222 | 211 | 93 | fab4 heavy chain | fab4 light chain, crystal kappa variant | homo sapiens x mus musculus hybrid cell line | homo sapiens x mus musculus hybrid cell line | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8k0c_E_F | 8k0c | cryo-em structure of conformation 1 of complex of nipah virus attachment glycoprotein g with 1e5 neutralizing antibody | no | viral protein | 2023-07-08 | 2024-05-01 | electron microscopy | 3.18 | N.A. | N.A. | 38773072 | 10.1038/s41467-024-48601-w | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | E | F | QVQLQESGPGVVKPSETLSLTCAVSGGSISDTYRWSWIRQPPGKGLEWIGYIYGSATSTYYNPSLSSRVTISKDMSKNQFSLNLNSVTAADTAVYYCARDYQYYYSGSYPTPHNWFDVWGPGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSGLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHHHHHHH | DIQMTQSPSSLSASVGDRVTITCRASQGIIDYLSWYQQKPGKAPKLLISTASNLESGVPSRFSGSGSGTEFTLTISSLQPEDFATYSCLQGYTTPYTFGQGTKVEIKTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGVVKPSETLSLTCAVSGGSISDTYRWSWIRQPPGKGLEWIGYIYGSATSTYYNPSLSSRVTISKDMSKNQFSLNLNSVTAADTAVYYCARDYQYYYSGSYPTPHNWFDVWGPGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSGLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHHHHHHH | DIQMTQSPSSLSASVGDRVTITCRASQGIIDYLSWYQQKPGKAPKLLISTASNLESGVPSRFSGSGSGTEFTLTISSLQPEDFATYSCLQGYTTPYTFGQGTKVEIKTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 25.69499 | 22.746538 | 242 | 213 | 242 | 213 | 242 | 213 | 118 | heavy chain of 1e5 fab fragments | light chain of 1e5 fab fragments | macaca mulatta | macaca mulatta | A | protein | glycoprotein g | nipah virus | 93 | 35 | 0.76 | HL | train |
8k0c_G_H | 8k0c | cryo-em structure of conformation 1 of complex of nipah virus attachment glycoprotein g with 1e5 neutralizing antibody | no | viral protein | 2023-07-08 | 2024-05-01 | electron microscopy | 3.18 | N.A. | N.A. | 38773072 | 10.1038/s41467-024-48601-w | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | G | H | QVQLQESGPGVVKPSETLSLTCAVSGGSISDTYRWSWIRQPPGKGLEWIGYIYGSATSTYYNPSLSSRVTISKDMSKNQFSLNLNSVTAADTAVYYCARDYQYYYSGSYPTPHNWFDVWGPGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSGLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHHHHHHH | DIQMTQSPSSLSASVGDRVTITCRASQGIIDYLSWYQQKPGKAPKLLISTASNLESGVPSRFSGSGSGTEFTLTISSLQPEDFATYSCLQGYTTPYTFGQGTKVEIKTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGVVKPSETLSLTCAVSGGSISDTYRWSWIRQPPGKGLEWIGYIYGSATSTYYNPSLSSRVTISKDMSKNQFSLNLNSVTAADTAVYYCARDYQYYYSGSYPTPHNWFDVWGPGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSGLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHHHHHHH | DIQMTQSPSSLSASVGDRVTITCRASQGIIDYLSWYQQKPGKAPKLLISTASNLESGVPSRFSGSGSGTEFTLTISSLQPEDFATYSCLQGYTTPYTFGQGTKVEIKTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 25.69499 | 22.746536 | 242 | 213 | 242 | 213 | 242 | 213 | 118 | heavy chain of 1e5 fab fragments | light chain of 1e5 fab fragments | macaca mulatta | macaca mulatta | B | protein | glycoprotein g | nipah virus | 93 | 35 | 0.76 | HL | train |
8pq2_H_L | 8pq2 | xbb 1.0 rbd bound to p4j15 (local) | no | viral protein | 2023-07-10 | 2023-11-01 | electron microscopy | 3.85 | N.A. | N.A. | 37852477 | 10.1016/j.jinf.2023.10.008 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | H | L | QVQIQQWGAGLLKPSETLSLTCAVYDESFSDYFWTWIRQSPGMGLEWIGEVTHTGSANYNPSLMSRVTMSRDTSKNQISLKLTSVTAADTAVYYCARDSPLGSIIKRGDYWGQGTLVTVSS | DIQMTQSPSSLSASVGDRVTVTCQASQGITNYVNWYQQKPGKAPKLLIYHASHLETGVPSRFSGSGSGTDFTFTISSLQPEDFATYYCQQFDHLPPTFGQGTRLEIK | IQQWGAGLLKPSETLSLTCAVYDESFSDYFWTWIRQSPGMGLEWIGEVTHTGSANYNPSLMSRVTMSRDTSKNQISLKLTSVTAADTAVYYCARDSPLGSIIKRGDYWGQGTLVT | VGDRVTVTCQASQGITNYVNWYQQKPGKAPKLLIYHASHLETGVPSRFSGSGSGTDFTFTISSLQPEDFATYYCQQFDHLPPTFG | 13.929079 | 12.989008 | 121 | 107 | 115 | 85 | 115 | 85 | 36 | p4j15 fragment antigen-binding heavy chain | p4j15 fragment antigen-binding light chain | homo sapiens | homo sapiens | C | protein | spike protein s2' | severe acute respiratory syndrome coronavirus 2 | 41 | 19 | 0.9 | HL | train |
8tfe_A_B | 8tfe | crystal structure of fab fragment of anti-hcv e2 antibody (cbh-7) | no | immune system | 2023-07-10 | 2024-07-17 | x-ray diffraction | 1.62 | 0.214 | 0.177 | 40442315 | 10.1038/s42003-025-08239-w | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | A | B | MDWTWRFLFVVAAATVQSQVQLVQSGAEVRKPGSSVKISCKASGGTFNNYALSWVRQAPGQGLDWMGEITPIFGTEKYAQKFQGRVTITADESTNTLYMDLSSLRSEDSAVYYCARRGYIYGSPFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTAGWSHPQFEK | MDMRVPAQLLGLLLLWLRARCDVLMTQSPSSLSASVGDRVTISCRASQSISSFLNWYQQKPGKAPKLLISAASSLSSGVPSRFSGSGSGTSFTLTISSLQPEDVATYYCQQSYSFLLTFGGGTNVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVRKPGSSVKISCKASGGTFNNYALSWVRQAPGQGLDWMGEITPIFGTEKYAQKFQGRVTITADESTNTLYMDLSSLRSEDSAVYYCARRGYIYGSPFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | DVLMTQSPSSLSASVGDRVTISCRASQSISSFLNWYQQKPGKAPKLLISAASSLSSGVPSRFSGSGSGTSFTLTISSLQPEDVATYYCQQSYSFLLTFGGGTNVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 20.930973 | 23.476984 | 254 | 235 | 220 | 214 | 220 | 214 | 95 | cbh-7 heavy chain | cbh-7 light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8tfe_C_D | 8tfe | crystal structure of fab fragment of anti-hcv e2 antibody (cbh-7) | no | immune system | 2023-07-10 | 2024-07-17 | x-ray diffraction | 1.62 | 0.214 | 0.177 | 40442315 | 10.1038/s42003-025-08239-w | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | C | D | MDWTWRFLFVVAAATVQSQVQLVQSGAEVRKPGSSVKISCKASGGTFNNYALSWVRQAPGQGLDWMGEITPIFGTEKYAQKFQGRVTITADESTNTLYMDLSSLRSEDSAVYYCARRGYIYGSPFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTAGWSHPQFEK | MDMRVPAQLLGLLLLWLRARCDVLMTQSPSSLSASVGDRVTISCRASQSISSFLNWYQQKPGKAPKLLISAASSLSSGVPSRFSGSGSGTSFTLTISSLQPEDVATYYCQQSYSFLLTFGGGTNVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVRKPGSSVKISCKASGGTFNNYALSWVRQAPGQGLDWMGEITPIFGTEKYAQKFQGRVTITADESTNTLYMDLSSLRSEDSAVYYCARRGYIYGSPFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | DVLMTQSPSSLSASVGDRVTISCRASQSISSFLNWYQQKPGKAPKLLISAASSLSSGVPSRFSGSGSGTSFTLTISSLQPEDVATYYCQQSYSFLLTFGGGTNVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 21.319754 | 23.222164 | 254 | 235 | 221 | 211 | 221 | 211 | 96 | cbh-7 heavy chain | cbh-7 light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8k18_C_D | 8k18 | neutralization antibody zcp4c9 bound with sars-cov-2 omicron ba.5 rbd | yes | viral protein | 2023-07-10 | 2024-10-09 | electron microscopy | 3.68 | N.A. | N.A. | 39341153 | 10.1016/j.ebiom.2024.105354 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | C | D | EVQLVESGGNLVQPGGSLRLSCEVSGFIVSRNYMSWVRQAPGQGLEWLSIIYPGGSTFYAESVKDRFTISRPDSKNTLYLQMNSLRAEDTGTYFCARGLLEWRYGQDVWGQGTTVTVSS | DIQMTQSPSSLSASVGDRVTITCQASQDVNEDLNWYQQKPGKAPKLLIYGAFNLETGVSSKFSGSGSGTHFTLTISSLQPEDIATYYCQQYGHQALSFGGGTKVEIK | EVQLVESGGNLVQPGGSLRLSCEVSGFIVSRNYMSWVRQAPGQGLEWLSIIYPGGSTFYAESVKDRFTISRPDSKNTLYLQMNSLRAEDTGTYFCARGLLEWRYGQDVWGQGTTVTVSS | DIQMTQSPSSLSASVGDRVTITCQASQDVNEDLNWYQQKPGKAPKLLIYGAFNLETGVSSKFSGSGSGTHFTLTISSLQPEDIATYYCQQYGHQALSFGGGTKVEIK | 14.059382 | 13.180466 | 119 | 107 | 119 | 107 | 119 | 107 | 44 | zcp4c9 heavy chain | zcp4c9 light chain | homo sapiens | homo sapiens | E | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 67 | 22 | 0.69 | HL | train |
8k19_A_B | 8k19 | neutralization antibody zcp3b4 bound with sars-cov-2 omicron ba.5 rbd | yes | viral protein | 2023-07-10 | 2024-10-09 | electron microscopy | 3.88 | N.A. | N.A. | 39341153 | 10.1016/j.ebiom.2024.105354 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | A | B | EVQLVESGGGLVQPGGSLRLSCAASEIIVSSNYMRWVRQAPGKGLEWVSDIYPGGTTYYADSVKGRFSISRDNSKNTMYLQMSDLRAEDTAVYYCARPIMGGRHGMDVWGQGTTVTVSS | DIQMTQSPASLSASVGDRVTISCQASQDINKYLNWYQHKPGRAPKLLIFDASTLETGVPSRFSGSGSGTHFTLTISSLQPEDIATYYCLQHDHVPLTFGGGTKVEIK | EVQLVESGGGLVQPGGSLRLSCAASEIIVSSNYMRWVRQAPGKGLEWVSDIYPGGTTYYADSVKGRFSISRDNSKNTMYLQMSDLRAEDTAVYYCARPIMGGRHGMDVWGQGTTVTVSS | DIQMTQSPASLSASVGDRVTISCQASQDINKYLNWYQHKPGRAPKLLIFDASTLETGVPSRFSGSGSGTHFTLTISSLQPEDIATYYCLQHDHVPLTFGGGTKVEIK | 13.633245 | 13.218967 | 119 | 107 | 119 | 107 | 119 | 107 | 39 | zcp3b4 heavy chain | zcp3b4 light chain | homo sapiens | homo sapiens | E | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 58 | 22 | 0.76 | HL | train |
8tfp_B_A | 8tfp | fab from c10-s66k antibody in complex with carfentanil | no | immune system | 2023-07-11 | 2023-08-16 | x-ray diffraction | 1.78 | 0.207 | 0.178 | 37534714 | 10.1021/acschemneuro.3c00455 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV3 | B | A | QVQLQESGPGLVKPSGTLSLTCTVSGGFISSRNWWSWVRQPPGKGLEWIGEVYHTGITNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCAREVVGPTTGYFDLWGRGTLVTIVSRRLPPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SYELTQPPSVSVSPGQTARITCSGDTLPKRSGYWYQQKPDQAPLLVINKDTERPSGIPERFSGSKSGTTVTLTISGVQAEDEADYYCQSADSSFTYPSFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLQESGPGLVKPSGTLSLTCTVSGGFISSRNWWSWVRQPPGKGLEWIGEVYHTGITNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCAREVVGPTTGYFDLWGRGTLVTIVSRRLPPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | ELTQPPSVSVSPGQTARITCSGDTLPKRSGYWYQQKPDQAPLLVINKDTERPSGIPERFSGSKSGTTVTLTISGVQAEDEADYYCQSADSSFTYPSFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 21.36688 | 24.432085 | 223 | 214 | 215 | 209 | 220 | 209 | 93 | heavy chain of fab from c10-s66k antibody | light chain of fab from c10-s66k antibody | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8tfp_H_L | 8tfp | fab from c10-s66k antibody in complex with carfentanil | no | immune system | 2023-07-11 | 2023-08-16 | x-ray diffraction | 1.78 | 0.207 | 0.178 | 37534714 | 10.1021/acschemneuro.3c00455 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV3 | H | L | QVQLQESGPGLVKPSGTLSLTCTVSGGFISSRNWWSWVRQPPGKGLEWIGEVYHTGITNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCAREVVGPTTGYFDLWGRGTLVTIVSRRLPPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SYELTQPPSVSVSPGQTARITCSGDTLPKRSGYWYQQKPDQAPLLVINKDTERPSGIPERFSGSKSGTTVTLTISGVQAEDEADYYCQSADSSFTYPSFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLQESGPGLVKPSGTLSLTCTVSGGFISSRNWWSWVRQPPGKGLEWIGEVYHTGITNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCAREVVGPTTGYFDLWGRGTLVTIVSRRLPPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | ELTQPPSVSVSPGQTARITCSGDTLPKRSGYWYQQKPDQAPLLVINKDTERPSGIPERFSGSKSGTTVTLTISGVQAEDEADYYCQSADSSFTYPSFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 20.898785 | 23.935623 | 223 | 214 | 220 | 209 | 220 | 209 | 101 | heavy chain of fab from c10-s66k antibody | light chain of fab from c10-s66k antibody | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8tfq_B_A | 8tfq | fab from c10-s66k antibody in complex with fentanyl | no | immune system | 2023-07-11 | 2023-08-16 | x-ray diffraction | 1.8 | 0.215 | 0.178 | 37534714 | 10.1021/acschemneuro.3c00455 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV3 | B | A | QVQLQESGPGLVKPSGTLSLTCTVSGGFISSRNWWSWVRQPPGKGLEWIGEVYHTGITNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCAREVVGPTTGYFDLWGRGTLVTIVSRRLPPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SYELTQPPSVSVSPGQTARITCSGDTLPKRSGYWYQQKPDQAPLLVINKDTERPSGIPERFSGSKSGTTVTLTISGVQAEDEADYYCQSADSSFTYPSFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLQESGPGLVKPSGTLSLTCTVSGGFISSRNWWSWVRQPPGKGLEWIGEVYHTGITNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCAREVVGPTTGYFDLWGRGTLVTIVSRRLPPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | ELTQPPSVSVSPGQTARITCSGDTLPKRSGYWYQQKPDQAPLLVINKDTERPSGIPERFSGSKSGTTVTLTISGVQAEDEADYYCQSADSSFTYPSFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 21.379396 | 24.442282 | 223 | 214 | 215 | 209 | 220 | 209 | 92 | heavy chain from fab of c10_s66k antibody | light chain from fab of c10_s66k antibody | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8tfq_H_L | 8tfq | fab from c10-s66k antibody in complex with fentanyl | no | immune system | 2023-07-11 | 2023-08-16 | x-ray diffraction | 1.8 | 0.215 | 0.178 | 37534714 | 10.1021/acschemneuro.3c00455 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV3 | H | L | QVQLQESGPGLVKPSGTLSLTCTVSGGFISSRNWWSWVRQPPGKGLEWIGEVYHTGITNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCAREVVGPTTGYFDLWGRGTLVTIVSRRLPPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SYELTQPPSVSVSPGQTARITCSGDTLPKRSGYWYQQKPDQAPLLVINKDTERPSGIPERFSGSKSGTTVTLTISGVQAEDEADYYCQSADSSFTYPSFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLQESGPGLVKPSGTLSLTCTVSGGFISSRNWWSWVRQPPGKGLEWIGEVYHTGITNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCAREVVGPTTGYFDLWGRGTLVTIVSRRLPPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | ELTQPPSVSVSPGQTARITCSGDTLPKRSGYWYQQKPDQAPLLVINKDTERPSGIPERFSGSKSGTTVTLTISGVQAEDEADYYCQSADSSFTYPSFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 20.9397 | 23.958315 | 223 | 214 | 220 | 209 | 220 | 209 | 102 | heavy chain from fab of c10_s66k antibody | light chain from fab of c10_s66k antibody | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8tfr_A_B | 8tfr | apo fab from c10-s66k antibody | no | immune system | 2023-07-11 | 2023-08-16 | x-ray diffraction | 2.99 | 0.262 | 0.211 | 37534714 | 10.1021/acschemneuro.3c00455 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV3 | A | B | QVQLQESGPGLVKPSGTLSLTCTVSGGFISSRNWWSWVRQPPGKGLEWIGEVYHTGITNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCAREVVGPTTGYFDLWGRGTLVTISSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SYELTQPPSVSVSPGQTARITCSGDTLPKRSGYWYQQKPDQAPLLVINKDTERPSGIPERFSGSKSGTTVTLTISGVQAEDEADYYCQSADSSFTYPSFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLQESGPGLVKPSGTLSLTCTVSGGFISSRNWWSWVRQPPGKGLEWIGEVYHTGITNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCAREVVGPTTGYFDLWGRGTLVTISSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | ELTQPPSVSVSPGQTARITCSGDTLPKRSGYWYQQKPDQAPLLVINKDTERPSGIPERFSGSKSGTTVTLTISGVQAEDEADYYCQSADSSFTYPSFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 23.05719 | 21.46876 | 224 | 214 | 212 | 207 | 222 | 209 | 91 | heavy chain from fab of c10_s66k antibody | light chain from fab of c10_s66k antibody | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8tfn_H_L | 8tfn | structure of anti-tcrvbeta6-5 antibody in complex with the cognate tcr | no | immune system | 2023-07-11 | 2023-11-08 | x-ray diffraction | 2.54 | 0.294 | 0.245 | 38055824 | 10.1126/sciadv.adj6174 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | QVQLVQSGAEVKKPGSSVKVSCKASGHDFRLTYIHWVRQAPGQGLEWMGRVSAGSGNVKYNEKFKGRVTITADTSTSTAYMELSSLRSEDTAVYYCAVSYYSYDVLDYWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT | DIQMTQSPSFLSASVGDRVTITCKASQNVADRVVWHQQKPGKAPKALIYSSSHRYKGVPSRFSGSGSGTEFTLTISSLQPEDFATYFCQQFKSYPLTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGSSVKVSCKASGHDFRLTYIHWVRQAPGQGLEWMGRVSAGSGNVKYNEKFKGRVTITADTSTSTAYMELSSLRSEDTAVYYCAVSYYSYDVLDYWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK | DIQMTQSPSFLSASVGDRVTITCKASQNVADRVVWHQQKPGKAPKALIYSSSHRYKGVPSRFSGSGSGTEFTLTISSLQPEDFATYFCQQFKSYPLTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 21.004522 | 23.035093 | 225 | 214 | 197 | 199 | 216 | 212 | 90 | anti-tcrvb6-5 fab heavy chain | anti-tcrvb6-5 fab light chain | mus musculus | mus musculus | B | protein | trbv6-5 | homo sapiens | 44 | 17 | 0.77 | HL | train |
8tfl_H_L | 8tfl | ricin in complex with fab sylh3 | no | toxin | 2023-07-11 | 2024-04-17 | x-ray diffraction | 2.89 | 0.287 | 0.233 | 37903428 | 10.1021/acs.biochem.3c00480 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | QVQLQQSGAELMKPGASVKISCKSTGYTFSSYWIEWIKQRPGHGLEWIGEIFPGSGSINYNEKFKGKATFTADTSSNTAYMQLSSLTFEDSAVYYCARWDGNDFHNTMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDK | DIVMTQSPSSLSASLGGRVTITCKASQDIKKYIGWYQHRPGKGPRLLIHYTSTLQPGIPSRFSGGGSGRDYSFNISNLEPEDIATYYCLQYDHLWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | QVQLQQSGAELMKPGASVKISCKSTGYTFSSYWIEWIKQRPGHGLEWIGEIFPGSGSINYNEKFKGKATFTADTSSNTAYMQLSSLTFEDSAVYYCARWDGNDFHNTMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDK | DIVMTQSPSSLSASLGGRVTITCKASQDIKKYIGWYQHRPGKGPRLLIHYTSTLQPGIPSRFSGGGSGRDYSFNISNLEPEDIATYYCLQYDHLWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | 21.02782 | 23.48327 | 216 | 210 | 212 | 205 | 216 | 210 | 93 | sylh3 fab heavy chain | sylh3 fab light chain | mus musculus | mus musculus | B | protein | ricin b chain | ricinus communis | 46 | 20 | 0.87 | HL | train |
8tft_I_M | 8tft | fab of o13-1 human igg1 antibody bound to igv domain of human tim-3 | no | immune system | 2023-07-11 | 2024-08-28 | x-ray diffraction | 2.3 | 0.271 | 0.244 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | I | M | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGSYGTYYGNYFEYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | SYVLTQPPSVSVAPGKTARITCGGDNIGGKSVHWYQQKPGQAPVLVIYYDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVLDRRSDHWLFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGSYGTYYGNYFEYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | SYVLTQPPSVSVAPGKTARITCGGDNIGGKSVHWYQQKPGQAPVLVIYYDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVLDRRSDHWLFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 21.384394 | 24.024523 | 227 | 213 | 224 | 211 | 224 | 211 | 93 | o-13-1 igg1 fab heavy chain | o-13-1 igg1 fab light chain | homo sapiens | homo sapiens | F | protein | t-cell immunoglobulin mucin receptor 3 | homo sapiens | 40 | 19 | 0.86 | HL | train |
8tft_H_L | 8tft | fab of o13-1 human igg1 antibody bound to igv domain of human tim-3 | no | immune system | 2023-07-11 | 2024-08-28 | x-ray diffraction | 2.3 | 0.271 | 0.244 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | H | L | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGSYGTYYGNYFEYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | SYVLTQPPSVSVAPGKTARITCGGDNIGGKSVHWYQQKPGQAPVLVIYYDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVLDRRSDHWLFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGSYGTYYGNYFEYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | SYVLTQPPSVSVAPGKTARITCGGDNIGGKSVHWYQQKPGQAPVLVIYYDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVLDRRSDHWLFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | 21.744747 | 24.063398 | 227 | 213 | 224 | 213 | 224 | 213 | 100 | o-13-1 igg1 fab heavy chain | o-13-1 igg1 fab light chain | homo sapiens | homo sapiens | G | protein | t-cell immunoglobulin mucin receptor 3 | homo sapiens | 42 | 19 | 0.79 | HL | train |
8tgo_D | 8tgo | crystal structure of the bg505 triple tandem trimer gp140 hiv-1 env in complex with pgt124 and 35o22 | no | viral protein/immune system | 2023-07-12 | 2024-04-17 | x-ray diffraction | 5.75 | 0.292 | 0.242 | 38582771 | 10.1038/s41541-024-00862-8 | 0 | auth_asym_id | scFv | N.A. | N.A. | D | N.A. | QGQLVQSGATTTKPGSSVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVNMTTDTEVPVTSFTSTGAAYMEIRNLTSDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSSASTGGGGSGGGGSGGGGSGGGGSQSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQSGGLVPRGSHHHHHHHHSRS | N.A. | QGQLVQSGATTTKPGSSVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVNMTTDTEVPVTSFTSTGAAYMEIRNLTSDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSSASTGGGGSGGGGSGGGGSGGGGSQSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVL | N.A. | 18.009197 | 0 | 286 | 0 | 236 | 0 | 264 | 0 | 0 | 35o22 scfv | N.A. | homo sapiens | N.A. | B | protein | envelope glycoprotein gp41 | human immunodeficiency virus 1 | 28 | 10 | 0.71 | H_only | train |
8tgo_O_C | 8tgo | crystal structure of the bg505 triple tandem trimer gp140 hiv-1 env in complex with pgt124 and 35o22 | no | viral protein/immune system | 2023-07-12 | 2024-04-17 | x-ray diffraction | 5.75 | 0.292 | 0.242 | 38582771 | 10.1038/s41541-024-00862-8 | 0 | auth_asym_id | VH:FabL | IGHV4 | IGLV3 | O | C | QVQLQESGPGLVRPSETLSVTCIVSGGSISNYYWTWIRQSPGKGLEWIGYISDRETTTYNPSLNSRAVISRDTSKNQLSLQLRSVTTADTAIYFCATARRGQRIYGVVSFGEFFYYYYMDVWGKGTAVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SYVSPLSVALGETARISCGRQALGSRAVQWYQHKPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTTATLTISGVEVGDEADYYCHMWDSRSGFSWSFGGATRLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS | QVQLQESGPGLVRPSETLSVTCIVSGGSISNYYWTWIRQSPGKGLEWIGYISDRETTTYNPSLNSRAVISRDTSKNQLSLQLRSVTTADTAIYFCATARRGQRIYGVVSFGEFFYYYYMDVWGKGTAVTV | YVSPLSVALGETARISCGRQALGSRAVQWYQHKPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTTATLTISGVEVGDEADYYCHMWDSRSGFSWSFGGATRLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPT | 15.886796 | 24.180923 | 235 | 214 | 130 | 208 | 130 | 210 | 54 | pgt124 heavy chain | pgt124 light chain | homo sapiens | homo sapiens | G | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 26 | 11 | 0.92 | HL | train |
8tgo_L | 8tgo | crystal structure of the bg505 triple tandem trimer gp140 hiv-1 env in complex with pgt124 and 35o22 | no | viral protein/immune system | 2023-07-12 | 2024-04-17 | x-ray diffraction | 5.75 | 0.292 | 0.242 | 38582771 | 10.1038/s41541-024-00862-8 | 0 | auth_asym_id | scFv | N.A. | N.A. | L | N.A. | QGQLVQSGATTTKPGSSVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVNMTTDTEVPVTSFTSTGAAYMEIRNLTSDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSSASTGGGGSGGGGSGGGGSGGGGSQSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQSGGLVPRGSHHHHHHHHSRS | N.A. | QGQLVQSGATTTKPGSSVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVNMTTDTEVPVTSFTSTGAAYMEIRNLTSDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSSASTGGGGSGGGGSGGGGSGGGGSQSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVL | N.A. | 17.927242 | 0 | 286 | 0 | 236 | 0 | 264 | 0 | 0 | 35o22 scfv | N.A. | homo sapiens | N.A. | H | protein | envelope glycoprotein gp41 | human immunodeficiency virus 1 | 23 | 7 | 0.7 | H_only | train |
8tgo_S_P | 8tgo | crystal structure of the bg505 triple tandem trimer gp140 hiv-1 env in complex with pgt124 and 35o22 | no | viral protein/immune system | 2023-07-12 | 2024-04-17 | x-ray diffraction | 5.75 | 0.292 | 0.242 | 38582771 | 10.1038/s41541-024-00862-8 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV3 | S | P | QVQLQESGPGLVRPSETLSVTCIVSGGSISNYYWTWIRQSPGKGLEWIGYISDRETTTYNPSLNSRAVISRDTSKNQLSLQLRSVTTADTAIYFCATARRGQRIYGVVSFGEFFYYYYMDVWGKGTAVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SYVSPLSVALGETARISCGRQALGSRAVQWYQHKPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTTATLTISGVEVGDEADYYCHMWDSRSGFSWSFGGATRLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS | QVQLQESGPGLVRPSETLSVTCIVSGGSISNYYWTWIRQSPGKGLEWIGYISDRETTTYNPSLNSRAVISRDTSKNQLSLQLRSVTTADTAIYFCATARRGQRIYGVVSFGEFFYYYYMDVWGKGTAVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | YVSPLSVALGETARISCGRQALGSRAVQWYQHKPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTTATLTISGVEVGDEADYYCHMWDSRSGFSWSFGGATRLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPT | 22.918882 | 24.277056 | 235 | 214 | 230 | 210 | 232 | 210 | 100 | pgt124 heavy chain | pgt124 light chain | homo sapiens | homo sapiens | R | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 26 | 12 | 0.92 | HL | train |
8tgo_b | 8tgo | crystal structure of the bg505 triple tandem trimer gp140 hiv-1 env in complex with pgt124 and 35o22 | no | viral protein/immune system | 2023-07-12 | 2024-04-17 | x-ray diffraction | 5.75 | 0.292 | 0.242 | 38582771 | 10.1038/s41541-024-00862-8 | 0 | auth_asym_id | scFv | N.A. | N.A. | b | N.A. | QGQLVQSGATTTKPGSSVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVNMTTDTEVPVTSFTSTGAAYMEIRNLTSDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSSASTGGGGSGGGGSGGGGSGGGGSQSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQSGGLVPRGSHHHHHHHHSRS | N.A. | QGQLVQSGATTTKPGSSVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVNMTTDTEVPVTSFTSTGAAYMEIRNLTSDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSSASTGGGGSGGGGSGGGGSGGGGSQSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVL | N.A. | 17.991274 | 0 | 286 | 0 | 236 | 0 | 264 | 0 | 0 | 35o22 scfv | N.A. | homo sapiens | N.A. | a | protein | envelope glycoprotein gp41 | human immunodeficiency virus 1 | 25 | 8 | 0.73 | H_only | train |
8tgo_f_c | 8tgo | crystal structure of the bg505 triple tandem trimer gp140 hiv-1 env in complex with pgt124 and 35o22 | no | viral protein/immune system | 2023-07-12 | 2024-04-17 | x-ray diffraction | 5.75 | 0.292 | 0.242 | 38582771 | 10.1038/s41541-024-00862-8 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV3 | f | c | QVQLQESGPGLVRPSETLSVTCIVSGGSISNYYWTWIRQSPGKGLEWIGYISDRETTTYNPSLNSRAVISRDTSKNQLSLQLRSVTTADTAIYFCATARRGQRIYGVVSFGEFFYYYYMDVWGKGTAVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SYVSPLSVALGETARISCGRQALGSRAVQWYQHKPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTTATLTISGVEVGDEADYYCHMWDSRSGFSWSFGGATRLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS | QVQLQESGPGLVRPSETLSVTCIVSGGSISNYYWTWIRQSPGKGLEWIGYISDRETTTYNPSLNSRAVISRDTSKNQLSLQLRSVTTADTAIYFCATARRGQRIYGVVSFGEFFYYYYMDVWGKGTAVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | YVSPLSVALGETARISCGRQALGSRAVQWYQHKPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTTATLTISGVEVGDEADYYCHMWDSRSGFSWSFGGATRLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPT | 22.892555 | 24.242338 | 235 | 214 | 230 | 210 | 232 | 210 | 113 | pgt124 heavy chain | pgt124 light chain | homo sapiens | homo sapiens | e | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 27 | 13 | 0.93 | HL | train |
8tg9_H_L | 8tg9 | complex of npr1 ectodomain with anp plus an allosteric activating antibody, regn5381 | no | immune system | 2023-07-12 | 2024-07-17 | electron microscopy | 3.08 | N.A. | N.A. | 39261724 | 10.1038/s41586-024-07903-1 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | QVQLVQSGAEVKKPGASVTVSCKASGYTFTDYYMHWVRQAPGQGLEWMGWIKPNSGGTNSAQRFQGRITMTWDTSISTAYMELSRLRSDDTAVYYCSRGGPVMNYYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPP | NIQMTQSPSSLSASVGDRVTITCRASQSIDSYLNWYQQKPGKAPKLLIYVASSLQSGVPSRFSGSGSGKDFTLTISSLQPEDFATYYCQQSYSIPTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKKPGASVTVSCKASGYTFTDYYMHWVRQAPGQGLEWMGWIKPNSGGTNSAQRFQGRITMTWDTSISTAYMELSRLRSDDTAVYYCSRGGPVMNYYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV | NIQMTQSPSSLSASVGDRVTITCRASQSIDSYLNWYQQKPGKAPKLLIYVASSLQSGVPSRFSGSGSGKDFTLTISSLQPEDFATYYCQQSYSIPTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.722109 | 23.472782 | 229 | 213 | 214 | 213 | 221 | 213 | 85 | regn5381 fab heavy chain | regn5381 fab light chain | mus musculus | mus musculus | A | protein | atrial natriuretic peptide receptor 1 | homo sapiens | 44 | 17 | 0.81 | HL | train |
8tg9_E_F | 8tg9 | complex of npr1 ectodomain with anp plus an allosteric activating antibody, regn5381 | no | immune system | 2023-07-12 | 2024-07-17 | electron microscopy | 3.08 | N.A. | N.A. | 39261724 | 10.1038/s41586-024-07903-1 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | E | F | QVQLVQSGAEVKKPGASVTVSCKASGYTFTDYYMHWVRQAPGQGLEWMGWIKPNSGGTNSAQRFQGRITMTWDTSISTAYMELSRLRSDDTAVYYCSRGGPVMNYYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPP | NIQMTQSPSSLSASVGDRVTITCRASQSIDSYLNWYQQKPGKAPKLLIYVASSLQSGVPSRFSGSGSGKDFTLTISSLQPEDFATYYCQQSYSIPTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKKPGASVTVSCKASGYTFTDYYMHWVRQAPGQGLEWMGWIKPNSGGTNSAQRFQGRITMTWDTSISTAYMELSRLRSDDTAVYYCSRGGPVMNYYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV | NIQMTQSPSSLSASVGDRVTITCRASQSIDSYLNWYQQKPGKAPKLLIYVASSLQSGVPSRFSGSGSGKDFTLTISSLQPEDFATYYCQQSYSIPTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.770664 | 23.472853 | 229 | 213 | 214 | 213 | 221 | 213 | 81 | regn5381 fab heavy chain | regn5381 fab light chain | mus musculus | mus musculus | B | protein | atrial natriuretic peptide receptor 1 | homo sapiens | 42 | 17 | 0.85 | HL | train |
8tga_H_L | 8tga | complex of npr1 ectodomain and regn5381 fab in an active-like state with no anp bound | no | immune system | 2023-07-12 | 2024-07-17 | electron microscopy | 3.65 | N.A. | N.A. | 39261724 | 10.1038/s41586-024-07903-1 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | QVQLVQSGAEVKKPGASVTVSCKASGYTFTDYYMHWVRQAPGQGLEWMGWIKPNSGGTNSAQRFQGRITMTWDTSISTAYMELSRLRSDDTAVYYCSRGGPVMNYYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPP | NIQMTQSPSSLSASVGDRVTITCRASQSIDSYLNWYQQKPGKAPKLLIYVASSLQSGVPSRFSGSGSGKDFTLTISSLQPEDFATYYCQQSYSIPTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKKPGASVTVSCKASGYTFTDYYMHWVRQAPGQGLEWMGWIKPNSGGTNSAQRFQGRITMTWDTSISTAYMELSRLRSDDTAVYYCSRGGPVMNYYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV | NIQMTQSPSSLSASVGDRVTITCRASQSIDSYLNWYQQKPGKAPKLLIYVASSLQSGVPSRFSGSGSGKDFTLTISSLQPEDFATYYCQQSYSIPTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.708069 | 23.468147 | 229 | 213 | 214 | 213 | 221 | 213 | 90 | regn5381 fab heavy chain | regn5381 fab light chain | mus musculus | mus musculus | A | protein | atrial natriuretic peptide receptor 1 | homo sapiens | 47 | 18 | 0.82 | HL | train |
8tga_E_F | 8tga | complex of npr1 ectodomain and regn5381 fab in an active-like state with no anp bound | no | immune system | 2023-07-12 | 2024-07-17 | electron microscopy | 3.65 | N.A. | N.A. | 39261724 | 10.1038/s41586-024-07903-1 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | E | F | QVQLVQSGAEVKKPGASVTVSCKASGYTFTDYYMHWVRQAPGQGLEWMGWIKPNSGGTNSAQRFQGRITMTWDTSISTAYMELSRLRSDDTAVYYCSRGGPVMNYYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPP | NIQMTQSPSSLSASVGDRVTITCRASQSIDSYLNWYQQKPGKAPKLLIYVASSLQSGVPSRFSGSGSGKDFTLTISSLQPEDFATYYCQQSYSIPTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKKPGASVTVSCKASGYTFTDYYMHWVRQAPGQGLEWMGWIKPNSGGTNSAQRFQGRITMTWDTSISTAYMELSRLRSDDTAVYYCSRGGPVMNYYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV | NIQMTQSPSSLSASVGDRVTITCRASQSIDSYLNWYQQKPGKAPKLLIYVASSLQSGVPSRFSGSGSGKDFTLTISSLQPEDFATYYCQQSYSIPTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.762558 | 23.464539 | 229 | 213 | 214 | 213 | 221 | 213 | 80 | regn5381 fab heavy chain | regn5381 fab light chain | mus musculus | mus musculus | B | protein | atrial natriuretic peptide receptor 1 | homo sapiens | 45 | 18 | 0.78 | HL | train |
8th4_B | 8th4 | structure of at118-l nanobody antagonist in complex with the angiotensin ii type i receptor and losartan | yes | signaling protein/immune system | 2023-07-13 | 2024-05-22 | electron microscopy | 3.3 | N.A. | N.A. | 38744986 | 10.1038/s41589-024-01620-6 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGYIYSRYRMGWYRQAPGKGREFVAAISGGSSTNYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAYKIDSNPRVYWGQGTQVTVSSGKPIPNPLLGLDSTLEHHHHHH | N.A. | LVESGGGLVQPGGSLRLSCAASGYIYSRYRMGWYRQAPGKGREFVAAISGGSSTNYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAYKIDSNPRVYWGQGTQVT | N.A. | 13.503119 | 0 | 140 | 0 | 112 | 0 | 112 | 0 | 0 | at118-l nanobody | N.A. | synthetic construct | N.A. | A | protein | type-1 angiotensin ii receptor soluble cytochrome b562 complex | homo sapiens | 56 | 14 | 0.54 | H_only | train |
8th4_C_D | 8th4 | structure of at118-l nanobody antagonist in complex with the angiotensin ii type i receptor and losartan | yes | signaling protein/immune system | 2023-07-13 | 2024-05-22 | electron microscopy | 3.3 | N.A. | N.A. | 38744986 | 10.1038/s41589-024-01620-6 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | C | D | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTV | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVE | 13.966633 | 13.103357 | 231 | 215 | 122 | 106 | 122 | 106 | 54 | bag2 anti-bril fab heavy chain | bag2 anti-bril fab light chain | synthetic construct | synthetic construct | A | protein | type-1 angiotensin ii receptor soluble cytochrome b562 complex | homo sapiens | 38 | 16 | 0.76 | HL | train |
8k2w_N | 8k2w | structure of cxcr3 complexed with antagonist amg487 | no | signaling protein | 2023-07-14 | 2023-11-29 | electron microscopy | 3 | N.A. | N.A. | 38012179 | 10.1038/s41421-023-00617-0 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAMAQVQLQESGGGLVQAGESLRLSCAASGTIFRLYDMGWYRRVSGNQRELVASITSGGSTKYGDSVKGRFTISRDNAKNTVYLQMSSLKPEDTAVYYCNAEYRTGIWEELLDGWGQGTQVTVSSHHHHHHHH | N.A. | QVQLQESGGGLVQAGESLRLSCAASGTIFRLYDMGWYRRVSGNQRELVASITSGGSTKYGDSVKGRFTISRDNAKNTVYLQMSSLKPEDTAVYYCNAEYRTGIWEELLDGWGQGTQVTV | N.A. | 14.383472 | 0 | 169 | 0 | 101 | 0 | 119 | 0 | 0 | nb6 | N.A. | lama glama | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
8k2x_S | 8k2x | cxcr3-dngi complex activated by cxcl10 | no | signaling protein | 2023-07-14 | 2023-11-29 | electron microscopy | 3.2 | N.A. | N.A. | 38012179 | 10.1038/s41421-023-00617-0 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.503576 | 0 | 259 | 0 | 232 | 0 | 246 | 0 | 0 | single-chain variable fragment scfv16 | N.A. | oplophorus gracilirostris | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 29;24 | 16;10 | 0.89;0.77 | H_only | train |
8k3a_B | 8k3a | sod1 and nanobody2 complex | no | oxidoreductase/immune system | 2023-07-14 | 2024-07-17 | x-ray diffraction | 2.74 | 0.256 | 0.234 | 41350409 | 10.1038/s42003-025-09293-0 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | SQVQLQESGGGSVQAGGSLRLACVASGGDTRPYITYWMGWYRQAPGKEREGVATIYTGGSGTYYSDSVEGRFTISQDKAQRTVYLQMNDLKPEDTAMYYCAAGNGALPPGRRLSPQNMDTWGPGTQVTVSS | N.A. | SQVQLQESGGGSVQAGGSLRLACVASGGDTRPYITYWMGWYRQAPGKEREGVATIYTGGSGTYYSDSVEGRFTISQDKAQRTVYLQMNDLKPEDTAMYYCAAGNGALPPGRRLSPQNMDTWGPGTQVTVSS | N.A. | 14.113023 | 0 | 131 | 0 | 131 | 0 | 131 | 0 | 0 | nb2 | N.A. | camelus dromedarius | N.A. | A | protein | superoxide dismutase [cu-zn] | homo sapiens | 31 | 15 | 0.83 | H_only | train |
8the_H_L | 8the | cryo-em structure of pseudomonas aeruginosa tonb-dependent transporter phur in complex with synthetic antibody and heme | no | membrane protein | 2023-07-15 | 2024-01-31 | electron microscopy | 2.5 | N.A. | N.A. | 38325368 | 10.1016/j.str.2024.01.007 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNFYYYSIHWVRQAPGKGLEWVASISPYYGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSMNWYYSSPYGMSQGMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQGSSSPLTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | ISEVQLVESGGGLVQPGGSLRLSCAASGFNFYYYSIHWVRQAPGKGLEWVASISPYYGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSMNWYYSSPYGMSQGMDYWGQGTLVTV | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQGSSSPLTFGQGTKVEIK | 14.693687 | 13.07123 | 238 | 215 | 127 | 107 | 127 | 107 | 48 | synthetic antibody heavy chain | synthetic antibody light chain | homo sapiens | homo sapiens | A | protein | heme/hemoglobin uptake outer membrane receptor phur | pseudomonas aeruginosa | 57 | 23 | 0.85 | HL | train |
8k3l_B | 8k3l | sod1 and nanobody3 complex | no | oxidoreductase/immune system | 2023-07-16 | 2024-07-17 | x-ray diffraction | 2.3 | 0.235 | 0.195 | 41350409 | 10.1038/s42003-025-09293-0 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGLPYRTVFMGWFRQGPGKEREGVAVINADGVSTYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYHCAANHFFDYSRDPLATAEYNYWGQGTQVTVSS | N.A. | LQESGGGLVQAGGSLRLSCAASGLPYRTVFMGWFRQGPGKEREGVAVINADGVSTYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYHCAANHFFDYSRDPLATAEYNYWGQGTQVTVSS | N.A. | 13.639442 | 0 | 127 | 0 | 122 | 0 | 124 | 0 | 0 | nb3 | N.A. | camelus dromedarius | N.A. | A | protein | superoxide dismutase [cu-zn] | homo sapiens | 41 | 19 | 0.95 | H_only | train |
8k3l_D | 8k3l | sod1 and nanobody3 complex | no | oxidoreductase/immune system | 2023-07-16 | 2024-07-17 | x-ray diffraction | 2.3 | 0.235 | 0.195 | 41350409 | 10.1038/s42003-025-09293-0 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGLPYRTVFMGWFRQGPGKEREGVAVINADGVSTYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYHCAANHFFDYSRDPLATAEYNYWGQGTQVTVSS | N.A. | LQESGGGLVQAGGSLRLSCAASGLPYRTVFMGWFRQGPGKEREGVAVINADGVSTYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYHCAANHFFDYSRDPLATAEYNYWGQGTQVTVSS | N.A. | 13.704781 | 0 | 127 | 0 | 123 | 0 | 124 | 0 | 0 | nb3 | N.A. | camelus dromedarius | N.A. | C | protein | superoxide dismutase [cu-zn] | homo sapiens | 43 | 19 | 0.95 | H_only | train |
8k3l_F | 8k3l | sod1 and nanobody3 complex | no | oxidoreductase/immune system | 2023-07-16 | 2024-07-17 | x-ray diffraction | 2.3 | 0.235 | 0.195 | 41350409 | 10.1038/s42003-025-09293-0 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGLPYRTVFMGWFRQGPGKEREGVAVINADGVSTYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYHCAANHFFDYSRDPLATAEYNYWGQGTQVTVSS | N.A. | LQESGGGLVQAGGSLRLSCAASGLPYRTVFMGWFRQGPGKEREGVAVINADGVSTYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYHCAANHFFDYSRDPLATAEYNYWGQGTQVTVSS | N.A. | 13.473555 | 0 | 127 | 0 | 115 | 0 | 124 | 0 | 0 | nb3 | N.A. | camelus dromedarius | N.A. | E | protein | superoxide dismutase [cu-zn] | homo sapiens | 43 | 19 | 0.95 | H_only | train |
8k3l_H | 8k3l | sod1 and nanobody3 complex | no | oxidoreductase/immune system | 2023-07-16 | 2024-07-17 | x-ray diffraction | 2.3 | 0.235 | 0.195 | 41350409 | 10.1038/s42003-025-09293-0 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | H | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGLPYRTVFMGWFRQGPGKEREGVAVINADGVSTYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYHCAANHFFDYSRDPLATAEYNYWGQGTQVTVSS | N.A. | QLQESGGGLVQAGGSLRLSCAASGLPYRTVFMGWFRQGPGKEREGVAVINADGVSTYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYHCAANHFFDYSRDPLATAEYNYWGQGTQVTVSS | N.A. | 13.695797 | 0 | 127 | 0 | 125 | 0 | 125 | 0 | 0 | nb3 | N.A. | camelus dromedarius | N.A. | G | protein | superoxide dismutase [cu-zn] | homo sapiens | 45 | 20 | 0.91 | H_only | train |
8thl_F | 8thl | cryo-em structure of epinephrine-bound alpha-1a-adrenergic receptor in complex with heterotrimeric gq-protein | no | signaling protein | 2023-07-17 | 2023-08-16 | electron microscopy | 3.1 | N.A. | N.A. | 37563160 | 10.1038/s41467-023-40524-2 | 0 | auth_asym_id | scFv | N.A. | N.A. | F | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAALEVLFQGPHHHHHHHH | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.302149 | 0 | 267 | 0 | 232 | 0 | 247 | 0 | 0 | single fab chain (scfv16) | N.A. | homo sapiens | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-2,guanine nucleotide-binding protein g(s) subunit alpha isoforms short,guanine nucleotide-binding protein g(q) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 32;24 | 19;10 | 0.9;0.77 | H_only | train |
8k46_E | 8k46 | a potent and broad-spectrum neutralizing nanobody for sars-cov-2 viruses including all major omicron strains | yes | viral protein/immune system | 2023-07-17 | 2023-12-13 | electron microscopy | 3.37 | N.A. | N.A. | 37901798 | 10.1002/mco2.397 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | SAVQLQASGGGFVQPGGSLRLSCAASGWAETFGHMGWFRQAPGKEREFVSAIDWWDTVHYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTATYYCAYWDMDYLQNSIPVDYWGQGTQVTVSS | N.A. | SAVQLQASGGGFVQPGGSLRLSCAASGWAETFGHMGWFRQAPGKEREFVSAIDWWDTVHYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTATYYCAYWDMDYLQNSIPVDYWGQGTQVTVSS | N.A. | 14.131686 | 0 | 124 | 0 | 124 | 0 | 124 | 0 | 0 | nanobody nb4 | N.A. | vicugna pacos | N.A. | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 41 | 9 | 0.53 | H_only | train |
8k46_G | 8k46 | a potent and broad-spectrum neutralizing nanobody for sars-cov-2 viruses including all major omicron strains | yes | viral protein/immune system | 2023-07-17 | 2023-12-13 | electron microscopy | 3.37 | N.A. | N.A. | 37901798 | 10.1002/mco2.397 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | G | N.A. | SAVQLQASGGGFVQPGGSLRLSCAASGWAETFGHMGWFRQAPGKEREFVSAIDWWDTVHYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTATYYCAYWDMDYLQNSIPVDYWGQGTQVTVSS | N.A. | SAVQLQASGGGFVQPGGSLRLSCAASGWAETFGHMGWFRQAPGKEREFVSAIDWWDTVHYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTATYYCAYWDMDYLQNSIPVDYWGQGTQVTVSS | N.A. | 14.201813 | 0 | 124 | 0 | 124 | 0 | 124 | 0 | 0 | nanobody nb4 | N.A. | vicugna pacos | N.A. | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 30 | 7 | 0.58 | H_only | train |
8k46_I | 8k46 | a potent and broad-spectrum neutralizing nanobody for sars-cov-2 viruses including all major omicron strains | yes | viral protein/immune system | 2023-07-17 | 2023-12-13 | electron microscopy | 3.37 | N.A. | N.A. | 37901798 | 10.1002/mco2.397 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | I | N.A. | SAVQLQASGGGFVQPGGSLRLSCAASGWAETFGHMGWFRQAPGKEREFVSAIDWWDTVHYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTATYYCAYWDMDYLQNSIPVDYWGQGTQVTVSS | N.A. | SAVQLQASGGGFVQPGGSLRLSCAASGWAETFGHMGWFRQAPGKEREFVSAIDWWDTVHYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTATYYCAYWDMDYLQNSIPVDYWGQGTQVTVSS | N.A. | 13.907596 | 0 | 124 | 0 | 124 | 0 | 124 | 0 | 0 | nanobody nb4 | N.A. | vicugna pacos | N.A. | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 45 | 10 | 0.53 | H_only | train |
8k47_I | 8k47 | a potent and broad-spectrum neutralizing nanobody for sars-cov-2 viruses including all major omicron strains | yes | viral protein/immune system | 2023-07-17 | 2023-12-13 | electron microscopy | 3.54 | N.A. | N.A. | 37901798 | 10.1002/mco2.397 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | I | N.A. | SAVQLQASGGGFVQPGGSLRLSCAASGWAETFGHMGWFRQAPGKEREFVSAIDWWDTVHYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTATYYCAYWDMDYLQNSIPVDYWGQGTQVTVSS | N.A. | SAVQLQASGGGFVQPGGSLRLSCAASGWAETFGHMGWFRQAPGKEREFVSAIDWWDTVHYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTATYYCAYWDMDYLQNSIPVDYWGQGTQVTVSS | N.A. | 14.004035 | 0 | 124 | 0 | 124 | 0 | 124 | 0 | 0 | nanobody nb4 | N.A. | vicugna pacos | N.A. | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 52 | 11 | 0.55 | H_only | train |
8k3z_S | 8k3z | cryo-em structure of cxcr4 in complex with cxcl12 | no | immune system | 2023-07-17 | 2024-07-17 | electron microscopy | 2.81 | N.A. | N.A. | 39093700 | 10.1016/j.celrep.2024.114578 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.5735 | 0 | 247 | 0 | 233 | 0 | 247 | 0 | 0 | scfv16 | N.A. | vicugna pacos | N.A. | C;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 28;25 | 17;10 | 1.0;0.77 | H_only | train |
8pul_A_B | 8pul | chilob 7/4 h2 hc-k223c/c224s kappa lc-c214s f(ab')2 | no | immune system | 2023-07-17 | 2025-03-05 | x-ray diffraction | 1.93 | 0.239 | 0.203 | 40221417 | 10.1038/s41467-025-58773-8 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | A | B | EVQLQQSGPDLVKPGASVKISCKTSGYTFTEYIMHWVKQSHGKSLEWIGGIIPNNGGTSYNQKFKDKATMTVDKSSSTGYMELRSLTSEDSAVYYCTRREVYGRNYYALDYWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSNFGTQTYTCNVDHKPSNTKVDKTVERCSCVECPPC | DIQMTQTTSSLSASLGDRVTITCSASQGINNYLNWYQQKPDGTVKLLIYYTSSLHSGVPSRFSGSGSGTDYSLTISNLEPEDIATYYCQQYSNLPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGES | EVQLQQSGPDLVKPGASVKISCKTSGYTFTEYIMHWVKQSHGKSLEWIGGIIPNNGGTSYNQKFKDKATMTVDKSSSTGYMELRSLTSEDSAVYYCTRREVYGRNYYALDYWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSNFGTQTYTCNVDHKPSNTKVDKTVERCSCVEC | DIQMTQTTSSLSASLGDRVTITCSASQGINNYLNWYQQKPDGTVKLLIYYTSSLHSGVPSRFSGSGSGTDYSLTISNLEPEDIATYYCQQYSNLPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.48528 | 23.355944 | 231 | 214 | 228 | 213 | 228 | 213 | 103 | chilob 7/4 h2 heavy chain k223c/c224s | chilob 7/4 h2 kappa chain c214s | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8pul_C_D | 8pul | chilob 7/4 h2 hc-k223c/c224s kappa lc-c214s f(ab')2 | no | immune system | 2023-07-17 | 2025-03-05 | x-ray diffraction | 1.93 | 0.239 | 0.203 | 40221417 | 10.1038/s41467-025-58773-8 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | C | D | EVQLQQSGPDLVKPGASVKISCKTSGYTFTEYIMHWVKQSHGKSLEWIGGIIPNNGGTSYNQKFKDKATMTVDKSSSTGYMELRSLTSEDSAVYYCTRREVYGRNYYALDYWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSNFGTQTYTCNVDHKPSNTKVDKTVERCSCVECPPC | DIQMTQTTSSLSASLGDRVTITCSASQGINNYLNWYQQKPDGTVKLLIYYTSSLHSGVPSRFSGSGSGTDYSLTISNLEPEDIATYYCQQYSNLPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGES | EVQLQQSGPDLVKPGASVKISCKTSGYTFTEYIMHWVKQSHGKSLEWIGGIIPNNGGTSYNQKFKDKATMTVDKSSSTGYMELRSLTSEDSAVYYCTRREVYGRNYYALDYWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSNFGTQTYTCNVDHKPSNTKVDKTVERCSC | DIQMTQTTSSLSASLGDRVTITCSASQGINNYLNWYQQKPDGTVKLLIYYTSSLHSGVPSRFSGSGSGTDYSLTISNLEPEDIATYYCQQYSNLPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 21.412853 | 23.447023 | 231 | 214 | 213 | 213 | 225 | 213 | 93 | chilob 7/4 h2 heavy chain k223c/c224s | chilob 7/4 h2 kappa chain c214s | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8tii_H_L | 8tii | human ackr3 phosphorylated by grk2 in complex with arrestin2 in nanodisc | no | signaling protein/immune system | 2023-07-19 | 2025-01-22 | electron microscopy | 3 | N.A. | N.A. | 40399676 | 10.1038/s41586-025-09024-9 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSSSYIHWVRQAPGKGLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARKSMYHRGWGWLSWVYGAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYYYPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNVSSSYIHWVRQAPGKGLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARKSMYHRGWGWLSWVYGAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVE | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYYYPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 23.269384 | 22.601078 | 240 | 215 | 212 | 204 | 228 | 211 | 87 | fab7 heavy chain | fab7 light chain | synthetic construct | synthetic construct | A | protein | beta-arrestin-1 | bos taurus | 49 | 16 | 0.84 | HL | train |
8tii_N | 8tii | human ackr3 phosphorylated by grk2 in complex with arrestin2 in nanodisc | no | signaling protein/immune system | 2023-07-19 | 2025-01-22 | electron microscopy | 3 | N.A. | N.A. | 40399676 | 10.1038/s41586-025-09024-9 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | GSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSS | N.A. | VQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTV | N.A. | 13.624491 | 0 | 123 | 0 | 118 | 0 | 118 | 0 | 0 | anti-fab nanobody | N.A. | synthetic construct | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
8tin_H_L | 8tin | human ackr3 phosphorylated by grk2 in complex with arrestin3 reconstructed without receptor/micelle | no | signaling protein/immune system | 2023-07-19 | 2025-01-22 | electron microscopy | 4 | N.A. | N.A. | 40399676 | 10.1038/s41586-025-09024-9 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSSSYIHWVRQAPGKGLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARKSMYHRGWGWLSWVYGAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYYYPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNVSSSYIHWVRQAPGKGLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARKSMYHRGWGWLSWVYGAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVE | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYYYPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.994947 | 22.214262 | 240 | 215 | 212 | 204 | 228 | 211 | 91 | fab7 heavy chain | fab7 light chain | synthetic construct | synthetic construct | A | protein | beta-arrestin-2 | bos taurus | 46 | 17 | 0.85 | HL | train |
8k4q_B | 8k4q | crystal structure of nanobody hunb103 bound to human interleukin-4 receptor subunit alpha | no | cytokine | 2023-07-20 | 2024-06-26 | x-ray diffraction | 2.59 | 0.28 | 0.222 | 38871183 | 10.1016/j.jaci.2024.05.027 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | GSEVQLQESGGGLVQPGGSLRLSCAASGSTSYRYCMAWFRQAPGKGLEAVASIRPRSGRAYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAMYYCAASDNDGNCQDYWGKGTLVTVSS | N.A. | EVQLQESGGGLVQPGGSLRLSCAASGSTSYRYCMAWFRQAPGKGLEAVASIRPRSGRAYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAMYYCAASDNDGNCQDYWGKGTLVTVS | N.A. | 13.548547 | 0 | 121 | 0 | 118 | 0 | 118 | 0 | 0 | il-4r nanobody hunb103 | N.A. | camelus dromedarius | N.A. | A | protein | interleukin-4 receptor subunit alpha | homo sapiens | 36 | 10 | 0.45 | H_only | train |
8k4q_D | 8k4q | crystal structure of nanobody hunb103 bound to human interleukin-4 receptor subunit alpha | no | cytokine | 2023-07-20 | 2024-06-26 | x-ray diffraction | 2.59 | 0.28 | 0.222 | 38871183 | 10.1016/j.jaci.2024.05.027 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | GSEVQLQESGGGLVQPGGSLRLSCAASGSTSYRYCMAWFRQAPGKGLEAVASIRPRSGRAYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAMYYCAASDNDGNCQDYWGKGTLVTVSS | N.A. | EVQLQESGGGLVQPGGSLRLSCAASGSTSYRYCMAWFRQAPGKGLEAVASIRPRSGRAYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAMYYCAASDNDGNCQDYWGKGTLVTVS | N.A. | 13.554117 | 0 | 121 | 0 | 118 | 0 | 118 | 0 | 0 | il-4r nanobody hunb103 | N.A. | camelus dromedarius | N.A. | C | protein | interleukin-4 receptor subunit alpha | homo sapiens | 36 | 9 | 0.41 | H_only | train |
8tjf_B_A | 8tjf | monovalent bispecific igg antibodies through novel electrostatic steering mutations at the ch1-cl interface | no | immune system | 2023-07-21 | 2023-11-22 | x-ray diffraction | 2.3 | 0.251 | 0.208 | 37930310 | 10.1080/19420862.2023.2273449 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | B | A | EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSASTKGPSVCPLAPSSKSTSGGTADLGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSVD | DIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKGQPKAAPSVRLFPPCSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEVS | EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSASTKGPSVCPLAPSSKSTSGGTADLGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | DIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKGQPKAAPSVRLFPPCSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 24.251999 | 23.146847 | 224 | 213 | 220 | 210 | 220 | 210 | 82 | igg1 fab heavy chain | fab lambda light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8tjf_H_L | 8tjf | monovalent bispecific igg antibodies through novel electrostatic steering mutations at the ch1-cl interface | no | immune system | 2023-07-21 | 2023-11-22 | x-ray diffraction | 2.3 | 0.251 | 0.208 | 37930310 | 10.1080/19420862.2023.2273449 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSASTKGPSVCPLAPSSKSTSGGTADLGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSVD | DIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKGQPKAAPSVRLFPPCSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEVS | EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSASTKGPSVCPLAPSSKSTSGGTADLGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | DIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKGQPKAAPSVRLFPPCSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE | 23.835531 | 23.50847 | 224 | 213 | 215 | 211 | 221 | 211 | 89 | igg1 fab heavy chain | fab lambda light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8k5h_H_L | 8k5h | structure of the sars-cov-2 ba.1 spike with ut28-rd | yes | viral protein/immune system | 2023-07-21 | 2023-12-27 | electron microscopy | 3.22 | N.A. | N.A. | 38228146 | 10.1016/j.str.2023.12.013 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | H | L | QMQLVQSGPEVKKPGTSVKVSCKASGFRFSISAVQWVRQARGQRLEWIGWIVVGSGDTNYAQKFQERVTITRDMSTSTAYMELSSLRFEDTAVYYCAAPYCGGDCSDGFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPEGSSGHHHHHHHHHH | METPAQLLFLLLLWLPDTTGEIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGNSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | MQLVQSGPEVKKPGTSVKVSCKASGFRFSISAVQWVRQARGQRLEWIGWIVVGSGDTNYAQKFQERVTITRDMSTSTAYMELSSLRFEDTAVYYCAAPYCGGDCSDGFDIWGQGTMVTVSSA | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGNSPWTFGQGTKVEI | 14.400288 | 13.346356 | 252 | 235 | 122 | 107 | 122 | 107 | 40 | ut28k-rd fab heavy chain | ut28k-rd fab light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 34 | 17 | 0.85 | HL | train |
8pwv_B | 8pwv | pfrh5 bound to monoclonal antibody mad8-502 | yes | cell adhesion | 2023-07-21 | 2024-06-05 | x-ray diffraction | 2.07 | 0.279 | 0.269 | 39059381 | 10.1016/j.cell.2024.06.037 | 0 | auth_asym_id | scFv | N.A. | N.A. | B | N.A. | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAINWVRQAPGQGPEWLGGIIPILDRVNYAQKFQGRVTITADELGGTAYMELTSLRSEDTAMYYCARLADGPFDYWGQGTQVIVSSGGGGSGGGGSGGGGSNIVMTQTPLSLSVSPGQPASISCKSSQSLLHSDGQTYMYWYLQKPGQSPQLLISEVSSRFSGVPDRFSGSGSGTTFTLKISRVEAEDVGVYYCMQAKDPYSFGQGTKLEIKGTKHHHHHH | N.A. | VQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAINWVRQAPGQGPEWLGGIIPILDRVNYAQKFQGRVTITADELGGTAYMELTSLRSEDTAMYYCARLADGPFDYWGQGTQVIVSSGGGGSGGGGSGGGGSNIVMTQTPLSLSVSPGQPASISCKSSQSLLHSDGQTYMYWYLQKPGQSPQLLISEVSSRFSGVPDRFSGSGSGTTFTLKISRVEAEDVGVYYCMQAKDPYSFGQGTKLEIK | N.A. | 17.425705 | 0 | 252 | 0 | 227 | 0 | 242 | 0 | 0 | monoclonal antibody mad8-502 | N.A. | homo sapiens | N.A. | A | protein | reticulocyte-binding protein homolog 5 | plasmodium falciparum 3d7 | 38 | 18 | 0.86 | H_only | train |
8pwv_D | 8pwv | pfrh5 bound to monoclonal antibody mad8-502 | yes | cell adhesion | 2023-07-21 | 2024-06-05 | x-ray diffraction | 2.07 | 0.279 | 0.269 | 39059381 | 10.1016/j.cell.2024.06.037 | 0 | auth_asym_id | scFv | N.A. | N.A. | D | N.A. | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAINWVRQAPGQGPEWLGGIIPILDRVNYAQKFQGRVTITADELGGTAYMELTSLRSEDTAMYYCARLADGPFDYWGQGTQVIVSSGGGGSGGGGSGGGGSNIVMTQTPLSLSVSPGQPASISCKSSQSLLHSDGQTYMYWYLQKPGQSPQLLISEVSSRFSGVPDRFSGSGSGTTFTLKISRVEAEDVGVYYCMQAKDPYSFGQGTKLEIKGTKHHHHHH | N.A. | VQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAINWVRQAPGQGPEWLGGIIPILDRVNYAQKFQGRVTITADELGGTAYMELTSLRSEDTAMYYCARLADGPFDYWGQGTQVIVSSGGGGSGGGGSGGGGSNIVMTQTPLSLSVSPGQPASISCKSSQSLLHSDGQTYMYWYLQKPGQSPQLLISEVSSRFSGVPDRFSGSGSGTTFTLKISRVEAEDVGVYYCMQAKDPYSFGQGTKLEIK | N.A. | 17.49689 | 0 | 252 | 0 | 227 | 0 | 242 | 0 | 0 | monoclonal antibody mad8-502 | N.A. | homo sapiens | N.A. | C | protein | reticulocyte-binding protein homolog 5 | plasmodium falciparum 3d7 | 38 | 19 | 0.86 | H_only | train |
8pwv_F | 8pwv | pfrh5 bound to monoclonal antibody mad8-502 | yes | cell adhesion | 2023-07-21 | 2024-06-05 | x-ray diffraction | 2.07 | 0.279 | 0.269 | 39059381 | 10.1016/j.cell.2024.06.037 | 0 | auth_asym_id | scFv | N.A. | N.A. | F | N.A. | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAINWVRQAPGQGPEWLGGIIPILDRVNYAQKFQGRVTITADELGGTAYMELTSLRSEDTAMYYCARLADGPFDYWGQGTQVIVSSGGGGSGGGGSGGGGSNIVMTQTPLSLSVSPGQPASISCKSSQSLLHSDGQTYMYWYLQKPGQSPQLLISEVSSRFSGVPDRFSGSGSGTTFTLKISRVEAEDVGVYYCMQAKDPYSFGQGTKLEIKGTKHHHHHH | N.A. | VQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAINWVRQAPGQGPEWLGGIIPILDRVNYAQKFQGRVTITADELGGTAYMELTSLRSEDTAMYYCARLADGPFDYWGQGTQVIVSSGGGGSGGGGSGGGGSNIVMTQTPLSLSVSPGQPASISCKSSQSLLHSDGQTYMYWYLQKPGQSPQLLISEVSSRFSGVPDRFSGSGSGTTFTLKISRVEAEDVGVYYCMQAKDPYSFGQGTKLEI | N.A. | 17.368412 | 0 | 252 | 0 | 226 | 0 | 241 | 0 | 0 | monoclonal antibody mad8-502 | N.A. | homo sapiens | N.A. | E | protein | reticulocyte-binding protein homolog 5 | plasmodium falciparum 3d7 | 39 | 19 | 0.83 | H_only | train |
8pwv_H | 8pwv | pfrh5 bound to monoclonal antibody mad8-502 | yes | cell adhesion | 2023-07-21 | 2024-06-05 | x-ray diffraction | 2.07 | 0.279 | 0.269 | 39059381 | 10.1016/j.cell.2024.06.037 | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAINWVRQAPGQGPEWLGGIIPILDRVNYAQKFQGRVTITADELGGTAYMELTSLRSEDTAMYYCARLADGPFDYWGQGTQVIVSSGGGGSGGGGSGGGGSNIVMTQTPLSLSVSPGQPASISCKSSQSLLHSDGQTYMYWYLQKPGQSPQLLISEVSSRFSGVPDRFSGSGSGTTFTLKISRVEAEDVGVYYCMQAKDPYSFGQGTKLEIKGTKHHHHHH | N.A. | QLVQSGAEVKKPGSSVKVSCKASGGTFSSYAINWVRQAPGQGPEWLGGIIPILDRVNYAQKFQGRVTITADELGGTAYMELTSLRSEDTAMYYCARLADGPFDYWGQGTQVIVSSGGGGSGGGGSGGGGSNIVMTQTPLSLSVSPGQPASISCKSSQSLLHSDGQTYMYWYLQKPGQSPQLLISEVSSRFSGVPDRFSGSGSGTTFTLKISRVEAEDVGVYYCMQAKDPYSFGQGTKLEIK | N.A. | 17.425339 | 0 | 252 | 0 | 226 | 0 | 241 | 0 | 0 | monoclonal antibody mad8-502 | N.A. | homo sapiens | N.A. | G | protein | reticulocyte-binding protein homolog 5 | plasmodium falciparum 3d7 | 40 | 18 | 0.82 | H_only | train |
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