PDB_ID_chain stringlengths 6 10 | PDB_ID stringlengths 4 4 | Title stringlengths 4 230 | Mutation(s) stringclasses 2
values | Classification stringclasses 305
values | Deposit_date stringdate 1976-03-17 00:00:00 2026-01-20 00:00:00 | Release_date stringdate 1976-05-19 00:00:00 2026-02-25 00:00:00 | Method stringclasses 5
values | Resolution stringclasses 459
values | R_free stringclasses 227
values | R_work stringclasses 211
values | PMID stringlengths 4 8 | DOI stringlengths 4 68 | Model_index int64 0 76 | Asym_ID_type stringclasses 2
values | Ab_type stringclasses 30
values | H_subgroup stringclasses 8
values | L_subgroup stringclasses 19
values | H_chain_ID stringclasses 60
values | L_chain_ID stringclasses 58
values | H_fas_seq stringlengths 4 919 | L_fas_seq stringlengths 4 627 | H_filled_pdb_seq stringlengths 4 896 | L_filled_pdb_seq stringlengths 4 523 | H_mean_radius float64 0 79.7 | L_mean_radius float64 0 84.3 | H_fas_seq_len int64 0 919 | L_fas_seq_len int64 0 627 | H_pdb_seq_len int64 0 879 | L_pdb_seq_len int64 0 523 | H_filled_seq_len int64 0 896 | L_filled_seq_len int64 0 523 | HL_inf_res_num int64 0 175 | H_mol_name stringlengths 2 331 | L_mol_name stringlengths 2 151 | H_species stringclasses 68
values | L_species stringclasses 42
values | Ag_chain_ID(s) stringclasses 279
values | Ag_type(s) stringclasses 16
values | Ag_mol_name(s) stringlengths 2 390 | Ag_species stringclasses 743
values | Ab_ag_inf_res_num stringlengths 1 11 | CDR_inf_res_num stringclasses 444
values | CDR_inf_res_ratio stringlengths 1 19 | hl_label stringclasses 3
values | split stringclasses 1
value |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
8pwx_A | 8pwx | pfrh5 bound to monoclonal antibody r5.008 | yes | cell adhesion | 2023-07-21 | 2024-06-05 | x-ray diffraction | 3.2 | 0.293 | 0.24 | 39059381 | 10.1016/j.cell.2024.06.037 | 0 | auth_asym_id | scFv | N.A. | N.A. | A | N.A. | MGILPSPGMPALLSLVSLLSVLLMGCVAETGEVQLVESGGGVVQPGRSLRLSCAASGFAFSSYGMHWVRQAPGKGLEWVALIWSDGSNKDYADSVKGRFTISRDNSKSTLSLQMNSLRAEDTAVYYCARGKEEYYGSGGSDYWGQGTLITVSSGGGGSGGGGSGGGGSDIVMTQSPSSLSASVGDRVTITCRASQSISSYLHWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPADFATYYCQQSYSTPPTFGGGTKVEIRGTKHHHHHH | N.A. | EVQLVESGGGVVQPGRSLRLSCAASGFAFSSYGMHWVRQAPGKGLEWVALIWSDGSNKDYADSVKGRFTISRDNSKSTLSLQMNSLRAEDTAVYYCARGKEEYYGSGGSDYWGQGTLITVSSGGGGSGGGGSGGGGSDIVMTQSPSSLSASVGDRVTITCRASQSISSYLHWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPADFATYYCQQSYSTPPTFGGGTKVEI | N.A. | 17.268267 | 0 | 284 | 0 | 229 | 0 | 243 | 0 | 0 | scfv fragment for antibody r5.008 | N.A. | homo sapiens | N.A. | B | protein | reticulocyte-binding protein homolog 5 | plasmodium falciparum 3d7 | 34 | 15 | 0.94 | H_only | train |
8tjo_C_D | 8tjo | crosslinked 6-deoxyerythronolide b synthase (debs) module 1 in complex with antibody fragment 1b2: crosslinked intra-state 1 | no | biosynthetic protein/immune system | 2023-07-23 | 2024-07-24 | electron microscopy | 3.61 | N.A. | N.A. | 39179672 | 10.1038/s41589-024-01709-y | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV2 | C | D | MAEVQLVQSGGGLVQPGRSLRLSCTASGFTFGDYAMSWVRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTRGGTLFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCAALVPRGSAHHHHHHAADYKDDDDKA | LFAIPLVVPFYSHSALDVVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSLQTPRLTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPRGAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGGGLVQPGRSLRLSCTASGFTFGDYAMSWVRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTRGGTLFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DVVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSLQTPRLTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPRGAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSF | 22.218555 | 22.482214 | 249 | 236 | 205 | 206 | 218 | 215 | 81 | antibody fragment 1b2, heavy chain | antibody fragment 1b2, light chain | homo sapiens | homo sapiens | A;B | protein;protein | eryai,6-deoxyerythronolide-b synthase erya3, modules 5 and 6;eryai,6-deoxyerythronolide-b synthase erya3, modules 5 and 6 | saccharopolyspora erythraea;saccharopolyspora erythraea | 43;21 | 21;7 | 0.84;0.78 | HL | train |
8tjo_E_F | 8tjo | crosslinked 6-deoxyerythronolide b synthase (debs) module 1 in complex with antibody fragment 1b2: crosslinked intra-state 1 | no | biosynthetic protein/immune system | 2023-07-23 | 2024-07-24 | electron microscopy | 3.61 | N.A. | N.A. | 39179672 | 10.1038/s41589-024-01709-y | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV2 | E | F | MAEVQLVQSGGGLVQPGRSLRLSCTASGFTFGDYAMSWVRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTRGGTLFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCAALVPRGSAHHHHHHAADYKDDDDKA | LFAIPLVVPFYSHSALDVVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSLQTPRLTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPRGAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGGGLVQPGRSLRLSCTASGFTFGDYAMSWVRQAPGKGLEWVGFIRSKAYGGTTEYAASVKGRFTISRDDSKSIAYLQMNSLKTEDTAVYYCTRGGTLFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DVVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSLQTPRLTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPRGAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSF | 22.544764 | 22.72547 | 249 | 236 | 205 | 206 | 218 | 215 | 82 | antibody fragment 1b2, heavy chain | antibody fragment 1b2, light chain | homo sapiens | homo sapiens | A;B | protein;protein | eryai,6-deoxyerythronolide-b synthase erya3, modules 5 and 6;eryai,6-deoxyerythronolide-b synthase erya3, modules 5 and 6 | saccharopolyspora erythraea;saccharopolyspora erythraea | 20;42 | 8;21 | 0.8;0.81 | HL | train |
8pxo_D_C | 8pxo | abcg2 in complex with az99 and 5d3 fab | no | transport protein | 2023-07-23 | 2024-11-06 | electron microscopy | 3 | N.A. | N.A. | 39445888 | 10.1021/acschembio.4c00353 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | D | C | QVQLQESGPGLVKPSQSLSLTCTVTGFSITSDYAWNWIRQFPGKKLEWMGYINFDGGTTYNPSLRGRISITRDTSKNQFFLQLRSVTPEDTATYYCATFYGAKGTLDYWGQGTSVTVSSAKTTPPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGP | DIVLTQSPSSFSVSLGDRVTISCKASGYILNRLAWYQQKPGNAPRLLISGATSLETGFPSRFSGTGSGKDYTLSISSLQTEDVGTYYCQQYWSTPWTFGGGTKLEIRRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | VQLQESGPGLVKPSQSLSLTCTVTGFSITSDYAWNWIRQFPGKKLEWMGYINFDGGTTYNPSLRGRISITRDTSKNQFFLQLRSVTPEDTATYYCATFYGAKGTLDYWGQGTSVTVSS | DIVLTQSPSSFSVSLGDRVTISCKASGYILNRLAWYQQKPGNAPRLLISGATSLETGFPSRFSGTGSGKDYTLSISSLQTEDVGTYYCQQYWSTPWTFGGGTKLEIR | 13.792604 | 13.320891 | 221 | 214 | 118 | 107 | 118 | 107 | 42 | 5d3(fab) heavy chain variable domain | 5d3(fab) light chain variable domain | mus musculus | mus musculus | A;B | protein;protein | broad substrate specificity atp-binding cassette transporter abcg2;broad substrate specificity atp-binding cassette transporter abcg2 | homo sapiens;homo sapiens | 21;31 | 13;15 | 1.0;0.94 | HL | train |
8pxo_F_E | 8pxo | abcg2 in complex with az99 and 5d3 fab | no | transport protein | 2023-07-23 | 2024-11-06 | electron microscopy | 3 | N.A. | N.A. | 39445888 | 10.1021/acschembio.4c00353 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | F | E | QVQLQESGPGLVKPSQSLSLTCTVTGFSITSDYAWNWIRQFPGKKLEWMGYINFDGGTTYNPSLRGRISITRDTSKNQFFLQLRSVTPEDTATYYCATFYGAKGTLDYWGQGTSVTVSSAKTTPPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGP | DIVLTQSPSSFSVSLGDRVTISCKASGYILNRLAWYQQKPGNAPRLLISGATSLETGFPSRFSGTGSGKDYTLSISSLQTEDVGTYYCQQYWSTPWTFGGGTKLEIRRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | VQLQESGPGLVKPSQSLSLTCTVTGFSITSDYAWNWIRQFPGKKLEWMGYINFDGGTTYNPSLRGRISITRDTSKNQFFLQLRSVTPEDTATYYCATFYGAKGTLDYWGQGTSVTVSS | DIVLTQSPSSFSVSLGDRVTISCKASGYILNRLAWYQQKPGNAPRLLISGATSLETGFPSRFSGTGSGKDYTLSISSLQTEDVGTYYCQQYWSTPWTFGGGTKLEIR | 13.792387 | 13.3209 | 221 | 214 | 118 | 107 | 118 | 107 | 43 | 5d3(fab) heavy chain variable domain | 5d3(fab) light chain variable domain | mus musculus | mus musculus | A;B | protein;protein | broad substrate specificity atp-binding cassette transporter abcg2;broad substrate specificity atp-binding cassette transporter abcg2 | homo sapiens;homo sapiens | 31;21 | 15;13 | 0.94;1.0 | HL | train |
8tjt_D_A | 8tjt | the fab fragment of an anti-glucagon receptor (gcgr) antibody | no | immune system | 2023-07-24 | 2024-02-14 | x-ray diffraction | 2.7 | 0.252 | 0.204 | 38269489 | 10.1080/19420862.2024.2304282 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | D | A | EVQLVESGGGLVQPGGSLRLSCAASGFNIYYNYIHWVRQAPGKGLEWVAEFSPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSAAIVDWYDYFKGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYGSYLYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNIYYNYIHWVRQAPGKGLEWVAEFSPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSAAIVDWYDYFKGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYGSYLYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.548668 | 22.781857 | 227 | 214 | 221 | 213 | 227 | 213 | 116 | anti-gcgr fab heavy chain | anti-gcgr fab light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8tjt_E_B | 8tjt | the fab fragment of an anti-glucagon receptor (gcgr) antibody | no | immune system | 2023-07-24 | 2024-02-14 | x-ray diffraction | 2.7 | 0.252 | 0.204 | 38269489 | 10.1080/19420862.2024.2304282 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | E | B | EVQLVESGGGLVQPGGSLRLSCAASGFNIYYNYIHWVRQAPGKGLEWVAEFSPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSAAIVDWYDYFKGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYGSYLYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNIYYNYIHWVRQAPGKGLEWVAEFSPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSAAIVDWYDYFKGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYGSYLYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.61252 | 22.686302 | 227 | 214 | 223 | 212 | 227 | 213 | 115 | anti-gcgr fab heavy chain | anti-gcgr fab light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8tjt_F_C | 8tjt | the fab fragment of an anti-glucagon receptor (gcgr) antibody | no | immune system | 2023-07-24 | 2024-02-14 | x-ray diffraction | 2.7 | 0.252 | 0.204 | 38269489 | 10.1080/19420862.2024.2304282 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | F | C | EVQLVESGGGLVQPGGSLRLSCAASGFNIYYNYIHWVRQAPGKGLEWVAEFSPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSAAIVDWYDYFKGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYGSYLYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNIYYNYIHWVRQAPGKGLEWVAEFSPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSAAIVDWYDYFKGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYGSYLYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.692225 | 22.703518 | 227 | 214 | 221 | 212 | 226 | 213 | 114 | anti-gcgr fab heavy chain | anti-gcgr fab light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8tjt_H_L | 8tjt | the fab fragment of an anti-glucagon receptor (gcgr) antibody | no | immune system | 2023-07-24 | 2024-02-14 | x-ray diffraction | 2.7 | 0.252 | 0.204 | 38269489 | 10.1080/19420862.2024.2304282 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLVQPGGSLRLSCAASGFNIYYNYIHWVRQAPGKGLEWVAEFSPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSAAIVDWYDYFKGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYGSYLYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNIYYNYIHWVRQAPGKGLEWVAEFSPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSAAIVDWYDYFKGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYGSYLYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.692556 | 22.505072 | 227 | 214 | 223 | 210 | 227 | 213 | 113 | anti-gcgr fab heavy chain | anti-gcgr fab light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8tjr_H_L | 8tjr | cryo-em structure of hiv-1 bg505ds-sosip.664 env trimer bound to herh-a.01 fab | yes | viral protein/immune system | 2023-07-24 | 2024-07-31 | electron microscopy | 3.29 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV2 | H | L | EVKLVESGGGLVQPGGSLRLSCKASGFTFSDFHIYWFRRPPGRGLEWVGLIRRNSYTGTTNYAASVEGRFTISRDDSKSIAYLHMSSVKTEDTAIYYCSDDEYWGQGVLVTVSS | DIVMTQTPISLPVTPGEPASMSCRSSQSLLHSDGRTYLFWYLLRPAQAPQLLVHDVSKRASGVPERFSGSGSDTDFTLKISRVEAEDVGSYYCMQGTQLPLTFGGGTNVEIK | EVKLVESGGGLVQPGGSLRLSCKASGFTFSDFHIYWFRRPPGRGLEWVGLIRRNSYTGTTNYAASVEGRFTISRDDSKSIAYLHMSSVKTEDTAIYYCSDDEYWGQGVLVTVSS | DIVMTQTPISLPVTPGEPASMSCRSSQSLLHSDGRTYLFWYLLRPAQAPQLLVHDVSKRASGVPERFSGSGSDTDFTLKISRVEAEDVGSYYCMQGTQLPLTFGGGTNVEIK | 13.805662 | 13.844028 | 114 | 112 | 114 | 112 | 114 | 112 | 31 | antibody herh-a.01 heavy chain | antibody herh-a.01 light chain | macaca | macaca | E;F | protein;protein | envelope glycoprotein gp41;envelope glycoprotein gp41 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 38;19 | 18;9 | 0.72;0.9 | HL | train |
8tjr_J_K | 8tjr | cryo-em structure of hiv-1 bg505ds-sosip.664 env trimer bound to herh-a.01 fab | yes | viral protein/immune system | 2023-07-24 | 2024-07-31 | electron microscopy | 3.29 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV2 | J | K | EVKLVESGGGLVQPGGSLRLSCKASGFTFSDFHIYWFRRPPGRGLEWVGLIRRNSYTGTTNYAASVEGRFTISRDDSKSIAYLHMSSVKTEDTAIYYCSDDEYWGQGVLVTVSS | DIVMTQTPISLPVTPGEPASMSCRSSQSLLHSDGRTYLFWYLLRPAQAPQLLVHDVSKRASGVPERFSGSGSDTDFTLKISRVEAEDVGSYYCMQGTQLPLTFGGGTNVEIK | EVKLVESGGGLVQPGGSLRLSCKASGFTFSDFHIYWFRRPPGRGLEWVGLIRRNSYTGTTNYAASVEGRFTISRDDSKSIAYLHMSSVKTEDTAIYYCSDDEYWGQGVLVTVSS | DIVMTQTPISLPVTPGEPASMSCRSSQSLLHSDGRTYLFWYLLRPAQAPQLLVHDVSKRASGVPERFSGSGSDTDFTLKISRVEAEDVGSYYCMQGTQLPLTFGGGTNVEIK | 13.815757 | 13.833784 | 114 | 112 | 114 | 112 | 114 | 112 | 29 | antibody herh-a.01 heavy chain | antibody herh-a.01 light chain | macaca | macaca | F | protein | envelope glycoprotein gp41 | human immunodeficiency virus 1 | 39 | 20 | 0.77 | HL | train |
8tjs_P_S | 8tjs | cryo-em structure of hiv-1 bg505ds-sosip.664 env trimer bound to gpz6-a.01 fab | yes | viral protein/immune system | 2023-07-24 | 2024-07-31 | electron microscopy | 3.31 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | P | S | EAHLVESGGGLTQPGGSLRLSCVVSGISFSGHYMHWVRLSSGRGLEWVSGISDIGDKRWYADSVRGRFTISRENAKNTLYLQMDNLRPEDSAVYYCTGRAILYPRAYYKDHRSDVWGAGVLVTVSS | EIVMTQSPATLSVSPGERATLSCRASQSVASDLVWYQQKPGQPPRVLIYEASKRAAGCPDRFSGSGSGTDFTLNINSLEPEDVGVYYCQQEIDWPLTFGGGTTVEIK | AHLVESGGGLTQPGGSLRLSCVVSGISFSGHYMHWVRLSSGRGLEWVSGISDIGDKRWYADSVRGRFTISRENAKNTLYLQMDNLRPEDSAVYYCTGRAILYPRAYYKDHRSDVWGAGVLVTVSS | EIVMTQSPATLSVSPGERATLSCRASQSVASDLVWYQQKPGQPPRVLIYEASKRAAGCPDRFSGSGSGTDFTLNINSLEPEDVGVYYCQQEIDWPLTFGGGTTVEIK | 15.194695 | 13.367791 | 126 | 107 | 125 | 107 | 125 | 107 | 38 | antibody gpz6-a.01 heavy chain | antibody gpz6-a.01 light chain | macaca | macaca | B | protein | envelope glycoprotein gp41 | human immunodeficiency virus 1 | 36 | 18 | 0.9 | HL | train |
8tjs_Q_T | 8tjs | cryo-em structure of hiv-1 bg505ds-sosip.664 env trimer bound to gpz6-a.01 fab | yes | viral protein/immune system | 2023-07-24 | 2024-07-31 | electron microscopy | 3.31 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | Q | T | EAHLVESGGGLTQPGGSLRLSCVVSGISFSGHYMHWVRLSSGRGLEWVSGISDIGDKRWYADSVRGRFTISRENAKNTLYLQMDNLRPEDSAVYYCTGRAILYPRAYYKDHRSDVWGAGVLVTVSS | EIVMTQSPATLSVSPGERATLSCRASQSVASDLVWYQQKPGQPPRVLIYEASKRAAGCPDRFSGSGSGTDFTLNINSLEPEDVGVYYCQQEIDWPLTFGGGTTVEIK | AHLVESGGGLTQPGGSLRLSCVVSGISFSGHYMHWVRLSSGRGLEWVSGISDIGDKRWYADSVRGRFTISRENAKNTLYLQMDNLRPEDSAVYYCTGRAILYPRAYYKDHRSDVWGAGVLVTVSS | EIVMTQSPATLSVSPGERATLSCRASQSVASDLVWYQQKPGQPPRVLIYEASKRAAGCPDRFSGSGSGTDFTLNINSLEPEDVGVYYCQQEIDWPLTFGGGTTVEIK | 15.077742 | 13.362489 | 126 | 107 | 125 | 107 | 125 | 107 | 41 | antibody gpz6-a.01 heavy chain | antibody gpz6-a.01 light chain | macaca | macaca | B;I | protein;protein | envelope glycoprotein gp41;envelope glycoprotein gp41 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 16;39 | 7;21 | 1.0;0.91 | HL | train |
8tjs_R_U | 8tjs | cryo-em structure of hiv-1 bg505ds-sosip.664 env trimer bound to gpz6-a.01 fab | yes | viral protein/immune system | 2023-07-24 | 2024-07-31 | electron microscopy | 3.31 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | R | U | EAHLVESGGGLTQPGGSLRLSCVVSGISFSGHYMHWVRLSSGRGLEWVSGISDIGDKRWYADSVRGRFTISRENAKNTLYLQMDNLRPEDSAVYYCTGRAILYPRAYYKDHRSDVWGAGVLVTVSS | EIVMTQSPATLSVSPGERATLSCRASQSVASDLVWYQQKPGQPPRVLIYEASKRAAGCPDRFSGSGSGTDFTLNINSLEPEDVGVYYCQQEIDWPLTFGGGTTVEIK | AHLVESGGGLTQPGGSLRLSCVVSGISFSGHYMHWVRLSSGRGLEWVSGISDIGDKRWYADSVRGRFTISRENAKNTLYLQMDNLRPEDSAVYYCTGRAILYPRAYYKDHRSDVWGAGVLVTVSS | EIVMTQSPATLSVSPGERATLSCRASQSVASDLVWYQQKPGQPPRVLIYEASKRAAGCPDRFSGSGSGTDFTLNINSLEPEDVGVYYCQQEIDWPLTFGGGTTVEIK | 15.137543 | 13.382019 | 126 | 107 | 125 | 107 | 125 | 107 | 43 | antibody gpz6-a.01 heavy chain | antibody gpz6-a.01 light chain | macaca | macaca | H;I | protein;protein | envelope glycoprotein gp41;envelope glycoprotein gp41 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 40;17 | 21;7 | 0.91;1.0 | HL | train |
8k6m_S | 8k6m | structural complex of neuropeptide y receptor 1 | yes | membrane protein | 2023-07-25 | 2024-07-31 | electron microscopy | 3.3 | N.A. | N.A. | 38882210 | 10.1002/mco2.565 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAENLYFQGHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 18.015493 | 0 | 266 | 0 | 232 | 0 | 246 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-2;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 28;22 | 17;9 | 0.94;0.75 | H_only | train |
8k6n_S | 8k6n | structural complex of neuropeptide y receptor 2 | yes | membrane protein | 2023-07-25 | 2024-07-31 | electron microscopy | 3.2 | N.A. | N.A. | 38882210 | 10.1002/mco2.565 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAENLYFQGHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.594196 | 0 | 266 | 0 | 232 | 0 | 246 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-2;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 29;24 | 18;11 | 0.95;0.79 | H_only | train |
8k6o_S | 8k6o | structural complex of neuropeptide y receptor 1 | yes | membrane protein | 2023-07-25 | 2024-07-31 | electron microscopy | 3.3 | N.A. | N.A. | 38882210 | 10.1002/mco2.565 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAENLYFQGHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.811943 | 0 | 266 | 0 | 232 | 0 | 246 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-2;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 31;19 | 19;8 | 0.95;0.89 | H_only | train |
8tkc_G_H | 8tkc | cryo-em structure of hiv-1 bg505ds-sosip.664 env trimer bound to dj85-b.01 fab | yes | viral protein/immune system | 2023-07-25 | 2024-08-28 | electron microscopy | 3.1 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | G | H | QVQLQESGPGLVKASETLSLTCAVSGASVSGNYYWNWIRQSPGKELEWIGNIHGNSGTTTYNPSLESRVTISTDTSKNQFSLKLTSVTGADTATYFCATQFKKYWGLSVSSPFSFSDSWGQGVLVSVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQ | DIQMTQSPRSLSASVGDRVTITCRASQDISPDLNWYQQKPGGPLKLLIYDASNLQGGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQYNGYPWTFGQGTKVDHKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKASETLSLTCAVSGASVSGNYYWNWIRQSPGKELEWIGNIHGNSGTTTYNPSLESRVTISTDTSKNQFSLKLTSVTGADTATYFCATQFKKYWGLSVSSPFSFSDSWGQGVLVSVSS | DIQMTQSPRSLSASVGDRVTITCRASQDISPDLNWYQQKPGGPLKLLIYDASNLQGGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQYNGYPWTFGQGTKVDHK | 15.456365 | 13.173816 | 240 | 214 | 129 | 107 | 129 | 107 | 38 | dj85-b.01 fab heavy chain | dj85-b.01 fab light chain | homo sapiens | homo sapiens | B | protein | bg505 ds-sosip transmembrane protein gp41 | human immunodeficiency virus 1 | 35 | 19 | 0.95 | HL | train |
8tkc_I_J | 8tkc | cryo-em structure of hiv-1 bg505ds-sosip.664 env trimer bound to dj85-b.01 fab | yes | viral protein/immune system | 2023-07-25 | 2024-08-28 | electron microscopy | 3.1 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | I | J | QVQLQESGPGLVKASETLSLTCAVSGASVSGNYYWNWIRQSPGKELEWIGNIHGNSGTTTYNPSLESRVTISTDTSKNQFSLKLTSVTGADTATYFCATQFKKYWGLSVSSPFSFSDSWGQGVLVSVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQ | DIQMTQSPRSLSASVGDRVTITCRASQDISPDLNWYQQKPGGPLKLLIYDASNLQGGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQYNGYPWTFGQGTKVDHKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKASETLSLTCAVSGASVSGNYYWNWIRQSPGKELEWIGNIHGNSGTTTYNPSLESRVTISTDTSKNQFSLKLTSVTGADTATYFCATQFKKYWGLSVSSPFSFSDSWGQGVLVSVSS | DIQMTQSPRSLSASVGDRVTITCRASQDISPDLNWYQQKPGGPLKLLIYDASNLQGGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQYNGYPWTFGQGTKVDHK | 15.47055 | 13.169274 | 240 | 214 | 129 | 107 | 129 | 107 | 39 | dj85-b.01 fab heavy chain | dj85-b.01 fab light chain | homo sapiens | homo sapiens | C;D | protein;protein | bg505 ds-sosip surface protein gp120;bg505 ds-sosip transmembrane protein gp41 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 11;30 | 5;17 | 0.83;0.94 | HL | train |
8tkc_K_L | 8tkc | cryo-em structure of hiv-1 bg505ds-sosip.664 env trimer bound to dj85-b.01 fab | yes | viral protein/immune system | 2023-07-25 | 2024-08-28 | electron microscopy | 3.1 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | K | L | QVQLQESGPGLVKASETLSLTCAVSGASVSGNYYWNWIRQSPGKELEWIGNIHGNSGTTTYNPSLESRVTISTDTSKNQFSLKLTSVTGADTATYFCATQFKKYWGLSVSSPFSFSDSWGQGVLVSVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQ | DIQMTQSPRSLSASVGDRVTITCRASQDISPDLNWYQQKPGGPLKLLIYDASNLQGGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQYNGYPWTFGQGTKVDHKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKASETLSLTCAVSGASVSGNYYWNWIRQSPGKELEWIGNIHGNSGTTTYNPSLESRVTISTDTSKNQFSLKLTSVTGADTATYFCATQFKKYWGLSVSSPFSFSDSWGQGVLVSVSS | DIQMTQSPRSLSASVGDRVTITCRASQDISPDLNWYQQKPGGPLKLLIYDASNLQGGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQYNGYPWTFGQGTKVDHK | 15.468174 | 13.168729 | 240 | 214 | 129 | 107 | 129 | 107 | 37 | dj85-b.01 fab heavy chain | dj85-b.01 fab light chain | homo sapiens | homo sapiens | F | protein | bg505 ds-sosip transmembrane protein gp41 | human immunodeficiency virus 1 | 30 | 17 | 0.94 | HL | train |
8py4_D_C | 8py4 | abcg2 in complex with ko143 and 5d3 fab | no | transport protein | 2023-07-25 | 2024-11-06 | electron microscopy | 3 | N.A. | N.A. | 39445888 | 10.1021/acschembio.4c00353 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | D | C | QVQLQESGPGLVKPSQSLSLTCTVTGFSITSDYAWNWIRQFPGKKLEWMGYINFDGGTTYNPSLRGRISITRDTSKNQFFLQLRSVTPEDTATYYCATFYGAKGTLDYWGQGTSVTVSSAKTTPPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGP | DIVLTQSPSSFSVSLGDRVTISCKASGYILNRLAWYQQKPGNAPRLLISGATSLETGFPSRFSGTGSGKDYTLSISSLQTEDVGTYYCQQYWSTPWTFGGGTKLEIRRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | VQLQESGPGLVKPSQSLSLTCTVTGFSITSDYAWNWIRQFPGKKLEWMGYINFDGGTTYNPSLRGRISITRDTSKNQFFLQLRSVTPEDTATYYCATFYGAKGTLDYWGQGTSVTVSS | DIVLTQSPSSFSVSLGDRVTISCKASGYILNRLAWYQQKPGNAPRLLISGATSLETGFPSRFSGTGSGKDYTLSISSLQTEDVGTYYCQQYWSTPWTFGGGTKLEIR | 13.757342 | 13.310096 | 221 | 214 | 118 | 107 | 118 | 107 | 40 | 5d3(fab) heavy chain variable domain | 5d3(fab) light chain variable domain | mus musculus | mus musculus | A;B | protein;protein | broad substrate specificity atp-binding cassette transporter abcg2;broad substrate specificity atp-binding cassette transporter abcg2 | homo sapiens;homo sapiens | 21;27 | 13;12 | 1.0;1.0 | HL | train |
8py4_F_E | 8py4 | abcg2 in complex with ko143 and 5d3 fab | no | transport protein | 2023-07-25 | 2024-11-06 | electron microscopy | 3 | N.A. | N.A. | 39445888 | 10.1021/acschembio.4c00353 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | F | E | QVQLQESGPGLVKPSQSLSLTCTVTGFSITSDYAWNWIRQFPGKKLEWMGYINFDGGTTYNPSLRGRISITRDTSKNQFFLQLRSVTPEDTATYYCATFYGAKGTLDYWGQGTSVTVSSAKTTPPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGP | DIVLTQSPSSFSVSLGDRVTISCKASGYILNRLAWYQQKPGNAPRLLISGATSLETGFPSRFSGTGSGKDYTLSISSLQTEDVGTYYCQQYWSTPWTFGGGTKLEIRRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | VQLQESGPGLVKPSQSLSLTCTVTGFSITSDYAWNWIRQFPGKKLEWMGYINFDGGTTYNPSLRGRISITRDTSKNQFFLQLRSVTPEDTATYYCATFYGAKGTLDYWGQGTSVTVSS | DIVLTQSPSSFSVSLGDRVTISCKASGYILNRLAWYQQKPGNAPRLLISGATSLETGFPSRFSGTGSGKDYTLSISSLQTEDVGTYYCQQYWSTPWTFGGGTKLEIR | 13.757353 | 13.307832 | 221 | 214 | 118 | 107 | 118 | 107 | 40 | 5d3(fab) heavy chain variable domain | 5d3(fab) light chain variable domain | mus musculus | mus musculus | A;B | protein;protein | broad substrate specificity atp-binding cassette transporter abcg2;broad substrate specificity atp-binding cassette transporter abcg2 | homo sapiens;homo sapiens | 28;21 | 13;13 | 1.0;1.0 | HL | train |
8tl2_G_H | 8tl2 | cryo-em structure of hiv-1 bg505ds-sosip.664 env trimer bound to dj85-c.01 fab | yes | viral protein/immune system | 2023-07-26 | 2024-08-28 | electron microscopy | 3.2 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | G | H | QVQLQESGPGLVKPSETLSLTCAVSGVSISGNYYWNWIRQSPGKGLEWIGNIHGNTAATVYNPSLGSRVTFSRDTSKNQFSLRLDSVTAADTAVYFCATLYEFRVYMGERISYHDYWGQGLLVTVSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQ | DIQMTQSPSSLSASVGDRVTISCRASQDISSDLNWYQQKPGKPPQLLIYFASNLQSGVPSRFSGSGAGTEFTLTINSLQAEDFASYFCLQYQSYPWTFGQGTMVDLKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSETLSLTCAVSGVSISGNYYWNWIRQSPGKGLEWIGNIHGNTAATVYNPSLGSRVTFSRDTSKNQFSLRLDSVTAADTAVYFCATLYEFRVYMGERISYHDYWGQGLLVTVSA | DIQMTQSPSSLSASVGDRVTISCRASQDISSDLNWYQQKPGKPPQLLIYFASNLQSGVPSRFSGSGAGTEFTLTINSLQAEDFASYFCLQYQSYPWTFGQGTMVDLKRTV | 15.371005 | 13.865742 | 237 | 214 | 127 | 110 | 127 | 110 | 33 | dj85-c.01 fab heavy chain | dj85-c.01 fab light chain | homo sapiens | homo sapiens | B;F | protein;protein | bg505 ds-sosip transmembrane protein gp41;bg505 ds-sosip transmembrane protein gp41 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 31;13 | 17;5 | 0.85;0.83 | HL | train |
8tl2_K_L | 8tl2 | cryo-em structure of hiv-1 bg505ds-sosip.664 env trimer bound to dj85-c.01 fab | yes | viral protein/immune system | 2023-07-26 | 2024-08-28 | electron microscopy | 3.2 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | K | L | QVQLQESGPGLVKPSETLSLTCAVSGVSISGNYYWNWIRQSPGKGLEWIGNIHGNTAATVYNPSLGSRVTFSRDTSKNQFSLRLDSVTAADTAVYFCATLYEFRVYMGERISYHDYWGQGLLVTVSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQ | DIQMTQSPSSLSASVGDRVTISCRASQDISSDLNWYQQKPGKPPQLLIYFASNLQSGVPSRFSGSGAGTEFTLTINSLQAEDFASYFCLQYQSYPWTFGQGTMVDLKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSETLSLTCAVSGVSISGNYYWNWIRQSPGKGLEWIGNIHGNTAATVYNPSLGSRVTFSRDTSKNQFSLRLDSVTAADTAVYFCATLYEFRVYMGERISYHDYWGQGLLVTVSA | DIQMTQSPSSLSASVGDRVTISCRASQDISSDLNWYQQKPGKPPQLLIYFASNLQSGVPSRFSGSGAGTEFTLTINSLQAEDFASYFCLQYQSYPWTFGQGTMVDLKRTV | 15.370156 | 13.786576 | 237 | 214 | 127 | 110 | 127 | 110 | 32 | dj85-c.01 fab heavy chain | dj85-c.01 fab light chain | homo sapiens | homo sapiens | F | protein | bg505 ds-sosip transmembrane protein gp41 | human immunodeficiency virus 1 | 31 | 17 | 0.85 | HL | train |
8tl3_G_H | 8tl3 | cryo-em structure of hiv-1 bg505ds-sosip.664 env trimer bound to dj85-d.01 fab | yes | viral protein/immune system | 2023-07-26 | 2024-08-28 | electron microscopy | 3.1 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | G | H | QVQLHESGPGLVKPSETLSLTCAVSGASISGNYYWNWIRQSPGRGLEWIGNIHGNGATTQYNPSLKSRVTISQDTSKNQVFLNLNSMTAADTAIYYCATQFRTYVGSHLFSYSDFWGQGVLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQ | DIQMTQSPSSLSASVGDRVTMTCRASQDITTDLNWYQQKPGQPPKLLIYVASSLQNGVPSRFSGSGSGTEFTLTIRSLQPEDFATYYCLQYDSYPWTFGQGTTVDFRRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLHESGPGLVKPSETLSLTCAVSGASISGNYYWNWIRQSPGRGLEWIGNIHGNGATTQYNPSLKSRVTISQDTSKNQVFLNLNSMTAADTAIYYCATQFRTYVGSHLFSYSDFWGQGVLVTVSS | DIQMTQSPSSLSASVGDRVTMTCRASQDITTDLNWYQQKPGQPPKLLIYVASSLQNGVPSRFSGSGSGTEFTLTIRSLQPEDFATYYCLQYDSYPWTFGQGTTVDFRRTV | 15.194485 | 13.879132 | 237 | 214 | 126 | 110 | 126 | 110 | 34 | dj85-d.01 fab heavy chain | dj85-d.01 fab light chain | homo sapiens | homo sapiens | B | protein | bg505 ds-sosip glycoprotein gp41 | human immunodeficiency virus 1 | 36 | 16 | 0.8 | HL | train |
8tl3_I_J | 8tl3 | cryo-em structure of hiv-1 bg505ds-sosip.664 env trimer bound to dj85-d.01 fab | yes | viral protein/immune system | 2023-07-26 | 2024-08-28 | electron microscopy | 3.1 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | I | J | QVQLHESGPGLVKPSETLSLTCAVSGASISGNYYWNWIRQSPGRGLEWIGNIHGNGATTQYNPSLKSRVTISQDTSKNQVFLNLNSMTAADTAIYYCATQFRTYVGSHLFSYSDFWGQGVLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQ | DIQMTQSPSSLSASVGDRVTMTCRASQDITTDLNWYQQKPGQPPKLLIYVASSLQNGVPSRFSGSGSGTEFTLTIRSLQPEDFATYYCLQYDSYPWTFGQGTTVDFRRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLHESGPGLVKPSETLSLTCAVSGASISGNYYWNWIRQSPGRGLEWIGNIHGNGATTQYNPSLKSRVTISQDTSKNQVFLNLNSMTAADTAIYYCATQFRTYVGSHLFSYSDFWGQGVLVTVSS | DIQMTQSPSSLSASVGDRVTMTCRASQDITTDLNWYQQKPGQPPKLLIYVASSLQNGVPSRFSGSGSGTEFTLTIRSLQPEDFATYYCLQYDSYPWTFGQGTTVDFRRTV | 15.191288 | 13.849055 | 237 | 214 | 126 | 110 | 126 | 110 | 37 | dj85-d.01 fab heavy chain | dj85-d.01 fab light chain | homo sapiens | homo sapiens | D | protein | bg505 ds-sosip glycoprotein gp41 | human immunodeficiency virus 1 | 35 | 16 | 0.84 | HL | train |
8tl3_K_L | 8tl3 | cryo-em structure of hiv-1 bg505ds-sosip.664 env trimer bound to dj85-d.01 fab | yes | viral protein/immune system | 2023-07-26 | 2024-08-28 | electron microscopy | 3.1 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | K | L | QVQLHESGPGLVKPSETLSLTCAVSGASISGNYYWNWIRQSPGRGLEWIGNIHGNGATTQYNPSLKSRVTISQDTSKNQVFLNLNSMTAADTAIYYCATQFRTYVGSHLFSYSDFWGQGVLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQ | DIQMTQSPSSLSASVGDRVTMTCRASQDITTDLNWYQQKPGQPPKLLIYVASSLQNGVPSRFSGSGSGTEFTLTIRSLQPEDFATYYCLQYDSYPWTFGQGTTVDFRRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLHESGPGLVKPSETLSLTCAVSGASISGNYYWNWIRQSPGRGLEWIGNIHGNGATTQYNPSLKSRVTISQDTSKNQVFLNLNSMTAADTAIYYCATQFRTYVGSHLFSYSDFWGQGVLVTVSS | DIQMTQSPSSLSASVGDRVTMTCRASQDITTDLNWYQQKPGQPPKLLIYVASSLQNGVPSRFSGSGSGTEFTLTIRSLQPEDFATYYCLQYDSYPWTFGQGTTVDFRRTV | 15.170942 | 13.871207 | 237 | 214 | 126 | 110 | 126 | 110 | 37 | dj85-d.01 fab heavy chain | dj85-d.01 fab light chain | homo sapiens | homo sapiens | F | protein | bg505 ds-sosip glycoprotein gp41 | human immunodeficiency virus 1 | 33 | 14 | 0.82 | HL | train |
8tl4_G_H | 8tl4 | cryo-em structure of hiv-1 bg505ds-sosip.664 env trimer bound to dj85-e.01 fab | yes | viral protein/immune system | 2023-07-26 | 2024-08-28 | electron microscopy | 3.2 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | G | H | QVWLRESGPGLVKSSETLSLTCAVSGASVGGNYYWNWIRQFPGKGLEWMGNVHGGSGNTEYNPSLKGRLTISRDTSRGHFLLHLDSVTAADTAVYYCSTQYWRHTGYDSSFFDSWGQGALVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQ | DVQMTQSPSSLSASVGDRVSITCRASEDITTDLEWYQQKPGKAPNLLIYDVSSLQSGVPSRFSGSRSGTEFTLTINSLQPEDFATYFCLQYNSYPWTFGQGTKVDIKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | QVWLRESGPGLVKSSETLSLTCAVSGASVGGNYYWNWIRQFPGKGLEWMGNVHGGSGNTEYNPSLKGRLTISRDTSRGHFLLHLDSVTAADTAVYYCSTQYWRHTGYDSSFFDSWGQGALVTVSS | DVQMTQSPSSLSASVGDRVSITCRASEDITTDLEWYQQKPGKAPNLLIYDVSSLQSGVPSRFSGSRSGTEFTLTINSLQPEDFATYFCLQYNSYPWTFGQGTKVDIKRTV | 15.041126 | 13.844947 | 236 | 214 | 125 | 110 | 125 | 110 | 37 | dj85-e.01 fab heavy chain | dj85-e.01 fab light chain | homo sapiens | homo sapiens | B | protein | bg505 ds-sosip transmembrane protein gp41 | human immunodeficiency virus 1 | 33 | 17 | 0.85 | HL | train |
8tl4_I_J | 8tl4 | cryo-em structure of hiv-1 bg505ds-sosip.664 env trimer bound to dj85-e.01 fab | yes | viral protein/immune system | 2023-07-26 | 2024-08-28 | electron microscopy | 3.2 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | I | J | QVWLRESGPGLVKSSETLSLTCAVSGASVGGNYYWNWIRQFPGKGLEWMGNVHGGSGNTEYNPSLKGRLTISRDTSRGHFLLHLDSVTAADTAVYYCSTQYWRHTGYDSSFFDSWGQGALVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQ | DVQMTQSPSSLSASVGDRVSITCRASEDITTDLEWYQQKPGKAPNLLIYDVSSLQSGVPSRFSGSRSGTEFTLTINSLQPEDFATYFCLQYNSYPWTFGQGTKVDIKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | QVWLRESGPGLVKSSETLSLTCAVSGASVGGNYYWNWIRQFPGKGLEWMGNVHGGSGNTEYNPSLKGRLTISRDTSRGHFLLHLDSVTAADTAVYYCSTQYWRHTGYDSSFFDSWGQGALVTVSS | DVQMTQSPSSLSASVGDRVSITCRASEDITTDLEWYQQKPGKAPNLLIYDVSSLQSGVPSRFSGSRSGTEFTLTINSLQPEDFATYFCLQYNSYPWTFGQGTKVDIKRTV | 15.040714 | 13.859004 | 236 | 214 | 125 | 110 | 125 | 110 | 39 | dj85-e.01 fab heavy chain | dj85-e.01 fab light chain | homo sapiens | homo sapiens | D | protein | bg505 ds-sosip transmembrane protein gp41 | human immunodeficiency virus 1 | 33 | 18 | 0.9 | HL | train |
8tl4_K_L | 8tl4 | cryo-em structure of hiv-1 bg505ds-sosip.664 env trimer bound to dj85-e.01 fab | yes | viral protein/immune system | 2023-07-26 | 2024-08-28 | electron microscopy | 3.2 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | K | L | QVWLRESGPGLVKSSETLSLTCAVSGASVGGNYYWNWIRQFPGKGLEWMGNVHGGSGNTEYNPSLKGRLTISRDTSRGHFLLHLDSVTAADTAVYYCSTQYWRHTGYDSSFFDSWGQGALVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQ | DVQMTQSPSSLSASVGDRVSITCRASEDITTDLEWYQQKPGKAPNLLIYDVSSLQSGVPSRFSGSRSGTEFTLTINSLQPEDFATYFCLQYNSYPWTFGQGTKVDIKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | QVWLRESGPGLVKSSETLSLTCAVSGASVGGNYYWNWIRQFPGKGLEWMGNVHGGSGNTEYNPSLKGRLTISRDTSRGHFLLHLDSVTAADTAVYYCSTQYWRHTGYDSSFFDSWGQGALVTVSS | DVQMTQSPSSLSASVGDRVSITCRASEDITTDLEWYQQKPGKAPNLLIYDVSSLQSGVPSRFSGSRSGTEFTLTINSLQPEDFATYFCLQYNSYPWTFGQGTKVDIKRTV | 15.043684 | 13.856903 | 236 | 214 | 125 | 110 | 125 | 110 | 36 | dj85-e.01 fab heavy chain | dj85-e.01 fab light chain | homo sapiens | homo sapiens | F | protein | bg505 ds-sosip transmembrane protein gp41 | human immunodeficiency virus 1 | 35 | 18 | 0.86 | HL | train |
8tl5_G_H | 8tl5 | cryo-em structure of hiv-1 bg505ds-sosip.664 env trimer bound to herh-c.01 fab | yes | viral protein/immune system | 2023-07-26 | 2024-08-28 | electron microscopy | 3.3 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | G | H | EVHLAESGGGLVQPGGSLRLSCAASGFMFSASEMHWVRQTPGKGLESVSVIGGSGTSTQYVDSVKGRFTVSRDNAKNALSLQMDSLRAEDTGVYYCARGGEVRSRGGWKNRVLDSWGQGVQVIVSPASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQ | DIQMTQSPSSLSASVGDRVTITCQTSQPVNLWVAWYQQKPGKAPNLLIFGASTLQSGVPSRFSGSGAGTEFILTISNLQPEDFGTYFCQQHHNFPWTFGQGTKVDVKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | EVHLAESGGGLVQPGGSLRLSCAASGFMFSASEMHWVRQTPGKGLESVSVIGGSGTSTQYVDSVKGRFTVSRDNAKNALSLQMDSLRAEDTGVYYCARGGEVRSRGGWKNRVLDSWGQGVQVIVSP | DIQMTQSPSSLSASVGDRVTITCQTSQPVNLWVAWYQQKPGKAPNLLIFGASTLQSGVPSRFSGSGAGTEFILTISNLQPEDFGTYFCQQHHNFPWTFGQGTKVDVK | 14.931215 | 13.290403 | 237 | 214 | 126 | 107 | 126 | 107 | 50 | herh-c.01 fab heavy chain | herh-c.01 fab light chain | homo sapiens | homo sapiens | B | protein | bg505 ds-sosip transmembrane protein gp41 | human immunodeficiency virus 1 | 14 | 6 | 1 | HL | train |
8tl5_I_J | 8tl5 | cryo-em structure of hiv-1 bg505ds-sosip.664 env trimer bound to herh-c.01 fab | yes | viral protein/immune system | 2023-07-26 | 2024-08-28 | electron microscopy | 3.3 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | I | J | EVHLAESGGGLVQPGGSLRLSCAASGFMFSASEMHWVRQTPGKGLESVSVIGGSGTSTQYVDSVKGRFTVSRDNAKNALSLQMDSLRAEDTGVYYCARGGEVRSRGGWKNRVLDSWGQGVQVIVSPASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQ | DIQMTQSPSSLSASVGDRVTITCQTSQPVNLWVAWYQQKPGKAPNLLIFGASTLQSGVPSRFSGSGAGTEFILTISNLQPEDFGTYFCQQHHNFPWTFGQGTKVDVKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | EVHLAESGGGLVQPGGSLRLSCAASGFMFSASEMHWVRQTPGKGLESVSVIGGSGTSTQYVDSVKGRFTVSRDNAKNALSLQMDSLRAEDTGVYYCARGGEVRSRGGWKNRVLDSWGQGVQVIVSP | DIQMTQSPSSLSASVGDRVTITCQTSQPVNLWVAWYQQKPGKAPNLLIFGASTLQSGVPSRFSGSGAGTEFILTISNLQPEDFGTYFCQQHHNFPWTFGQGTKVDVK | 14.936635 | 13.297033 | 237 | 214 | 126 | 107 | 126 | 107 | 50 | herh-c.01 fab heavy chain | herh-c.01 fab light chain | homo sapiens | homo sapiens | D | protein | bg505 ds-sosip transmembrane protein gp41 | human immunodeficiency virus 1 | 14 | 6 | 1 | HL | train |
8tl5_K_L | 8tl5 | cryo-em structure of hiv-1 bg505ds-sosip.664 env trimer bound to herh-c.01 fab | yes | viral protein/immune system | 2023-07-26 | 2024-08-28 | electron microscopy | 3.3 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | K | L | EVHLAESGGGLVQPGGSLRLSCAASGFMFSASEMHWVRQTPGKGLESVSVIGGSGTSTQYVDSVKGRFTVSRDNAKNALSLQMDSLRAEDTGVYYCARGGEVRSRGGWKNRVLDSWGQGVQVIVSPASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQ | DIQMTQSPSSLSASVGDRVTITCQTSQPVNLWVAWYQQKPGKAPNLLIFGASTLQSGVPSRFSGSGAGTEFILTISNLQPEDFGTYFCQQHHNFPWTFGQGTKVDVKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | EVHLAESGGGLVQPGGSLRLSCAASGFMFSASEMHWVRQTPGKGLESVSVIGGSGTSTQYVDSVKGRFTVSRDNAKNALSLQMDSLRAEDTGVYYCARGGEVRSRGGWKNRVLDSWGQGVQVIVSP | DIQMTQSPSSLSASVGDRVTITCQTSQPVNLWVAWYQQKPGKAPNLLIFGASTLQSGVPSRFSGSGAGTEFILTISNLQPEDFGTYFCQQHHNFPWTFGQGTKVDVK | 14.941906 | 13.296467 | 237 | 214 | 126 | 107 | 126 | 107 | 50 | herh-c.01 fab heavy chain | herh-c.01 fab light chain | homo sapiens | homo sapiens | F | protein | bg505 ds-sosip transmembrane protein gp41 | human immunodeficiency virus 1 | 14 | 6 | 1 | HL | train |
8tlm_A_B | 8tlm | structure of a class a gpcr/fab complex | no | structural protein | 2023-07-27 | 2023-12-20 | electron microscopy | 2.9 | N.A. | N.A. | 38040762 | 10.1038/s41467-023-43601-8 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | A | B | QSVEESGGRLVTPGTPLTLTCTVSGFSLSNYAMIWVRQAPGEGLEWVGTISLGGYTYYANWAKGRFTISKTSTTVDLKISSPTTEDTATYFCARARWSTDSAIYTYAFDPWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | AYDMTQTPASVEVAVGGTVTIKCQASQSISSYLSWYQQKPGQRPELLIYKASTLASGVSSRFKGSGSGTQFTLTISDLEAADAATYYCQQGYTSSNIDNIFGGGTEVVVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QSVEESGGRLVTPGTPLTLTCTVSGFSLSNYAMIWVRQAPGEGLEWVGTISLGGYTYYANWAKGRFTISKTSTTVDLKISSPTTEDTATYFCARARWSTDSAIYTYAFDPWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | AYDMTQTPASVEVAVGGTVTIKCQASQSISSYLSWYQQKPGQRPELLIYKASTLASGVSSRFKGSGSGTQFTLTISDLEAADAATYYCQQGYTSSNIDNIFGGGTEVVVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 21.478926 | 23.572706 | 225 | 217 | 215 | 215 | 221 | 215 | 107 | fab heavy chain | fab light chain | oryctolagus cuniculus | oryctolagus cuniculus | C | protein | c-c chemokine receptor type 8, green fluorescent protein fusion | homo sapiens | 33 | 15 | 0.83 | HL | train |
8tma_H_L | 8tma | antibody n3-1 bound to rbd in the up conformation | yes | viral protein/immune system | 2023-07-29 | 2024-01-17 | electron microscopy | 3.2 | N.A. | N.A. | 38082099 | 10.1038/s42003-023-05649-6 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | H | L | QVQLQQWGPGLVNPSETLSLTCSVSGGSFATENYYWSWIRQHPGEGLEWIGNIYFSGNTYYNPSLNNRFTISFDTSKNHLSLKLPSVTAADTAVYYCARGTIYFDRSGYRRVDPFHIWGQGTMVIVSS | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYDASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSPWTFGQGTKVEIK | VQLQQWGPGLVNPSETLSLTCSVSGGSFATENYYWSWIRQHPGEGLEWIGNIYFSGNTYYNPSLNNRFTISFDTSKNHLSLKLPSVTAADTAVYYCARGTIYFDRSGYRRVDPFHIWGQGTMVIVSS | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYDASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSPWTFGQGTKVEIK | 15.53025 | 13.677205 | 128 | 108 | 127 | 108 | 127 | 108 | 38 | n3-1 fab heavy chain | n3-1 fab light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 43 | 19 | 0.95 | HL | train |
8tmb_H_L | 8tmb | cryo-em structure of cora in complex with conformation-specific synthetic antibody c12 and 20 mm mgcl2, state mg20-1 | no | membrane protein | 2023-07-29 | 2025-02-12 | electron microscopy | 3.6 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNIYYSSIHWVRQAPGKGLEWVASIYSYSGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSFYVFKRGTKYPYYNYPAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYYKPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVESGGGLVQPGGSLRLSCAASGFNIYYSSIHWVRQAPGKGLEWVASIYSYSGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSFYVFKRGTKYPYYNYPAMDYWGQGTLVTV | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYYKPITFGQGTKVEIK | 15.832852 | 13.352019 | 241 | 215 | 127 | 108 | 127 | 108 | 49 | sab c12 heavy chain | sab c12 light chain | homo sapiens | homo sapiens | A;E | protein;protein | cobalt/magnesium transport protein cora;cobalt/magnesium transport protein cora | thermotoga maritima;thermotoga maritima | 67;26 | 24;10 | 0.8;0.91 | HL | train |
8tmd_H_L | 8tmd | cryo-em structure of cora in complex with conformation-specific synthetic antibody c18 and 100 um mgcl2, state mg0.1-1a | no | membrane protein | 2023-07-29 | 2025-02-12 | electron microscopy | 3 | N.A. | N.A. | 41701836 | 10.1073/pnas.2512532123 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | ISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSS | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIK | 15.057766 | 13.087793 | 237 | 215 | 128 | 107 | 128 | 107 | 57 | sab c18 heavy chain | sab c18 light chain | homo sapiens | homo sapiens | A;B | protein;protein | cobalt/magnesium transport protein cora;cobalt/magnesium transport protein cora | thermotoga maritima;thermotoga maritima | 30;44 | 10;15 | 0.71;0.83 | HL | train |
8tme_H_L | 8tme | cryo-em structure of cora in complex with conformation-specific synthetic antibody c18 and 100 um mgcl2, state mg0.1-1b | no | membrane protein | 2023-07-29 | 2025-02-12 | electron microscopy | 3.1 | N.A. | N.A. | 41701836 | 10.1073/pnas.2512532123 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSS | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIK | 14.909989 | 13.048701 | 237 | 215 | 126 | 107 | 126 | 107 | 55 | sab c18 heavy chain | sab c18 light chain | homo sapiens | homo sapiens | A;B | protein;protein | cobalt/magnesium transport protein cora;cobalt/magnesium transport protein cora | thermotoga maritima;thermotoga maritima | 32;41 | 11;14 | 0.73;0.78 | HL | train |
8tmf_H_L | 8tmf | cryo-em structure of cora in complex with conformation-specific synthetic antibody c18 and 100 um mgcl2, state mg0.1-1c | no | membrane protein | 2023-07-29 | 2025-02-12 | electron microscopy | 3.4 | N.A. | N.A. | 41701836 | 10.1073/pnas.2512532123 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | ISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSS | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIK | 15.080139 | 13.144717 | 237 | 215 | 128 | 107 | 128 | 107 | 55 | sab c18 heavy chain | sab c18 light chain | homo sapiens | homo sapiens | A;B | protein;protein | cobalt/magnesium transport protein cora;cobalt/magnesium transport protein cora | thermotoga maritima;thermotoga maritima | 29;41 | 9;14 | 0.69;0.78 | HL | train |
8tmg_F_G | 8tmg | cryo-em structure of cora in complex with conformation-specific synthetic antibody c18 and 100 um mgcl2, state mg0.1-2a | no | membrane protein | 2023-07-29 | 2025-02-12 | electron microscopy | 3 | N.A. | N.A. | 41701836 | 10.1073/pnas.2512532123 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | F | G | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVT | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEI | 14.667657 | 12.983274 | 237 | 215 | 123 | 106 | 123 | 106 | 57 | sab c18 heavy chain | sab c18 light chain | homo sapiens | homo sapiens | A;B | protein;protein | cobalt/magnesium transport protein cora;cobalt/magnesium transport protein cora | thermotoga maritima;thermotoga maritima | 32;33 | 10;14 | 0.67;0.93 | HL | train |
8tmg_H_L | 8tmg | cryo-em structure of cora in complex with conformation-specific synthetic antibody c18 and 100 um mgcl2, state mg0.1-2a | no | membrane protein | 2023-07-29 | 2025-02-12 | electron microscopy | 3 | N.A. | N.A. | 41701836 | 10.1073/pnas.2512532123 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLV | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIK | 14.676481 | 13.107595 | 237 | 215 | 122 | 107 | 122 | 107 | 56 | sab c18 heavy chain | sab c18 light chain | homo sapiens | homo sapiens | C;D | protein;protein | cobalt/magnesium transport protein cora;cobalt/magnesium transport protein cora | thermotoga maritima;thermotoga maritima | 30;38 | 10;14 | 0.71;0.88 | HL | train |
8tmh_F_G | 8tmh | cryo-em structure of cora in complex with conformation-specific synthetic antibody c18 and 100 um mgcl2, state mg0.1-2b | no | membrane protein | 2023-07-29 | 2025-02-12 | electron microscopy | 3.1 | N.A. | N.A. | 41701836 | 10.1073/pnas.2512532123 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | F | G | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVT | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEI | 14.68147 | 12.981942 | 237 | 215 | 123 | 106 | 123 | 106 | 56 | sab c18 heavy chain | sab c18 light chain | homo sapiens | homo sapiens | A;B | protein;protein | cobalt/magnesium transport protein cora;cobalt/magnesium transport protein cora | thermotoga maritima;thermotoga maritima | 29;38 | 7;14 | 0.58;0.82 | HL | train |
8tmh_H_L | 8tmh | cryo-em structure of cora in complex with conformation-specific synthetic antibody c18 and 100 um mgcl2, state mg0.1-2b | no | membrane protein | 2023-07-29 | 2025-02-12 | electron microscopy | 3.1 | N.A. | N.A. | 41701836 | 10.1073/pnas.2512532123 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | ISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTV | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIK | 14.878858 | 13.210014 | 237 | 215 | 126 | 108 | 126 | 108 | 57 | sab c18 heavy chain | sab c18 light chain | homo sapiens | homo sapiens | C;D | protein;protein | cobalt/magnesium transport protein cora;cobalt/magnesium transport protein cora | thermotoga maritima;thermotoga maritima | 29;38 | 9;13 | 0.69;0.81 | HL | train |
8tmi_F_G | 8tmi | cryo-em structure of cora in complex with conformation-specific synthetic antibody c18 and 100 um mgcl2, state mg0.1-2c | no | membrane protein | 2023-07-29 | 2025-02-12 | electron microscopy | 3.3 | N.A. | N.A. | 41701836 | 10.1073/pnas.2512532123 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | F | G | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVT | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEI | 14.71009 | 12.967796 | 237 | 215 | 123 | 106 | 123 | 106 | 53 | sab c18 heavy chain | sab c18 light chain | homo sapiens | homo sapiens | A;B | protein;protein | cobalt/magnesium transport protein cora;cobalt/magnesium transport protein cora | thermotoga maritima;thermotoga maritima | 32;37 | 9;15 | 0.64;0.94 | HL | train |
8tmi_H_L | 8tmi | cryo-em structure of cora in complex with conformation-specific synthetic antibody c18 and 100 um mgcl2, state mg0.1-2c | no | membrane protein | 2023-07-29 | 2025-02-12 | electron microscopy | 3.3 | N.A. | N.A. | 41701836 | 10.1073/pnas.2512532123 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLV | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIK | 14.720448 | 13.125126 | 237 | 215 | 122 | 107 | 122 | 107 | 57 | sab c18 heavy chain | sab c18 light chain | homo sapiens | homo sapiens | C;D | protein;protein | cobalt/magnesium transport protein cora;cobalt/magnesium transport protein cora | thermotoga maritima;thermotoga maritima | 29;41 | 9;16 | 0.69;0.84 | HL | train |
8tmj_F_G | 8tmj | cryo-em structure of cora in complex with conformation-specific synthetic antibody c18 and 100 um mgcl2, state mg0.1-2d | no | membrane protein | 2023-07-29 | 2025-02-12 | electron microscopy | 3.2 | N.A. | N.A. | 41701836 | 10.1073/pnas.2512532123 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | F | G | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVT | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEI | 14.706004 | 13.025358 | 237 | 215 | 123 | 106 | 123 | 106 | 57 | sab c18 heavy chain | sab c18 light chain | homo sapiens | homo sapiens | A;B | protein;protein | cobalt/magnesium transport protein cora;cobalt/magnesium transport protein cora | thermotoga maritima;thermotoga maritima | 29;38 | 9;14 | 0.69;0.82 | HL | train |
8tmj_H_L | 8tmj | cryo-em structure of cora in complex with conformation-specific synthetic antibody c18 and 100 um mgcl2, state mg0.1-2d | no | membrane protein | 2023-07-29 | 2025-02-12 | electron microscopy | 3.2 | N.A. | N.A. | 41701836 | 10.1073/pnas.2512532123 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVT | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIK | 14.698558 | 13.139003 | 237 | 215 | 123 | 107 | 123 | 107 | 56 | sab c18 heavy chain | sab c18 light chain | homo sapiens | homo sapiens | C;D | protein;protein | cobalt/magnesium transport protein cora;cobalt/magnesium transport protein cora | thermotoga maritima;thermotoga maritima | 28;35 | 8;14 | 0.67;0.88 | HL | train |
8tmk_F_G | 8tmk | cryo-em structure of magnesium depleted cora in complex with conformation-specific synthetic antibody c18, state mgd-2c | no | membrane protein | 2023-07-29 | 2025-02-12 | electron microscopy | 3.4 | N.A. | N.A. | 41701836 | 10.1073/pnas.2512532123 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | F | G | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVT | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEI | 14.667035 | 13.034121 | 237 | 215 | 123 | 106 | 123 | 106 | 55 | sab c18 heavy chain | sab c18 light chain | homo sapiens | homo sapiens | A;B | protein;protein | cobalt/magnesium transport protein cora;cobalt/magnesium transport protein cora | thermotoga maritima;thermotoga maritima | 29;37 | 8;15 | 0.62;0.88 | HL | train |
8tmk_H_L | 8tmk | cryo-em structure of magnesium depleted cora in complex with conformation-specific synthetic antibody c18, state mgd-2c | no | membrane protein | 2023-07-29 | 2025-02-12 | electron microscopy | 3.4 | N.A. | N.A. | 41701836 | 10.1073/pnas.2512532123 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | ISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTV | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIK | 14.886484 | 13.18841 | 237 | 215 | 126 | 108 | 126 | 108 | 59 | sab c18 heavy chain | sab c18 light chain | homo sapiens | homo sapiens | C;D | protein;protein | cobalt/magnesium transport protein cora;cobalt/magnesium transport protein cora | thermotoga maritima;thermotoga maritima | 30;42 | 9;15 | 0.69;0.83 | HL | train |
8tml_F_G | 8tml | cryo-em structure of magnesium depleted cora in complex with conformation-specific synthetic antibody c18, state mgd-2b | no | membrane protein | 2023-07-29 | 2025-02-12 | electron microscopy | 3.4 | N.A. | N.A. | 41701836 | 10.1073/pnas.2512532123 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | F | G | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVT | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEI | 14.668648 | 12.956612 | 237 | 215 | 123 | 106 | 123 | 106 | 56 | sab c18 heavy chain | sab c18 light chain | homo sapiens | homo sapiens | A;B | protein;protein | cobalt/magnesium transport protein cora;cobalt/magnesium transport protein cora | thermotoga maritima;thermotoga maritima | 29;42 | 7;15 | 0.58;0.75 | HL | train |
8tml_H_L | 8tml | cryo-em structure of magnesium depleted cora in complex with conformation-specific synthetic antibody c18, state mgd-2b | no | membrane protein | 2023-07-29 | 2025-02-12 | electron microscopy | 3.4 | N.A. | N.A. | 41701836 | 10.1073/pnas.2512532123 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVT | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIK | 14.629687 | 13.09014 | 237 | 215 | 123 | 107 | 123 | 107 | 57 | sab c18 heavy chain | sab c18 light chain | homo sapiens | homo sapiens | C;D | protein;protein | cobalt/magnesium transport protein cora;cobalt/magnesium transport protein cora | thermotoga maritima;thermotoga maritima | 32;34 | 9;14 | 0.64;0.93 | HL | train |
8tmm_F_G | 8tmm | cryo-em structure of magnesium depleted cora in complex with conformation-specific synthetic antibody c18, state mgd-2a | no | membrane protein | 2023-07-29 | 2025-02-12 | electron microscopy | 3.4 | N.A. | N.A. | 41701836 | 10.1073/pnas.2512532123 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | F | G | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVT | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEI | 14.681952 | 12.945538 | 237 | 215 | 123 | 106 | 123 | 106 | 56 | sab c18 heavy chain | sab c18 light chain | homo sapiens | homo sapiens | A;B | protein;protein | cobalt/magnesium transport protein cora;cobalt/magnesium transport protein cora | thermotoga maritima;thermotoga maritima | 29;40 | 9;14 | 0.69;0.82 | HL | train |
8tmm_H_L | 8tmm | cryo-em structure of magnesium depleted cora in complex with conformation-specific synthetic antibody c18, state mgd-2a | no | membrane protein | 2023-07-29 | 2025-02-12 | electron microscopy | 3.4 | N.A. | N.A. | 41701836 | 10.1073/pnas.2512532123 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLV | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIK | 14.816316 | 13.209546 | 237 | 215 | 122 | 107 | 122 | 107 | 55 | sab c18 heavy chain | sab c18 light chain | homo sapiens | homo sapiens | C;D | protein;protein | cobalt/magnesium transport protein cora;cobalt/magnesium transport protein cora | thermotoga maritima;thermotoga maritima | 29;38 | 10;14 | 0.71;0.88 | HL | train |
8tmn_H_L | 8tmn | cryo-em structure of magnesium depleted cora in complex with conformation-specific synthetic antibody c18, state mgd-1d | no | membrane protein | 2023-07-29 | 2025-02-12 | electron microscopy | 3.3 | N.A. | N.A. | 41701836 | 10.1073/pnas.2512532123 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | ISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSS | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIK | 15.054942 | 13.068221 | 237 | 215 | 128 | 107 | 128 | 107 | 56 | sab c18 heavy chain | sab c18 light chain | homo sapiens | homo sapiens | A;B | protein;protein | cobalt/magnesium transport protein cora;cobalt/magnesium transport protein cora | thermotoga maritima;thermotoga maritima | 28;47 | 8;17 | 0.67;0.81 | HL | train |
8tmo_H_L | 8tmo | cryo-em structure of magnesium depleted cora in complex with conformation-specific synthetic antibody c18, state mgd-1c | no | membrane protein | 2023-07-29 | 2025-02-12 | electron microscopy | 3.1 | N.A. | N.A. | 41701836 | 10.1073/pnas.2512532123 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSS | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIK | 14.868644 | 13.065318 | 237 | 215 | 126 | 107 | 126 | 107 | 55 | sab c18 heavy chain | sab c18 light chain | homo sapiens | homo sapiens | A;B | protein;protein | cobalt/magnesium transport protein cora;cobalt/magnesium transport protein cora | thermotoga maritima;thermotoga maritima | 31;41 | 11;16 | 0.73;0.89 | HL | train |
8tmp_H_L | 8tmp | cryo-em structure of magnesium depleted cora in complex with conformation-specific synthetic antibody c18, state mgd-1b | no | membrane protein | 2023-07-29 | 2025-02-12 | electron microscopy | 3.2 | N.A. | N.A. | 41701836 | 10.1073/pnas.2512532123 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKD | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNS | EVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSS | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIK | 14.876182 | 13.049667 | 160 | 160 | 126 | 107 | 126 | 107 | 55 | sab c18 heavy chain | sab c18 light chain | homo sapiens | homo sapiens | A;B | protein;protein | cobalt/magnesium transport protein cora;cobalt/magnesium transport protein cora | thermotoga maritima;thermotoga maritima | 32;43 | 11;14 | 0.69;0.82 | HL | train |
8tmq_H_L | 8tmq | cryo-em structure of magnesium depleted cora in complex with conformation-specific synthetic antibody c18, state mgd-1a | no | membrane protein | 2023-07-29 | 2025-02-12 | electron microscopy | 3.1 | N.A. | N.A. | 41701836 | 10.1073/pnas.2512532123 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | ISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYYSIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSYWYYIWSYSYGNAMDYWGQGTLVTVSS | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIK | 15.061822 | 13.089291 | 237 | 215 | 128 | 107 | 128 | 107 | 55 | sab c18 heavy chain | sab c18 light chain | homo sapiens | homo sapiens | A;B | protein;protein | cobalt/magnesium transport protein cora;cobalt/magnesium transport protein cora | thermotoga maritima;thermotoga maritima | 29;44 | 9;14 | 0.64;0.78 | HL | train |
8k8j_N | 8k8j | cannabinoid receptor 1 bound to fenofibrate coupling minigsq and nb35 complex | no | membrane protein | 2023-07-30 | 2024-02-14 | electron microscopy | 2.88 | N.A. | N.A. | 38298116 | 10.1002/advs.202306311 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | 13.506626 | 0 | 139 | 0 | 126 | 0 | 126 | 0 | 0 | nanobody 35 | N.A. | homo sapiens | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 46;31 | 13;12 | 0.54;0.75 | H_only | train |
8tmy_A_B | 8tmy | crystal structure of sars-cov-2 spike stem helix peptide in complex with neutralizing antibody chm-16 | no | viral protein/immune system | 2023-07-31 | 2024-07-31 | x-ray diffraction | 3.07 | 0.286 | 0.243 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | A | B | EEQLVESGGGLVQPGGSLRLSCTASGFTLSTYFMFWVRQPPGKGLEWVSGINLGGDKTWSTDSVKGRFTTSKENAKNTLYLQMDSLRPEDTAVYYCARLRSQRGFDHWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | DIQMTQSPSSLSASVGDRVTFTCRASQGVNNWLAWYQQKPGKAPKLLIYRASNLETGVPSRFSGSGSGTEFTLTISSLQPEDIATYYCQQHDNFPYTFGQGTKVVIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC | EEQLVESGGGLVQPGGSLRLSCTASGFTLSTYFMFWVRQPPGKGLEWVSGINLGGDKTWSTDSVKGRFTTSKENAKNTLYLQMDSLRPEDTAVYYCARLRSQRGFDHWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | DIQMTQSPSSLSASVGDRVTFTCRASQGVNNWLAWYQQKPGKAPKLLIYRASNLETGVPSRFSGSGSGTEFTLTISSLQPEDIATYYCQQHDNFPYTFGQGTKVVIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC | 21.420647 | 24.03173 | 221 | 212 | 220 | 212 | 220 | 212 | 90 | neutralizing antibody chm-16 heavy chain | neutralizing antibody chm-16 light chain | macaca mulatta | macaca mulatta | M | peptide | stem helix peptide of spike protein s2' | severe acute respiratory syndrome coronavirus 2 | 32 | 18 | 0.82 | HL | train |
8tmy_C_D | 8tmy | crystal structure of sars-cov-2 spike stem helix peptide in complex with neutralizing antibody chm-16 | no | viral protein/immune system | 2023-07-31 | 2024-07-31 | x-ray diffraction | 3.07 | 0.286 | 0.243 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | C | D | EEQLVESGGGLVQPGGSLRLSCTASGFTLSTYFMFWVRQPPGKGLEWVSGINLGGDKTWSTDSVKGRFTTSKENAKNTLYLQMDSLRPEDTAVYYCARLRSQRGFDHWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | DIQMTQSPSSLSASVGDRVTFTCRASQGVNNWLAWYQQKPGKAPKLLIYRASNLETGVPSRFSGSGSGTEFTLTISSLQPEDIATYYCQQHDNFPYTFGQGTKVVIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC | EEQLVESGGGLVQPGGSLRLSCTASGFTLSTYFMFWVRQPPGKGLEWVSGINLGGDKTWSTDSVKGRFTTSKENAKNTLYLQMDSLRPEDTAVYYCARLRSQRGFDHWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | DIQMTQSPSSLSASVGDRVTFTCRASQGVNNWLAWYQQKPGKAPKLLIYRASNLETGVPSRFSGSGSGTEFTLTISSLQPEDIATYYCQQHDNFPYTFGQGTKVVIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC | 20.876335 | 23.78736 | 221 | 212 | 214 | 212 | 219 | 212 | 83 | neutralizing antibody chm-16 heavy chain | neutralizing antibody chm-16 light chain | macaca mulatta | macaca mulatta | N | peptide | stem helix peptide of spike protein s2' | severe acute respiratory syndrome coronavirus 2 | 36 | 19 | 0.83 | HL | train |
8tmy_H_L | 8tmy | crystal structure of sars-cov-2 spike stem helix peptide in complex with neutralizing antibody chm-16 | no | viral protein/immune system | 2023-07-31 | 2024-07-31 | x-ray diffraction | 3.07 | 0.286 | 0.243 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EEQLVESGGGLVQPGGSLRLSCTASGFTLSTYFMFWVRQPPGKGLEWVSGINLGGDKTWSTDSVKGRFTTSKENAKNTLYLQMDSLRPEDTAVYYCARLRSQRGFDHWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | DIQMTQSPSSLSASVGDRVTFTCRASQGVNNWLAWYQQKPGKAPKLLIYRASNLETGVPSRFSGSGSGTEFTLTISSLQPEDIATYYCQQHDNFPYTFGQGTKVVIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC | EEQLVESGGGLVQPGGSLRLSCTASGFTLSTYFMFWVRQPPGKGLEWVSGINLGGDKTWSTDSVKGRFTTSKENAKNTLYLQMDSLRPEDTAVYYCARLRSQRGFDHWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | DIQMTQSPSSLSASVGDRVTFTCRASQGVNNWLAWYQQKPGKAPKLLIYRASNLETGVPSRFSGSGSGTEFTLTISSLQPEDIATYYCQQHDNFPYTFGQGTKVVIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC | 21.100012 | 23.783676 | 221 | 212 | 213 | 212 | 219 | 212 | 82 | neutralizing antibody chm-16 heavy chain | neutralizing antibody chm-16 light chain | macaca mulatta | macaca mulatta | S | peptide | stem helix peptide of spike protein s2' | severe acute respiratory syndrome coronavirus 2 | 32 | 18 | 0.82 | HL | train |
8tnh_J | 8tnh | cryo-em structure of hiv-1 env bg505 ds-sosip in complex with broadly neutralizing llama nanobody g36 targeting the cd4-binding site | no | viral protein/immune system | 2023-08-01 | 2024-05-08 | electron microscopy | 3.32 | N.A. | N.A. | 38704686 | 10.1002/advs.202309268 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | J | N.A. | QVQLQESGGGSVQPGGSLRLSCAVSGLDVESVTIGWIRQAPGKEREEVGCISGNFDQTYYVDSVKGRFTISRVNEENTVYLQMDNLKPEDTATYYCVTDRQFYCALHRLPVSQYRGQGTQVTVSS | N.A. | QVQLQESGGGSVQPGGSLRLSCAVSGLDVESVTIGWIRQAPGKEREEVGCISGNFDQTYYVDSVKGRFTISRVNEENTVYLQMDNLKPEDTATYYCVTDRQFYCALHRLPVSQYRGQGTQVTVSS | N.A. | 14.065425 | 0 | 125 | 0 | 125 | 0 | 125 | 0 | 0 | cd4-binding site nanobody g36 | N.A. | lama glama | N.A. | A | protein | hiv-1 bg505 ds-sosip gp120 | human immunodeficiency virus 1 | 45 | 15 | 0.88 | H_only | train |
8tnh_H | 8tnh | cryo-em structure of hiv-1 env bg505 ds-sosip in complex with broadly neutralizing llama nanobody g36 targeting the cd4-binding site | no | viral protein/immune system | 2023-08-01 | 2024-05-08 | electron microscopy | 3.32 | N.A. | N.A. | 38704686 | 10.1002/advs.202309268 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | H | N.A. | QVQLQESGGGSVQPGGSLRLSCAVSGLDVESVTIGWIRQAPGKEREEVGCISGNFDQTYYVDSVKGRFTISRVNEENTVYLQMDNLKPEDTATYYCVTDRQFYCALHRLPVSQYRGQGTQVTVSS | N.A. | QVQLQESGGGSVQPGGSLRLSCAVSGLDVESVTIGWIRQAPGKEREEVGCISGNFDQTYYVDSVKGRFTISRVNEENTVYLQMDNLKPEDTATYYCVTDRQFYCALHRLPVSQYRGQGTQVTVSS | N.A. | 14.065057 | 0 | 125 | 0 | 125 | 0 | 125 | 0 | 0 | cd4-binding site nanobody g36 | N.A. | lama glama | N.A. | C | protein | hiv-1 bg505 ds-sosip gp120 | human immunodeficiency virus 1 | 49 | 16 | 0.89 | H_only | train |
8tnh_I | 8tnh | cryo-em structure of hiv-1 env bg505 ds-sosip in complex with broadly neutralizing llama nanobody g36 targeting the cd4-binding site | no | viral protein/immune system | 2023-08-01 | 2024-05-08 | electron microscopy | 3.32 | N.A. | N.A. | 38704686 | 10.1002/advs.202309268 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | I | N.A. | QVQLQESGGGSVQPGGSLRLSCAVSGLDVESVTIGWIRQAPGKEREEVGCISGNFDQTYYVDSVKGRFTISRVNEENTVYLQMDNLKPEDTATYYCVTDRQFYCALHRLPVSQYRGQGTQVTVSS | N.A. | QVQLQESGGGSVQPGGSLRLSCAVSGLDVESVTIGWIRQAPGKEREEVGCISGNFDQTYYVDSVKGRFTISRVNEENTVYLQMDNLKPEDTATYYCVTDRQFYCALHRLPVSQYRGQGTQVTVSS | N.A. | 14.063453 | 0 | 125 | 0 | 125 | 0 | 125 | 0 | 0 | cd4-binding site nanobody g36 | N.A. | lama glama | N.A. | E | protein | hiv-1 bg505 ds-sosip gp120 | human immunodeficiency virus 1 | 47 | 15 | 0.88 | H_only | train |
8tni_X_J | 8tni | cryo-em structure of hiv-1 env bg505 ds-sosip in complex with broadly neutralizing bi-specific antibody cap256l-r27 targeting the cd4-binding site and the v2-apex | no | viral protein/immune system | 2023-08-01 | 2024-05-08 | electron microscopy | 3.61 | N.A. | N.A. | 38704686 | 10.1002/advs.202309268 | 0 | auth_asym_id | VH:VHVL | IGHV3 | N.A. | X | J | QVQLVESGGGVVQPGTSLRLSCAASQFRFDGYGMHWVRQAPGKGLEWVASISHDGIKKYHAEKVWGRFTISRDNSKNTLYLQMNSLRPEDTALYYCAKDLREDECEEWWSDYYDFGAQLPCAKSRGGLVGIADNWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | QVQLQESGGGLVQPGGSLRLSCVASGFDLENYSIGWFRQAPGKAREGVACLSKNSGIGHSVKGRFTISRDGDSNTWFLQMGALEAEDTAVYTCATYNRACANYVTIWPEFRGQGTQVTVSSGGSGGGGSGGGGSGGQSVLTQPPSVSAAPGQKVTISCSGNTSNIGNNFVSWYQQRPGRAPQLLIYETDKRPSGIPDRFSASKSGTSGTLAITGLQTGDEADYYCATWAASLSSARVFGTGTQVIVLGQPKVNPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLS... | QVQLVESGGGVVQPGTSLRLSCAASQFRFDGYGMHWVRQAPGKGLEWVASISHDGIKKYHAEKVWGRFTISRDNSKNTLYLQMNSLRPEDTALYYCAKDLREDECEEWWSDYYDFGAQLPCAKSRGGLVGIADNWGQGTMVTVS | QVQLQESGGGLVQPGGSLRLSCVASGFDLENYSIGWFRQAPGKAREGVACLSKNSGIGHSVKGRFTISRDGDSNTWFLQMGALEAEDTAVYTCATYNRACANYVTIWPEFRGQGTQVTVSSGGSGGGGSGGGGSGGQSVLTQPPSVSAAPGQKVTISCSGNTSNIGNNFVSWYQQRPGRAPQLLIYETDKRPSGIPDRFSASKSGTSGTLAITGLQTGDEADYYCATWAASLSSARVFGTGTQVIVL | 17.236338 | 28.54691 | 247 | 353 | 142 | 232 | 144 | 247 | 46 | heavy chain of bi-specific antibody cap256l-r27 | light chain of bi-specific antibody cap256l-r27 | homo sapiens | homo sapiens | A;E | protein;protein | hiv-1 bg505 ds-sosip gp120;hiv-1 bg505 ds-sosip gp120 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 59;26 | 21;12 | 0.91;0.92 | HL | train |
8tni_I | 8tni | cryo-em structure of hiv-1 env bg505 ds-sosip in complex with broadly neutralizing bi-specific antibody cap256l-r27 targeting the cd4-binding site and the v2-apex | no | viral protein/immune system | 2023-08-01 | 2024-05-08 | electron microscopy | 3.61 | N.A. | N.A. | 38704686 | 10.1002/advs.202309268 | 0 | auth_asym_id | VH | IGHV3 | N.A. | I | N.A. | QVQLQESGGGLVQPGGSLRLSCVASGFDLENYSIGWFRQAPGKAREGVACLSKNSGIGHSVKGRFTISRDGDSNTWFLQMGALEAEDTAVYTCATYNRACANYVTIWPEFRGQGTQVTVSSGGSGGGGSGGGGSGGQSVLTQPPSVSAAPGQKVTISCSGNTSNIGNNFVSWYQQRPGRAPQLLIYETDKRPSGIPDRFSASKSGTSGTLAITGLQTGDEADYYCATWAASLSSARVFGTGTQVIVLGQPKVNPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLS... | N.A. | QVQLQESGGGLVQPGGSLRLSCVASGFDLENYSIGWFRQAPGKAREGVACLSKNSGIGHSVKGRFTISRDGDSNTWFLQMGALEAEDTAVYTCATYNRACANYVTIWPEFRGQGTQVTVSS | N.A. | 13.691096 | 0 | 353 | 0 | 121 | 0 | 121 | 0 | 0 | light chain of bi-specific antibody cap256l-r27 | N.A. | homo sapiens | N.A. | C | protein | hiv-1 bg505 ds-sosip gp120 | human immunodeficiency virus 1 | 48 | 16 | 0.8 | H_only | train |
8tni_H | 8tni | cryo-em structure of hiv-1 env bg505 ds-sosip in complex with broadly neutralizing bi-specific antibody cap256l-r27 targeting the cd4-binding site and the v2-apex | no | viral protein/immune system | 2023-08-01 | 2024-05-08 | electron microscopy | 3.61 | N.A. | N.A. | 38704686 | 10.1002/advs.202309268 | 0 | auth_asym_id | VH | IGHV3 | N.A. | H | N.A. | QVQLQESGGGLVQPGGSLRLSCVASGFDLENYSIGWFRQAPGKAREGVACLSKNSGIGHSVKGRFTISRDGDSNTWFLQMGALEAEDTAVYTCATYNRACANYVTIWPEFRGQGTQVTVSSGGSGGGGSGGGGSGGQSVLTQPPSVSAAPGQKVTISCSGNTSNIGNNFVSWYQQRPGRAPQLLIYETDKRPSGIPDRFSASKSGTSGTLAITGLQTGDEADYYCATWAASLSSARVFGTGTQVIVLGQPKVNPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLS... | N.A. | QVQLQESGGGLVQPGGSLRLSCVASGFDLENYSIGWFRQAPGKAREGVACLSKNSGIGHSVKGRFTISRDGDSNTWFLQMGALEAEDTAVYTCATYNRACANYVTIWPEFRGQGTQVTVSS | N.A. | 13.660908 | 0 | 353 | 0 | 121 | 0 | 121 | 0 | 0 | light chain of bi-specific antibody cap256l-r27 | N.A. | homo sapiens | N.A. | E | protein | hiv-1 bg505 ds-sosip gp120 | human immunodeficiency virus 1 | 48 | 15 | 0.75 | H_only | train |
8k9k_H | 8k9k | full agonist-bound mu-type opioid receptor-g protein complex | yes | signaling protein | 2023-08-01 | 2024-05-29 | electron microscopy | 2.98 | N.A. | N.A. | 38740791 | 10.1038/s41467-024-47792-6 | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAALEVLFQ | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | 17.439106 | 0 | 257 | 0 | 235 | 0 | 248 | 0 | 0 | scfv16 | N.A. | synthetic construct | N.A. | A;B | protein;protein | g protein subunit alpha i3;guanine nucleotide binding protein, beta polypeptide 1 | macaca mulatta;homo sapiens | 32;25 | 18;9 | 0.86;0.75 | H_only | train |
8k9l_H | 8k9l | full agonist- and positive allosteric modulator-bound mu-type opioid receptor-g protein complex | no | signaling protein | 2023-08-01 | 2024-05-29 | electron microscopy | 3.05 | N.A. | N.A. | 38740791 | 10.1038/s41467-024-47792-6 | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAALEVLFQ | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | 17.510197 | 0 | 257 | 0 | 235 | 0 | 248 | 0 | 0 | scfv16 | N.A. | synthetic construct | N.A. | A;B | protein;protein | g protein subunit alpha i3;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | macaca mulatta;homo sapiens | 33;26 | 19;10 | 0.86;0.77 | H_only | train |
8k9j_G_F | 8k9j | sars-cov-2 spike protein in complex with two s2h5 fabs on ntd-1 and ntd-2 | yes | viral protein | 2023-08-01 | 2024-07-31 | electron microscopy | 6.6 | N.A. | N.A. | N.A. | 10.3969/j.issn.1000-6281.2024.03.009 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV2 | G | F | EVQLLQSGAELVRPGALVKLSCKASGFNIKDYYMHWVKQRPEQGLEWFGWIDPENGNTIYDPKFQGKASITADTSSNTAYLQLSSLTSEDTAVYYCAGSGNYEDAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKI | DVLMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVQLLQSGAELVRPGALVKLSCKASGFNIKDYYMHWVKQRPEQGLEWFGWIDPENGNTIYDPKFQGKASITADTSSNTAYLQLSSLTSEDTAVYYCAGSGNYEDAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKI | DVLMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | 22.929668 | 22.811958 | 216 | 219 | 216 | 219 | 216 | 219 | 89 | heavy chain of s2h5 fab | light chain of s2h5 fab | mus musculus | mus musculus | D | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 30 | 12 | 0.86 | HL | train |
8k9j_A_B | 8k9j | sars-cov-2 spike protein in complex with two s2h5 fabs on ntd-1 and ntd-2 | yes | viral protein | 2023-08-01 | 2024-07-31 | electron microscopy | 6.6 | N.A. | N.A. | N.A. | 10.3969/j.issn.1000-6281.2024.03.009 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV2 | A | B | EVQLLQSGAELVRPGALVKLSCKASGFNIKDYYMHWVKQRPEQGLEWFGWIDPENGNTIYDPKFQGKASITADTSSNTAYLQLSSLTSEDTAVYYCAGSGNYEDAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKI | DVLMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVQLLQSGAELVRPGALVKLSCKASGFNIKDYYMHWVKQRPEQGLEWFGWIDPENGNTIYDPKFQGKASITADTSSNTAYLQLSSLTSEDTAVYYCAGSGNYEDAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKI | DVLMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | 22.365894 | 23.23473 | 216 | 219 | 216 | 219 | 216 | 219 | 105 | heavy chain of s2h5 fab | light chain of s2h5 fab | mus musculus | mus musculus | E | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 51 | 24 | 0.83 | HL | train |
8tn4_H_L | 8tn4 | the crystal structure of a human monoclonal antibody (aab), termed tg10, used to study poly-n-acetyl-glucosamine broadly expressed in biofilm-forming pathogenclonal antibody | no | immune system | 2023-08-01 | 2024-12-04 | x-ray diffraction | 1.4 | 0.17 | 0.135 | 39637855 | 10.1016/j.chembiol.2024.11.005 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | H | L | EVQLVESGGGLVQPGGSLRLSCAVSGFPFSSYWMSWVRQAPGKGLEWVANIKEDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCATDPDVGLSDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGDRATHSCRASQSVSRSYLAWYQQKPGQTPRLFIYGASNRATGIPDRFSGSGSGTYFTLTISRLEPEDFAVYYCQQYDSAPDTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAVSGFPFSSYWMSWVRQAPGKGLEWVANIKEDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCATDPDVGLSDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGDRATHSCRASQSVSRSYLAWYQQKPGQTPRLFIYGASNRATGIPDRFSGSGSGTYFTLTISRLEPEDFAVYYCQQYDSAPDTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.453873 | 23.0365 | 221 | 215 | 221 | 215 | 221 | 215 | 110 | tg10, heavy chain | tg10, light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8tn7_H_L | 8tn7 | the crystal structure of a human monoclonal antibody (aab), termed tg10, complexed with a disaccharide | no | immune system | 2023-08-01 | 2024-12-04 | x-ray diffraction | 1.56 | 0.199 | 0.17 | 39637855 | 10.1016/j.chembiol.2024.11.005 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | H | L | EVQLVESGGGLVQPGGSLRLSCAVSGFPFSSYWMSWVRQAPGKGLEWVANIKEDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCATDPDVGLSDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | EIVLTQSPGTLSLSPGDRATHSCRASQSVSRSYLAWYQQKPGQTPRLFIYGASNRATGIPDRFSGSGSGTYFTLTISRLEPEDFAVYYCQQYDSAPDTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | EVQLVESGGGLVQPGGSLRLSCAVSGFPFSSYWMSWVRQAPGKGLEWVANIKEDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCATDPDVGLSDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | EIVLTQSPGTLSLSPGDRATHSCRASQSVSRSYLAWYQQKPGQTPRLFIYGASNRATGIPDRFSGSGSGTYFTLTISRLEPEDFAVYYCQQYDSAPDTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 21.29273 | 22.859974 | 220 | 214 | 220 | 214 | 220 | 214 | 105 | tg10, heavy chain | tg10, light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8tnn_H_G | 8tnn | crystal structure of epstein-barr virus gh/gl/gp42 in complex with gp42 antibody a10 | no | immune system | 2023-08-02 | 2024-03-27 | x-ray diffraction | 3.36 | 0.281 | 0.234 | 38479361 | 10.1016/j.immuni.2024.02.008 | 0 | auth_asym_id | FabH:FabL | IGHV6 | IGLV3 | H | G | NSQVQLQESGPGLVKPSQTLSLTCAISGDSVSSNSATWNWIRQSPSRGLEWLGRTYYRSKWYYDYAQSVQNRISINPDTSKNQFSLQLNSVTPEDMAVYYCARGDFDAFDFWGQGLRVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ | NSYELTQPPSVSAASGQTARITCGGDNIGSKNVQWYQQKPAQAPVLVIYADSKRPSGVPERFSGSNSGNTATLTISGVEAGDEADYYCQVWDRSSNIFGVGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLQESGPGLVKPSQTLSLTCAISGDSVSSNSATWNWIRQSPSRGLEWLGRTYYRSKWYYDYAQSVQNRISINPDTSKNQFSLQLNSVTPEDMAVYYCARGDFDAFDFWGQGLRVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | YELTQPPSVSAASGQTARITCGGDNIGSKNVQWYQQKPAQAPVLVIYADSKRPSGVPERFSGSNSGNTATLTISGVEAGDEADYYCQVWDRSSNIFGVGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKT | 20.638956 | 23.358923 | 234 | 213 | 210 | 204 | 220 | 204 | 73 | a10 heavy chain | a10 light chain | macaca fascicularis | macaca fascicularis | C | protein | glycoprotein 42 | human herpesvirus 4 strain b95-8 | 39 | 19 | 0.9 | HL | train |
8tnn_J_I | 8tnn | crystal structure of epstein-barr virus gh/gl/gp42 in complex with gp42 antibody a10 | no | immune system | 2023-08-02 | 2024-03-27 | x-ray diffraction | 3.36 | 0.281 | 0.234 | 38479361 | 10.1016/j.immuni.2024.02.008 | 0 | auth_asym_id | FabH:FabL | IGHV6 | IGLV3 | J | I | NSQVQLQESGPGLVKPSQTLSLTCAISGDSVSSNSATWNWIRQSPSRGLEWLGRTYYRSKWYYDYAQSVQNRISINPDTSKNQFSLQLNSVTPEDMAVYYCARGDFDAFDFWGQGLRVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ | NSYELTQPPSVSAASGQTARITCGGDNIGSKNVQWYQQKPAQAPVLVIYADSKRPSGVPERFSGSNSGNTATLTISGVEAGDEADYYCQVWDRSSNIFGVGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLQESGPGLVKPSQTLSLTCAISGDSVSSNSATWNWIRQSPSRGLEWLGRTYYRSKWYYDYAQSVQNRISINPDTSKNQFSLQLNSVTPEDMAVYYCARGDFDAFDFWGQGLRVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | YELTQPPSVSAASGQTARITCGGDNIGSKNVQWYQQKPAQAPVLVIYADSKRPSGVPERFSGSNSGNTATLTISGVEAGDEADYYCQVWDRSSNIFGVGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKT | 21.079557 | 23.528725 | 234 | 213 | 212 | 204 | 220 | 204 | 73 | a10 heavy chain | a10 light chain | macaca fascicularis | macaca fascicularis | F | protein | glycoprotein 42 | human herpesvirus 4 strain b95-8 | 39 | 18 | 0.86 | HL | train |
8tnt_E_D | 8tnt | crystal structure of epstein-barr virus gh/gl/gp42 in complex with antibodies f-2-1 and 769c2 | no | immune system | 2023-08-02 | 2024-03-27 | x-ray diffraction | 3.15 | 0.287 | 0.255 | 38479361 | 10.1016/j.immuni.2024.02.008 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV2 | E | D | EVQLVESGGGLVKPGGSLRLSCAASGFTFSTYAMDWVRQAPGKGLEWVSLISSRSSNIYYSDSVKGRFTISRDNAKNSLFLQMNSLRAEDTAVYYCAREAGGFHSHFDMWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ | QSVLTQPASVSGSLGQSVTISCTGTSSDVGGYDYVSWYQQHPGKALKLMIFEVNNRPSGVSTRFSGSKSGNTASLTISGLQAEDEADYYCNSYSTTTTWVFGGGTSLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLVESGGGLVKPGGSLRLSCAASGFTFSTYAMDWVRQAPGKGLEWVSLISSRSSNIYYSDSVKGRFTISRDNAKNSLFLQMNSLRAEDTAVYYCAREAGGFHSHFDMWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | QSVLTQPASVSGSLGQSVTISCTGTSSDVGGYDYVSWYQQHPGKALKLMIFEVNNRPSGVSTRFSGSKSGNTASLTISGLQAEDEADYYCNSYSTTTTWVFGGGTSLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE | 21.990274 | 23.338356 | 232 | 216 | 220 | 214 | 220 | 214 | 92 | 769c2 heavy chain | 769c2 light chain | homo sapiens | homo sapiens | A;B | protein;protein | envelope glycoprotein h;envelope glycoprotein l | epstein-barr virus;epstein-barr virus | 38;13 | 20;6 | 0.77;1.0 | HL | train |
8tnt_G_F | 8tnt | crystal structure of epstein-barr virus gh/gl/gp42 in complex with antibodies f-2-1 and 769c2 | no | immune system | 2023-08-02 | 2024-03-27 | x-ray diffraction | 3.15 | 0.287 | 0.255 | 38479361 | 10.1016/j.immuni.2024.02.008 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV7 | G | F | EVKLLESGGGLVQPGGSLKLSCAASGFDFSRYWMSWVRQAPGKGLEWIGEINPDSSTINYTSSLKDKFIISRDNAKNTLYLQMSKVRSEDTALYYCARQGDWWYFDVWGAGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ | DIVLTQSPASLAVSLGQRATISCRASKSVSTSGYSYMHWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSGTDFTLNIHPVEEEDAATYYCLHSRDLPPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVKLLESGGGLVQPGGSLKLSCAASGFDFSRYWMSWVRQAPGKGLEWIGEINPDSSTINYTSSLKDKFIISRDNAKNTLYLQMSKVRSEDTALYYCARQGDWWYFDVWGAGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | DIVLTQSPASLAVSLGQRATISCRASKSVSTSGYSYMHWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSGTDFTLNIHPVEEEDAATYYCLHSRDLPPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.341797 | 23.60347 | 230 | 218 | 220 | 218 | 220 | 218 | 91 | f-2-1 heavy chain | f-2-1 light chain | mus musculus | mus musculus | C | protein | glycoprotein 42 | epstein-barr virus | 39 | 18 | 0.9 | HL | train |
8tnl_A_B | 8tnl | cryoem structure of h7 hemagglutinin from a/shanghai2/2013 h7n9 in complex with a human neutralizing antibody h7.hk1 | no | viral protein/immune system | 2023-08-02 | 2024-05-15 | electron microscopy | 3.62 | N.A. | N.A. | 38802413 | 10.1038/s41467-024-48758-4 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV2 | A | B | QVQLQESGPGLVKPSETLSLTCSVSGGSINSYYWTWIRQPPGKGLEWVGYIYHSGSTSYNPSLKSRITISVAPSKNHFSLELTSMTAADTAVYYCARLGGHGDYGSDYWGQGTLVTVSS | DIVMTQSPVSLPVTPGEPASISCNSSQSLLHSNGYAHLDWYLQKPGQSPKLMIYLGLNRAFGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPFTFGPGTRVDIK | QVQLQESGPGLVKPSETLSLTCSVSGGSINSYYWTWIRQPPGKGLEWVGYIYHSGSTSYNPSLKSRITISVAPSKNHFSLELTSMTAADTAVYYCARLGGHGDYGSDYWGQGTLVTVSS | DIVMTQSPVSLPVTPGEPASISCNSSQSLLHSNGYAHLDWYLQKPGQSPKLMIYLGLNRAFGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPFTFGPGTRVDIK | 13.797784 | 13.734453 | 119 | 112 | 119 | 112 | 119 | 112 | 49 | h7.hk1 neutralizing antibody heavy chain | h7.hk1 neutralizing antibody heavy chain | homo sapiens | homo sapiens | C | protein | hemagglutinin | influenza a virus (a/shanghai/02/2013(h7n9)) | 49 | 21 | 0.81 | HL | train |
8tnl_H_L | 8tnl | cryoem structure of h7 hemagglutinin from a/shanghai2/2013 h7n9 in complex with a human neutralizing antibody h7.hk1 | no | viral protein/immune system | 2023-08-02 | 2024-05-15 | electron microscopy | 3.62 | N.A. | N.A. | 38802413 | 10.1038/s41467-024-48758-4 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV2 | H | L | QVQLQESGPGLVKPSETLSLTCSVSGGSINSYYWTWIRQPPGKGLEWVGYIYHSGSTSYNPSLKSRITISVAPSKNHFSLELTSMTAADTAVYYCARLGGHGDYGSDYWGQGTLVTVSS | DIVMTQSPVSLPVTPGEPASISCNSSQSLLHSNGYAHLDWYLQKPGQSPKLMIYLGLNRAFGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPFTFGPGTRVDIK | QVQLQESGPGLVKPSETLSLTCSVSGGSINSYYWTWIRQPPGKGLEWVGYIYHSGSTSYNPSLKSRITISVAPSKNHFSLELTSMTAADTAVYYCARLGGHGDYGSDYWGQGTLVTVSS | DIVMTQSPVSLPVTPGEPASISCNSSQSLLHSNGYAHLDWYLQKPGQSPKLMIYLGLNRAFGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPFTFGPGTRVDIK | 13.81074 | 13.683872 | 119 | 112 | 119 | 112 | 119 | 112 | 48 | h7.hk1 neutralizing antibody heavy chain | h7.hk1 neutralizing antibody heavy chain | homo sapiens | homo sapiens | I | protein | hemagglutinin | influenza a virus (a/shanghai/02/2013(h7n9)) | 45 | 18 | 0.82 | HL | train |
8tnl_D_E | 8tnl | cryoem structure of h7 hemagglutinin from a/shanghai2/2013 h7n9 in complex with a human neutralizing antibody h7.hk1 | no | viral protein/immune system | 2023-08-02 | 2024-05-15 | electron microscopy | 3.62 | N.A. | N.A. | 38802413 | 10.1038/s41467-024-48758-4 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV2 | D | E | QVQLQESGPGLVKPSETLSLTCSVSGGSINSYYWTWIRQPPGKGLEWVGYIYHSGSTSYNPSLKSRITISVAPSKNHFSLELTSMTAADTAVYYCARLGGHGDYGSDYWGQGTLVTVSS | DIVMTQSPVSLPVTPGEPASISCNSSQSLLHSNGYAHLDWYLQKPGQSPKLMIYLGLNRAFGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPFTFGPGTRVDIK | QVQLQESGPGLVKPSETLSLTCSVSGGSINSYYWTWIRQPPGKGLEWVGYIYHSGSTSYNPSLKSRITISVAPSKNHFSLELTSMTAADTAVYYCARLGGHGDYGSDYWGQGTLVTVSS | DIVMTQSPVSLPVTPGEPASISCNSSQSLLHSNGYAHLDWYLQKPGQSPKLMIYLGLNRAFGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPFTFGPGTRVDIK | 13.798205 | 13.715266 | 119 | 112 | 119 | 112 | 119 | 112 | 48 | h7.hk1 neutralizing antibody heavy chain | h7.hk1 neutralizing antibody heavy chain | homo sapiens | homo sapiens | K | protein | hemagglutinin | influenza a virus (a/shanghai/02/2013(h7n9)) | 50 | 20 | 0.8 | HL | train |
8tnu_J_K | 8tnu | cryo-em structure of trnm-b*01 fab in complex with hiv-1 env trimer bg505.ds sosip | yes | viral protein/immune system | 2023-08-02 | 2024-08-07 | electron microscopy | 3.36 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | J | K | VQLQESGPGVVKPSETLSLTCEVSLHASRVGSYYWSWIRQSQGQRPEWMGGLYSDTGNTDYNPSLKSRVSLSRDMSKKQFFLNLRSVTATDTAVYFCVSRYVDHWTNRRFDVWGPGAQVTVTSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTC | DIQMTQSPSSLSASVGDRVTVTCRASLDINKDLNWYQQKPGKAPALLIYAASTLQTGVSSRFSGSGSGTQFTLTISSLQPEDFATYYCLQDYSFPLTFGGGTKIDLKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRAA | VQLQESGPGVVKPSETLSLTCEVSLHASRVGSYYWSWIRQSQGQRPEWMGGLYSDTGNTDYNPSLKSRVSLSRDMSKKQFFLNLRSVTATDTAVYFCVSRYVDHWTNRRFDVWGPGAQVTVTSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTC | DIQMTQSPSSLSASVGDRVTVTCRASLDINKDLNWYQQKPGKAPALLIYAASTLQTGVSSRFSGSGSGTQFTLTISSLQPEDFATYYCLQDYSFPLTFGGGTKIDLKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRAA | 24.244474 | 21.581156 | 226 | 213 | 226 | 213 | 226 | 213 | 96 | trnm-b*01 heavy chain | trnm-b*01 light chain | macaca mulatta | macaca mulatta | X;Y | protein;protein | transmembrane protein gp41;transmembrane protein gp41 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 35;13 | 19;6 | 0.9;0.86 | HL | train |
8tnu_H_L | 8tnu | cryo-em structure of trnm-b*01 fab in complex with hiv-1 env trimer bg505.ds sosip | yes | viral protein/immune system | 2023-08-02 | 2024-08-07 | electron microscopy | 3.36 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | H | L | VQLQESGPGVVKPSETLSLTCEVSLHASRVGSYYWSWIRQSQGQRPEWMGGLYSDTGNTDYNPSLKSRVSLSRDMSKKQFFLNLRSVTATDTAVYFCVSRYVDHWTNRRFDVWGPGAQVTVTSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTC | DIQMTQSPSSLSASVGDRVTVTCRASLDINKDLNWYQQKPGKAPALLIYAASTLQTGVSSRFSGSGSGTQFTLTISSLQPEDFATYYCLQDYSFPLTFGGGTKIDLKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRAA | VQLQESGPGVVKPSETLSLTCEVSLHASRVGSYYWSWIRQSQGQRPEWMGGLYSDTGNTDYNPSLKSRVSLSRDMSKKQFFLNLRSVTATDTAVYFCVSRYVDHWTNRRFDVWGPGAQVTVTSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTC | DIQMTQSPSSLSASVGDRVTVTCRASLDINKDLNWYQQKPGKAPALLIYAASTLQTGVSSRFSGSGSGTQFTLTISSLQPEDFATYYCLQDYSFPLTFGGGTKIDLKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRAA | 24.21304 | 21.513885 | 226 | 213 | 226 | 213 | 226 | 213 | 98 | trnm-b*01 heavy chain | trnm-b*01 light chain | macaca mulatta | macaca mulatta | Y;Z | protein;protein | transmembrane protein gp41;transmembrane protein gp41 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 36;12 | 20;7 | 0.95;1.0 | HL | train |
8tnu_B_C | 8tnu | cryo-em structure of trnm-b*01 fab in complex with hiv-1 env trimer bg505.ds sosip | yes | viral protein/immune system | 2023-08-02 | 2024-08-07 | electron microscopy | 3.36 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | B | C | VQLQESGPGVVKPSETLSLTCEVSLHASRVGSYYWSWIRQSQGQRPEWMGGLYSDTGNTDYNPSLKSRVSLSRDMSKKQFFLNLRSVTATDTAVYFCVSRYVDHWTNRRFDVWGPGAQVTVTSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTC | DIQMTQSPSSLSASVGDRVTVTCRASLDINKDLNWYQQKPGKAPALLIYAASTLQTGVSSRFSGSGSGTQFTLTISSLQPEDFATYYCLQDYSFPLTFGGGTKIDLKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRAA | VQLQESGPGVVKPSETLSLTCEVSLHASRVGSYYWSWIRQSQGQRPEWMGGLYSDTGNTDYNPSLKSRVSLSRDMSKKQFFLNLRSVTATDTAVYFCVSRYVDHWTNRRFDVWGPGAQVTVTSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTC | DIQMTQSPSSLSASVGDRVTVTCRASLDINKDLNWYQQKPGKAPALLIYAASTLQTGVSSRFSGSGSGTQFTLTISSLQPEDFATYYCLQDYSFPLTFGGGTKIDLKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRAA | 24.056126 | 21.450224 | 226 | 213 | 223 | 213 | 226 | 213 | 103 | trnm-b*01 heavy chain | trnm-b*01 light chain | macaca mulatta | macaca mulatta | Z | protein | transmembrane protein gp41 | human immunodeficiency virus 1 | 23 | 12 | 1 | HL | train |
8too_B_A | 8too | crystal structure of epstein-barr virus gp42 in complex with antibody 4c12 | no | immune system | 2023-08-03 | 2024-03-27 | x-ray diffraction | 2.6 | 0.275 | 0.226 | 38479361 | 10.1016/j.immuni.2024.02.008 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | B | A | EVQLQQSGPELVKPGASVKISCKASGYTFTDYNMHWVKQSHGKNLEWIGFIYLYNGGTGYNQNFKSKATLTVDNSSSTAYMELRSLTSEDSAVFYCARDYYGNPYAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQGP | DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLRSGVPSRFSGSGSGTDYSLTINNLEQEDIATYFCQQGNTLPFTFGSGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLQQSGPELVKPGASVKISCKASGYTFTDYNMHWVKQSHGKNLEWIGFIYLYNGGTGYNQNFKSKATLTVDNSSSTAYMELRSLTSEDSAVFYCARDYYGNPYAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLRSGVPSRFSGSGSGTDYSLTINNLEQEDIATYFCQQGNTLPFTFGSGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 21.687845 | 23.221943 | 234 | 214 | 220 | 211 | 220 | 211 | 106 | 4c12 heavy chain | 4c12 light chain | mus musculus | mus musculus | I | protein | glycoprotein 42 | epstein-barr virus | 46 | 20 | 0.8 | HL | train |
8too_D_C | 8too | crystal structure of epstein-barr virus gp42 in complex with antibody 4c12 | no | immune system | 2023-08-03 | 2024-03-27 | x-ray diffraction | 2.6 | 0.275 | 0.226 | 38479361 | 10.1016/j.immuni.2024.02.008 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | D | C | EVQLQQSGPELVKPGASVKISCKASGYTFTDYNMHWVKQSHGKNLEWIGFIYLYNGGTGYNQNFKSKATLTVDNSSSTAYMELRSLTSEDSAVFYCARDYYGNPYAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQGP | DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLRSGVPSRFSGSGSGTDYSLTINNLEQEDIATYFCQQGNTLPFTFGSGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLQQSGPELVKPGASVKISCKASGYTFTDYNMHWVKQSHGKNLEWIGFIYLYNGGTGYNQNFKSKATLTVDNSSSTAYMELRSLTSEDSAVFYCARDYYGNPYAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLRSGVPSRFSGSGSGTDYSLTINNLEQEDIATYFCQQGNTLPFTFGSGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 21.810312 | 23.289898 | 234 | 214 | 220 | 211 | 220 | 211 | 106 | 4c12 heavy chain | 4c12 light chain | mus musculus | mus musculus | J | protein | glycoprotein 42 | epstein-barr virus | 46 | 21 | 0.84 | HL | train |
8too_G_F | 8too | crystal structure of epstein-barr virus gp42 in complex with antibody 4c12 | no | immune system | 2023-08-03 | 2024-03-27 | x-ray diffraction | 2.6 | 0.275 | 0.226 | 38479361 | 10.1016/j.immuni.2024.02.008 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | G | F | EVQLQQSGPELVKPGASVKISCKASGYTFTDYNMHWVKQSHGKNLEWIGFIYLYNGGTGYNQNFKSKATLTVDNSSSTAYMELRSLTSEDSAVFYCARDYYGNPYAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQGP | DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLRSGVPSRFSGSGSGTDYSLTINNLEQEDIATYFCQQGNTLPFTFGSGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLQQSGPELVKPGASVKISCKASGYTFTDYNMHWVKQSHGKNLEWIGFIYLYNGGTGYNQNFKSKATLTVDNSSSTAYMELRSLTSEDSAVFYCARDYYGNPYAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLRSGVPSRFSGSGSGTDYSLTINNLEQEDIATYFCQQGNTLPFTFGSGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 21.477886 | 23.350925 | 234 | 214 | 220 | 211 | 220 | 211 | 100 | 4c12 heavy chain | 4c12 light chain | mus musculus | mus musculus | K | protein | glycoprotein 42 | epstein-barr virus | 48 | 21 | 0.81 | HL | train |
8too_H_E | 8too | crystal structure of epstein-barr virus gp42 in complex with antibody 4c12 | no | immune system | 2023-08-03 | 2024-03-27 | x-ray diffraction | 2.6 | 0.275 | 0.226 | 38479361 | 10.1016/j.immuni.2024.02.008 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | E | EVQLQQSGPELVKPGASVKISCKASGYTFTDYNMHWVKQSHGKNLEWIGFIYLYNGGTGYNQNFKSKATLTVDNSSSTAYMELRSLTSEDSAVFYCARDYYGNPYAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQGP | DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLRSGVPSRFSGSGSGTDYSLTINNLEQEDIATYFCQQGNTLPFTFGSGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLQQSGPELVKPGASVKISCKASGYTFTDYNMHWVKQSHGKNLEWIGFIYLYNGGTGYNQNFKSKATLTVDNSSSTAYMELRSLTSEDSAVFYCARDYYGNPYAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLRSGVPSRFSGSGSGTDYSLTINNLEQEDIATYFCQQGNTLPFTFGSGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 21.537664 | 23.412714 | 234 | 214 | 220 | 211 | 220 | 211 | 100 | 4c12 heavy chain | 4c12 light chain | mus musculus | mus musculus | L | protein | glycoprotein 42 | epstein-barr virus | 46 | 20 | 0.83 | HL | train |
8toa_H_L | 8toa | cryoem structure of h7 hemagglutinin from a/shanghai2/2013 h7n9 in complex with a human neutralizing antibody h7.hk2 | no | viral protein/immune system | 2023-08-03 | 2024-05-15 | electron microscopy | 3.69 | N.A. | N.A. | 38802413 | 10.1038/s41467-024-48758-4 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV2 | H | L | QVQLQGSGPGLLRPSETLSLTCSVSGVSINSYYWSWVRQPPGKALEWIGYIYYSGNTNYNPSLESRVTISVDRSKNQFSLKMTSVTAADTARYFCARQGIFGDYGSDYWGPGTLVTVSS | DIVMTQSPLSLPVTPGEPASISCRSNQSLQHSNGYVHLDWYRQKPGQSPHLLIYLGFNRASGVPDRFSGGGSGTDFTLKISRVEAEDVGVYYCMQGLQTPFTFGPGTTVDLK | QVQLQGSGPGLLRPSETLSLTCSVSGVSINSYYWSWVRQPPGKALEWIGYIYYSGNTNYNPSLESRVTISVDRSKNQFSLKMTSVTAADTARYFCARQGIFGDYGSDYWGPGTLVTVSS | DIVMTQSPLSLPVTPGEPASISCRSNQSLQHSNGYVHLDWYRQKPGQSPHLLIYLGFNRASGVPDRFSGGGSGTDFTLKISRVEAEDVGVYYCMQGLQTPFTFGPGTTVDL | 13.883039 | 13.598302 | 119 | 112 | 119 | 111 | 119 | 111 | 45 | h7.hk2 neutralizing antibody heavy chain | h7.hk2 neutralizing antibody light chain | homo sapiens | homo sapiens | C | protein | hemagglutinin | influenza a virus (a/shanghai/02/2013(h7n9)) | 49 | 19 | 0.83 | HL | train |
8toa_A_B | 8toa | cryoem structure of h7 hemagglutinin from a/shanghai2/2013 h7n9 in complex with a human neutralizing antibody h7.hk2 | no | viral protein/immune system | 2023-08-03 | 2024-05-15 | electron microscopy | 3.69 | N.A. | N.A. | 38802413 | 10.1038/s41467-024-48758-4 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV2 | A | B | QVQLQGSGPGLLRPSETLSLTCSVSGVSINSYYWSWVRQPPGKALEWIGYIYYSGNTNYNPSLESRVTISVDRSKNQFSLKMTSVTAADTARYFCARQGIFGDYGSDYWGPGTLVTVSS | DIVMTQSPLSLPVTPGEPASISCRSNQSLQHSNGYVHLDWYRQKPGQSPHLLIYLGFNRASGVPDRFSGGGSGTDFTLKISRVEAEDVGVYYCMQGLQTPFTFGPGTTVDLK | QVQLQGSGPGLLRPSETLSLTCSVSGVSINSYYWSWVRQPPGKALEWIGYIYYSGNTNYNPSLESRVTISVDRSKNQFSLKMTSVTAADTARYFCARQGIFGDYGSDYWGPGTLVTVSS | DIVMTQSPLSLPVTPGEPASISCRSNQSLQHSNGYVHLDWYRQKPGQSPHLLIYLGFNRASGVPDRFSGGGSGTDFTLKISRVEAEDVGVYYCMQGLQTPFTFGPGTTVDL | 13.769055 | 13.326748 | 119 | 112 | 119 | 111 | 119 | 111 | 47 | h7.hk2 neutralizing antibody heavy chain | h7.hk2 neutralizing antibody light chain | homo sapiens | homo sapiens | I | protein | hemagglutinin | influenza a virus (a/shanghai/02/2013(h7n9)) | 50 | 19 | 0.79 | HL | train |
8toa_D_E | 8toa | cryoem structure of h7 hemagglutinin from a/shanghai2/2013 h7n9 in complex with a human neutralizing antibody h7.hk2 | no | viral protein/immune system | 2023-08-03 | 2024-05-15 | electron microscopy | 3.69 | N.A. | N.A. | 38802413 | 10.1038/s41467-024-48758-4 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV2 | D | E | QVQLQGSGPGLLRPSETLSLTCSVSGVSINSYYWSWVRQPPGKALEWIGYIYYSGNTNYNPSLESRVTISVDRSKNQFSLKMTSVTAADTARYFCARQGIFGDYGSDYWGPGTLVTVSS | DIVMTQSPLSLPVTPGEPASISCRSNQSLQHSNGYVHLDWYRQKPGQSPHLLIYLGFNRASGVPDRFSGGGSGTDFTLKISRVEAEDVGVYYCMQGLQTPFTFGPGTTVDLK | QVQLQGSGPGLLRPSETLSLTCSVSGVSINSYYWSWVRQPPGKALEWIGYIYYSGNTNYNPSLESRVTISVDRSKNQFSLKMTSVTAADTARYFCARQGIFGDYGSDYWGPGTLVTVSS | DIVMTQSPLSLPVTPGEPASISCRSNQSLQHSNGYVHLDWYRQKPGQSPHLLIYLGFNRASGVPDRFSGGGSGTDFTLKISRVEAEDVGVYYCMQGLQTPFTFGPGTTVDL | 13.888807 | 13.598296 | 119 | 112 | 119 | 111 | 119 | 111 | 45 | h7.hk2 neutralizing antibody heavy chain | h7.hk2 neutralizing antibody light chain | homo sapiens | homo sapiens | K | protein | hemagglutinin | influenza a virus (a/shanghai/02/2013(h7n9)) | 52 | 19 | 0.79 | HL | train |
8to7_G_J | 8to7 | cryo-em structure of herh-b*01 fab in complex with hiv-1 env trimer bg505.ds sosip | no | viral protein/immune system | 2023-08-03 | 2024-08-07 | electron microscopy | 3.39 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV2 | G | J | QVQLQESGPGLVKPSETLSLTCGVSGDSITRNYYYWHWIRQSPGKGLEGLGYIAYTGGTDYSPSFKSRVTISRDTSKNQFSLKLTSVTVADTAVYFCARERGDSYIYSYDGVDFWGQGLLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQGP | DAVLTQSPLSLPITPGEPASISCRSSQSLLHTNGETYLNWYQQKTGQRPRLLISQVSKREIGVPDRFSASGAGSDFTLKISRVEAEDVGLYFCGQGLHWPRTFGQGTRVDIKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSETLSLTCGVSGDSITRNYYYWHWIRQSPGKGLEGLGYIAYTGGTDYSPSFKSRVTISRDTSKNQFSLKLTSVTVADTAVYFCARERGDSYIYSYDGVDFWGQGLLVTVSS | DAVLTQSPLSLPITPGEPASISCRSSQSLLHTNGETYLNWYQQKTGQRPRLLISQVSKREIGVPDRFSASGAGSDFTLKISRVEAEDVGLYFCGQGLHWPRTFGQGTRVDIK | 14.881719 | 14.010904 | 238 | 219 | 125 | 112 | 125 | 112 | 43 | herh-b*01 heavy chain | herh-b*01 light chain | macaca mulatta | macaca mulatta | A;B | protein;protein | transmembrane protein gp41;transmembrane protein gp41 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 41;19 | 24;8 | 0.92;0.89 | HL | train |
8to7_H_L | 8to7 | cryo-em structure of herh-b*01 fab in complex with hiv-1 env trimer bg505.ds sosip | no | viral protein/immune system | 2023-08-03 | 2024-08-07 | electron microscopy | 3.39 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV2 | H | L | QVQLQESGPGLVKPSETLSLTCGVSGDSITRNYYYWHWIRQSPGKGLEGLGYIAYTGGTDYSPSFKSRVTISRDTSKNQFSLKLTSVTVADTAVYFCARERGDSYIYSYDGVDFWGQGLLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQGP | DAVLTQSPLSLPITPGEPASISCRSSQSLLHTNGETYLNWYQQKTGQRPRLLISQVSKREIGVPDRFSASGAGSDFTLKISRVEAEDVGLYFCGQGLHWPRTFGQGTRVDIKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSETLSLTCGVSGDSITRNYYYWHWIRQSPGKGLEGLGYIAYTGGTDYSPSFKSRVTISRDTSKNQFSLKLTSVTVADTAVYFCARERGDSYIYSYDGVDFWGQGLLVTVSS | DAVLTQSPLSLPITPGEPASISCRSSQSLLHTNGETYLNWYQQKTGQRPRLLISQVSKREIGVPDRFSASGAGSDFTLKISRVEAEDVGLYFCGQGLHWPRTFGQGTRVDIK | 14.870399 | 13.992236 | 238 | 219 | 125 | 112 | 125 | 112 | 45 | herh-b*01 heavy chain | herh-b*01 light chain | macaca mulatta | macaca mulatta | E;B;C | protein;protein;protein | surface protein gp120;transmembrane protein gp41;transmembrane protein gp41 | human immunodeficiency virus 1;human immunodeficiency virus 1;human immunodeficiency virus 1 | 12;43;17 | 5;24;7 | 0.83;0.89;0.88 | HL | train |
8to7_I_K | 8to7 | cryo-em structure of herh-b*01 fab in complex with hiv-1 env trimer bg505.ds sosip | no | viral protein/immune system | 2023-08-03 | 2024-08-07 | electron microscopy | 3.39 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV2 | I | K | QVQLQESGPGLVKPSETLSLTCGVSGDSITRNYYYWHWIRQSPGKGLEGLGYIAYTGGTDYSPSFKSRVTISRDTSKNQFSLKLTSVTVADTAVYFCARERGDSYIYSYDGVDFWGQGLLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQGP | DAVLTQSPLSLPITPGEPASISCRSSQSLLHTNGETYLNWYQQKTGQRPRLLISQVSKREIGVPDRFSASGAGSDFTLKISRVEAEDVGLYFCGQGLHWPRTFGQGTRVDIKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSETLSLTCGVSGDSITRNYYYWHWIRQSPGKGLEGLGYIAYTGGTDYSPSFKSRVTISRDTSKNQFSLKLTSVTVADTAVYFCARERGDSYIYSYDGVDFWGQGLLVTVSS | DAVLTQSPLSLPITPGEPASISCRSSQSLLHTNGETYLNWYQQKTGQRPRLLISQVSKREIGVPDRFSASGAGSDFTLKISRVEAEDVGLYFCGQGLHWPRTFGQGTRVDIK | 14.850347 | 13.994465 | 238 | 219 | 125 | 112 | 125 | 112 | 51 | herh-b*01 heavy chain | herh-b*01 light chain | macaca mulatta | macaca mulatta | F;A;C | protein;protein;protein | surface protein gp120;transmembrane protein gp41;transmembrane protein gp41 | human immunodeficiency virus 1;human immunodeficiency virus 1;human immunodeficiency virus 1 | 12;19;42 | 5;8;24 | 0.83;0.8;0.89 | HL | train |
8to9_D_F | 8to9 | cryo-em structure of trnm-f*01 fab in complex with hiv-1 env trimer conc sosip | no | viral protein/immune system | 2023-08-03 | 2024-08-07 | electron microscopy | 4.03 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | D | F | QVQLQESGPGVVKPSETLSLTCAVSGDSIKSAYQYWNWIRQPRGKGPEWIGGVYSSSDSTAYNPSLESRVSISRDTSNNRFSLNLRSVTATDTATYFCARSVRDSRGWGRYFLDTWGQGLLVTVSS | DIQMTQSPSSLSASVGDTVTITCRASQSISTWLAWYQQKPGKAPKVLIYSASILQSGVPSRFRGSGSGSDFTLTIGSLQIEDFATYFCQQYTGSPFTFGGGTKVEIK | QVQLQESGPGVVKPSETLSLTCAVSGDSIKSAYQYWNWIRQPRGKGPEWIGGVYSSSDSTAYNPSLESRVSISRDTSNNRFSLNLRSVTATDTATYFCARSVRDSRGWGRYFLDTWGQGLLVTVSS | DIQMTQSPSSLSASVGDTVTITCRASQSISTWLAWYQQKPGKAPKVLIYSASILQSGVPSRFRGSGSGSDFTLTIGSLQIEDFATYFCQQYTGSPFTFGGGTKVEIK | 14.543676 | 13.392571 | 126 | 107 | 126 | 107 | 126 | 107 | 46 | trnm-f*01 heavy chain | trnm-f*01 light chain | macaca mulatta | macaca mulatta | A | protein | envelope glycoprotein gp120 | homo sapiens | 53 | 19 | 0.79 | HL | train |
8to9_E_G | 8to9 | cryo-em structure of trnm-f*01 fab in complex with hiv-1 env trimer conc sosip | no | viral protein/immune system | 2023-08-03 | 2024-08-07 | electron microscopy | 4.03 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | E | G | QVQLQESGPGVVKPSETLSLTCAVSGDSIKSAYQYWNWIRQPRGKGPEWIGGVYSSSDSTAYNPSLESRVSISRDTSNNRFSLNLRSVTATDTATYFCARSVRDSRGWGRYFLDTWGQGLLVTVSS | DIQMTQSPSSLSASVGDTVTITCRASQSISTWLAWYQQKPGKAPKVLIYSASILQSGVPSRFRGSGSGSDFTLTIGSLQIEDFATYFCQQYTGSPFTFGGGTKVEIK | QVQLQESGPGVVKPSETLSLTCAVSGDSIKSAYQYWNWIRQPRGKGPEWIGGVYSSSDSTAYNPSLESRVSISRDTSNNRFSLNLRSVTATDTATYFCARSVRDSRGWGRYFLDTWGQGLLVTVSS | DIQMTQSPSSLSASVGDTVTITCRASQSISTWLAWYQQKPGKAPKVLIYSASILQSGVPSRFRGSGSGSDFTLTIGSLQIEDFATYFCQQYTGSPFTFGGGTKVEIK | 14.565946 | 13.439477 | 126 | 107 | 126 | 107 | 126 | 107 | 48 | trnm-f*01 heavy chain | trnm-f*01 light chain | macaca mulatta | macaca mulatta | B | protein | envelope glycoprotein gp120 | homo sapiens | 51 | 18 | 0.82 | HL | train |
8to9_H_L | 8to9 | cryo-em structure of trnm-f*01 fab in complex with hiv-1 env trimer conc sosip | no | viral protein/immune system | 2023-08-03 | 2024-08-07 | electron microscopy | 4.03 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | H | L | QVQLQESGPGVVKPSETLSLTCAVSGDSIKSAYQYWNWIRQPRGKGPEWIGGVYSSSDSTAYNPSLESRVSISRDTSNNRFSLNLRSVTATDTATYFCARSVRDSRGWGRYFLDTWGQGLLVTVSS | DIQMTQSPSSLSASVGDTVTITCRASQSISTWLAWYQQKPGKAPKVLIYSASILQSGVPSRFRGSGSGSDFTLTIGSLQIEDFATYFCQQYTGSPFTFGGGTKVEIK | QVQLQESGPGVVKPSETLSLTCAVSGDSIKSAYQYWNWIRQPRGKGPEWIGGVYSSSDSTAYNPSLESRVSISRDTSNNRFSLNLRSVTATDTATYFCARSVRDSRGWGRYFLDTWGQGLLVTVSS | DIQMTQSPSSLSASVGDTVTITCRASQSISTWLAWYQQKPGKAPKVLIYSASILQSGVPSRFRGSGSGSDFTLTIGSLQIEDFATYFCQQYTGSPFTFGGGTKVEIK | 14.575655 | 13.44558 | 126 | 107 | 126 | 107 | 126 | 107 | 51 | trnm-f*01 heavy chain | trnm-f*01 light chain | macaca mulatta | macaca mulatta | C | protein | envelope glycoprotein gp120 | homo sapiens | 53 | 19 | 0.76 | HL | train |
8top_H_L | 8top | cryo-em structure of hiv-1 env bg505 ds-sosip in complex with antibody gpz6-b.01 targeting the fusion peptide | no | viral protein/immune system | 2023-08-03 | 2024-08-07 | electron microscopy | 3.52 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | H | L | QVQLQESGPGLVKPSETLSLTCAVYGSSISGGYFYWHWIRQAPGKGLEWIGDVYFSGTTGYNPSLKRRVRISADTSKNQFSLNLRSVTAADTAVYFCARDPRGGGWVPNRFDVWGAGVLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQGP | DIQMTQSPSSLSASVGDRVTITCRASQDISSFLNWYQQKPGKAPKLLISSVNRLESGVPSRFSGSGSGTEFTLTVSSLQPEDFATYSCQQCGSVPYTFGQGTTLEIKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSETLSLTCAVYGSSISGGYFYWHWIRQAPGKGLEWIGDVYFSGTTGYNPSLKRRVRISADTSKNQFSLNLRSVTAADTAVYFCARDPRGGGWVPNRFDVWGAGVLVTV | DIQMTQSPSSLSASVGDRVTITCRASQDISSFLNWYQQKPGKAPKLLISSVNRLESGVPSRFSGSGSGTEFTLTVSSLQPEDFATYSCQQCGSVPYTFGQGTTL | 13.878144 | 12.897276 | 237 | 214 | 122 | 104 | 122 | 104 | 43 | heavy chain of antibody gpz6-b.01 | light chain of antibody gpz6-b.01 | macaca mulatta | macaca mulatta | A;B | protein;protein | hiv-1 bg505 ds-sosip gp120;hiv-1 bg505 ds-sosip glycoprotein gp41 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 17;24 | 8;9 | 0.8;0.9 | HL | train |
8top_J_K | 8top | cryo-em structure of hiv-1 env bg505 ds-sosip in complex with antibody gpz6-b.01 targeting the fusion peptide | no | viral protein/immune system | 2023-08-03 | 2024-08-07 | electron microscopy | 3.52 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | J | K | QVQLQESGPGLVKPSETLSLTCAVYGSSISGGYFYWHWIRQAPGKGLEWIGDVYFSGTTGYNPSLKRRVRISADTSKNQFSLNLRSVTAADTAVYFCARDPRGGGWVPNRFDVWGAGVLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQGP | DIQMTQSPSSLSASVGDRVTITCRASQDISSFLNWYQQKPGKAPKLLISSVNRLESGVPSRFSGSGSGTEFTLTVSSLQPEDFATYSCQQCGSVPYTFGQGTTLEIKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSETLSLTCAVYGSSISGGYFYWHWIRQAPGKGLEWIGDVYFSGTTGYNPSLKRRVRISADTSKNQFSLNLRSVTAADTAVYFCARDPRGGGWVPNRFDVWGAGVLVTV | DIQMTQSPSSLSASVGDRVTITCRASQDISSFLNWYQQKPGKAPKLLISSVNRLESGVPSRFSGSGSGTEFTLTVSSLQPEDFATYSCQQCGSVPYTFGQGTTL | 13.875922 | 12.885135 | 237 | 214 | 122 | 104 | 122 | 104 | 41 | heavy chain of antibody gpz6-b.01 | light chain of antibody gpz6-b.01 | macaca mulatta | macaca mulatta | C;D | protein;protein | hiv-1 bg505 ds-sosip gp120;hiv-1 bg505 ds-sosip glycoprotein gp41 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 17;24 | 7;9 | 0.7;0.82 | HL | train |
8top_M_N | 8top | cryo-em structure of hiv-1 env bg505 ds-sosip in complex with antibody gpz6-b.01 targeting the fusion peptide | no | viral protein/immune system | 2023-08-03 | 2024-08-07 | electron microscopy | 3.52 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | M | N | QVQLQESGPGLVKPSETLSLTCAVYGSSISGGYFYWHWIRQAPGKGLEWIGDVYFSGTTGYNPSLKRRVRISADTSKNQFSLNLRSVTAADTAVYFCARDPRGGGWVPNRFDVWGAGVLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQGP | DIQMTQSPSSLSASVGDRVTITCRASQDISSFLNWYQQKPGKAPKLLISSVNRLESGVPSRFSGSGSGTEFTLTVSSLQPEDFATYSCQQCGSVPYTFGQGTTLEIKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSETLSLTCAVYGSSISGGYFYWHWIRQAPGKGLEWIGDVYFSGTTGYNPSLKRRVRISADTSKNQFSLNLRSVTAADTAVYFCARDPRGGGWVPNRFDVWGAGVLVTV | DIQMTQSPSSLSASVGDRVTITCRASQDISSFLNWYQQKPGKAPKLLISSVNRLESGVPSRFSGSGSGTEFTLTVSSLQPEDFATYSCQQCGSVPYTFGQGTTL | 13.873188 | 12.885952 | 237 | 214 | 122 | 104 | 122 | 104 | 44 | heavy chain of antibody gpz6-b.01 | light chain of antibody gpz6-b.01 | macaca mulatta | macaca mulatta | E;F | protein;protein | hiv-1 bg505 ds-sosip gp120;hiv-1 bg505 ds-sosip glycoprotein gp41 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 19;26 | 8;9 | 0.73;0.82 | HL | train |
8top_U_V | 8top | cryo-em structure of hiv-1 env bg505 ds-sosip in complex with antibody gpz6-b.01 targeting the fusion peptide | no | viral protein/immune system | 2023-08-03 | 2024-08-07 | electron microscopy | 3.52 | N.A. | N.A. | 39471811 | 10.1016/j.cell.2024.10.003 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | U | V | QVQLQESGPGLVKPSETLSLTCAVYGSSISGGYFYWHWIRQAPGKGLEWIGDVYFSGTTGYNPSLKRRVRISADTSKNQFSLNLRSVTAADTAVYFCARDPRGGGWVPNRFDVWGAGVLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQGP | DIQMTQSPSSLSASVGDRVTITCRASQDISSFLNWYQQKPGKAPKLLISSVNRLESGVPSRFSGSGSGTEFTLTVSSLQPEDFATYSCQQCGSVPYTFGQGTTLEIKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSETLSLTCAVYGSSISGGYFYWHWIRQAPGKGLEWIGDVYFSGTTGYNPSLKRRVRISADTSKNQFSLNLRSVTAADTAVYFCARDPRGGGWVPNRFDVWGAGVLVTV | DIQMTQSPSSLSASVGDRVTITCRASQDISSFLNWYQQKPGKAPKLLISSVNRLESGVPSRFSGSGSGTEFTLTVSSLQPEDFATYSCQQCGSVPYTFGQGTTL | 13.855336 | 12.877313 | 237 | 214 | 122 | 104 | 122 | 104 | 44 | heavy chain of antibody gpz6-b.01 | light chain of antibody gpz6-b.01 | macaca mulatta | macaca mulatta | O;P | protein;protein | hiv-1 bg505 ds-sosip gp120;hiv-1 bg505 ds-sosip glycoprotein gp41 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 15;24 | 7;9 | 0.78;0.82 | HL | train |
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