PDB_ID_chain
stringlengths
6
10
PDB_ID
stringlengths
4
4
Title
stringlengths
4
230
Mutation(s)
stringclasses
2 values
Classification
stringclasses
305 values
Deposit_date
stringdate
1976-03-17 00:00:00
2026-01-20 00:00:00
Release_date
stringdate
1976-05-19 00:00:00
2026-02-25 00:00:00
Method
stringclasses
5 values
Resolution
stringclasses
459 values
R_free
stringclasses
227 values
R_work
stringclasses
211 values
PMID
stringlengths
4
8
DOI
stringlengths
4
68
Model_index
int64
0
76
Asym_ID_type
stringclasses
2 values
Ab_type
stringclasses
30 values
H_subgroup
stringclasses
8 values
L_subgroup
stringclasses
19 values
H_chain_ID
stringclasses
60 values
L_chain_ID
stringclasses
58 values
H_fas_seq
stringlengths
4
919
L_fas_seq
stringlengths
4
627
H_filled_pdb_seq
stringlengths
4
896
L_filled_pdb_seq
stringlengths
4
523
H_mean_radius
float64
0
79.7
L_mean_radius
float64
0
84.3
H_fas_seq_len
int64
0
919
L_fas_seq_len
int64
0
627
H_pdb_seq_len
int64
0
879
L_pdb_seq_len
int64
0
523
H_filled_seq_len
int64
0
896
L_filled_seq_len
int64
0
523
HL_inf_res_num
int64
0
175
H_mol_name
stringlengths
2
331
L_mol_name
stringlengths
2
151
H_species
stringclasses
68 values
L_species
stringclasses
42 values
Ag_chain_ID(s)
stringclasses
279 values
Ag_type(s)
stringclasses
16 values
Ag_mol_name(s)
stringlengths
2
390
Ag_species
stringclasses
743 values
Ab_ag_inf_res_num
stringlengths
1
11
CDR_inf_res_num
stringclasses
444 values
CDR_inf_res_ratio
stringlengths
1
19
hl_label
stringclasses
3 values
split
stringclasses
1 value
8uls_J_N
8uls
cryo-em structure of the bg505 sosipv2 in complex with bnab 01_d03 fabs
yes
viral protein/immune system
2023-10-16
2025-04-16
electron microscopy
3.2
N.A.
N.A.
41053396
10.1038/s41590-025-02286-5
0
auth_asym_id
VH:VL
IGHV1
IGKV1
J
N
HVQLWQSGAEVKKPGASVKISCSAWGFGTTSGYSFRDYRVHWVRHIAGQGFQWMGHMQPRYGAVNYARQFQGRITMTREVSFDASGGTAYMELRSLRSDDTAVYYCVTHKLYDGEDASDLTWRLDPWGQGTRVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
GVHLTQSPASLSASVGDRVTFTCQASQDITNAINWYQLRPGKTPKLMIHDGSTLRRGVPSRFAGSGFGTKFTFTIDNLQPEDLATYFCQHYEFFPPVGTQVELNRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
HVQLWQSGAEVKKPGASVKISCSAWGFGTTSGYSFRDYRVHWVRHIAGQGFQWMGHMQPRYGAVNYARQFQGRITMTREVSFDASGGTAYMELRSLRSDDTAVYYCVTHKLYDGEDASDLTWRLDPWGQGTRVIVSS
GVHLTQSPASLSASVGDRVTFTCQASQDITNAINWYQLRPGKTPKLMIHDGSTLRRGVPSRFAGSGFGTKFTFTIDNLQPEDLATYFCQHYEFFPPVGTQVELN
14.816404
12.92517
249
211
137
104
137
104
39
01_d03 fab heavy chain
01_d03 fab light chain
homo sapiens
homo sapiens
C;E
protein;protein
envelope glycoprotein gp160;envelope glycoprotein gp160
human immunodeficiency virus 1;human immunodeficiency virus 1
62;19
17;9
0.57;0.82
HL
train
8ult_I_M
8ult
cryo-em structure of the bg505 sosipv2 in complex with bnab 04_a06 fabs
yes
viral protein/immune system
2023-10-16
2025-04-16
electron microscopy
3.8
N.A.
N.A.
41053396
10.1038/s41590-025-02286-5
0
auth_asym_id
VH:VL
IGHV1
IGKV1
I
M
SVRLDQSGTAVKKPGASVRVSCRAPDSFTVYRPRLSAYFIGEFNIHWLRQAPGQGLEWLGFVNIFRGAVKYSSRFQGRITITRDTSSETSYLDLGALKADDTATYYCAWDKNVDDNPWRLDSWGQGTLVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
YIQVTQSPSSLSASIGDTITVACEVSQDVGWAVNWYHQRPGRPPYNLIYTAHNLAPGVASRFRGSRVGTYFTLTINNLLPEDVGTYYCQVFDSFAPGGTRVDLRGTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VRLDQSGTAVKKPGASVRVSCRAPDSFTVYRPRLSAYFIGEFNIHWLRQAPGQGLEWLGFVNIFRGAVKYSSRFQGRITITRDTSSETSYLDLGALKADDTATYYCAWDKNVDDNPWRLDSWGQGTLVIVSS
IQVTQSPSSLSASIGDTITVACEVSQDVGWAVNWYHQRPGRPPYNLIYTAHNLAPGVASRFRGSRVGTYFTLTINNLLPEDVGTYYCQVFDSFAPGGTRVDLR
15.471167
12.920624
245
211
132
103
132
103
39
04_a06 fab heavy chain
04_a06 fab light chain
homo sapiens
homo sapiens
A
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
75
23
0.7
HL
train
8ult_J_N
8ult
cryo-em structure of the bg505 sosipv2 in complex with bnab 04_a06 fabs
yes
viral protein/immune system
2023-10-16
2025-04-16
electron microscopy
3.8
N.A.
N.A.
41053396
10.1038/s41590-025-02286-5
0
auth_asym_id
VH:VL
IGHV1
IGKV1
J
N
SVRLDQSGTAVKKPGASVRVSCRAPDSFTVYRPRLSAYFIGEFNIHWLRQAPGQGLEWLGFVNIFRGAVKYSSRFQGRITITRDTSSETSYLDLGALKADDTATYYCAWDKNVDDNPWRLDSWGQGTLVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
YIQVTQSPSSLSASIGDTITVACEVSQDVGWAVNWYHQRPGRPPYNLIYTAHNLAPGVASRFRGSRVGTYFTLTINNLLPEDVGTYYCQVFDSFAPGGTRVDLRGTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VRLDQSGTAVKKPGASVRVSCRAPDSFTVYRPRLSAYFIGEFNIHWLRQAPGQGLEWLGFVNIFRGAVKYSSRFQGRITITRDTSSETSYLDLGALKADDTATYYCAWDKNVDDNPWRLDSWGQGTLVIVSS
IQVTQSPSSLSASIGDTITVACEVSQDVGWAVNWYHQRPGRPPYNLIYTAHNLAPGVASRFRGSRVGTYFTLTINNLLPEDVGTYYCQVFDSFAPGGTRVDLR
15.494766
12.892395
245
211
132
103
132
103
40
04_a06 fab heavy chain
04_a06 fab light chain
homo sapiens
homo sapiens
C;E
protein;protein
envelope glycoprotein gp120;envelope glycoprotein gp120
human immunodeficiency virus 1;human immunodeficiency virus 1
73;10
23;5
0.7;1.0
HL
train
8ult_H_L
8ult
cryo-em structure of the bg505 sosipv2 in complex with bnab 04_a06 fabs
yes
viral protein/immune system
2023-10-16
2025-04-16
electron microscopy
3.8
N.A.
N.A.
41053396
10.1038/s41590-025-02286-5
0
auth_asym_id
VH:VL
IGHV1
IGKV1
H
L
SVRLDQSGTAVKKPGASVRVSCRAPDSFTVYRPRLSAYFIGEFNIHWLRQAPGQGLEWLGFVNIFRGAVKYSSRFQGRITITRDTSSETSYLDLGALKADDTATYYCAWDKNVDDNPWRLDSWGQGTLVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
YIQVTQSPSSLSASIGDTITVACEVSQDVGWAVNWYHQRPGRPPYNLIYTAHNLAPGVASRFRGSRVGTYFTLTINNLLPEDVGTYYCQVFDSFAPGGTRVDLRGTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VRLDQSGTAVKKPGASVRVSCRAPDSFTVYRPRLSAYFIGEFNIHWLRQAPGQGLEWLGFVNIFRGAVKYSSRFQGRITITRDTSSETSYLDLGALKADDTATYYCAWDKNVDDNPWRLDSWGQGTLVIVSS
IQVTQSPSSLSASIGDTITVACEVSQDVGWAVNWYHQRPGRPPYNLIYTAHNLAPGVASRFRGSRVGTYFTLTINNLLPEDVGTYYCQVFDSFAPGGTRVDLR
15.49659
12.891505
245
211
132
103
132
103
39
04_a06 fab heavy chain
04_a06 fab light chain
homo sapiens
homo sapiens
E
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
72
21
0.64
HL
train
8ulu_H_L
8ulu
cryo-em structure of the bg505 sosipv2 in complex with bnab 04_a06 and pgdm1400 fabs
yes
viral protein/immune system
2023-10-16
2025-04-16
electron microscopy
3.8
N.A.
N.A.
41053396
10.1038/s41590-025-02286-5
0
auth_asym_id
VH:VL
IGHV1
IGKV1
H
L
SVRLDQSGTAVKKPGASVRVSCRAPDSFTVYRPRLSAYFIGEFNIHWLRQAPGQGLEWLGFVNIFRGAVKYSSRFQGRITITRDTSSETSYLDLGALKADDTATYYCAWDKNVDDNPWRLDSWGQGTLVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
YIQVTQSPSSLSASIGDTITVACEVSQDVGWAVNWYHQRPGRPPYNLIYTAHNLAPGVASRFRGSRVGTYFTLTINNLLPEDVGTYYCQVFDSFAPGGTRVDLRGTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VRLDQSGTAVKKPGASVRVSCRAPDSFTVYRPRLSAYFIGEFNIHWLRQAPGQGLEWLGFVNIFRGAVKYSSRFQGRITITRDTSSETSYLDLGALKADDTATYYCAWDKNVDDNPWRLDSWGQGTLVIVSS
IQVTQSPSSLSASIGDTITVACEVSQDVGWAVNWYHQRPGRPPYNLIYTAHNLAPGVASRFRGSRVGTYFTLTINNLLPEDVGTYYCQVFDSFAPGGTRVDLR
15.554141
12.97059
245
211
132
103
132
103
36
04_a06 fab heavy chain
04_a06 fab light chain
homo sapiens
homo sapiens
A
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
72
23
0.68
HL
train
8ulu_I_M
8ulu
cryo-em structure of the bg505 sosipv2 in complex with bnab 04_a06 and pgdm1400 fabs
yes
viral protein/immune system
2023-10-16
2025-04-16
electron microscopy
3.8
N.A.
N.A.
41053396
10.1038/s41590-025-02286-5
0
auth_asym_id
VH:VL
IGHV1
IGKV1
I
M
SVRLDQSGTAVKKPGASVRVSCRAPDSFTVYRPRLSAYFIGEFNIHWLRQAPGQGLEWLGFVNIFRGAVKYSSRFQGRITITRDTSSETSYLDLGALKADDTATYYCAWDKNVDDNPWRLDSWGQGTLVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
YIQVTQSPSSLSASIGDTITVACEVSQDVGWAVNWYHQRPGRPPYNLIYTAHNLAPGVASRFRGSRVGTYFTLTINNLLPEDVGTYYCQVFDSFAPGGTRVDLRGTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VRLDQSGTAVKKPGASVRVSCRAPDSFTVYRPRLSAYFIGEFNIHWLRQAPGQGLEWLGFVNIFRGAVKYSSRFQGRITITRDTSSETSYLDLGALKADDTATYYCAWDKNVDDNPWRLDSWGQGTLVIVSS
IQVTQSPSSLSASIGDTITVACEVSQDVGWAVNWYHQRPGRPPYNLIYTAHNLAPGVASRFRGSRVGTYFTLTINNLLPEDVGTYYCQVFDSFAPGGTRVDLR
15.543001
12.965944
245
211
132
103
132
103
40
04_a06 fab heavy chain
04_a06 fab light chain
homo sapiens
homo sapiens
A;E
protein;protein
envelope glycoprotein gp120;envelope glycoprotein gp120
human immunodeficiency virus 1;human immunodeficiency virus 1
11;74
5;20
1.0;0.65
HL
train
8ulu_J_N
8ulu
cryo-em structure of the bg505 sosipv2 in complex with bnab 04_a06 and pgdm1400 fabs
yes
viral protein/immune system
2023-10-16
2025-04-16
electron microscopy
3.8
N.A.
N.A.
41053396
10.1038/s41590-025-02286-5
0
auth_asym_id
VH:VL
IGHV1
IGKV1
J
N
SVRLDQSGTAVKKPGASVRVSCRAPDSFTVYRPRLSAYFIGEFNIHWLRQAPGQGLEWLGFVNIFRGAVKYSSRFQGRITITRDTSSETSYLDLGALKADDTATYYCAWDKNVDDNPWRLDSWGQGTLVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
YIQVTQSPSSLSASIGDTITVACEVSQDVGWAVNWYHQRPGRPPYNLIYTAHNLAPGVASRFRGSRVGTYFTLTINNLLPEDVGTYYCQVFDSFAPGGTRVDLRGTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VRLDQSGTAVKKPGASVRVSCRAPDSFTVYRPRLSAYFIGEFNIHWLRQAPGQGLEWLGFVNIFRGAVKYSSRFQGRITITRDTSSETSYLDLGALKADDTATYYCAWDKNVDDNPWRLDSWGQGTLVIVSS
IQVTQSPSSLSASIGDTITVACEVSQDVGWAVNWYHQRPGRPPYNLIYTAHNLAPGVASRFRGSRVGTYFTLTINNLLPEDVGTYYCQVFDSFAPGGTRVDLR
15.564602
12.96534
245
211
132
103
132
103
42
04_a06 fab heavy chain
04_a06 fab light chain
homo sapiens
homo sapiens
C
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
73
22
0.65
HL
train
8ulu_K_G
8ulu
cryo-em structure of the bg505 sosipv2 in complex with bnab 04_a06 and pgdm1400 fabs
yes
viral protein/immune system
2023-10-16
2025-04-16
electron microscopy
3.8
N.A.
N.A.
41053396
10.1038/s41590-025-02286-5
0
auth_asym_id
VH:VL
IGHV1
IGKV2
K
G
QAQLVQSGPEVRKPGTSVKVSCKAPGNTLKTYDLHWVRSVPGQGLQWMGWISHEGDKKVIVERFKAKVTIDWDRSTNTAYLQLSGLTSGDTAVYYCAKGSKHRLRDYALYDDDGALNWAVDVDYLSNLEFWGQGTAVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
DFVLTQSPHSLSVTPGESASISCKSSHSLIHGDRNNYLAWYVQKPGRSPQLLIYLASSRASGVPDRFSGSGSDKDFTLKISRVETEDVGTYYCMQGRESPWTFGQGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QLVQSGPEVRKPGTSVKVSCKAPGNTLKTYDLHWVRSVPGQGLQWMGWISHEGDKKVIVERFKAKVTIDWDRSTNTAYLQLSGLTSGDTAVYYCAKGSKHRLRDYALYDDDGALNWAVDVDYLSNLEFWGQGTAVTVSS
VLTQSPHSLSVTPGESASISCKSSHSLIHGDRNNYLAWYVQKPGRSPQLLIYLASSRASGVPDRFSGSGSDKDFTLKISRVETEDVGTYYCMQGRESPWTFGQGTKVDIK
17.045946
13.688818
253
219
138
110
139
110
46
pgdm1400 fab heavy chain
pgdm1400 fab light chain
homo sapiens
homo sapiens
C;E
protein;protein
envelope glycoprotein gp120;envelope glycoprotein gp120
human immunodeficiency virus 1;human immunodeficiency virus 1
18;18
9;9
1.0;1.0
HL
train
8wsq_A_B
8wsq
a protective human antibody against respiratory syncytial virus by targeting a prefusion epitope across sites iv and v of the viral fusion glycoprotein.
no
antiviral protein/viral protein
2023-10-17
2023-11-15
x-ray diffraction
2.9
0.28
0.247
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV3
IGLV1
A
B
QVQLVQSGGGVVQPGRSLRLSCAASGFSFTNYGMHWVRQAPGKGLEWVAVISYDDGSDKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCVRDPTGDYGDFPEQDGYYYYYGMDVWGQGTTVTVSS
WVPGSTGDQAVLTQPPSASGTPGQRVTISCSGSSLNIGSNYVYWYQQLPGTAPKFLIYKNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGVVFGGGTKLTVLGQPKAAPSVTLFPP
QVQLVQSGGGVVQPGRSLRLSCAASGFSFTNYGMHWVRQAPGKGLEWVAVISYDDGSDKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCVRDPTGDYGDFPEQDGYYYYYGMDVWGQGTTVTVS
QAVLTQPPSASGTPGQRVTISCSGSSLNIGSNYVYWYQQLPGTAPKFLIYKNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGVVFGGGTKLTVL
14.410271
13.289073
133
132
132
110
132
110
47
rv11-h scfv
rv11-l scfv
homo sapiens
homo sapiens
F
protein
fusion glycoprotein f0
respiratory syncytial virus
44
23
1
HL
train
8wsn_E_F
8wsn
crystal structure of sftsv gn and antibody sf1
no
viral protein/immune system
2023-10-17
2024-06-12
x-ray diffraction
2.8
0.291
0.24
38830098
10.1073/pnas.2400163121
0
auth_asym_id
FabH:FabL
IGHV5
IGKV3
E
F
QVQLVQSGAEVKKPGESLTISCETSRYNFTYHWVGWVRQMPGEGLEWMGIIYPGDSDTRYSPSFQGQITISADKSLSTTYLHWRRLKASDTAIYYCARLKPAWGRGYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
EIVLTQSPATLSVSPGERATLSCRASQSVSSNLAWYQHKPGQAPRLLIYGAFIRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQHYNNWPPNPFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAEVKKPGESLTISCETSRYNFTYHWVGWVRQMPGEGLEWMGIIYPGDSDTRYSPSFQGQITISADKSLSTTYLHWRRLKASDTAIYYCARLKPAWGRGYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
IVLTQSPATLSVSPGERATLSCRASQSVSSNLAWYQHKPGQAPRLLIYGAFIRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQHYNNWPPNPFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
22.579947
22.557407
227
215
214
211
222
211
95
ab1-h
ab1-l
homo sapiens
homo sapiens
A
protein
gn
sfts virus js4
30
12
0.92
HL
train
8wsn_B_C
8wsn
crystal structure of sftsv gn and antibody sf1
no
viral protein/immune system
2023-10-17
2024-06-12
x-ray diffraction
2.8
0.291
0.24
38830098
10.1073/pnas.2400163121
0
auth_asym_id
FabH:FabL
IGHV5
IGKV3
B
C
QVQLVQSGAEVKKPGESLTISCETSRYNFTYHWVGWVRQMPGEGLEWMGIIYPGDSDTRYSPSFQGQITISADKSLSTTYLHWRRLKASDTAIYYCARLKPAWGRGYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
EIVLTQSPATLSVSPGERATLSCRASQSVSSNLAWYQHKPGQAPRLLIYGAFIRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQHYNNWPPNPFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLVQSGAEVKKPGESLTISCETSRYNFTYHWVGWVRQMPGEGLEWMGIIYPGDSDTRYSPSFQGQITISADKSLSTTYLHWRRLKASDTAIYYCARLKPAWGRGYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
EIVLTQSPATLSVSPGERATLSCRASQSVSSNLAWYQHKPGQAPRLLIYGAFIRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQHYNNWPPNPFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
22.709608
22.71867
227
215
215
213
221
213
98
ab1-h
ab1-l
homo sapiens
homo sapiens
D
protein
gn
sfts virus js4
27
12
0.92
HL
train
8wsp_B_C
8wsp
crystal structure of sftsv gn and antibody sf5
no
viral protein/immune system
2023-10-17
2024-06-12
x-ray diffraction
2.51
0.243
0.195
38830098
10.1073/pnas.2400163121
0
auth_asym_id
FabH:FabL
IGHV3
IGLV3
B
C
EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTDFISAGPWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNHVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTDFISAGPWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
SELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNHVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
20.48806
23.987318
228
214
217
210
224
210
94
ab5-h
ab5-l
homo sapiens
homo sapiens
A
protein
gn
sfts virus sd4
64
26
0.72
HL
train
8wsp_E_F
8wsp
crystal structure of sftsv gn and antibody sf5
no
viral protein/immune system
2023-10-17
2024-06-12
x-ray diffraction
2.51
0.243
0.195
38830098
10.1073/pnas.2400163121
0
auth_asym_id
FabH:FabL
IGHV3
IGLV3
E
F
EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTDFISAGPWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
SSELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNHVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTDFISAGPWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
ELTQDPAVSVALGQTVRITCQGDSLRSYYASWYQQKPGQAPVLVIYGKNNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDSSGNHVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
20.342745
23.534412
228
214
212
209
224
209
87
ab5-h
ab5-l
homo sapiens
homo sapiens
D
protein
gn
sfts virus sd4
62
25
0.71
HL
train
8wsu_B_C
8wsu
crystal structure of sftsv gc and antibody
no
viral protein/immune system
2023-10-17
2024-06-12
x-ray diffraction
3.3
0.267
0.207
38830098
10.1073/pnas.2400163121
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
B
C
QVQLVQSGGGVVKTGRSQRVSCATSGFTFSSYAIHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDSSKNTVYLQMNSLRTEDTAVYYCARSQASWQAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
DIQMTQSPSSLSASVGDRVTITCRASQGVGTDLAWYQQKPGKAPNRLIFAASNLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLHHNSFPLAFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGGGVVKTGRSQRVSCATSGFTFSSYAIHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDSSKNTVYLQMNSLRTEDTAVYYCARSQASWQAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
DIQMTQSPSSLSASVGDRVTITCRASQGVGTDLAWYQQKPGKAPNRLIFAASNLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLHHNSFPLAFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
23.107393
22.602276
224
214
224
214
224
214
116
ab-h
ab-l
homo sapiens
homo sapiens
A
protein
glycoprotein c
sfts phlebovirus (isolate sftsv/human/china/hb29/2010)
56
21
0.78
HL
train
8wsu_E_F
8wsu
crystal structure of sftsv gc and antibody
no
viral protein/immune system
2023-10-17
2024-06-12
x-ray diffraction
3.3
0.267
0.207
38830098
10.1073/pnas.2400163121
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
E
F
QVQLVQSGGGVVKTGRSQRVSCATSGFTFSSYAIHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDSSKNTVYLQMNSLRTEDTAVYYCARSQASWQAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
DIQMTQSPSSLSASVGDRVTITCRASQGVGTDLAWYQQKPGKAPNRLIFAASNLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLHHNSFPLAFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGGGVVKTGRSQRVSCATSGFTFSSYAIHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDSSKNTVYLQMNSLRTEDTAVYYCARSQASWQAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
DIQMTQSPSSLSASVGDRVTITCRASQGVGTDLAWYQQKPGKAPNRLIFAASNLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLHHNSFPLAFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
23.056028
22.58633
224
214
224
214
224
214
109
ab-h
ab-l
homo sapiens
homo sapiens
D
protein
glycoprotein c
sfts phlebovirus (isolate sftsv/human/china/hb29/2010)
56
22
0.79
HL
train
8wss_H
8wss
cryo-em structure of melanin-concentrating hormone receptor 1 with mch
yes
membrane protein
2023-10-17
2024-06-19
electron microscopy
3.01
N.A.
N.A.
38710677
10.1038/s41421-024-00679-8
0
auth_asym_id
scFv
N.A.
N.A.
H
N.A.
MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.526737
0
285
0
231
0
247
0
0
scfv16
N.A.
mus musculus
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
30;25
18;9
0.95;0.75
H_only
train
8qv5_B
8qv5
structure of human spns2 in lmng
no
lipid transport
2023-10-17
2025-02-19
electron microscopy
3.69
N.A.
N.A.
39820269
10.1038/s41467-025-55942-7
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGRLLSWYDMAWFRQAPGKEREFVAAVTSTGAGTHYVDSVKGRFTISRVNAKNTMYLQMNSLKPEDTAVYYCAAANTRLTALSLRTTTGSWAYWGKGTPVTVSSADYKDDDDKHHHHHH
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGRLLSWYDMAWFRQAPGKEREFVAAVTSTGAGTHYVDSVKGRFTISRVNAKNTMYLQMNSLKPEDTAVYYCAAANTRLTALSLRTTTGSWAYWGKGTPVTV
N.A.
13.676451
0
143
0
126
0
126
0
0
nanobody d12
N.A.
vicugna pacos
N.A.
A
protein
sphingosine-1-phosphate transporter spns2
homo sapiens
41
16
0.8
H_only
train
8qw4_B
8qw4
fzd3 in complex with nanobody 9
no
cell adhesion
2023-10-18
2024-09-04
electron microscopy
2.9
N.A.
N.A.
39174501
10.1038/s41467-024-51451-1
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
QVQLVESGGGLVQSGDSLRLSCTASGRIFNLDVMGWYRQAPGKRRELVADITSGGKINYADSVKGRFTISRDNTKDTVYLQMNSLKPEDTAVYYCNAEVEWLDMDYWGKGTQVTVSSHHHHHHHH
N.A.
QVQLVESGGGLVQSGDSLRLSCTASGRIFNLDVMGWYRQAPGKRRELVADITSGGKINYADSVKGRFTISRDNTKDTVYLQMNSLKPEDTAVYYCNAEVEWLDMDYWGKGTQVTV
N.A.
14.067143
0
125
0
114
0
115
0
0
nanobody nb9
N.A.
lama glama
N.A.
A
protein
frizzled-3
homo sapiens
39
15
0.88
H_only
train
8wu1_H_L
8wu1
cryo-em structure of cb1-beta-arrestin1 complex
yes
membrane protein
2023-10-19
2024-03-20
electron microscopy
3.2
N.A.
N.A.
38101408
10.1016/j.cell.2023.11.017
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EISEVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKGLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRQFWYSGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHHHHHHHHH
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYKYVPVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKGLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRQFWYSGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYKYVPVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKH
21.04099
21.402012
238
215
193
183
217
190
85
fab30 heavy chain
fab30 light chain
homo sapiens
homo sapiens
C
protein
beta-arrestin-1
bos taurus
41
16
0.84
HL
train
8up2_A_B
8up2
murine fab jar 4 bound to meningococcal factor h binding protein
no
immune system
2023-10-20
2024-10-16
x-ray diffraction
1.6
0.212
0.187
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV1
IGKV2
A
B
EVQLQQSGPVLVKPGASVKMSCKASGYTFTDYYMNWVKQSHGKSLEWIGRVNPSNGATTYNQKFKGKATVTVDKSLSTSYMQLNSLTSEDSAVYFCARDWEGPWFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
DVVMTQTPLTLSVTIGQPASISCKSSQTLFYSKGKTYLNWLFQRPGQSPKRLIYLVSKLDSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCLQSTHFPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS
EVQLQQSGPVLVKPGASVKMSCKASGYTFTDYYMNWVKQSHGKSLEWIGRVNPSNGATTYNQKFKGKATVTVDKSLSTSYMQLNSLTSEDSAVYFCARDWEGPWFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DVVMTQTPLTLSVTIGQPASISCKSSQTLFYSKGKTYLNWLFQRPGQSPKRLIYLVSKLDSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCLQSTHFPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
20.136765
23.967514
223
220
209
217
218
217
96
human-mouse chimeric immunoglobulin heavy chain, fd fragment
human-mouse chimeric immunoglobulin, kappa light chain
mus musculus
mus musculus
C
protein
factor h binding protein, sequence variant id 1
neisseria meningitidis
34
15
0.79
HL
train
8up2_D_E
8up2
murine fab jar 4 bound to meningococcal factor h binding protein
no
immune system
2023-10-20
2024-10-16
x-ray diffraction
1.6
0.212
0.187
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV1
IGKV2
D
E
EVQLQQSGPVLVKPGASVKMSCKASGYTFTDYYMNWVKQSHGKSLEWIGRVNPSNGATTYNQKFKGKATVTVDKSLSTSYMQLNSLTSEDSAVYFCARDWEGPWFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
DVVMTQTPLTLSVTIGQPASISCKSSQTLFYSKGKTYLNWLFQRPGQSPKRLIYLVSKLDSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCLQSTHFPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS
EVQLQQSGPVLVKPGASVKMSCKASGYTFTDYYMNWVKQSHGKSLEWIGRVNPSNGATTYNQKFKGKATVTVDKSLSTSYMQLNSLTSEDSAVYFCARDWEGPWFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DVVMTQTPLTLSVTIGQPASISCKSSQTLFYSKGKTYLNWLFQRPGQSPKRLIYLVSKLDSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCLQSTHFPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
20.1578
23.918907
223
220
209
216
218
216
95
human-mouse chimeric immunoglobulin heavy chain, fd fragment
human-mouse chimeric immunoglobulin, kappa light chain
mus musculus
mus musculus
F
protein
factor h binding protein, sequence variant id 1
neisseria meningitidis
31
15
0.94
HL
train
8wvg_H_L
8wvg
human vmat2 in complex with tetrabenazine
no
membrane protein
2023-10-23
2024-09-25
electron microscopy
3.18
N.A.
N.A.
39284862
10.1038/s41467-024-51960-z
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
H
L
GGSSRSSLEVKLQESGAELVKPGASVKLSCKASGYTFTSYWIDWVKQRPGQGLEWIGNIYPGNSSTNYNEKFKNKATLTVDTSSSTAYMQLSSLTSDDSAVYYCAREDYYDGTYVYYAMDFWGQGTSVTVSSAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSA...
AQAAELDIVMTQSQKFMSTSVGDRVSITCKASQNVGTDVSWYQQKPGKSPKPLIYWASNRFTGVPDRFTGSRSGTDFTLTISNVQSEDLADYFCEQYSSYPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVKLQESGAELVKPGASVKLSCKASGYTFTSYWIDWVKQRPGQGLEWIGNIYPGNSSTNYNEKFKNKATLTVDTSSSTAYMQLSSLTSDDSAVYYCAREDYYDGTYVYYAMDFWGQGTSVTVSSAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
DIVMTQSQKFMSTSVGDRVSITCKASQNVGTDVSWYQQKPGKSPKPLIYWASNRFTGVPDRFTGSRSGTDFTLTISNVQSEDLADYFCEQYSSYPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE
23.772882
23.428673
336
220
224
213
224
213
96
fabh
fabl
mus musculus
mus musculus
A
protein
synaptic vesicular amine transporter
homo sapiens
48
22
0.85
HL
train
8ww2_N
8ww2
gpr3/gs complex
no
membrane protein
2023-10-24
2024-02-14
electron microscopy
2.79
N.A.
N.A.
38287117
10.1038/s41422-024-00932-5
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
14.175532
0
138
0
128
0
128
0
0
nb35
N.A.
lama glama
N.A.
B;A
protein;protein
guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(s) subunit alpha isoforms short
homo sapiens;homo sapiens
30;41
11;11
0.73;0.55
H_only
train
8qxc_A_B
8qxc
crystal structure of antibody fab mil-3 with peng-lys
no
immune system
2023-10-24
2024-07-31
x-ray diffraction
2.3
0.266
0.217
39127707
10.1038/s41467-024-51138-7
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
A
B
MGWSCIILFLVATATGVHSQVQLKQSGGGLVQPKGSLKLSCAASGFTFNTYAMHWVRQAPGKGLEWVARIRSKSSNYATYYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVSITTRFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTSRHHHHHHSGSDYKDDDDK
MGWSCIILFLVATATGVHSETTVTQSPSSMYASLGERVTITCKASQDINSYLSWFQQKPGKSPKTLIYRASRLVDGVPSRFSGSGSGQDYSLTISSLEYEDMGIYYCLQYDEFPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLKQSGGGLVQPKGSLKLSCAASGFTFNTYAMHWVRQAPGKGLEWVARIRSKSSNYATYYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVSITTRFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
ETTVTQSPSSMYASLGERVTITCKASQDINSYLSWFQQKPGKSPKTLIYRASRLVDGVPSRFSGSGSGQDYSLTISSLEYEDMGIYYCLQYDEFPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
21.776436
23.355345
264
233
219
211
219
211
91
heavy chain of fab mil-3
light chain of fab mil-3
mus musculus
mus musculus
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
8qxc_C_D
8qxc
crystal structure of antibody fab mil-3 with peng-lys
no
immune system
2023-10-24
2024-07-31
x-ray diffraction
2.3
0.266
0.217
39127707
10.1038/s41467-024-51138-7
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
C
D
MGWSCIILFLVATATGVHSQVQLKQSGGGLVQPKGSLKLSCAASGFTFNTYAMHWVRQAPGKGLEWVARIRSKSSNYATYYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVSITTRFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTSRHHHHHHSGSDYKDDDDK
MGWSCIILFLVATATGVHSETTVTQSPSSMYASLGERVTITCKASQDINSYLSWFQQKPGKSPKTLIYRASRLVDGVPSRFSGSGSGQDYSLTISSLEYEDMGIYYCLQYDEFPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLKQSGGGLVQPKGSLKLSCAASGFTFNTYAMHWVRQAPGKGLEWVARIRSKSSNYATYYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVSITTRFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
TTVTQSPSSMYASLGERVTITCKASQDINSYLSWFQQKPGKSPKTLIYRASRLVDGVPSRFSGSGSGQDYSLTISSLEYEDMGIYYCLQYDEFPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
20.716557
23.255335
264
233
195
211
219
211
80
heavy chain of fab mil-3
light chain of fab mil-3
mus musculus
mus musculus
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
8qxc_H_L
8qxc
crystal structure of antibody fab mil-3 with peng-lys
no
immune system
2023-10-24
2024-07-31
x-ray diffraction
2.3
0.266
0.217
39127707
10.1038/s41467-024-51138-7
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
MGWSCIILFLVATATGVHSQVQLKQSGGGLVQPKGSLKLSCAASGFTFNTYAMHWVRQAPGKGLEWVARIRSKSSNYATYYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVSITTRFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTSRHHHHHHSGSDYKDDDDK
MGWSCIILFLVATATGVHSETTVTQSPSSMYASLGERVTITCKASQDINSYLSWFQQKPGKSPKTLIYRASRLVDGVPSRFSGSGSGQDYSLTISSLEYEDMGIYYCLQYDEFPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLKQSGGGLVQPKGSLKLSCAASGFTFNTYAMHWVRQAPGKGLEWVARIRSKSSNYATYYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVSITTRFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
ETTVTQSPSSMYASLGERVTITCKASQDINSYLSWFQQKPGKSPKTLIYRASRLVDGVPSRFSGSGSGQDYSLTISSLEYEDMGIYYCLQYDEFPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
22.401066
23.263948
264
233
221
214
221
214
103
heavy chain of fab mil-3
light chain of fab mil-3
mus musculus
mus musculus
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
8qy9_H_L
8qy9
j22.9-h, fully humanized fab fragment based on chimeric j22.9-xi igg against bcma
yes
immune system
2023-10-25
2024-01-17
x-ray diffraction
3.1
0.301
0.254
39052065
10.1007/s00109-024-02470-4
0
auth_asym_id
FabH:FabL
IGHV3
IGKV3
H
L
EVQLVESGGGLVQPGGSLRLSCAASGFTFSRYWMSWVRQAPGKGLVWVGEINPDSSTINYAPSLKDKFTISRDNAKNTLYLQMNSLRAEDTAVYYCASLYYDYGDAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPA
EIVMTQSPATLSVSPGERATLSCKASQSVDSNVAWYQQKPGQAPRALIYSASLRFSGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNYPLTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
EVQLVESGGGLVQPGGSLRLSCAASGFTFSRYWMSWVRQAPGKGLVWVGEINPDSSTINYAPSLKDKFTISRDNAKNTLYLQMNSLRAEDTAVYYCASLYYDYGDAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPA
EIVMTQSPATLSVSPGERATLSCKASQSVDSNVAWYQQKPGQAPRALIYSASLRFSGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNYPLTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
21.841341
22.867079
221
211
215
211
221
211
90
fab heavy chain of j22.9-h
fab light chain of j22.9-h
mus musculus
mus musculus
A
peptide
tumor necrosis factor receptor superfamily member 17
homo sapiens
35
17
0.81
HL
train
8qyb_H_L
8qyb
j22.9-isy, fully humanized and cdr optimized fab fragment based on chimeric j22.9-xi igg against bcma
yes
immune system
2023-10-25
2024-01-17
x-ray diffraction
3.09
0.288
0.232
39052065
10.1007/s00109-024-02470-4
0
auth_asym_id
FabH:FabL
IGHV3
IGKV3
H
L
EVQLVESGGGLVQPGGSLRLSCAASGFTFSRYWISWVRQAPGKGLVWVGEINPSSSTINYAPSLKDKFTISRDNAKNTLYLQMNSLRAEDTAVYYCASLYYDYGDAYDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPA
EIVMTQSPATLSVSPGERATLSCKASQSVESNVAWYQQKPGQAPRALIYSASLRFSGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNYPLTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
EVQLVESGGGLVQPGGSLRLSCAASGFTFSRYWISWVRQAPGKGLVWVGEINPSSSTINYAPSLKDKFTISRDNAKNTLYLQMNSLRAEDTAVYYCASLYYDYGDAYDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
EIVMTQSPATLSVSPGERATLSCKASQSVESNVAWYQQKPGQAPRALIYSASLRFSGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNYPLTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
21.729866
22.849123
221
211
214
211
220
211
90
fab heavy chain of j22.9-isy
fab light chain of j22.9-isy
mus musculus
mus musculus
A
peptide
tumor necrosis factor receptor superfamily member 17
homo sapiens
37
19
0.83
HL
train
8urf_H_L
8urf
crystal structure of human asgr2 crd (carbohydrate recognition domain) bound to 8g8 fab
no
sugar binding protein
2023-10-25
2024-06-19
x-ray diffraction
1.9
0.203
0.166
38847394
10.7554/eLife.93908
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
H
L
QVQLQQSGPELVRPGTSVKISCKASGYTFLTYWMNWVKQRPGQGLEWIGQIFPATGSTHYNEMFKDKATLNEDTSSNTAYMQLSGLTSEDTAVYFCARSRYRNGLDYWGQGTTLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSGSGHHHHHH
DIQMTQSPASLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQLLVYNAKTLAEGVPSRFSGSGSGTQFSLKINSLQPEDFGNYHCQHHYDTPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLQQSGPELVRPGTSVKISCKASGYTFLTYWMNWVKQRPGQGLEWIGQIFPATGSTHYNEMFKDKATLNEDTSSNTAYMQLSGLTSEDTAVYFCARSRYRNGLDYWGQGTTLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIQMTQSPASLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQLLVYNAKTLAEGVPSRFSGSGSGTQFSLKINSLQPEDFGNYHCQHHYDTPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
22.376331
22.728645
232
214
211
211
217
211
101
8g8 fab heavy chain
8g8 fab light chain
homo sapiens
homo sapiens
A
protein
asialoglycoprotein receptor 2
homo sapiens
37
15
0.88
HL
train
8wwh_E
8wwh
mchr1-gi complex,s1 state
no
membrane protein
2023-10-25
2024-11-13
electron microscopy
2.84
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELLEENLYFQ
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.167362
0
255
0
231
0
247
0
0
antibody fragment scfv16
N.A.
synthetic construct
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
37;24
23;10
0.92;0.83
H_only
train
8wwi_E
8wwi
mchr1-gi complex,s3 state
no
membrane protein
2023-10-25
2024-11-13
electron microscopy
3.43
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELLEENLYFQ
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.185259
0
255
0
231
0
247
0
0
antibody fragment scfv16
N.A.
synthetic construct
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
35;25
23;10
0.96;0.77
H_only
train
8wwl_E
8wwl
mch-mchr1-gi complex, t2 state
no
membrane protein
2023-10-25
2024-11-13
electron microscopy
2.78
N.A.
N.A.
39616153
10.1038/s41421-024-00754-0
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELLEENLYFQ
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.160728
0
255
0
231
0
247
0
0
antibody fragment scfv16
N.A.
synthetic construct
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
34;25
20;10
0.91;0.77
H_only
train
8wwm_E
8wwm
mch-mchr1-gi complex, l2 state
no
membrane protein
2023-10-25
2024-11-13
electron microscopy
2.81
N.A.
N.A.
39616153
10.1038/s41421-024-00754-0
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELLEENLYFQ
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.161537
0
255
0
231
0
247
0
0
antibody fragment scfv16
N.A.
synthetic construct
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
38;26
23;11
0.88;0.79
H_only
train
8wwn_E
8wwn
mch-mchr1-gi complex,l1 state
no
membrane protein
2023-10-25
2024-11-13
electron microscopy
2.65
N.A.
N.A.
39616153
10.1038/s41421-024-00754-0
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELLEENLYFQ
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.156172
0
255
0
231
0
247
0
0
antibody fragment scfv16
N.A.
synthetic construct
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
39;25
25;10
0.93;0.77
H_only
train
8qz2_C
8qz2
crystal structure of human two pore domain potassium ion channel trek-2 (k2p10.1) in complex with an inhibitory nanobody (nb61)
yes
membrane protein
2023-10-26
2024-05-29
x-ray diffraction
3.5
0.308
0.28
38755204
10.1038/s41467-024-48536-2
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
QVQLVESGGGLVQAGDSLRVSCAGSGFTFTSYGMGWFRQAPGKEREFVASINWNSNTAYADSVRGRFTISRDNAESMMYLQMNSLKPEDTAVYYCAATRAYSKPRVDSRHYDYWGQGTQVTVSSHHHHHHEPEA
N.A.
VQLVESGGGLVQAGDSLRVSCAGSGFTFTSYGMGWFRQAPGKEREFVASINWNSNTAYADSVRGRFTISRDNAESMMYLQMNSLKPEDTAVYYCAATRAYSKPRVDSRHYDYWGQGTQVTV
N.A.
13.483916
0
134
0
121
0
121
0
0
nanobody 61
N.A.
lama glama
N.A.
A;B
protein;protein
potassium channel subfamily k member 10;potassium channel subfamily k member 10
homo sapiens;homo sapiens
19;31
8;9
0.62;0.75
H_only
train
8qz4_C
8qz4
crystal structure of human two pore domain potassium ion channel trek-2 (k2p10.1) in complex with an activatory nanobody (nb76)
no
membrane protein
2023-10-26
2024-05-29
x-ray diffraction
3.2
0.298
0.27
38755204
10.1038/s41467-024-48536-2
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
QVQLVESGGGLVQPGRSLRLSCAASGYIFSSATMAWYRQAPGKQRELVASITRASNTVYADSVKGRFTISRDNGKNTVYLQMNSLKPEDTAVYYCNVWSRGYWGQGTQVTVSSHHHHHHEPEA
N.A.
QVQLVESGGGLVQPGRSLRLSCAASGYIFSSATMAWYRQAPGKQRELVASITRASNTVYADSVKGRFTISRDNGKNTVYLQMNSLKPEDTAVYYCNVWSRGYWGQGTQVTVS
N.A.
13.240447
0
123
0
112
0
112
0
0
nanobody 76
N.A.
lama glama
N.A.
A;B
protein;protein
potassium channel subfamily k member 10;potassium channel subfamily k member 10
homo sapiens;homo sapiens
25;27
9;5
0.75;0.31
H_only
train
8qz4_D
8qz4
crystal structure of human two pore domain potassium ion channel trek-2 (k2p10.1) in complex with an activatory nanobody (nb76)
no
membrane protein
2023-10-26
2024-05-29
x-ray diffraction
3.2
0.298
0.27
38755204
10.1038/s41467-024-48536-2
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
QVQLVESGGGLVQPGRSLRLSCAASGYIFSSATMAWYRQAPGKQRELVASITRASNTVYADSVKGRFTISRDNGKNTVYLQMNSLKPEDTAVYYCNVWSRGYWGQGTQVTVSSHHHHHHEPEA
N.A.
QVQLVESGGGLVQPGRSLRLSCAASGYIFSSATMAWYRQAPGKQRELVASITRASNTVYADSVKGRFTISRDNGKNTVYLQMNSLKPEDTAVYYCNVWSRGYWGQGTQVTVS
N.A.
13.24385
0
123
0
112
0
112
0
0
nanobody 76
N.A.
lama glama
N.A.
A;B
protein;protein
potassium channel subfamily k member 10;potassium channel subfamily k member 10
homo sapiens;homo sapiens
26;19
5;8
0.31;0.89
H_only
train
8qz6_B
8qz6
structure of human ceramide synthase 6 (cers6) bound to c16:0
no
membrane protein
2023-10-26
2024-11-13
electron microscopy
3.2
N.A.
N.A.
39528795
10.1038/s41594-024-01414-3
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
QVQLVESGGGLVQAEGSLRLSCAASGRTFRTYGMGWFRQAPGKEREFVAALNWSGSSTYYADSVKGRFTISRDNAKNTAYLQMNSLKPEDTAVYYCAALRRKAEYGSRSIADFDSWSKGTPVTVSSHHHHHHEPEA
N.A.
QVQLVESGGGLVQAEGSLRLSCAASGRTFRTYGMGWFRQAPGKEREFVAALNWSGSSTYYADSVKGRFTISRDNAKNTAYLQMNSLKPEDTAVYYCAALRRKAEYGSRSIADFDSWSKGTPVTV
N.A.
13.734437
0
136
0
124
0
124
0
0
nanobody-22
N.A.
vicugna pacos
N.A.
A
protein
isoform 2 of ceramide synthase 6
homo sapiens
34
13
0.87
H_only
train
8qz6_D
8qz6
structure of human ceramide synthase 6 (cers6) bound to c16:0
no
membrane protein
2023-10-26
2024-11-13
electron microscopy
3.2
N.A.
N.A.
39528795
10.1038/s41594-024-01414-3
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
QVQLVESGGGLVQAEGSLRLSCAASGRTFRTYGMGWFRQAPGKEREFVAALNWSGSSTYYADSVKGRFTISRDNAKNTAYLQMNSLKPEDTAVYYCAALRRKAEYGSRSIADFDSWSKGTPVTVSSHHHHHHEPEA
N.A.
QVQLVESGGGLVQAEGSLRLSCAASGRTFRTYGMGWFRQAPGKEREFVAALNWSGSSTYYADSVKGRFTISRDNAKNTAYLQMNSLKPEDTAVYYCAALRRKAEYGSRSIADFDSWSKGTPVTV
N.A.
13.734431
0
136
0
124
0
124
0
0
nanobody-22
N.A.
vicugna pacos
N.A.
C
protein
isoform 2 of ceramide synthase 6
homo sapiens
34
13
0.87
H_only
train
8qz7_B
8qz7
structure of human ceramide synthase 6 (cers6) in complex with n-palmitoyl fumonisin b1
no
membrane protein
2023-10-26
2024-11-13
electron microscopy
3
N.A.
N.A.
39528795
10.1038/s41594-024-01414-3
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
QVQLVESGGGLVQAEGSLRLSCAASGRTFRTYGMGWFRQAPGKEREFVAALNWSGSSTYYADSVKGRFTISRDNAKNTAYLQMNSLKPEDTAVYYCAALRRKAEYGSRSIADFDSWSKGTPVTVSSHHHHHHEPEA
N.A.
QVQLVESGGGLVQAEGSLRLSCAASGRTFRTYGMGWFRQAPGKEREFVAALNWSGSSTYYADSVKGRFTISRDNAKNTAYLQMNSLKPEDTAVYYCAALRRKAEYGSRSIADFDSWSKGTPVTV
N.A.
13.733408
0
136
0
124
0
124
0
0
nanobody-22
N.A.
vicugna pacos
N.A.
A
protein
isoform 2 of ceramide synthase 6
homo sapiens
38
14
0.93
H_only
train
8qz7_D
8qz7
structure of human ceramide synthase 6 (cers6) in complex with n-palmitoyl fumonisin b1
no
membrane protein
2023-10-26
2024-11-13
electron microscopy
3
N.A.
N.A.
39528795
10.1038/s41594-024-01414-3
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
QVQLVESGGGLVQAEGSLRLSCAASGRTFRTYGMGWFRQAPGKEREFVAALNWSGSSTYYADSVKGRFTISRDNAKNTAYLQMNSLKPEDTAVYYCAALRRKAEYGSRSIADFDSWSKGTPVTVSSHHHHHHEPEA
N.A.
QVQLVESGGGLVQAEGSLRLSCAASGRTFRTYGMGWFRQAPGKEREFVAALNWSGSSTYYADSVKGRFTISRDNAKNTAYLQMNSLKPEDTAVYYCAALRRKAEYGSRSIADFDSWSKGTPVTV
N.A.
13.733411
0
136
0
124
0
124
0
0
nanobody-22
N.A.
vicugna pacos
N.A.
C
protein
isoform 2 of ceramide synthase 6
homo sapiens
37
14
0.93
H_only
train
8us0_B_C
8us0
human antibody s8v1-157 in complex with the a/american black duck/new brunswick/00464/2010(h4n6) ha head domain
no
viral protein/immune system
2023-10-27
2024-10-30
x-ray diffraction
3.7
0.293
0.246
38168412
10.1101/2023.12.13.571543
0
auth_asym_id
FabH:FabL
IGHV1
IGKV2
B
C
ASEVQLVQSGAEVKKPGASVKVSCKVSGYRLTALSMHWVRQAPGKGLEWMGGFDPEEDETIYAQNFQGRVTLTEDTSTDTVYMELSSLRSEDTGVYYCATLMGANPFDYWGQGTLIIVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH
ASDIVMTQSPSSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCKQALQTLYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVQSGAEVKKPGASVKVSCKVSGYRLTALSMHWVRQAPGKGLEWMGGFDPEEDETIYAQNFQGRVTLTEDTSTDTVYMELSSLRSEDTGVYYCATLMGANPFDYWGQGTLIIVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
DIVMTQSPSSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCKQALQTLYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
23.052505
22.902287
231
221
218
216
218
216
99
human antibody s8v1-157 heavy chain
human antibody s8v1-157 light chain
homo sapiens
homo sapiens
A
protein
hemagglutinin
influenza a virus
47
22
0.81
HL
train
8us0_E_F
8us0
human antibody s8v1-157 in complex with the a/american black duck/new brunswick/00464/2010(h4n6) ha head domain
no
viral protein/immune system
2023-10-27
2024-10-30
x-ray diffraction
3.7
0.293
0.246
38168412
10.1101/2023.12.13.571543
0
auth_asym_id
FabH:FabL
IGHV1
IGKV2
E
F
ASEVQLVQSGAEVKKPGASVKVSCKVSGYRLTALSMHWVRQAPGKGLEWMGGFDPEEDETIYAQNFQGRVTLTEDTSTDTVYMELSSLRSEDTGVYYCATLMGANPFDYWGQGTLIIVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH
ASDIVMTQSPSSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCKQALQTLYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVQSGAEVKKPGASVKVSCKVSGYRLTALSMHWVRQAPGKGLEWMGGFDPEEDETIYAQNFQGRVTLTEDTSTDTVYMELSSLRSEDTGVYYCATLMGANPFDYWGQGTLIIVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
DIVMTQSPSSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCKQALQTLYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
22.339722
23.419699
231
221
213
216
218
216
90
human antibody s8v1-157 heavy chain
human antibody s8v1-157 light chain
homo sapiens
homo sapiens
D
protein
hemagglutinin
influenza a virus
44
20
0.8
HL
train
8us0_H_I
8us0
human antibody s8v1-157 in complex with the a/american black duck/new brunswick/00464/2010(h4n6) ha head domain
no
viral protein/immune system
2023-10-27
2024-10-30
x-ray diffraction
3.7
0.293
0.246
38168412
10.1101/2023.12.13.571543
0
auth_asym_id
FabH:FabL
IGHV1
IGKV2
H
I
ASEVQLVQSGAEVKKPGASVKVSCKVSGYRLTALSMHWVRQAPGKGLEWMGGFDPEEDETIYAQNFQGRVTLTEDTSTDTVYMELSSLRSEDTGVYYCATLMGANPFDYWGQGTLIIVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH
ASDIVMTQSPSSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCKQALQTLYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVQSGAEVKKPGASVKVSCKVSGYRLTALSMHWVRQAPGKGLEWMGGFDPEEDETIYAQNFQGRVTLTEDTSTDTVYMELSSLRSEDTGVYYCATLMGANPFDYWGQGTLIIVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
DIVMTQSPSSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCKQALQTLYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
22.473284
23.193932
231
221
213
216
218
216
90
human antibody s8v1-157 heavy chain
human antibody s8v1-157 light chain
homo sapiens
homo sapiens
G
protein
hemagglutinin
influenza a virus
45
20
0.77
HL
train
8us0_K_L
8us0
human antibody s8v1-157 in complex with the a/american black duck/new brunswick/00464/2010(h4n6) ha head domain
no
viral protein/immune system
2023-10-27
2024-10-30
x-ray diffraction
3.7
0.293
0.246
38168412
10.1101/2023.12.13.571543
0
auth_asym_id
FabH:FabL
IGHV1
IGKV2
K
L
ASEVQLVQSGAEVKKPGASVKVSCKVSGYRLTALSMHWVRQAPGKGLEWMGGFDPEEDETIYAQNFQGRVTLTEDTSTDTVYMELSSLRSEDTGVYYCATLMGANPFDYWGQGTLIIVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH
ASDIVMTQSPSSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCKQALQTLYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVQSGAEVKKPGASVKVSCKVSGYRLTALSMHWVRQAPGKGLEWMGGFDPEEDETIYAQNFQGRVTLTEDTSTDTVYMELSSLRSEDTGVYYCATLMGANPFDYWGQGTLIIVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
DIVMTQSPSSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCKQALQTLYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
22.50211
23.210495
231
221
213
216
218
216
91
human antibody s8v1-157 heavy chain
human antibody s8v1-157 light chain
homo sapiens
homo sapiens
J
protein
hemagglutinin
influenza a virus
49
23
0.77
HL
train
8us0_N_O
8us0
human antibody s8v1-157 in complex with the a/american black duck/new brunswick/00464/2010(h4n6) ha head domain
no
viral protein/immune system
2023-10-27
2024-10-30
x-ray diffraction
3.7
0.293
0.246
38168412
10.1101/2023.12.13.571543
0
auth_asym_id
FabH:FabL
IGHV1
IGKV2
N
O
ASEVQLVQSGAEVKKPGASVKVSCKVSGYRLTALSMHWVRQAPGKGLEWMGGFDPEEDETIYAQNFQGRVTLTEDTSTDTVYMELSSLRSEDTGVYYCATLMGANPFDYWGQGTLIIVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH
ASDIVMTQSPSSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCKQALQTLYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVQSGAEVKKPGASVKVSCKVSGYRLTALSMHWVRQAPGKGLEWMGGFDPEEDETIYAQNFQGRVTLTEDTSTDTVYMELSSLRSEDTGVYYCATLMGANPFDYWGQGTLIIVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
DIVMTQSPSSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCKQALQTLYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
22.328056
23.425026
231
221
213
216
218
216
85
human antibody s8v1-157 heavy chain
human antibody s8v1-157 light chain
homo sapiens
homo sapiens
M
protein
hemagglutinin
influenza a virus
44
19
0.76
HL
train
8us0_Q_R
8us0
human antibody s8v1-157 in complex with the a/american black duck/new brunswick/00464/2010(h4n6) ha head domain
no
viral protein/immune system
2023-10-27
2024-10-30
x-ray diffraction
3.7
0.293
0.246
38168412
10.1101/2023.12.13.571543
0
auth_asym_id
FabH:FabL
IGHV1
IGKV2
Q
R
ASEVQLVQSGAEVKKPGASVKVSCKVSGYRLTALSMHWVRQAPGKGLEWMGGFDPEEDETIYAQNFQGRVTLTEDTSTDTVYMELSSLRSEDTGVYYCATLMGANPFDYWGQGTLIIVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH
ASDIVMTQSPSSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCKQALQTLYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVQSGAEVKKPGASVKVSCKVSGYRLTALSMHWVRQAPGKGLEWMGGFDPEEDETIYAQNFQGRVTLTEDTSTDTVYMELSSLRSEDTGVYYCATLMGANPFDYWGQGTLIIVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
DIVMTQSPSSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCKQALQTLYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
22.651863
23.008364
231
221
214
216
218
216
92
human antibody s8v1-157 heavy chain
human antibody s8v1-157 light chain
homo sapiens
homo sapiens
P
protein
hemagglutinin
influenza a virus
43
18
0.75
HL
train
8qzr_H_L
8qzr
sars-cov-2 delta rbd complexed with ba.4/5-9 fab
yes
viral protein
2023-10-29
2024-04-03
x-ray diffraction
3.77
0.3
0.251
38627386
10.1038/s41467-024-47393-3
0
auth_asym_id
FabH:FabL
IGHV1
IGKV3
H
L
EVQLVQSGPEVKKPGASVKVSCKASGDTFINSFFHWVRQAPGQGLEWMGIINPSGVSTTYAQKFQGRVTMTRDTSTTTFYMELSSLRSADTAVYYCARENGGNSGDFDYWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
EIGMTQSPATLSLSPGERGTLSCRASQSVSSYLAWYQQKPGQAPRLLIYNASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQHYNWPRYSFGQGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLVQSGPEVKKPGASVKVSCKASGDTFINSFFHWVRQAPGQGLEWMGIINPSGVSTTYAQKFQGRVTMTRDTSTTTFYMELSSLRSADTAVYYCARENGGNSGDFDYWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
EIGMTQSPATLSLSPGERGTLSCRASQSVSSYLAWYQQKPGQAPRLLIYNASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQHYNWPRYSFGQGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
22.171547
22.995846
225
215
219
215
222
215
101
ba.4/5-9 heavy chain
ba.4/5-9 light chain
homo sapiens
homo sapiens
C
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
63
25
0.78
HL
train
8qzr_A_B
8qzr
sars-cov-2 delta rbd complexed with ba.4/5-9 fab
yes
viral protein
2023-10-29
2024-04-03
x-ray diffraction
3.77
0.3
0.251
38627386
10.1038/s41467-024-47393-3
0
auth_asym_id
FabH:VL+
IGHV1
IGKV3
A
B
EVQLVQSGPEVKKPGASVKVSCKASGDTFINSFFHWVRQAPGQGLEWMGIINPSGVSTTYAQKFQGRVTMTRDTSTTTFYMELSSLRSADTAVYYCARENGGNSGDFDYWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
EIGMTQSPATLSLSPGERGTLSCRASQSVSSYLAWYQQKPGQAPRLLIYNASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQHYNWPRYSFGQGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLVQSGPEVKKPGASVKVSCKASGDTFINSFFHWVRQAPGQGLEWMGIINPSGVSTTYAQKFQGRVTMTRDTSTTTFYMELSSLRSADTAVYYCARENGGNSGDFDYWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDK
EIGMTQSPATLSLSPGERGTLSCRASQSVSSYLAWYQQKPGQAPRLLIYNASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQHYNWPRYSFGQGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYS
18.268076
15.785837
225
215
165
132
215
175
63
ba.4/5-9 heavy chain
ba.4/5-9 light chain
homo sapiens
homo sapiens
E
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
65
25
0.74
HL
train
8ut3_F_I
8ut3
cryoem structure of a/perth/16/2009 h3 in complex with flu ha central stem vh1-18 antibody uca6
no
viral protein/immune system
2023-10-30
2024-05-08
electron microscopy
2.8
N.A.
N.A.
38670113
10.1016/j.immuni.2024.03.022
0
auth_asym_id
VH:VL
IGHV1
IGKV3
F
I
QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARGLLQGVVILDSYYYTMDVWGQGTTVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRWTFGQGTKLEIK
VQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARGLLQGVVILDSYYYTMDVWGQGTTVTVS
IVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRWTFGQGTKLEI
14.23378
13.122024
127
109
125
107
125
107
52
uca6 hc fv
uca6 lc fv
homo sapiens
homo sapiens
B;C
protein;protein
hemagglutinin;hemagglutinin
influenza a virus;influenza a virus
10;42
5;19
0.83;0.95
HL
train
8ut4_I_H
8ut4
cryoem structure of a/michigan/45/2015 h1 in complex with flu ha central stem vh1-18 antibody 09-1b12
no
viral protein/immune system
2023-10-30
2024-05-08
electron microscopy
3.3
N.A.
N.A.
38670113
10.1016/j.immuni.2024.03.022
0
auth_asym_id
VH:VL
IGHV1
IGKV3
I
H
QVQLVQSAPEVKRPGASVRLSCKASGYTFNTYGIIWVRQAPGQGLEWMGWISAYTGNTNYAQKVQGRVTMTTDITTSTAYLELRGLRSDDTAVYYCARGLLQGAVILDSYHYALDFWGQGTTVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVTNRFIAWYQHKPGQSPRLLIYGASSRATGIPDRFSGRGSGTDFTLTISRLEPEDFAVYYCQQYDTSPRWTFGQGTKLEIK
VQLVQSAPEVKRPGASVRLSCKASGYTFNTYGIIWVRQAPGQGLEWMGWISAYTGNTNYAQKVQGRVTMTTDITTSTAYLELRGLRSDDTAVYYCARGLLQGAVILDSYHYALDFWGQGTTVTVSS
IVLTQSPGTLSLSPGERATLSCRASQSVTNRFIAWYQHKPGQSPRLLIYGASSRATGIPDRFSGRGSGTDFTLTISRLEPEDFAVYYCQQYDTSPRWTFGQGTKLEI
14.482937
13.450846
127
109
126
107
126
107
47
09-1b12 hc fv
09-1b12 lc fv
homo sapiens
homo sapiens
F
protein
hemagglutinin ha2 chain
influenza a virus
28
12
1
HL
train
8ut5_G_H
8ut5
cryoem structure of a/michigan/45/2015 h1 in complex with flu ha central stem vh1-18 antibody uca6_n55t
no
viral protein/immune system
2023-10-30
2024-05-08
electron microscopy
3.5
N.A.
N.A.
38670113
10.1016/j.immuni.2024.03.022
0
auth_asym_id
VH:VL
IGHV1
IGKV3
G
H
QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYTGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARGLLQGVVILDSYYYTMDVWGQGTTVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRWTFGQGTKLEIK
VQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYTGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARGLLQGVVILDSYYYTMDVWGQGTTVTVS
IVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRWTFGQGTKLEI
14.374966
13.292691
127
109
125
107
125
107
48
uca6_n55t hc fv
uca6_n55t lc fv
homo sapiens
homo sapiens
F
protein
hemagglutinin ha2 chain
influenza a virus
29
13
0.93
HL
train
8ut2_H_G
8ut2
pre-fusion measles virus fusion protein complexed with fab 77
yes
viral protein
2023-10-30
2024-07-03
electron microscopy
2.56
N.A.
N.A.
38935733
10.1126/science.adm8693
0
auth_asym_id
VH:VL
IGHV4
IGKV1
H
G
MGWSCIILFLVATATGVHSDVQLQESGPGLVKPSQSLSLTCTVSGYSITSDYAWNWIRQFPGNKLEWMGYISYTLTTGYNPSLKSRISITRDSSKNQFFLQLNSVTTEDTATYYCARSGWLLPYWYFDVWGAGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQGPTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAK...
MGWSCIILFLVATATGVHSDVQITQSPSYLAASPGETITINCRASKSISKYLAWYQEKPGKTNELLIYSGSTLQSGIPSRFRGSGSGTDFTLTISSLEPEDFAMYYCQQHNEYTLTFGGGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
DVQLQESGPGLVKPSQSLSLTCTVSGYSITSDYAWNWIRQFPGNKLEWMGYISYTLTTGYNPSLKSRISITRDSSKNQFFLQLNSVTTEDTATYYCARSGWLLPYWYFDVWGAGTTVTV
DVQITQSPSYLAASPGETITINCRASKSISKYLAWYQEKPGKTNELLIYSGSTLQSGIPSRFRGSGSGTDFTLTISSLEPEDFAMYYCQQHNEYTLTFGGGTKLELK
13.727679
13.308094
479
233
119
107
119
107
43
mab 77 heavy chain
mab 77 light chain
mus musculus
mus musculus
A;B
protein;protein
fusion glycoprotein f0;fusion glycoprotein f0
measles morbillivirus;measles morbillivirus
15;31
6;14
0.86;0.82
HL
train
8ut2_J_I
8ut2
pre-fusion measles virus fusion protein complexed with fab 77
yes
viral protein
2023-10-30
2024-07-03
electron microscopy
2.56
N.A.
N.A.
38935733
10.1126/science.adm8693
0
auth_asym_id
VH:VL
IGHV4
IGKV1
J
I
MGWSCIILFLVATATGVHSDVQLQESGPGLVKPSQSLSLTCTVSGYSITSDYAWNWIRQFPGNKLEWMGYISYTLTTGYNPSLKSRISITRDSSKNQFFLQLNSVTTEDTATYYCARSGWLLPYWYFDVWGAGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQGPTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAK...
MGWSCIILFLVATATGVHSDVQITQSPSYLAASPGETITINCRASKSISKYLAWYQEKPGKTNELLIYSGSTLQSGIPSRFRGSGSGTDFTLTISSLEPEDFAMYYCQQHNEYTLTFGGGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
DVQLQESGPGLVKPSQSLSLTCTVSGYSITSDYAWNWIRQFPGNKLEWMGYISYTLTTGYNPSLKSRISITRDSSKNQFFLQLNSVTTEDTATYYCARSGWLLPYWYFDVWGAGTTVTV
DVQITQSPSYLAASPGETITINCRASKSISKYLAWYQEKPGKTNELLIYSGSTLQSGIPSRFRGSGSGTDFTLTISSLEPEDFAMYYCQQHNEYTLTFGGGTKLELK
13.71499
13.307517
479
233
119
107
119
107
42
mab 77 heavy chain
mab 77 light chain
mus musculus
mus musculus
C;D;F
protein;protein;protein
fusion glycoprotein f0;fusion glycoprotein f0;fusion glycoprotein f0
measles morbillivirus;measles morbillivirus;measles morbillivirus
17;33;11
7;14;6
0.88;0.74;1.0
HL
train
8ut2_L_K
8ut2
pre-fusion measles virus fusion protein complexed with fab 77
yes
viral protein
2023-10-30
2024-07-03
electron microscopy
2.56
N.A.
N.A.
38935733
10.1126/science.adm8693
0
auth_asym_id
VH:VL
IGHV4
IGKV1
L
K
MGWSCIILFLVATATGVHSDVQLQESGPGLVKPSQSLSLTCTVSGYSITSDYAWNWIRQFPGNKLEWMGYISYTLTTGYNPSLKSRISITRDSSKNQFFLQLNSVTTEDTATYYCARSGWLLPYWYFDVWGAGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQGPTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAK...
MGWSCIILFLVATATGVHSDVQITQSPSYLAASPGETITINCRASKSISKYLAWYQEKPGKTNELLIYSGSTLQSGIPSRFRGSGSGTDFTLTISSLEPEDFAMYYCQQHNEYTLTFGGGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
DVQLQESGPGLVKPSQSLSLTCTVSGYSITSDYAWNWIRQFPGNKLEWMGYISYTLTTGYNPSLKSRISITRDSSKNQFFLQLNSVTTEDTATYYCARSGWLLPYWYFDVWGAGTTVTV
DVQITQSPSYLAASPGETITINCRASKSISKYLAWYQEKPGKTNELLIYSGSTLQSGIPSRFRGSGSGTDFTLTISSLEPEDFAMYYCQQHNEYTLTFGGGTKLELK
13.747927
13.317734
479
233
119
107
119
107
44
mab 77 heavy chain
mab 77 light chain
mus musculus
mus musculus
E;F
protein;protein
fusion glycoprotein f0;fusion glycoprotein f0
measles morbillivirus;measles morbillivirus
17;33
6;14
0.86;0.74
HL
train
8utd_D
8utd
cryoem structure of hca2-gi1 in complex with mk-1903
yes
membrane protein
2023-10-30
2025-02-26
electron microscopy
3.24
N.A.
N.A.
39631393
10.1016/j.cell.2024.11.001
0
auth_asym_id
scFv
N.A.
N.A.
D
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAALEVLFQGPHHHHHHHH
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.708162
0
267
0
231
0
246
0
0
scfv16
N.A.
lama glama
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
32;18
18;7
0.86;0.78
H_only
train
8wyj_I_K
8wyj
the global map of omicron subvariants spike with two antibodies
no
viral protein
2023-10-31
2024-11-13
electron microscopy
3.1
N.A.
N.A.
39231977
10.1038/s41467-024-51973-8
0
auth_asym_id
VH:VL
IGHV1
IGKV3
I
K
QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSS
IVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIK
VQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSS
IVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIK
13.629456
12.525042
127
106
126
106
126
106
33
s309-hc
s309-kc
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
60
19
0.61
HL
train
8wyj_E_G
8wyj
the global map of omicron subvariants spike with two antibodies
no
viral protein
2023-10-31
2024-11-13
electron microscopy
3.1
N.A.
N.A.
39231977
10.1038/s41467-024-51973-8
0
auth_asym_id
VH:VL
IGHV1
IGKV3
E
G
QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSS
IVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIK
VQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSS
IVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIK
13.629439
12.52507
127
106
126
106
126
106
35
s309-hc
s309-kc
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
39
17
0.81
HL
train
8wyj_H_F
8wyj
the global map of omicron subvariants spike with two antibodies
no
viral protein
2023-10-31
2024-11-13
electron microscopy
3.1
N.A.
N.A.
39231977
10.1038/s41467-024-51973-8
0
auth_asym_id
VH:VL
IGHV1
IGKV1
H
F
QVQLVQSGAEVKKPGSSVKVSCKASGGTFRSHVISWVRQAPGQGLEWMGGFIPLFGTTIYAQAFQGRVMISADESTSTAYMELSSLRSEDTAVYFCARLFPNGDPNSPEDGFDIWGQGTLVTVSS
DIQMTQSPSSLSASVGDRVTITCQASQDIGNYLNWYQQKPGKAPKLLIYDASHLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQRYDDLPSYTFGQGTKVEIK
QVQLVQSGAEVKKPGSSVKVSCKASGGTFRSHVISWVRQAPGQGLEWMGGFIPLFGTTIYAQAFQGRVMISADESTSTAYMELSSLRSEDTAVYFCARLFPNGDPNSPEDGFDIWGQGTLVTV
DIQMTQSPSSLSASVGDRVTITCQASQDIGNYLNWYQQKPGKAPKLLIYDASHLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQRYDDLPSYTFGQGTKVEIK
13.619481
12.815137
125
108
123
108
123
108
42
sa55-hc
sa55_kc
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
39
21
0.88
HL
train
8wyj_Q_R
8wyj
the global map of omicron subvariants spike with two antibodies
no
viral protein
2023-10-31
2024-11-13
electron microscopy
3.1
N.A.
N.A.
39231977
10.1038/s41467-024-51973-8
0
auth_asym_id
VH:VL
IGHV1
IGKV1
Q
R
QVQLVQSGAEVKKPGSSVKVSCKASGGTFRSHVISWVRQAPGQGLEWMGGFIPLFGTTIYAQAFQGRVMISADESTSTAYMELSSLRSEDTAVYFCARLFPNGDPNSPEDGFDIWGQGTLVTVSS
DIQMTQSPSSLSASVGDRVTITCQASQDIGNYLNWYQQKPGKAPKLLIYDASHLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQRYDDLPSYTFGQGTKVEIK
QVQLVQSGAEVKKPGSSVKVSCKASGGTFRSHVISWVRQAPGQGLEWMGGFIPLFGTTIYAQAFQGRVMISADESTSTAYMELSSLRSEDTAVYFCARLFPNGDPNSPEDGFDIWGQGTLVTV
DIQMTQSPSSLSASVGDRVTITCQASQDIGNYLNWYQQKPGKAPKLLIYDASHLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQRYDDLPSYTFGQGTKVEIK
13.619464
12.815131
125
108
123
108
123
108
22
sa55-hc
sa55_kc
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
41
17
0.74
HL
train
8wyj_S_T
8wyj
the global map of omicron subvariants spike with two antibodies
no
viral protein
2023-10-31
2024-11-13
electron microscopy
3.1
N.A.
N.A.
39231977
10.1038/s41467-024-51973-8
0
auth_asym_id
VH:VL
IGHV1
IGKV3
S
T
QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSS
IVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIK
VQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSS
IVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIK
13.62946
12.525093
127
106
126
106
126
106
34
s309-hc
s309-kc
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
30
14
0.88
HL
train
8wyj_D
8wyj
the global map of omicron subvariants spike with two antibodies
no
viral protein
2023-10-31
2024-11-13
electron microscopy
3.1
N.A.
N.A.
39231977
10.1038/s41467-024-51973-8
0
auth_asym_id
VH
IGHV1
N.A.
D
N.A.
QVQLVQSGAEVKKPGSSVKVSCKASGGTFRSHVISWVRQAPGQGLEWMGGFIPLFGTTIYAQAFQGRVMISADESTSTAYMELSSLRSEDTAVYFCARLFPNGDPNSPEDGFDIWGQGTLVTVSS
N.A.
QVQLVQSGAEVKKPGSSVKVSCKASGGTFRSHVISWVRQAPGQGLEWMGGFIPLFGTTIYAQAFQGRVMISADESTSTAYMELSSLRSEDTAVYFCARLFPNGDPNSPEDGFDIWGQGTLVTV
N.A.
13.619467
0
125
0
123
0
123
0
0
sa55-hc
N.A.
homo sapiens
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
8wyj_J
8wyj
the global map of omicron subvariants spike with two antibodies
no
viral protein
2023-10-31
2024-11-13
electron microscopy
3.1
N.A.
N.A.
39231977
10.1038/s41467-024-51973-8
0
auth_asym_id
VL
N.A.
IGKV1
N.A.
J
N.A.
DIQMTQSPSSLSASVGDRVTITCQASQDIGNYLNWYQQKPGKAPKLLIYDASHLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQRYDDLPSYTFGQGTKVEIK
N.A.
DIQMTQSPSSLSASVGDRVTITCQASQDIGNYLNWYQQKPGKAPKLLIYDASHLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQRYDDLPSYTFGQGTKVEIK
0
12.815119
0
108
0
108
0
108
0
N.A.
sa55_kc
N.A.
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
L_only
train
8r1c_H_L
8r1c
sd1-2 fab in complex with sars-cov-2 ba.2.12.1 spike glycoprotein
yes
viral protein
2023-11-01
2024-03-13
electron microscopy
2.2
N.A.
N.A.
38548763
10.1038/s41467-024-46982-6
0
auth_asym_id
VH:VL
IGHV4
IGLV2
H
L
QVQLVQSGPGLVKPSQTLSLTCSVSGDSISSGTYYWSWIRLPAGQGLEWIGRVHSSGSTSYNPSLKSRVTISVDTSKNNFSLKLSSVTAADTAVYYCVRLDNCSAGYCHAFDIWGQGTMVTVSS
QSVLTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKVMIYEVSKWPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSGTYVFGTGTKVTVL
QVQLVQSGPGLVKPSQTLSLTCSVSGDSISSGTYYWSWIRLPAGQGLEWIGRVHSSGSTSYNPSLKSRVTISVDTSKNNFSLKLSSVTAADTAVYYCVRLDNCSAGYCHAFDIWGQGTMVTVSS
SVLTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKVMIYEVSKWPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSGTYVFGTGTKVTVL
13.760392
13.097823
124
110
124
109
124
109
48
sd1-2 fab heavy chain
sd1-2 fab light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein,fibritin
severe acute respiratory syndrome coronavirus 2
37
18
0.82
HL
train
8r1c_D_E
8r1c
sd1-2 fab in complex with sars-cov-2 ba.2.12.1 spike glycoprotein
yes
viral protein
2023-11-01
2024-03-13
electron microscopy
2.2
N.A.
N.A.
38548763
10.1038/s41467-024-46982-6
0
auth_asym_id
VH:VL
IGHV4
IGLV2
D
E
QVQLVQSGPGLVKPSQTLSLTCSVSGDSISSGTYYWSWIRLPAGQGLEWIGRVHSSGSTSYNPSLKSRVTISVDTSKNNFSLKLSSVTAADTAVYYCVRLDNCSAGYCHAFDIWGQGTMVTVSS
QSVLTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKVMIYEVSKWPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSGTYVFGTGTKVTVL
QVQLVQSGPGLVKPSQTLSLTCSVSGDSISSGTYYWSWIRLPAGQGLEWIGRVHSSGSTSYNPSLKSRVTISVDTSKNNFSLKLSSVTAADTAVYYCVRLDNCSAGYCHAFDIWGQGTMVTVSS
SVLTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKVMIYEVSKWPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSGTYVFGTGTKVTVL
13.752571
13.092032
124
110
124
109
124
109
48
sd1-2 fab heavy chain
sd1-2 fab light chain
homo sapiens
homo sapiens
B
protein
spike glycoprotein,fibritin
severe acute respiratory syndrome coronavirus 2
37
18
0.82
HL
train
8r1c_F_G
8r1c
sd1-2 fab in complex with sars-cov-2 ba.2.12.1 spike glycoprotein
yes
viral protein
2023-11-01
2024-03-13
electron microscopy
2.2
N.A.
N.A.
38548763
10.1038/s41467-024-46982-6
0
auth_asym_id
VH:VL
IGHV4
IGLV2
F
G
QVQLVQSGPGLVKPSQTLSLTCSVSGDSISSGTYYWSWIRLPAGQGLEWIGRVHSSGSTSYNPSLKSRVTISVDTSKNNFSLKLSSVTAADTAVYYCVRLDNCSAGYCHAFDIWGQGTMVTVSS
QSVLTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKVMIYEVSKWPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSGTYVFGTGTKVTVL
QVQLVQSGPGLVKPSQTLSLTCSVSGDSISSGTYYWSWIRLPAGQGLEWIGRVHSSGSTSYNPSLKSRVTISVDTSKNNFSLKLSSVTAADTAVYYCVRLDNCSAGYCHAFDIWGQGTMVTVSS
SVLTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKVMIYEVSKWPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSGTYVFGTGTKVTVL
13.754668
13.09444
124
110
124
109
124
109
48
sd1-2 fab heavy chain
sd1-2 fab light chain
homo sapiens
homo sapiens
C
protein
spike glycoprotein,fibritin
severe acute respiratory syndrome coronavirus 2
35
16
0.8
HL
train
8r1d_H_L
8r1d
sd1-3 fab in complex with sars-cov-2 ba.2.12.1 spike glycoprotein
yes
viral protein
2023-11-01
2024-03-13
electron microscopy
2.37
N.A.
N.A.
38548763
10.1038/s41467-024-46982-6
0
auth_asym_id
VH:VL
IGHV3
IGLV3
H
L
QVQLVESGGGLVQPGGSLRLSCTASGVTFSSYAMSWVRQAPGKGLEWVSGISGSGDSTYYADSVKGRFTISRDNSKNTLYLQMNSLRVEDTAVYYCATHYCSGGSCPFDYWGQGTLVTVSS
PSALTQPPSVSVSPGQTASITCSGDKLGNKYAYWYQQKPGQSPVLVIFQDTMRPSGIPERFSASNSGNTATLTISGTQSIDEADYYCQAWDSNTAVFGGGTKLTVL
QVQLVESGGGLVQPGGSLRLSCTASGVTFSSYAMSWVRQAPGKGLEWVSGISGSGDSTYYADSVKGRFTISRDNSKNTLYLQMNSLRVEDTAVYYCATHYCSGGSCPFDYWGQGTLVTVSS
PSALTQPPSVSVSPGQTASITCSGDKLGNKYAYWYQQKPGQSPVLVIFQDTMRPSGIPERFSASNSGNTATLTISGTQSIDEADYYCQAWDSNTAVFGGGTKLTVL
13.534889
12.961821
121
106
121
106
121
106
42
sd1-3 fab heavy chain
sd1-3 fab light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein,fibritin
homo sapiens
33
16
0.84
HL
train
8r1d_F_G
8r1d
sd1-3 fab in complex with sars-cov-2 ba.2.12.1 spike glycoprotein
yes
viral protein
2023-11-01
2024-03-13
electron microscopy
2.37
N.A.
N.A.
38548763
10.1038/s41467-024-46982-6
0
auth_asym_id
VH:VL
IGHV3
IGLV3
F
G
QVQLVESGGGLVQPGGSLRLSCTASGVTFSSYAMSWVRQAPGKGLEWVSGISGSGDSTYYADSVKGRFTISRDNSKNTLYLQMNSLRVEDTAVYYCATHYCSGGSCPFDYWGQGTLVTVSS
PSALTQPPSVSVSPGQTASITCSGDKLGNKYAYWYQQKPGQSPVLVIFQDTMRPSGIPERFSASNSGNTATLTISGTQSIDEADYYCQAWDSNTAVFGGGTKLTVL
QVQLVESGGGLVQPGGSLRLSCTASGVTFSSYAMSWVRQAPGKGLEWVSGISGSGDSTYYADSVKGRFTISRDNSKNTLYLQMNSLRVEDTAVYYCATHYCSGGSCPFDYWGQGTLVTVSS
PSALTQPPSVSVSPGQTASITCSGDKLGNKYAYWYQQKPGQSPVLVIFQDTMRPSGIPERFSASNSGNTATLTISGTQSIDEADYYCQAWDSNTAVFGGGTKLTVL
13.541955
12.981798
121
106
121
106
121
106
42
sd1-3 fab heavy chain
sd1-3 fab light chain
homo sapiens
homo sapiens
B
protein
spike glycoprotein,fibritin
homo sapiens
31
16
0.89
HL
train
8r1d_D_E
8r1d
sd1-3 fab in complex with sars-cov-2 ba.2.12.1 spike glycoprotein
yes
viral protein
2023-11-01
2024-03-13
electron microscopy
2.37
N.A.
N.A.
38548763
10.1038/s41467-024-46982-6
0
auth_asym_id
VH:VL
IGHV3
IGLV3
D
E
QVQLVESGGGLVQPGGSLRLSCTASGVTFSSYAMSWVRQAPGKGLEWVSGISGSGDSTYYADSVKGRFTISRDNSKNTLYLQMNSLRVEDTAVYYCATHYCSGGSCPFDYWGQGTLVTVSS
PSALTQPPSVSVSPGQTASITCSGDKLGNKYAYWYQQKPGQSPVLVIFQDTMRPSGIPERFSASNSGNTATLTISGTQSIDEADYYCQAWDSNTAVFGGGTKLTVL
QVQLVESGGGLVQPGGSLRLSCTASGVTFSSYAMSWVRQAPGKGLEWVSGISGSGDSTYYADSVKGRFTISRDNSKNTLYLQMNSLRVEDTAVYYCATHYCSGGSCPFDYWGQGTLVTVSS
PSALTQPPSVSVSPGQTASITCSGDKLGNKYAYWYQQKPGQSPVLVIFQDTMRPSGIPERFSASNSGNTATLTISGTQSIDEADYYCQAWDSNTAVFGGGTKLTVL
13.529116
12.975255
121
106
121
106
121
106
42
sd1-3 fab heavy chain
sd1-3 fab light chain
homo sapiens
homo sapiens
C
protein
spike glycoprotein,fibritin
homo sapiens
32
16
0.89
HL
train
8wz4_H_L
8wz4
cryo-em structure of prefusion-stabilized rsv f (ds-cav1 strain: a2) in complex with nab 5b11 (localized refinement)
no
viral protein
2023-11-01
2024-11-06
electron microscopy
3.13
N.A.
N.A.
39572535
10.1038/s41467-024-54384-x
0
auth_asym_id
VH:VL
IGHV7
IGKV1
H
L
QIQLVQSGPELKKPGETVKISCKASGYTFTDYSMHWLKQAPGKGLKWMGWITTETGEPTYADDFKGRFAFSLETSASTAYLQINNLKNEDTGIYFCARYYYGPFYWGQGTLVTVST
DIQMTQSPASLSASVGETVTITCRSSGNIHNFLTWYQQKQGKSPQFLVYNAKTLADGVSSRFSGSGSGTQFSLKINSLQPEDFGIYYCQHFWTTPYTFGGGTKLEIK
QIQLVQSGPELKKPGETVKISCKASGYTFTDYSMHWLKQAPGKGLKWMGWITTETGEPTYADDFKGRFAFSLETSASTAYLQINNLKNEDTGIYFCARYYYGPFYWGQGTLVTVST
DIQMTQSPASLSASVGETVTITCRSSGNIHNFLTWYQQKQGKSPQFLVYNAKTLADGVSSRFSGSGSGTQFSLKINSLQPEDFGIYYCQHFWTTPYTFGGGTKLEIK
13.789071
13.283368
116
107
116
107
116
107
37
5b11 fab heavy chain
5b11 fab light chain
mus musculus
mus musculus
C
protein
rsv fusion glycoprotein
human respiratory syncytial virus a2
47
21
0.84
HL
train
8wz5_H_L
8wz5
cryo-em structure of prefusion-stabilized rsv f (ds-cav1 sc9-10 strain: b18537) in complex with humanized nab 5b11
no
viral protein
2023-11-01
2024-11-13
electron microscopy
3.51
N.A.
N.A.
39572535
10.1038/s41467-024-54384-x
0
auth_asym_id
VH:VL
IGHV7
IGKV1
H
L
QIQLVQSGPELKKPGASVKISCKASGYTFTDYSMHWLKQAPGKGLKWMGWITTETGEPTYADDFKGRFAFSLDTSASTAYLQISSLKAEDTGVYFCARYYYGPFYWGQGTLVTVSS
DIQMTQSPSSLSASVGDRVTITCRSSGNIHNFLTWYQQKPGKSPQFLVYNAKTLADGVPSRFSGSGSGTQFTLTISSLQPEDFGIYYCQHFWTTPYTFGGGTKVEIK
QIQLVQSGPELKKPGASVKISCKASGYTFTDYSMHWLKQAPGKGLKWMGWITTETGEPTYADDFKGRFAFSLDTSASTAYLQISSLKAEDTGVYFCARYYYGPFYWGQGTLVTVSS
DIQMTQSPSSLSASVGDRVTITCRSSGNIHNFLTWYQQKPGKSPQFLVYNAKTLADGVPSRFSGSGSGTQFTLTISSLQPEDFGIYYCQHFWTTPYTFGGGTKVEIK
13.869544
13.34811
116
107
116
107
116
107
36
5b11 fab heavy chain
5b11 fab light chain
mus musculus
mus musculus
A
protein
rsv fusion glycoprotein
human respiratory syncytial virus b
44
19
0.86
HL
train
8wz5_D_F
8wz5
cryo-em structure of prefusion-stabilized rsv f (ds-cav1 sc9-10 strain: b18537) in complex with humanized nab 5b11
no
viral protein
2023-11-01
2024-11-13
electron microscopy
3.51
N.A.
N.A.
39572535
10.1038/s41467-024-54384-x
0
auth_asym_id
VH:VL
IGHV7
IGKV1
D
F
QIQLVQSGPELKKPGASVKISCKASGYTFTDYSMHWLKQAPGKGLKWMGWITTETGEPTYADDFKGRFAFSLDTSASTAYLQISSLKAEDTGVYFCARYYYGPFYWGQGTLVTVSS
DIQMTQSPSSLSASVGDRVTITCRSSGNIHNFLTWYQQKPGKSPQFLVYNAKTLADGVPSRFSGSGSGTQFTLTISSLQPEDFGIYYCQHFWTTPYTFGGGTKVEIK
QIQLVQSGPELKKPGASVKISCKASGYTFTDYSMHWLKQAPGKGLKWMGWITTETGEPTYADDFKGRFAFSLDTSASTAYLQISSLKAEDTGVYFCARYYYGPFYWGQGTLVTVSS
DIQMTQSPSSLSASVGDRVTITCRSSGNIHNFLTWYQQKPGKSPQFLVYNAKTLADGVPSRFSGSGSGTQFTLTISSLQPEDFGIYYCQHFWTTPYTFGGGTKVEIK
13.869552
13.348061
116
107
116
107
116
107
36
5b11 fab heavy chain
5b11 fab light chain
mus musculus
mus musculus
B
protein
rsv fusion glycoprotein
human respiratory syncytial virus b
44
19
0.86
HL
train
8wz5_E_G
8wz5
cryo-em structure of prefusion-stabilized rsv f (ds-cav1 sc9-10 strain: b18537) in complex with humanized nab 5b11
no
viral protein
2023-11-01
2024-11-13
electron microscopy
3.51
N.A.
N.A.
39572535
10.1038/s41467-024-54384-x
0
auth_asym_id
VH:VL
IGHV7
IGKV1
E
G
QIQLVQSGPELKKPGASVKISCKASGYTFTDYSMHWLKQAPGKGLKWMGWITTETGEPTYADDFKGRFAFSLDTSASTAYLQISSLKAEDTGVYFCARYYYGPFYWGQGTLVTVSS
DIQMTQSPSSLSASVGDRVTITCRSSGNIHNFLTWYQQKPGKSPQFLVYNAKTLADGVPSRFSGSGSGTQFTLTISSLQPEDFGIYYCQHFWTTPYTFGGGTKVEIK
QIQLVQSGPELKKPGASVKISCKASGYTFTDYSMHWLKQAPGKGLKWMGWITTETGEPTYADDFKGRFAFSLDTSASTAYLQISSLKAEDTGVYFCARYYYGPFYWGQGTLVTVSS
DIQMTQSPSSLSASVGDRVTITCRSSGNIHNFLTWYQQKPGKSPQFLVYNAKTLADGVPSRFSGSGSGTQFTLTISSLQPEDFGIYYCQHFWTTPYTFGGGTKVEIK
13.869547
13.348019
116
107
116
107
116
107
36
5b11 fab heavy chain
5b11 fab light chain
mus musculus
mus musculus
C
protein
rsv fusion glycoprotein
human respiratory syncytial virus b
44
19
0.86
HL
train
8wze_H_L
8wze
cryo-em structure of prefusion-stabilized rsv f (ds-cav1 sc9-10 strain: b18537) in complex with humanized nab 5b11 (localized refinement)
no
viral protein
2023-11-02
2024-11-13
electron microscopy
3.32
N.A.
N.A.
39572535
10.1038/s41467-024-54384-x
0
auth_asym_id
VH:VL
IGHV7
IGKV1
H
L
QIQLVQSGPELKKPGASVKISCKASGYTFTDYSMHWLKQAPGKGLKWMGWITTETGEPTYADDFKGRFAFSLDTSASTAYLQISSLKAEDTGVYFCARYYYGPFYWGQGTLVTVSS
DIQMTQSPSSLSASVGDRVTITCRSSGNIHNFLTWYQQKPGKSPQFLVYNAKTLADGVPSRFSGSGSGTQFTLTISSLQPEDFGIYYCQHFWTTPYTFGGGTKVEIK
QIQLVQSGPELKKPGASVKISCKASGYTFTDYSMHWLKQAPGKGLKWMGWITTETGEPTYADDFKGRFAFSLDTSASTAYLQISSLKAEDTGVYFCARYYYGPFYWGQGTLVTVSS
DIQMTQSPSSLSASVGDRVTITCRSSGNIHNFLTWYQQKPGKSPQFLVYNAKTLADGVPSRFSGSGSGTQFTLTISSLQPEDFGIYYCQHFWTTPYTFGGGTKVEIK
13.823263
13.275331
116
107
116
107
116
107
35
5b11 fab heavy chain
5b11 fab light chain
mus musculus
mus musculus
C
protein
rsv pre-fusion glycoprotein
human respiratory syncytial virus b
42
18
0.78
HL
train
8uvy_B
8uvy
structure of akt1(e17k) with compound 3
yes
transferase/inhibitor
2023-11-05
2024-09-04
x-ray diffraction
2.11
0.255
0.206
39506119
10.1038/s41586-024-08176-4
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
QVQLQESGGGLVQAGGSLRLSCAASGIDVRIKTMAWYRQAPGKQRELLASVLVSGSTNYADPVKGRFTISRDNAKNTVYLQMNKLIPDDTAVYYCNTYGRLRRDVWGPGTQVTVSSHHHHHHEPEA
N.A.
QVQLQESGGGLVQAGGSLRLSCAASGIDVRIKTMAWYRQAPGKQRELLASVLVSGSTNYADPVKGRFTISRDNAKNTVYLQMNKLIPDDTAVYYCNTYGRLRRDVWGPGTQVTVSS
N.A.
13.401167
0
126
0
116
0
116
0
0
nb41
N.A.
lama glama
N.A.
A
protein
rac-alpha serine/threonine-protein kinase
homo sapiens
35
10
0.48
H_only
train
8x0t_H_L
8x0t
frizzled8 crd in complex with pf8_ac3 fab
no
signaling protein/immune system
2023-11-06
2023-11-22
x-ray diffraction
2.5
0.29
0.238
37926311
10.1016/j.ijbiomac.2023.127846
0
auth_asym_id
FabH:FabL
IGHV3
IGLV3
H
L
EVQLVESGGGLVQPGGSLRLSCAASGFTFSSFNMFWVRQAPGKGLEWVAGIDDDGSYPNYGSAVKGRATISRDNSKNTLYLQMNSLRAEDTAVYYCAKSGPRPPHTTYWHKSIDAWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCHHHHHHHH
ELTQPPSVSVSPGQTARITCSGDGSWCPFCFYGWYQQKPGQAPVTLIYLNNKRPSGIPERFSGSLSGSTNTLTISGVQAEDEADYYCGSSDFRRWAFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
EVQLVESGGGLVQPGGSLRLSCAASGFTFSSFNMFWVRQAPGKGLEWVAGIDDDGSYPNYGSAVKGRATISRDNSKNTLYLQMNSLRAEDTAVYYCAKSGPRPPHTTYWHKSIDAWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
ELTQPPSVSVSPGQTARITCSGDGSWCPFCFYGWYQQKPGQAPVTLIYLNNKRPSGIPERFSGSLSGSTNTLTISGVQAEDEADYYCGSSDFRRWAFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE
21.346636
23.918976
237
212
228
210
228
210
100
pf8_ac3 heavy chain
pf8_ac3 light chain
synthetic construct
synthetic construct
A
protein
frizzled-8
homo sapiens
47
23
0.88
HL
train
8x0x_G_K
8x0x
crystal structure of je-5c in complex with sars-cov-2 rbd
no
viral protein/immune system
2023-11-06
2024-06-05
x-ray diffraction
3.45
0.285
0.24
38857264
10.1371/journal.ppat.1012246
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
G
K
EVQLLESGGGLVQPGGSLRLSCAASGVTVTSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYCARDLREAGGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
DIVMTQSPSSLSASVGDRVTITCQASQDINNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQFDNLPWTFGQGTKVEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLLESGGGLVQPGGSLRLSCAASGVTVTSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYCARDLREAGGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
DIVMTQSPSSLSASVGDRVTITCQASQDINNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQFDNLPWTFGQGTKVEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
20.449486
23.48547
221
214
218
209
220
212
101
heavy chain of je-5c fab
light chain of je-5c fab
homo sapiens
homo sapiens
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
56
22
0.76
HL
train
8x0x_H_L
8x0x
crystal structure of je-5c in complex with sars-cov-2 rbd
no
viral protein/immune system
2023-11-06
2024-06-05
x-ray diffraction
3.45
0.285
0.24
38857264
10.1371/journal.ppat.1012246
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EVQLLESGGGLVQPGGSLRLSCAASGVTVTSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYCARDLREAGGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
DIVMTQSPSSLSASVGDRVTITCQASQDINNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQFDNLPWTFGQGTKVEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLLESGGGLVQPGGSLRLSCAASGVTVTSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYCARDLREAGGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
DIVMTQSPSSLSASVGDRVTITCQASQDINNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQFDNLPWTFGQGTKVEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
20.28624
23.278913
221
214
218
209
221
212
109
heavy chain of je-5c fab
light chain of je-5c fab
homo sapiens
homo sapiens
E
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
54
21
0.81
HL
train
8r38_H_L
8r38
biig2 anti-integrin fab
no
immune system
2023-11-08
2024-09-25
x-ray diffraction
1.38
0.217
0.195
39829743
10.1101/2025.01.08.631572
0
auth_asym_id
FabH:FabL
IGHV4
IGKV1
H
L
QVQLMESGPGLVQPSETLSLTCTVSGFSLTSYNVHWVRQPPGKGLEWMGVMWSGGSTDYNSTLKSRLSISRDTSQNQVFLKMNSLQSEDTTTYYCARDRTMGMTTPFDYWGQGVMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSSDVHTFPAVLQSGLYTLTSSVTSSTWPSQTVTCNVAHPASSTKVDKKVERRNG
DVQMTQSPSNLAASPGESVSINCKASKRISKYLAWYQQKPGKANKLLIYSGSTLQSGTPSRFSGSGSGTDFTLTIRNLEPEDFGLYYCQQHKEYPPTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPVVKSFNRNEC
VQLMESGPGLVQPSETLSLTCTVSGFSLTSYNVHWVRQPPGKGLEWMGVMWSGGSTDYNSTLKSRLSISRDTSQNQVFLKMNSLQSEDTTTYYCARDRTMGMTTPFDYWGQGVMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSSDVHTFPAVLQSGLYTLTSSVTSSTWPSQTVTCNVAHPASSTKVDKKVER
DVQMTQSPSNLAASPGESVSINCKASKRISKYLAWYQQKPGKANKLLIYSGSTLQSGTPSRFSGSGSGTDFTLTIRNLEPEDFGLYYCQQHKEYPPTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPVVKSFNRNEC
21.99826
23.779074
220
214
215
213
216
214
90
biig2 fab, heavy chain
biig2 fab, light chain
rattus norvegicus
rattus norvegicus
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
8ux6_B_A
8ux6
structure of fab201 with a t. parva sporozoite neutralizing b cell epitope of p67
no
immune system
2023-11-08
2024-10-16
x-ray diffraction
2
0.251
0.204
40384600
10.1002/pro.70153
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
B
A
SEVQLVESGGGLVQPGGSLRLSCAASGFNISSSSIHWVRQAPGKGLEWVASISPYYSSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGPGYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYYYAPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECGG
EVQLVESGGGLVQPGGSLRLSCAASGFNISSSSIHWVRQAPGKGLEWVASISPYYSSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGPGYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYYYAPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
21.081413
23.167778
221
216
209
211
217
211
77
fab201 heavy chain
fab201 light chain
homo sapiens
homo sapiens
E
peptide
p67 protein
theileria parva strain muguga
43
21
0.7
HL
train
8ux6_D_C
8ux6
structure of fab201 with a t. parva sporozoite neutralizing b cell epitope of p67
no
immune system
2023-11-08
2024-10-16
x-ray diffraction
2
0.251
0.204
40384600
10.1002/pro.70153
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
D
C
SEVQLVESGGGLVQPGGSLRLSCAASGFNISSSSIHWVRQAPGKGLEWVASISPYYSSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGPGYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYYYAPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECGG
EVQLVESGGGLVQPGGSLRLSCAASGFNISSSSIHWVRQAPGKGLEWVASISPYYSSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGPGYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYYYAPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
21.152473
23.13967
221
216
211
213
217
213
81
fab201 heavy chain
fab201 light chain
homo sapiens
homo sapiens
F
peptide
p67 protein
theileria parva strain muguga
43
22
0.73
HL
train
8uwz_A_B
8uwz
the structure of raamsizumab in complex with vegf121
no
signaling protein
2023-11-08
2024-11-13
x-ray diffraction
3.5
0.298
0.237
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
A
B
EVQLVESGGGLVQPGGSLRLSCAASGFDLWYYSIHWVRQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
DIQMTQSPSSLSASVGDRVTITCRASQAAYGRVAWYQQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLFTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVSWYVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFDLWYYSIHWVRQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
TQSPSSLSASVGDRVTITCRASQAAYGRVAWYQQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLFTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVSWYVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC
21.327412
23.097265
228
212
221
208
221
208
104
raamsizumab heavy chain
raamsizumab light chain s1c variant
homo sapiens
homo sapiens
E
protein
isoform vegf121 of vascular endothelial growth factor a, long form
homo sapiens
38
16
0.89
HL
train
8uwz_C_D
8uwz
the structure of raamsizumab in complex with vegf121
no
signaling protein
2023-11-08
2024-11-13
x-ray diffraction
3.5
0.298
0.237
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
C
D
EVQLVESGGGLVQPGGSLRLSCAASGFDLWYYSIHWVRQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
DIQMTQSPSSLSASVGDRVTITCRASQAAYGRVAWYQQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLFTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVSWYVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFDLWYYSIHWVRQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
TQSPSSLSASVGDRVTITCRASQAAYGRVAWYQQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLFTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVSWYVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC
20.91516
23.250069
228
212
216
205
220
208
97
raamsizumab heavy chain
raamsizumab light chain s1c variant
homo sapiens
homo sapiens
F
protein
isoform vegf121 of vascular endothelial growth factor a, long form
homo sapiens
43
18
0.82
HL
train
8x2l_H_L
8x2l
structure of human phagocyte nadph oxidase in the resting state in the presence of 2 mm nadph
no
oxidoreductase
2023-11-09
2024-01-24
electron microscopy
2.99
N.A.
N.A.
38355798
10.1038/s41586-024-07056-1
0
auth_asym_id
VH:VL
IGHV4
IGKV1
H
L
MKKNIAFLLASMFVFSIATNAYADVQLQESGPGLVKPSQSLSLTCSVTGYSLTSGSFWSWIRQFPGNKLEWMGYITYDGTSHFNPSLKSRFSITRDTSKNQFFLKLNSVTTEDTATYYCTRDPYRYDAMDFWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDLEHHHHHH
MKKNIAFLLASMFVFSIATNAYADIQLTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSKLHSGVPSRFTASGSGRDYSLAISNLEQEDIATYFCQQVFSLPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE
DVQLQESGPGLVKPSQSLSLTCSVTGYSLTSGSFWSWIRQFPGNKLEWMGYITYDGTSHFNPSLKSRFSITRDTSKNQFFLKLNSVTTEDTATYYCTRDPYRYDAMDFWGQGTSVTVSS
DIQLTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSKLHSGVPSRFTASGSGRDYSLAISNLEQEDIATYFCQQVFSLPWTFGGGTKLEIK
13.618371
13.177387
251
236
119
107
119
107
46
7d5 fab heavy chain
7d5 fab light chain
mus musculus
mus musculus
B
protein
cytochrome b-245 heavy chain
homo sapiens
41
17
0.77
HL
train
8x2k_E
8x2k
oea bound gpr3-gs complex structure
no
membrane protein
2023-11-09
2024-04-03
electron microscopy
3.03
N.A.
N.A.
38287118
10.1038/s41422-023-00919-8
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGLSVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKGSLEVLFQGPAAA
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGLSVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK
N.A.
17.705873
0
261
0
236
0
248
0
0
scfv16
N.A.
homo sapiens
N.A.
B;C
protein;protein
isoform gnas-2 of guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
34;24
20;10
0.91;0.83
H_only
train
8uxv_N
8uxv
consensus olfactory receptor consor51 in complex with mini-gs trimeric protein
no
signaling protein
2023-11-11
2024-10-30
electron microscopy
3.2
N.A.
N.A.
39478229
10.1038/s41586-024-08126-0
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSLEVLFQGPGHHHHHHHH
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV
N.A.
13.840559
0
145
0
126
0
126
0
0
nanobody 35
N.A.
lama glama
N.A.
X;Y
protein;protein
minigs399;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
41;31
11;11
0.58;0.73
H_only
train
8uxy_N
8uxy
consensus olfactory receptor consor1 bound to l-menthol and in complex with mini-gs trimeric protein
no
signaling protein
2023-11-11
2024-10-30
electron microscopy
3.3
N.A.
N.A.
39478229
10.1038/s41586-024-08126-0
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSLEVLFQGPGHHHHHHHH
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV
N.A.
14.009246
0
145
0
126
0
126
0
0
nanobody 35
N.A.
lama glama
N.A.
X;Y
protein;protein
gnas complex locus;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
36;29
11;10
0.65;0.67
H_only
train
8uy0_N
8uy0
consensus olfactory receptor consor2 bound to s-carvone and in complex with mini-gs trimeric protein
no
signaling protein
2023-11-11
2024-10-30
electron microscopy
3.2
N.A.
N.A.
39478229
10.1038/s41586-024-08126-0
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSLEVLFQGPGHHHHHHHH
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV
N.A.
13.945385
0
145
0
126
0
126
0
0
nanobody 35
N.A.
lama glama
N.A.
X;Y
protein;protein
minigs399;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
36;32
9;11
0.56;0.69
H_only
train
8r4c_C
8r4c
lrr domain of roco protein from c. tepidum bound to the activating nanobody nbroco2
no
hydrolase
2023-11-13
2024-05-01
electron microscopy
3.55
N.A.
N.A.
38666771
10.7554/eLife.94503
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGKLLSINVMGWYRQAPGKQRELVASITTGGRINYADSVKGRFTITRDNAKNTVYLQMDSLKPEDTAVYYCNADGIIAGLYQNDHWGQGTQVTVSSHHHHHHEPEA
N.A.
QLQESGGGLVQPGGSLRLSCAASGKLLSINVMGWYRQAPGKQRELVASITTGGRINYADSVKGRFTITRDNAKNTVYLQMDSLKPEDTAVYYCNADGIIAGLYQNDHWGQGTQVTV
N.A.
13.751725
0
130
0
116
0
116
0
0
nbroco2
N.A.
lama glama
N.A.
A
protein
rab family protein
chlorobaculum tepidum
68
16
0.5
H_only
train
8r4d_B
8r4d
focused map on the roc-cor domains of the roco protein from c. tepidum in the gtp state bound to the activating nanobody nbroco1
no
hydrolase
2023-11-13
2024-05-01
electron microscopy
3.88
N.A.
N.A.
38666771
10.7554/eLife.94503
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
QVQLQESGGGLVQAGGSLRLSCANSGLTFSTYTMGWFRQAPGKEREFVAAIRWSGTSTYYQDHADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAASRLRAGVKAPSEYDYWGQGTQVTVSSHHHHHHEPEA
N.A.
QAGGSLRLSCANSGLTFSTYTMGWFRQAPGKEREFVAAIRWSGTSTYYQDHADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAASRLRAGVKAPSEYDYWGQ
N.A.
13.354427
0
137
0
107
0
107
0
0
nbroco1
N.A.
lama glama
N.A.
A
protein
rab family protein
chlorobaculum tepidum
38
15
0.83
H_only
train
8uy6_B
8uy6
aquaporin z with alfa tag and bound to nanobody
no
membrane protein
2023-11-13
2024-09-25
electron microscopy
1.9
N.A.
N.A.
38361954
10.1016/j.yjsbx.2024.100097
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
SGEVQLQESGGGLVQPGGSLRLSCTASGVTISALNAMAMGWYRQAPGERRVMVAAVSERGNAMYRESVQGRFTVTRDFTNKMVSLQMDNLKPEDTAVYYCHVLEDRVDSFHDYWGQGTQVTVSS
N.A.
EVQLQESGGGLVQPGGSLRLSCTASGVTISALNAMAMGWYRQAPGERRVMVAAVSERGNAMYRESVQGRFTVTRDFTNKMVSLQMDNLKPEDTAVYYCHVLEDRVDSFHDYWGQGTQVTVSS
N.A.
14.257695
0
124
0
122
0
122
0
0
anti-alfa nanobody
N.A.
vicugna pacos
N.A.
A
protein
aquaporin z
escherichia coli
40
11
0.44
H_only
train
8uy6_D
8uy6
aquaporin z with alfa tag and bound to nanobody
no
membrane protein
2023-11-13
2024-09-25
electron microscopy
1.9
N.A.
N.A.
38361954
10.1016/j.yjsbx.2024.100097
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
SGEVQLQESGGGLVQPGGSLRLSCTASGVTISALNAMAMGWYRQAPGERRVMVAAVSERGNAMYRESVQGRFTVTRDFTNKMVSLQMDNLKPEDTAVYYCHVLEDRVDSFHDYWGQGTQVTVSS
N.A.
EVQLQESGGGLVQPGGSLRLSCTASGVTISALNAMAMGWYRQAPGERRVMVAAVSERGNAMYRESVQGRFTVTRDFTNKMVSLQMDNLKPEDTAVYYCHVLEDRVDSFHDYWGQGTQVTVSS
N.A.
14.257921
0
124
0
122
0
122
0
0
anti-alfa nanobody
N.A.
vicugna pacos
N.A.
C
protein
aquaporin z
escherichia coli
40
11
0.44
H_only
train
8uy6_F
8uy6
aquaporin z with alfa tag and bound to nanobody
no
membrane protein
2023-11-13
2024-09-25
electron microscopy
1.9
N.A.
N.A.
38361954
10.1016/j.yjsbx.2024.100097
0
auth_asym_id
VHH
IGHV3
N.A.
F
N.A.
SGEVQLQESGGGLVQPGGSLRLSCTASGVTISALNAMAMGWYRQAPGERRVMVAAVSERGNAMYRESVQGRFTVTRDFTNKMVSLQMDNLKPEDTAVYYCHVLEDRVDSFHDYWGQGTQVTVSS
N.A.
EVQLQESGGGLVQPGGSLRLSCTASGVTISALNAMAMGWYRQAPGERRVMVAAVSERGNAMYRESVQGRFTVTRDFTNKMVSLQMDNLKPEDTAVYYCHVLEDRVDSFHDYWGQGTQVTVSS
N.A.
14.25788
0
124
0
122
0
122
0
0
anti-alfa nanobody
N.A.
vicugna pacos
N.A.
E
protein
aquaporin z
escherichia coli
40
11
0.44
H_only
train
8uy6_H
8uy6
aquaporin z with alfa tag and bound to nanobody
no
membrane protein
2023-11-13
2024-09-25
electron microscopy
1.9
N.A.
N.A.
38361954
10.1016/j.yjsbx.2024.100097
0
auth_asym_id
VHH
IGHV3
N.A.
H
N.A.
SGEVQLQESGGGLVQPGGSLRLSCTASGVTISALNAMAMGWYRQAPGERRVMVAAVSERGNAMYRESVQGRFTVTRDFTNKMVSLQMDNLKPEDTAVYYCHVLEDRVDSFHDYWGQGTQVTVSS
N.A.
EVQLQESGGGLVQPGGSLRLSCTASGVTISALNAMAMGWYRQAPGERRVMVAAVSERGNAMYRESVQGRFTVTRDFTNKMVSLQMDNLKPEDTAVYYCHVLEDRVDSFHDYWGQGTQVTVSS
N.A.
14.257865
0
124
0
122
0
122
0
0
anti-alfa nanobody
N.A.
vicugna pacos
N.A.
G
protein
aquaporin z
escherichia coli
40
11
0.44
H_only
train
8uy6_J
8uy6
aquaporin z with alfa tag and bound to nanobody
no
membrane protein
2023-11-13
2024-09-25
electron microscopy
1.9
N.A.
N.A.
38361954
10.1016/j.yjsbx.2024.100097
0
auth_asym_id
VHH
IGHV3
N.A.
J
N.A.
SGEVQLQESGGGLVQPGGSLRLSCTASGVTISALNAMAMGWYRQAPGERRVMVAAVSERGNAMYRESVQGRFTVTRDFTNKMVSLQMDNLKPEDTAVYYCHVLEDRVDSFHDYWGQGTQVTVSS
N.A.
EVQLQESGGGLVQPGGSLRLSCTASGVTISALNAMAMGWYRQAPGERRVMVAAVSERGNAMYRESVQGRFTVTRDFTNKMVSLQMDNLKPEDTAVYYCHVLEDRVDSFHDYWGQGTQVTVSS
N.A.
14.257784
0
124
0
122
0
122
0
0
anti-alfa nanobody
N.A.
vicugna pacos
N.A.
I
protein
aquaporin z
escherichia coli
40
11
0.44
H_only
train
8uy6_L
8uy6
aquaporin z with alfa tag and bound to nanobody
no
membrane protein
2023-11-13
2024-09-25
electron microscopy
1.9
N.A.
N.A.
38361954
10.1016/j.yjsbx.2024.100097
0
auth_asym_id
VHH
IGHV3
N.A.
L
N.A.
SGEVQLQESGGGLVQPGGSLRLSCTASGVTISALNAMAMGWYRQAPGERRVMVAAVSERGNAMYRESVQGRFTVTRDFTNKMVSLQMDNLKPEDTAVYYCHVLEDRVDSFHDYWGQGTQVTVSS
N.A.
EVQLQESGGGLVQPGGSLRLSCTASGVTISALNAMAMGWYRQAPGERRVMVAAVSERGNAMYRESVQGRFTVTRDFTNKMVSLQMDNLKPEDTAVYYCHVLEDRVDSFHDYWGQGTQVTVSS
N.A.
14.257888
0
124
0
122
0
122
0
0
anti-alfa nanobody
N.A.
vicugna pacos
N.A.
K
protein
aquaporin z
escherichia coli
40
11
0.44
H_only
train
8uy6_N
8uy6
aquaporin z with alfa tag and bound to nanobody
no
membrane protein
2023-11-13
2024-09-25
electron microscopy
1.9
N.A.
N.A.
38361954
10.1016/j.yjsbx.2024.100097
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
SGEVQLQESGGGLVQPGGSLRLSCTASGVTISALNAMAMGWYRQAPGERRVMVAAVSERGNAMYRESVQGRFTVTRDFTNKMVSLQMDNLKPEDTAVYYCHVLEDRVDSFHDYWGQGTQVTVSS
N.A.
EVQLQESGGGLVQPGGSLRLSCTASGVTISALNAMAMGWYRQAPGERRVMVAAVSERGNAMYRESVQGRFTVTRDFTNKMVSLQMDNLKPEDTAVYYCHVLEDRVDSFHDYWGQGTQVTVSS
N.A.
14.257691
0
124
0
122
0
122
0
0
anti-alfa nanobody
N.A.
vicugna pacos
N.A.
M
protein
aquaporin z
escherichia coli
40
11
0.44
H_only
train
8uy6_P
8uy6
aquaporin z with alfa tag and bound to nanobody
no
membrane protein
2023-11-13
2024-09-25
electron microscopy
1.9
N.A.
N.A.
38361954
10.1016/j.yjsbx.2024.100097
0
auth_asym_id
VHH
IGHV3
N.A.
P
N.A.
SGEVQLQESGGGLVQPGGSLRLSCTASGVTISALNAMAMGWYRQAPGERRVMVAAVSERGNAMYRESVQGRFTVTRDFTNKMVSLQMDNLKPEDTAVYYCHVLEDRVDSFHDYWGQGTQVTVSS
N.A.
EVQLQESGGGLVQPGGSLRLSCTASGVTISALNAMAMGWYRQAPGERRVMVAAVSERGNAMYRESVQGRFTVTRDFTNKMVSLQMDNLKPEDTAVYYCHVLEDRVDSFHDYWGQGTQVTVSS
N.A.
14.257915
0
124
0
122
0
122
0
0
anti-alfa nanobody
N.A.
vicugna pacos
N.A.
O
protein
aquaporin z
escherichia coli
40
11
0.44
H_only
train
8uyq_N
8uyq
consensus olfactory receptor consor4 bound to 2-methylthiazoline and in complex with mini-gs trimeric protein
no
signaling protein
2023-11-13
2024-10-30
electron microscopy
3.5
N.A.
N.A.
39478229
10.1038/s41586-024-08126-0
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSLEVLFQGPGHHHHHHHH
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV
N.A.
13.435201
0
145
0
126
0
126
0
0
nanobody 35
N.A.
lama glama
N.A.
X;Y
protein;protein
gnas complex locus;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
48;34
12;12
0.52;0.71
H_only
train
8r4o_B
8r4o
salt inducible kinase 3 in complex with inhibitor
yes
ligase
2023-11-14
2024-03-27
x-ray diffraction
2.73
0.244
0.214
38508313
10.1016/j.jbc.2024.107201
0
auth_asym_id
scFv
N.A.
N.A.
B
N.A.
EVQLVQSGAGVKKPGSSVKVSCKSSGGTSGSSAVSWIRQAPGQGVEWMGGITSIFGPANYAQKFQDRLKITADKATNTVYMELSGLTFEDTAVYYCARVGDYNFWNGHYRSGYYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNTQRPSGVPDRFSGSKSATSASLAISGLQSEDEADYYCAAWDDSLNGHVVFGGGTKVTVLGAAAENLYFQGSHHHHHH
N.A.
EVQLVQSGAGVKKPGSSVKVSCKSSGGTSGSSAVSWIRQAPGQGVEWMGGITSIFGPANYAQKFQDRLKITADKATNTVYMELSGLTFEDTAVYYCARVGDYNFWNGHYRSGYYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNTQRPSGVPDRFSGSKSATSASLAISGLQSEDEADYYCAAWDDSLNGHVVFGGGTKVTVLGAAAENLYF
N.A.
18.692675
0
273
0
244
0
264
0
0
scfvh1
N.A.
homo sapiens
N.A.
A
protein
serine/threonine-protein kinase sik3
homo sapiens
60
16
0.57
H_only
train