PDB_ID_chain
stringlengths
6
10
PDB_ID
stringlengths
4
4
Title
stringlengths
4
230
Mutation(s)
stringclasses
2 values
Classification
stringclasses
305 values
Deposit_date
stringdate
1976-03-17 00:00:00
2026-01-20 00:00:00
Release_date
stringdate
1976-05-19 00:00:00
2026-02-25 00:00:00
Method
stringclasses
5 values
Resolution
stringclasses
459 values
R_free
stringclasses
227 values
R_work
stringclasses
211 values
PMID
stringlengths
4
8
DOI
stringlengths
4
68
Model_index
int64
0
76
Asym_ID_type
stringclasses
2 values
Ab_type
stringclasses
30 values
H_subgroup
stringclasses
8 values
L_subgroup
stringclasses
19 values
H_chain_ID
stringclasses
60 values
L_chain_ID
stringclasses
58 values
H_fas_seq
stringlengths
4
919
L_fas_seq
stringlengths
4
627
H_filled_pdb_seq
stringlengths
4
896
L_filled_pdb_seq
stringlengths
4
523
H_mean_radius
float64
0
79.7
L_mean_radius
float64
0
84.3
H_fas_seq_len
int64
0
919
L_fas_seq_len
int64
0
627
H_pdb_seq_len
int64
0
879
L_pdb_seq_len
int64
0
523
H_filled_seq_len
int64
0
896
L_filled_seq_len
int64
0
523
HL_inf_res_num
int64
0
175
H_mol_name
stringlengths
2
331
L_mol_name
stringlengths
2
151
H_species
stringclasses
68 values
L_species
stringclasses
42 values
Ag_chain_ID(s)
stringclasses
279 values
Ag_type(s)
stringclasses
16 values
Ag_mol_name(s)
stringlengths
2
390
Ag_species
stringclasses
743 values
Ab_ag_inf_res_num
stringlengths
1
11
CDR_inf_res_num
stringclasses
444 values
CDR_inf_res_ratio
stringlengths
1
19
hl_label
stringclasses
3 values
split
stringclasses
1 value
8r4o_D
8r4o
salt inducible kinase 3 in complex with inhibitor
yes
ligase
2023-11-14
2024-03-27
x-ray diffraction
2.73
0.244
0.214
38508313
10.1016/j.jbc.2024.107201
0
auth_asym_id
scFv
N.A.
N.A.
D
N.A.
EVQLVQSGAGVKKPGSSVKVSCKSSGGTSGSSAVSWIRQAPGQGVEWMGGITSIFGPANYAQKFQDRLKITADKATNTVYMELSGLTFEDTAVYYCARVGDYNFWNGHYRSGYYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNTQRPSGVPDRFSGSKSATSASLAISGLQSEDEADYYCAAWDDSLNGHVVFGGGTKVTVLGAAAENLYFQGSHHHHHH
N.A.
EVQLVQSGAGVKKPGSSVKVSCKSSGGTSGSSAVSWIRQAPGQGVEWMGGITSIFGPANYAQKFQDRLKITADKATNTVYMELSGLTFEDTAVYYCARVGDYNFWNGHYRSGYYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNTQRPSGVPDRFSGSKSATSASLAISGLQSEDEADYYCAAWDDSLNGHVVFGGGTKVTVLGAAAENLYF
N.A.
18.700836
0
273
0
244
0
264
0
0
scfvh1
N.A.
homo sapiens
N.A.
C
protein
serine/threonine-protein kinase sik3
homo sapiens
59
16
0.57
H_only
train
8r4o_F
8r4o
salt inducible kinase 3 in complex with inhibitor
yes
ligase
2023-11-14
2024-03-27
x-ray diffraction
2.73
0.244
0.214
38508313
10.1016/j.jbc.2024.107201
0
auth_asym_id
scFv
N.A.
N.A.
F
N.A.
EVQLVQSGAGVKKPGSSVKVSCKSSGGTSGSSAVSWIRQAPGQGVEWMGGITSIFGPANYAQKFQDRLKITADKATNTVYMELSGLTFEDTAVYYCARVGDYNFWNGHYRSGYYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNTQRPSGVPDRFSGSKSATSASLAISGLQSEDEADYYCAAWDDSLNGHVVFGGGTKVTVLGAAAENLYFQGSHHHHHH
N.A.
EVQLVQSGAGVKKPGSSVKVSCKSSGGTSGSSAVSWIRQAPGQGVEWMGGITSIFGPANYAQKFQDRLKITADKATNTVYMELSGLTFEDTAVYYCARVGDYNFWNGHYRSGYYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNTQRPSGVPDRFSGSKSATSASLAISGLQSEDEADYYCAAWDDSLNGHVVFGGGTKVTVLGAAAENLYFQ
N.A.
18.85052
0
273
0
245
0
265
0
0
scfvh1
N.A.
homo sapiens
N.A.
E
protein
serine/threonine-protein kinase sik3
homo sapiens
58
16
0.57
H_only
train
8r4o_H
8r4o
salt inducible kinase 3 in complex with inhibitor
yes
ligase
2023-11-14
2024-03-27
x-ray diffraction
2.73
0.244
0.214
38508313
10.1016/j.jbc.2024.107201
0
auth_asym_id
scFv
N.A.
N.A.
H
N.A.
EVQLVQSGAGVKKPGSSVKVSCKSSGGTSGSSAVSWIRQAPGQGVEWMGGITSIFGPANYAQKFQDRLKITADKATNTVYMELSGLTFEDTAVYYCARVGDYNFWNGHYRSGYYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNTQRPSGVPDRFSGSKSATSASLAISGLQSEDEADYYCAAWDDSLNGHVVFGGGTKVTVLGAAAENLYFQGSHHHHHH
N.A.
EVQLVQSGAGVKKPGSSVKVSCKSSGGTSGSSAVSWIRQAPGQGVEWMGGITSIFGPANYAQKFQDRLKITADKATNTVYMELSGLTFEDTAVYYCARVGDYNFWNGHYRSGYYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNTQRPSGVPDRFSGSKSATSASLAISGLQSEDEADYYCAAWDDSLNGHVVFGGGTKVTVLGAAAENLYF
N.A.
19.097536
0
273
0
246
0
264
0
0
scfvh1
N.A.
homo sapiens
N.A.
G
protein
serine/threonine-protein kinase sik3
homo sapiens
62
17
0.59
H_only
train
8r4o_J
8r4o
salt inducible kinase 3 in complex with inhibitor
yes
ligase
2023-11-14
2024-03-27
x-ray diffraction
2.73
0.244
0.214
38508313
10.1016/j.jbc.2024.107201
0
auth_asym_id
scFv
N.A.
N.A.
J
N.A.
EVQLVQSGAGVKKPGSSVKVSCKSSGGTSGSSAVSWIRQAPGQGVEWMGGITSIFGPANYAQKFQDRLKITADKATNTVYMELSGLTFEDTAVYYCARVGDYNFWNGHYRSGYYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNTQRPSGVPDRFSGSKSATSASLAISGLQSEDEADYYCAAWDDSLNGHVVFGGGTKVTVLGAAAENLYFQGSHHHHHH
N.A.
EVQLVQSGAGVKKPGSSVKVSCKSSGGTSGSSAVSWIRQAPGQGVEWMGGITSIFGPANYAQKFQDRLKITADKATNTVYMELSGLTFEDTAVYYCARVGDYNFWNGHYRSGYYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNTQRPSGVPDRFSGSKSATSASLAISGLQSEDEADYYCAAWDDSLNGHVVFGGGTKVTVLGAAAENLYF
N.A.
18.701347
0
273
0
243
0
264
0
0
scfvh1
N.A.
homo sapiens
N.A.
I
protein
serine/threonine-protein kinase sik3
homo sapiens
61
16
0.55
H_only
train
8r4o_L
8r4o
salt inducible kinase 3 in complex with inhibitor
yes
ligase
2023-11-14
2024-03-27
x-ray diffraction
2.73
0.244
0.214
38508313
10.1016/j.jbc.2024.107201
0
auth_asym_id
scFv
N.A.
N.A.
L
N.A.
EVQLVQSGAGVKKPGSSVKVSCKSSGGTSGSSAVSWIRQAPGQGVEWMGGITSIFGPANYAQKFQDRLKITADKATNTVYMELSGLTFEDTAVYYCARVGDYNFWNGHYRSGYYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNTQRPSGVPDRFSGSKSATSASLAISGLQSEDEADYYCAAWDDSLNGHVVFGGGTKVTVLGAAAENLYFQGSHHHHHH
N.A.
EVQLVQSGAGVKKPGSSVKVSCKSSGGTSGSSAVSWIRQAPGQGVEWMGGITSIFGPANYAQKFQDRLKITADKATNTVYMELSGLTFEDTAVYYCARVGDYNFWNGHYRSGYYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNTQRPSGVPDRFSGSKSATSASLAISGLQSEDEADYYCAAWDDSLNGHVVFGGGTKVTVLGAAAENLYF
N.A.
19.048698
0
273
0
243
0
264
0
0
scfvh1
N.A.
homo sapiens
N.A.
K
protein
serine/threonine-protein kinase sik3
homo sapiens
62
17
0.59
H_only
train
8r4u_B
8r4u
structure of salt-inducible kinase 3 with inhibitors
yes
ligase
2023-11-14
2024-03-27
x-ray diffraction
2.42
0.265
0.228
38508313
10.1016/j.jbc.2024.107201
0
auth_asym_id
scFv
N.A.
N.A.
B
N.A.
EVQLVQSGAGVKKPGSSVKVSCKSSGGTSGSSAVSWIRQAPGQGVEWMGGITSIFGPANYAQKFQDRLKITADKATNTVYMELSGLTFEDTAVYYCARVGDYNFWNGHYRSGYYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNTQRPSGVPDRFSGSKSATSASLAISGLQSEDEADYYCAAWDDSLNGHVVFGGGTKVTVLGAAAENLYFQ
N.A.
EVQLVQSGAGVKKPGSSVKVSCKSSGGTSGSSAVSWIRQAPGQGVEWMGGITSIFGPANYAQKFQDRLKITADKATNTVYMELSGLTFEDTAVYYCARVGDYNFWNGHYRSGYYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNTQRPSGVPDRFSGSKSATSASLAISGLQSEDEADYYCAAWDDSLNGHVVFGGGTKVTVL
N.A.
17.493797
0
265
0
236
0
255
0
0
scfvh1
N.A.
homo sapiens
N.A.
A;E
protein;protein
serine/threonine-protein kinase sik3;serine/threonine-protein kinase sik3
homo sapiens;homo sapiens
61;18
17;5
0.59;0.45
H_only
train
8r4u_D
8r4u
structure of salt-inducible kinase 3 with inhibitors
yes
ligase
2023-11-14
2024-03-27
x-ray diffraction
2.42
0.265
0.228
38508313
10.1016/j.jbc.2024.107201
0
auth_asym_id
scFv
N.A.
N.A.
D
N.A.
EVQLVQSGAGVKKPGSSVKVSCKSSGGTSGSSAVSWIRQAPGQGVEWMGGITSIFGPANYAQKFQDRLKITADKATNTVYMELSGLTFEDTAVYYCARVGDYNFWNGHYRSGYYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNTQRPSGVPDRFSGSKSATSASLAISGLQSEDEADYYCAAWDDSLNGHVVFGGGTKVTVLGAAAENLYFQ
N.A.
EVQLVQSGAGVKKPGSSVKVSCKSSGGTSGSSAVSWIRQAPGQGVEWMGGITSIFGPANYAQKFQDRLKITADKATNTVYMELSGLTFEDTAVYYCARVGDYNFWNGHYRSGYYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNTQRPSGVPDRFSGSKSATSASLAISGLQSEDEADYYCAAWDDSLNGHVVFGGGTKVTVL
N.A.
17.47547
0
265
0
234
0
255
0
0
scfvh1
N.A.
homo sapiens
N.A.
C
protein
serine/threonine-protein kinase sik3
homo sapiens
58
16
0.57
H_only
train
8r4u_F
8r4u
structure of salt-inducible kinase 3 with inhibitors
yes
ligase
2023-11-14
2024-03-27
x-ray diffraction
2.42
0.265
0.228
38508313
10.1016/j.jbc.2024.107201
0
auth_asym_id
scFv
N.A.
N.A.
F
N.A.
EVQLVQSGAGVKKPGSSVKVSCKSSGGTSGSSAVSWIRQAPGQGVEWMGGITSIFGPANYAQKFQDRLKITADKATNTVYMELSGLTFEDTAVYYCARVGDYNFWNGHYRSGYYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNTQRPSGVPDRFSGSKSATSASLAISGLQSEDEADYYCAAWDDSLNGHVVFGGGTKVTVLGAAAENLYFQ
N.A.
EVQLVQSGAGVKKPGSSVKVSCKSSGGTSGSSAVSWIRQAPGQGVEWMGGITSIFGPANYAQKFQDRLKITADKATNTVYMELSGLTFEDTAVYYCARVGDYNFWNGHYRSGYYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNTQRPSGVPDRFSGSKSATSASLAISGLQSEDEADYYCAAWDDSLNGHVVFGGGTKVTVL
N.A.
17.47207
0
265
0
232
0
255
0
0
scfvh1
N.A.
homo sapiens
N.A.
E
protein
serine/threonine-protein kinase sik3
homo sapiens
59
16
0.57
H_only
train
8r4u_H
8r4u
structure of salt-inducible kinase 3 with inhibitors
yes
ligase
2023-11-14
2024-03-27
x-ray diffraction
2.42
0.265
0.228
38508313
10.1016/j.jbc.2024.107201
0
auth_asym_id
scFv
N.A.
N.A.
H
N.A.
EVQLVQSGAGVKKPGSSVKVSCKSSGGTSGSSAVSWIRQAPGQGVEWMGGITSIFGPANYAQKFQDRLKITADKATNTVYMELSGLTFEDTAVYYCARVGDYNFWNGHYRSGYYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNTQRPSGVPDRFSGSKSATSASLAISGLQSEDEADYYCAAWDDSLNGHVVFGGGTKVTVLGAAAENLYFQ
N.A.
EVQLVQSGAGVKKPGSSVKVSCKSSGGTSGSSAVSWIRQAPGQGVEWMGGITSIFGPANYAQKFQDRLKITADKATNTVYMELSGLTFEDTAVYYCARVGDYNFWNGHYRSGYYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNTQRPSGVPDRFSGSKSATSASLAISGLQSEDEADYYCAAWDDSLNGHVVFGGGTKVTVL
N.A.
17.493088
0
265
0
235
0
255
0
0
scfvh1
N.A.
homo sapiens
N.A.
G
protein
serine/threonine-protein kinase sik3
homo sapiens
61
17
0.59
H_only
train
8x3l_S
8x3l
cryo-em structure of cb2-g protein complex
no
membrane protein/immune system
2023-11-14
2024-11-20
electron microscopy
3.13
N.A.
N.A.
39024109
10.1073/pnas.2401091121
0
auth_asym_id
scFv
N.A.
N.A.
S
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAENLYFQGHHHHHHHH
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.668633
0
266
0
230
0
246
0
0
scfv16
N.A.
mus musculus
N.A.
B;A
protein;protein
guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1
homo sapiens;homo sapiens
22;33
9;21
0.9;0.95
H_only
train
8uzp_A_B
8uzp
crystal structure of the computationally designed influenza hemagglutinin epitope scaffold stem_mimetic_01 bound by antibody cr9501
no
immune system
2023-11-16
2025-03-19
x-ray diffraction
2.71
0.246
0.199
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV1
IGLV1
A
B
QVQLVQSGAEVKKPGSSVKVSCKSSGGTSNNYAISWVRQAPGQGLDWMGGISPIFGSTAYAQKFQGRVTISADIFSNTAYMELNSLTSEDTAVYFCARHGNYYYYSGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGSENLYFQGSWSHPQFEKGGGSGGGSGGGSWSHPQFEK
QSALTQPPAVSGTPGQRVTISCSGSDSNIGRRSVNWYQQFPGTAPKLLIYSNDQRPSVVPDRFSGSKSGTSASLAISGLQSEDEAEYYCAAWDDSLKGAVFGGGTQLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVQSGAEVKKPGSSVKVSCKSSGGTSNNYAISWVRQAPGQGLDWMGGISPIFGSTAYAQKFQGRVTISADIFSNTAYMELNSLTSEDTAVYFCARHGNYYYYSGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
SALTQPPAVSGTPGQRVTISCSGSDSNIGRRSVNWYQQFPGTAPKLLIYSNDQRPSVVPDRFSGSKSGTSASLAISGLQSEDEAEYYCAAWDDSLKGAVFGGGTQLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
22.429283
23.696596
264
216
214
212
221
212
87
cr9114 fab heavy chain
cr9114 fab light chain
homo sapiens
homo sapiens
E
protein
stem_mimetic_01
mus musculus
38
13
0.76
HL
train
8uzp_H_L
8uzp
crystal structure of the computationally designed influenza hemagglutinin epitope scaffold stem_mimetic_01 bound by antibody cr9501
no
immune system
2023-11-16
2025-03-19
x-ray diffraction
2.71
0.246
0.199
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV1
IGLV1
H
L
QVQLVQSGAEVKKPGSSVKVSCKSSGGTSNNYAISWVRQAPGQGLDWMGGISPIFGSTAYAQKFQGRVTISADIFSNTAYMELNSLTSEDTAVYFCARHGNYYYYSGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGSENLYFQGSWSHPQFEKGGGSGGGSGGGSWSHPQFEK
QSALTQPPAVSGTPGQRVTISCSGSDSNIGRRSVNWYQQFPGTAPKLLIYSNDQRPSVVPDRFSGSKSGTSASLAISGLQSEDEAEYYCAAWDDSLKGAVFGGGTQLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVQSGAEVKKPGSSVKVSCKSSGGTSNNYAISWVRQAPGQGLDWMGGISPIFGSTAYAQKFQGRVTISADIFSNTAYMELNSLTSEDTAVYFCARHGNYYYYSGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
SALTQPPAVSGTPGQRVTISCSGSDSNIGRRSVNWYQQFPGTAPKLLIYSNDQRPSVVPDRFSGSKSGTSASLAISGLQSEDEAEYYCAAWDDSLKGAVFGGGTQLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
22.35153
23.803587
264
216
214
212
221
212
90
cr9114 fab heavy chain
cr9114 fab light chain
homo sapiens
homo sapiens
M
protein
stem_mimetic_01
mus musculus
32
12
0.86
HL
train
8v13_H_L
8v13
crystal structure of black mamba toxin in complex with centi-snx-b03 antibody
no
antitoxin/immune system
2023-11-19
2025-01-29
x-ray diffraction
1.8
0.229
0.181
40318633
10.1016/j.cell.2025.03.050
0
auth_asym_id
FabH:FabL
IGHV3
IGLV3
H
L
QVQLQESGGGVVRPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDSSKNTLYLQINSLRAEDTALYYCAREGDYDSMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ
SQSVVTQPPSVSVAPGKTARITCGGNNIGSKSVHWYQQKPGQAPVLVVFDDSARPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDNNSDDVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLQESGGGVVRPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDSSKNTLYLQINSLRAEDTALYYCAREGDYDSMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ
SVVTQPPSVSVAPGKTARITCGGNNIGSKSVHWYQQKPGQAPVLVVFDDSARPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDNNSDDVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE
23.988886
21.15021
230
215
229
211
229
211
107
centi-snx-b03 fab heavy chain
centi-snx-b03 fab light chain
homo sapiens
homo sapiens
T;t
protein;protein
short neurotoxin 1;short neurotoxin 1
dendraspis polylepis polylepis;dendraspis polylepis polylepis
37;27
20;9
0.77;0.69
HL
train
8v13_h_l
8v13
crystal structure of black mamba toxin in complex with centi-snx-b03 antibody
no
antitoxin/immune system
2023-11-19
2025-01-29
x-ray diffraction
1.8
0.229
0.181
40318633
10.1016/j.cell.2025.03.050
0
auth_asym_id
FabH:FabL
IGHV3
IGLV3
h
l
QVQLQESGGGVVRPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDSSKNTLYLQINSLRAEDTALYYCAREGDYDSMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ
SQSVVTQPPSVSVAPGKTARITCGGNNIGSKSVHWYQQKPGQAPVLVVFDDSARPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDNNSDDVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLQESGGGVVRPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDSSKNTLYLQINSLRAEDTALYYCAREGDYDSMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
SVVTQPPSVSVAPGKTARITCGGNNIGSKSVHWYQQKPGQAPVLVVFDDSARPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDNNSDDVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE
23.358295
20.62572
230
215
220
211
220
211
97
centi-snx-b03 fab heavy chain
centi-snx-b03 fab light chain
homo sapiens
homo sapiens
T;t
protein;protein
short neurotoxin 1;short neurotoxin 1
dendraspis polylepis polylepis;dendraspis polylepis polylepis
15;33
6;18
0.86;0.82
HL
train
8r61_A_B
8r61
structure of ige delta epsilon 3-4 in complex with a kappa binding nanobody
no
immune system
2023-11-20
2023-11-29
x-ray diffraction
3.1
0.275
0.232
N.A.
10.1101/2023.02.17.528943
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
A
B
QSLEESGGRLVTPGTPLTLTCTVSGFSLSTYNIHWVRQAPGKGLEWIGVIDTGGGTYFASWAKGRFAISKTSSTTVDLKMTSLTAADTATYFCAKGFDYSASTNLWGPGTLVTISSASTQSPSVFPLTRCCKNIPSNATSVTLGCLATGYFPEPVMVTWDTGSLNGTTMTLPATTLTLSGHYATISLLTVSGAWAKQMFTCRVAHTPSSTDWVDNKTFSVCSRDFTPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTINITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFED...
ELDMTQTPSSVSAPVGGSVTINCQSSQSVYGNNYLAWYQQKAGQPPKLLIYRASTLASGAPSRFKGSGSGTQFTLTISDLESDDAATYYCLGYYNGVINVFGGGTNVEIKRTVGAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QSLEESGGRLVTPGTPLTLTCTVSGFSLSTYNIHWVRQAPGKGLEWIGVIDTGGGTYFASWAKGRFAISKTSSTTVDLKMTSLTAADTATYFCAKGFDYSASTNLWGPGTLVTISSASTQSPSVFPLTRCCKNIPSNATSVTLGCLATGYFPEPVMVTWDTGSLNGTTMTLPATTLTLSGHYATISLLTVSGAWAKQMFTCRVAHTPSSTDWVDNKTFSVCSR
ELDMTQTPSSVSAPVGGSVTINCQSSQSVYGNNYLAWYQQKAGQPPKLLIYRASTLASGAPSRFKGSGSGTQFTLTISDLESDDAATYYCLGYYNGVINVFGGGTNVEIKRTVGAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
22.058758
23.42208
346
217
223
217
223
217
100
immunoglobulin e vh-ceps1-ceps1
hmm5 ige light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
8r61_C
8r61
structure of ige delta epsilon 3-4 in complex with a kappa binding nanobody
no
immune system
2023-11-20
2023-11-29
x-ray diffraction
3.1
0.275
0.232
N.A.
10.1101/2023.02.17.528943
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
EVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVATARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS
N.A.
EVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVATARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS
N.A.
13.654465
0
120
0
120
0
120
0
0
kappa binding nanobody
N.A.
lama glama
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
8r61_D_E
8r61
structure of ige delta epsilon 3-4 in complex with a kappa binding nanobody
no
immune system
2023-11-20
2023-11-29
x-ray diffraction
3.1
0.275
0.232
N.A.
10.1101/2023.02.17.528943
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
D
E
QSLEESGGRLVTPGTPLTLTCTVSGFSLSTYNIHWVRQAPGKGLEWIGVIDTGGGTYFASWAKGRFAISKTSSTTVDLKMTSLTAADTATYFCAKGFDYSASTNLWGPGTLVTISSASTQSPSVFPLTRCCKNIPSNATSVTLGCLATGYFPEPVMVTWDTGSLNGTTMTLPATTLTLSGHYATISLLTVSGAWAKQMFTCRVAHTPSSTDWVDNKTFSVCSRDFTPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTINITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFED...
ELDMTQTPSSVSAPVGGSVTINCQSSQSVYGNNYLAWYQQKAGQPPKLLIYRASTLASGAPSRFKGSGSGTQFTLTISDLESDDAATYYCLGYYNGVINVFGGGTNVEIKRTVGAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QSLEESGGRLVTPGTPLTLTCTVSGFSLSTYNIHWVRQAPGKGLEWIGVIDTGGGTYFASWAKGRFAISKTSSTTVDLKMTSLTAADTATYFCAKGFDYSASTNLWGPGTLVTISSASTQSPSVFPLTRCCKNIPSNATSVTLGCLATGYFPEPVMVTWDTGSLNGTTMTLPATTLTLSGHYATISLLTVSGAWAKQMFTCRVAHTPSSTDWVDNKTFSVCSR
ELDMTQTPSSVSAPVGGSVTINCQSSQSVYGNNYLAWYQQKAGQPPKLLIYRASTLASGAPSRFKGSGSGTQFTLTISDLESDDAATYYCLGYYNGVINVFGGGTNVEIKRTVGAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
22.106714
23.447008
346
217
223
217
223
217
97
immunoglobulin e vh-ceps1-ceps1
hmm5 ige light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
8r61_F
8r61
structure of ige delta epsilon 3-4 in complex with a kappa binding nanobody
no
immune system
2023-11-20
2023-11-29
x-ray diffraction
3.1
0.275
0.232
N.A.
10.1101/2023.02.17.528943
0
auth_asym_id
VHH
IGHV3
N.A.
F
N.A.
EVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVATARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS
N.A.
EVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVATARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS
N.A.
13.663239
0
120
0
120
0
120
0
0
kappa binding nanobody
N.A.
lama glama
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
8r61_G_H
8r61
structure of ige delta epsilon 3-4 in complex with a kappa binding nanobody
no
immune system
2023-11-20
2023-11-29
x-ray diffraction
3.1
0.275
0.232
N.A.
10.1101/2023.02.17.528943
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
G
H
QSLEESGGRLVTPGTPLTLTCTVSGFSLSTYNIHWVRQAPGKGLEWIGVIDTGGGTYFASWAKGRFAISKTSSTTVDLKMTSLTAADTATYFCAKGFDYSASTNLWGPGTLVTISSASTQSPSVFPLTRCCKNIPSNATSVTLGCLATGYFPEPVMVTWDTGSLNGTTMTLPATTLTLSGHYATISLLTVSGAWAKQMFTCRVAHTPSSTDWVDNKTFSVCSRDFTPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTINITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFED...
ELDMTQTPSSVSAPVGGSVTINCQSSQSVYGNNYLAWYQQKAGQPPKLLIYRASTLASGAPSRFKGSGSGTQFTLTISDLESDDAATYYCLGYYNGVINVFGGGTNVEIKRTVGAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QSLEESGGRLVTPGTPLTLTCTVSGFSLSTYNIHWVRQAPGKGLEWIGVIDTGGGTYFASWAKGRFAISKTSSTTVDLKMTSLTAADTATYFCAKGFDYSASTNLWGPGTLVTISSASTQSPSVFPLTRCCKNIPSNATSVTLGCLATGYFPEPVMVTWDTGSLNGTTMTLPATTLTLSGHYATISLLTVSGAWAKQMFTCRVAHTPSSTDWVDNKTFSVCSR
ELDMTQTPSSVSAPVGGSVTINCQSSQSVYGNNYLAWYQQKAGQPPKLLIYRASTLASGAPSRFKGSGSGTQFTLTISDLESDDAATYYCLGYYNGVINVFGGGTNVEIKRTVGAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
21.940248
23.324682
346
217
223
217
223
217
99
immunoglobulin e vh-ceps1-ceps1
hmm5 ige light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
8r61_I
8r61
structure of ige delta epsilon 3-4 in complex with a kappa binding nanobody
no
immune system
2023-11-20
2023-11-29
x-ray diffraction
3.1
0.275
0.232
N.A.
10.1101/2023.02.17.528943
0
auth_asym_id
VHH
IGHV3
N.A.
I
N.A.
EVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVATARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS
N.A.
EVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVATARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS
N.A.
13.671163
0
120
0
120
0
120
0
0
kappa binding nanobody
N.A.
lama glama
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
8r61_J_K
8r61
structure of ige delta epsilon 3-4 in complex with a kappa binding nanobody
no
immune system
2023-11-20
2023-11-29
x-ray diffraction
3.1
0.275
0.232
N.A.
10.1101/2023.02.17.528943
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
J
K
QSLEESGGRLVTPGTPLTLTCTVSGFSLSTYNIHWVRQAPGKGLEWIGVIDTGGGTYFASWAKGRFAISKTSSTTVDLKMTSLTAADTATYFCAKGFDYSASTNLWGPGTLVTISSASTQSPSVFPLTRCCKNIPSNATSVTLGCLATGYFPEPVMVTWDTGSLNGTTMTLPATTLTLSGHYATISLLTVSGAWAKQMFTCRVAHTPSSTDWVDNKTFSVCSRDFTPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTINITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFED...
ELDMTQTPSSVSAPVGGSVTINCQSSQSVYGNNYLAWYQQKAGQPPKLLIYRASTLASGAPSRFKGSGSGTQFTLTISDLESDDAATYYCLGYYNGVINVFGGGTNVEIKRTVGAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QSLEESGGRLVTPGTPLTLTCTVSGFSLSTYNIHWVRQAPGKGLEWIGVIDTGGGTYFASWAKGRFAISKTSSTTVDLKMTSLTAADTATYFCAKGFDYSASTNLWGPGTLVTISSASTQSPSVFPLTRCCKNIPSNATSVTLGCLATGYFPEPVMVTWDTGSLNGTTMTLPATTLTLSGHYATISLLTVSGAWAKQMFTCRVAHTPSSTDWVDNKTFSVCSR
ELDMTQTPSSVSAPVGGSVTINCQSSQSVYGNNYLAWYQQKAGQPPKLLIYRASTLASGAPSRFKGSGSGTQFTLTISDLESDDAATYYCLGYYNGVINVFGGGTNVEIKRTVGAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
22.00058
23.336016
346
217
223
217
223
217
101
immunoglobulin e vh-ceps1-ceps1
hmm5 ige light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
8r61_L
8r61
structure of ige delta epsilon 3-4 in complex with a kappa binding nanobody
no
immune system
2023-11-20
2023-11-29
x-ray diffraction
3.1
0.275
0.232
N.A.
10.1101/2023.02.17.528943
0
auth_asym_id
VHH
IGHV3
N.A.
L
N.A.
EVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVATARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS
N.A.
EVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVATARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS
N.A.
13.654866
0
120
0
120
0
120
0
0
kappa binding nanobody
N.A.
lama glama
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
8r61_M_N
8r61
structure of ige delta epsilon 3-4 in complex with a kappa binding nanobody
no
immune system
2023-11-20
2023-11-29
x-ray diffraction
3.1
0.275
0.232
N.A.
10.1101/2023.02.17.528943
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
M
N
QSLEESGGRLVTPGTPLTLTCTVSGFSLSTYNIHWVRQAPGKGLEWIGVIDTGGGTYFASWAKGRFAISKTSSTTVDLKMTSLTAADTATYFCAKGFDYSASTNLWGPGTLVTISSASTQSPSVFPLTRCCKNIPSNATSVTLGCLATGYFPEPVMVTWDTGSLNGTTMTLPATTLTLSGHYATISLLTVSGAWAKQMFTCRVAHTPSSTDWVDNKTFSVCSRDFTPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTINITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFED...
ELDMTQTPSSVSAPVGGSVTINCQSSQSVYGNNYLAWYQQKAGQPPKLLIYRASTLASGAPSRFKGSGSGTQFTLTISDLESDDAATYYCLGYYNGVINVFGGGTNVEIKRTVGAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QSLEESGGRLVTPGTPLTLTCTVSGFSLSTYNIHWVRQAPGKGLEWIGVIDTGGGTYFASWAKGRFAISKTSSTTVDLKMTSLTAADTATYFCAKGFDYSASTNLWGPGTLVTISSASTQSPSVFPLTRCCKNIPSNATSVTLGCLATGYFPEPVMVTWDTGSLNGTTMTLPATTLTLSGHYATISLLTVSGAWAKQMFTCRVAHTPSSTDWVDNKTFSVCSR
ELDMTQTPSSVSAPVGGSVTINCQSSQSVYGNNYLAWYQQKAGQPPKLLIYRASTLASGAPSRFKGSGSGTQFTLTISDLESDDAATYYCLGYYNGVINVFGGGTNVEIKRTVGAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
21.92429
23.323336
346
217
223
217
223
217
100
immunoglobulin e vh-ceps1-ceps1
hmm5 ige light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
8r61_O
8r61
structure of ige delta epsilon 3-4 in complex with a kappa binding nanobody
no
immune system
2023-11-20
2023-11-29
x-ray diffraction
3.1
0.275
0.232
N.A.
10.1101/2023.02.17.528943
0
auth_asym_id
VHH
IGHV3
N.A.
O
N.A.
EVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVATARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS
N.A.
EVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVATARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS
N.A.
13.649565
0
120
0
120
0
120
0
0
kappa binding nanobody
N.A.
lama glama
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
8r61_P_Q
8r61
structure of ige delta epsilon 3-4 in complex with a kappa binding nanobody
no
immune system
2023-11-20
2023-11-29
x-ray diffraction
3.1
0.275
0.232
N.A.
10.1101/2023.02.17.528943
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
P
Q
QSLEESGGRLVTPGTPLTLTCTVSGFSLSTYNIHWVRQAPGKGLEWIGVIDTGGGTYFASWAKGRFAISKTSSTTVDLKMTSLTAADTATYFCAKGFDYSASTNLWGPGTLVTISSASTQSPSVFPLTRCCKNIPSNATSVTLGCLATGYFPEPVMVTWDTGSLNGTTMTLPATTLTLSGHYATISLLTVSGAWAKQMFTCRVAHTPSSTDWVDNKTFSVCSRDFTPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTINITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFED...
ELDMTQTPSSVSAPVGGSVTINCQSSQSVYGNNYLAWYQQKAGQPPKLLIYRASTLASGAPSRFKGSGSGTQFTLTISDLESDDAATYYCLGYYNGVINVFGGGTNVEIKRTVGAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QSLEESGGRLVTPGTPLTLTCTVSGFSLSTYNIHWVRQAPGKGLEWIGVIDTGGGTYFASWAKGRFAISKTSSTTVDLKMTSLTAADTATYFCAKGFDYSASTNLWGPGTLVTISSASTQSPSVFPLTRCCKNIPSNATSVTLGCLATGYFPEPVMVTWDTGSLNGTTMTLPATTLTLSGHYATISLLTVSGAWAKQMFTCRVAHTPSSTDWVDNKTFSVCSR
ELDMTQTPSSVSAPVGGSVTINCQSSQSVYGNNYLAWYQQKAGQPPKLLIYRASTLASGAPSRFKGSGSGTQFTLTISDLESDDAATYYCLGYYNGVINVFGGGTNVEIKRTVGAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
21.879797
23.347303
346
217
223
217
223
217
99
immunoglobulin e vh-ceps1-ceps1
hmm5 ige light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
8r61_R
8r61
structure of ige delta epsilon 3-4 in complex with a kappa binding nanobody
no
immune system
2023-11-20
2023-11-29
x-ray diffraction
3.1
0.275
0.232
N.A.
10.1101/2023.02.17.528943
0
auth_asym_id
VHH
IGHV3
N.A.
R
N.A.
EVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVATARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS
N.A.
EVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVATARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS
N.A.
13.693591
0
120
0
120
0
120
0
0
kappa binding nanobody
N.A.
lama glama
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
8v2e_A_B
8v2e
crystal structure of b055 scaffold boost immunogen in complex with a mature 10e8 fab
no
immune system
2023-11-22
2024-06-12
x-ray diffraction
2.62
0.276
0.228
38816615
10.1038/s41590-024-01833-w
0
auth_asym_id
FabH:FabL
IGHV3
IGLV3
A
B
EVQLVESGGGLVKPGGSLRLSCSASGFDFDNAWMTWVRQPPGKGLEWVGRITGPGEGWSVDYAAPVEGRFTISRLNSINFLYLEMNNLRMEDSGLYFCARTGKYYDFWSGYPPGEEYFQDWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
SYELTQETGVSVALGRTVTITCRGDSLRSHYASWYQKKPGQAPILLFYGKNNRPSGVPDRFSGSASGNRASLTISGAQAEDDAEYYCSSRDKSGSRLSVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
EVQLVESGGGLVKPGGSLRLSCSASGFDFDNAWMTWVRQPPGKGLEWVGRITGPGEGWSVDYAAPVEGRFTISRLNSINFLYLEMNNLRMEDSGLYFCARTGKYYDFWSGYPPGEEYFQDWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
YELTQETGVSVALGRTVTITCRGDSLRSHYASWYQKKPGQAPILLFYGKNNRPSGVPDRFSGSASGNRASLTISGAQAEDDAEYYCSSRDKSGSRLSVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
23.786871
22.584314
234
215
223
207
232
211
111
antibody 10e8 fab heavy chain
antibody 10e8 fab light chain
homo sapiens
homo sapiens
C
protein
10e8 epitope scaffold b055
synthetic construct
39
19
1
HL
train
8v2e_D_E
8v2e
crystal structure of b055 scaffold boost immunogen in complex with a mature 10e8 fab
no
immune system
2023-11-22
2024-06-12
x-ray diffraction
2.62
0.276
0.228
38816615
10.1038/s41590-024-01833-w
0
auth_asym_id
FabH:FabL
IGHV3
IGLV3
D
E
EVQLVESGGGLVKPGGSLRLSCSASGFDFDNAWMTWVRQPPGKGLEWVGRITGPGEGWSVDYAAPVEGRFTISRLNSINFLYLEMNNLRMEDSGLYFCARTGKYYDFWSGYPPGEEYFQDWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
SYELTQETGVSVALGRTVTITCRGDSLRSHYASWYQKKPGQAPILLFYGKNNRPSGVPDRFSGSASGNRASLTISGAQAEDDAEYYCSSRDKSGSRLSVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
EVQLVESGGGLVKPGGSLRLSCSASGFDFDNAWMTWVRQPPGKGLEWVGRITGPGEGWSVDYAAPVEGRFTISRLNSINFLYLEMNNLRMEDSGLYFCARTGKYYDFWSGYPPGEEYFQDWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
YELTQETGVSVALGRTVTITCRGDSLRSHYASWYQKKPGQAPILLFYGKNNRPSGVPDRFSGSASGNRASLTISGAQAEDDAEYYCSSRDKSGSRLSVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP
23.186535
22.320492
234
215
212
205
232
210
105
antibody 10e8 fab heavy chain
antibody 10e8 fab light chain
homo sapiens
homo sapiens
F
protein
10e8 epitope scaffold b055
synthetic construct
35
17
1
HL
train
8x79_N
8x79
mre-269 bound prostacyclin receptor g protein complex
no
signaling protein
2023-11-23
2024-03-06
electron microscopy
2.41
N.A.
N.A.
38335293
10.1126/sciadv.adk5184
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
13.747152
0
134
0
128
0
128
0
0
nanobody35
N.A.
homo sapiens
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(s) subunit alpha isoforms short,gnas complex locus,gnas complex locus;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
41;33
13;11
0.65;0.69
H_only
train
8x7a_N
8x7a
treprostinil bound prostacyclin receptor g protein complex
no
signaling protein
2023-11-23
2024-03-06
electron microscopy
2.56
N.A.
N.A.
38335293
10.1126/sciadv.adk5184
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
13.845634
0
134
0
128
0
128
0
0
nanobody35
N.A.
homo sapiens
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(s) subunit alpha isoforms short,gnas complex locus;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
48;29
16;10
0.62;0.67
H_only
train
8x7n_B
8x7n
cell-cell adhesion nanobody/antigen pair
no
antimicrobial protein
2023-11-24
2024-07-17
x-ray diffraction
3.67
0.285
0.26
39095377
10.1038/s41467-024-51017-1
0
auth_asym_id
VH
IGHV3
N.A.
B
N.A.
MQVQLQESGGGLVQAGGSLRLSCAASGTIFDGVDMGWYRQAPGKEREFVAGITAGSSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAYPLDEIGSHDPHSYWGQGTQVTVSS
N.A.
QLQESGGGLVQAGGSLRLSCAASGTIFDGVDMGWYRQAPGKEREFVAGITAGSSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAYPLDEIGSHDPHSYWGQGTQVTVSS
N.A.
14.128639
0
123
0
120
0
120
0
0
nb-tran
N.A.
synthetic construct
N.A.
A
protein
conjugative transfer: aggregate stability
salmonella enterica subsp. enterica serovar typhimurium str. lt2
39
8
0.36
H_only
train
8x7n_D
8x7n
cell-cell adhesion nanobody/antigen pair
no
antimicrobial protein
2023-11-24
2024-07-17
x-ray diffraction
3.67
0.285
0.26
39095377
10.1038/s41467-024-51017-1
0
auth_asym_id
VH
IGHV3
N.A.
D
N.A.
MQVQLQESGGGLVQAGGSLRLSCAASGTIFDGVDMGWYRQAPGKEREFVAGITAGSSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAYPLDEIGSHDPHSYWGQGTQVTVSS
N.A.
QLQESGGGLVQAGGSLRLSCAASGTIFDGVDMGWYRQAPGKEREFVAGITAGSSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAYPLDEIGSHDPHSYWGQGTQVTVSS
N.A.
14.143584
0
123
0
120
0
120
0
0
nb-tran
N.A.
synthetic construct
N.A.
C
protein
conjugative transfer: aggregate stability
salmonella enterica subsp. enterica serovar typhimurium str. lt2
39
8
0.36
H_only
train
8x7n_F
8x7n
cell-cell adhesion nanobody/antigen pair
no
antimicrobial protein
2023-11-24
2024-07-17
x-ray diffraction
3.67
0.285
0.26
39095377
10.1038/s41467-024-51017-1
0
auth_asym_id
VH
IGHV3
N.A.
F
N.A.
MQVQLQESGGGLVQAGGSLRLSCAASGTIFDGVDMGWYRQAPGKEREFVAGITAGSSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAYPLDEIGSHDPHSYWGQGTQVTVSS
N.A.
QLQESGGGLVQAGGSLRLSCAASGTIFDGVDMGWYRQAPGKEREFVAGITAGSSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAYPLDEIGSHDPHSYWGQGTQVTVSS
N.A.
14.142946
0
123
0
120
0
120
0
0
nb-tran
N.A.
synthetic construct
N.A.
E
protein
conjugative transfer: aggregate stability
salmonella enterica subsp. enterica serovar typhimurium str. lt2
38
8
0.38
H_only
train
8x7n_H
8x7n
cell-cell adhesion nanobody/antigen pair
no
antimicrobial protein
2023-11-24
2024-07-17
x-ray diffraction
3.67
0.285
0.26
39095377
10.1038/s41467-024-51017-1
0
auth_asym_id
VH
IGHV3
N.A.
H
N.A.
MQVQLQESGGGLVQAGGSLRLSCAASGTIFDGVDMGWYRQAPGKEREFVAGITAGSSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAYPLDEIGSHDPHSYWGQGTQVTVSS
N.A.
QLQESGGGLVQAGGSLRLSCAASGTIFDGVDMGWYRQAPGKEREFVAGITAGSSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAYPLDEIGSHDPHSYWGQGTQVTVSS
N.A.
14.159943
0
123
0
120
0
120
0
0
nb-tran
N.A.
synthetic construct
N.A.
G
protein
conjugative transfer: aggregate stability
salmonella enterica subsp. enterica serovar typhimurium str. lt2
40
8
0.35
H_only
train
8x7n_J
8x7n
cell-cell adhesion nanobody/antigen pair
no
antimicrobial protein
2023-11-24
2024-07-17
x-ray diffraction
3.67
0.285
0.26
39095377
10.1038/s41467-024-51017-1
0
auth_asym_id
VH
IGHV3
N.A.
J
N.A.
MQVQLQESGGGLVQAGGSLRLSCAASGTIFDGVDMGWYRQAPGKEREFVAGITAGSSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAYPLDEIGSHDPHSYWGQGTQVTVSS
N.A.
QLQESGGGLVQAGGSLRLSCAASGTIFDGVDMGWYRQAPGKEREFVAGITAGSSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAYPLDEIGSHDPHSYWGQGTQVTVSS
N.A.
14.146159
0
123
0
120
0
120
0
0
nb-tran
N.A.
synthetic construct
N.A.
I
protein
conjugative transfer: aggregate stability
salmonella enterica subsp. enterica serovar typhimurium str. lt2
32
8
0.47
H_only
train
8r80_A_B
8r80
sars-cov-2 delta rbd in complex with xbb-9 fab and an anti-fab nanobody
yes
viral protein
2023-11-27
2024-05-08
x-ray diffraction
4.03
0.313
0.268
38723626
10.1016/j.xcrm.2024.101553
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
A
B
QVQLVETGGGLVQPGGSLRLSCEASEIIVSANYMTWVRQAPGKGLEWVSLIYPGGTTYLSDSLKGRFTVSRDNSKNTMNLEMNSLRAGDTAVYYCARLIVGGIAGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
AIQLTQSPSSLSASVGDRVTITCQATHDINKFLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGFGTTFTFTISSLQPEDIATYFCHQYENIPPIFGPGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLVETGGGLVQPGGSLRLSCEASEIIVSANYMTWVRQAPGKGLEWVSLIYPGGTTYLSDSLKGRFTVSRDNSKNTMNLEMNSLRAGDTAVYYCARLIVGGIAGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS
AIQLTQSPSSLSASVGDRVTITCQATHDINKFLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGFGTTFTFTISSLQPEDIATYFCHQYENIPPIFGPGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
20.650772
23.408682
224
214
220
213
220
213
102
xbb-9 fab heavy chain
xbb-9 fab light chain
homo sapiens
homo sapiens
E
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
58
21
0.72
HL
train
8r80_J
8r80
sars-cov-2 delta rbd in complex with xbb-9 fab and an anti-fab nanobody
yes
viral protein
2023-11-27
2024-05-08
x-ray diffraction
4.03
0.313
0.268
38723626
10.1016/j.xcrm.2024.101553
0
auth_asym_id
VHH
IGHV3
N.A.
J
N.A.
MAGSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSSHHHHHHEPEA
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS
N.A.
13.864453
0
135
0
120
0
120
0
0
anti-fab nanobody
N.A.
synthetic construct
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
8r80_N
8r80
sars-cov-2 delta rbd in complex with xbb-9 fab and an anti-fab nanobody
yes
viral protein
2023-11-27
2024-05-08
x-ray diffraction
4.03
0.313
0.268
38723626
10.1016/j.xcrm.2024.101553
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
MAGSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSSHHHHHHEPEA
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS
N.A.
13.947959
0
135
0
120
0
120
0
0
anti-fab nanobody
N.A.
synthetic construct
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
8r80_H_L
8r80
sars-cov-2 delta rbd in complex with xbb-9 fab and an anti-fab nanobody
yes
viral protein
2023-11-27
2024-05-08
x-ray diffraction
4.03
0.313
0.268
38723626
10.1016/j.xcrm.2024.101553
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
QVQLVETGGGLVQPGGSLRLSCEASEIIVSANYMTWVRQAPGKGLEWVSLIYPGGTTYLSDSLKGRFTVSRDNSKNTMNLEMNSLRAGDTAVYYCARLIVGGIAGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
AIQLTQSPSSLSASVGDRVTITCQATHDINKFLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGFGTTFTFTISSLQPEDIATYFCHQYENIPPIFGPGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLVETGGGLVQPGGSLRLSCEASEIIVSANYMTWVRQAPGKGLEWVSLIYPGGTTYLSDSLKGRFTVSRDNSKNTMNLEMNSLRAGDTAVYYCARLIVGGIAGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS
AIQLTQSPSSLSASVGDRVTITCQATHDINKFLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGFGTTFTFTISSLQPEDIATYFCHQYENIPPIFGPGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
21.2194
23.444578
224
214
220
214
220
214
103
xbb-9 fab heavy chain
xbb-9 fab light chain
homo sapiens
homo sapiens
R
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
56
21
0.72
HL
train
8x8l_E
8x8l
cryo-em structure of the cortistatin 17-bound somatostatin receptor 5-gi protein complex
no
signaling protein
2023-11-27
2024-06-12
electron microscopy
2.7
N.A.
N.A.
38885377
10.1073/pnas.2321710121
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKL
N.A.
17.2598
0
248
0
230
0
244
0
0
scfv16
N.A.
mus musculus
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
35;25
22;10
0.96;0.77
H_only
train
8r8d_E_I
8r8d
cryo-em structure of coagulation factor beta-xiia in complex with the garadacimab fab fragment (symmetric dimer)
no
blood clotting
2023-11-29
2023-12-13
electron microscopy
2.6
N.A.
N.A.
39059382
10.1016/j.str.2024.07.001
0
auth_asym_id
VH:VL
IGHV3
IGLV1
E
I
EVQLLESGGGLVQPGGSLRLSCAASGFTFSKYIMQWVRQAPGKGLEWVSGIDIPTKGTVYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARALPRSGYLISPHYYYYALDVWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPP
QSVLTQPPSASGTPGQRVTISCSGSSSNIGRNYVYWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDASLRGVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLLESGGGLVQPGGSLRLSCAASGFTFSKYIMQWVRQAPGKGLEWVSGIDIPTKGTVYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARALPRSGYLISPHYYYYALDVWGQGTTVTVSS
SVLTQPPSASGTPGQRVTISCSGSSSNIGRNYVYWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDASLRGVFGGGTKLTVL
15.05193
13.210599
234
215
128
108
128
108
57
garadacimab heavy chain variable region
garadacimab light chain variable region
homo sapiens
homo sapiens
A;B
protein;protein
coagulation factor xii;coagulation factor xii
homo sapiens;homo sapiens
24;50
10;17
0.91;0.89
HL
train
8r8d_H_L
8r8d
cryo-em structure of coagulation factor beta-xiia in complex with the garadacimab fab fragment (symmetric dimer)
no
blood clotting
2023-11-29
2023-12-13
electron microscopy
2.6
N.A.
N.A.
39059382
10.1016/j.str.2024.07.001
0
auth_asym_id
VH:VL
IGHV3
IGLV1
H
L
EVQLLESGGGLVQPGGSLRLSCAASGFTFSKYIMQWVRQAPGKGLEWVSGIDIPTKGTVYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARALPRSGYLISPHYYYYALDVWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPP
QSVLTQPPSASGTPGQRVTISCSGSSSNIGRNYVYWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDASLRGVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLLESGGGLVQPGGSLRLSCAASGFTFSKYIMQWVRQAPGKGLEWVSGIDIPTKGTVYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARALPRSGYLISPHYYYYALDVWGQGTTVTVSS
SVLTQPPSASGTPGQRVTISCSGSSSNIGRNYVYWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDASLRGVFGGGTKLTVL
15.051584
13.210386
234
215
128
108
128
108
57
garadacimab heavy chain variable region
garadacimab light chain variable region
homo sapiens
homo sapiens
A;B
protein;protein
coagulation factor xii;coagulation factor xii
homo sapiens;homo sapiens
50;23
17;10
0.89;0.91
HL
train
8r8k_H_L
8r8k
xbb-4 fab in complex with sars-cov-2 ba.2.12.1 spike glycoprotein
no
viral protein
2023-11-29
2024-05-08
electron microscopy
3.41
N.A.
N.A.
38723626
10.1016/j.xcrm.2024.101553
0
auth_asym_id
VH:VL
IGHV3
IGKV1
H
L
EVQLVQSGGGLVKPGGSLRLSCAASGFSFTNAWMNWVRQAPGKGLEWVGRIKSKADGGTTDYAAPVKGKFTISRDDSKNTLYLQMNSLKTEDTAIYYCTSDVYDFSTGFGQRDDFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
DIVMTQSPSSLSASVGDRVTITCRASQSISYFLNWYQQKPGKAPKLLISAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSSLITFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVQSGGGLVKPGGSLRLSCAASGFSFTNAWMNWVRQAPGKGLEWVGRIKSKADGGTTDYAAPVKGKFTISRDDSKNTLYLQMNSLKTEDTAIYYCTSDVYDFSTGFGQRDDFDYWGQGTLVTVSS
DIVMTQSPSSLSASVGDRVTITCRASQSISYFLNWYQQKPGKAPKLLISAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSSLITFGGGTKVEIK
14.440727
13.163763
233
214
128
107
128
107
40
xbb-4 fab heavy chain
xbb-4 fab light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein,fibritin
severe acute respiratory syndrome coronavirus 2
53
23
0.92
HL
train
8v4f_B_D
8v4f
model and map from local refinement of a cab-a17 - omicron ba.1 spike complex
no
viral protein/immune system
2023-11-29
2024-06-05
electron microscopy
2.68
N.A.
N.A.
38761799
10.1016/j.xcrm.2024.101577
0
auth_asym_id
VH:VL
IGHV3
IGKV3
B
D
DVHLVESGGGLIQPGGSLRLSCAASEFIVSANYMSWVRQAPGEGLQWVSVIYPGGSTFYAESVKGRFTISRDNSRNTLYLQMNSLRAEDTGVYYCARDYGDFYFDYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERASLSCRASQSLSTYLAWYQQKPGQAPRLLIFGASSRASGIPDRFSGGGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKVEI
DVHLVESGGGLIQPGGSLRLSCAASEFIVSANYMSWVRQAPGEGLQWVSVIYPGGSTFYAESVKGRFTISRDNSRNTLYLQMNSLRAEDTGVYYCARDYGDFYFDYWGQGTLVTVS
EIVLTQSPGTLSLSPGERASLSCRASQSLSTYLAWYQQKPGQAPRLLIFGASSRASGIPDRFSGGGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKVEI
13.362351
13.033702
117
106
116
106
116
106
42
cab-a17 variable heavy-chain
cab-a17 variable light chain
homo sapiens
homo sapiens
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
58
22
0.76
HL
train
8v4i_H_L
8v4i
structure of bovine anti-hiv fab else1
no
immune system
2023-11-29
2024-09-04
x-ray diffraction
1.81
0.257
0.221
39250525
10.1371/journal.ppat.1012042
0
auth_asym_id
VH+:FabL
IGHV4
IGLV1
H
L
KVQLRESGPSLIKPSQTLSLTCTTSIFSLIDKTVGWVRQAPGKSLEWLGSIDTSGNTGYNPGLKSRLHITKDNSRSQVSLSLSSVTTADSATYYCTTVHQQTRKGCPDGWRFGWDCGFHGYGQEDCYEDCIDILSSQTLSPTDAYEFHVDAWGQGLLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
QAVLNQPSSVSGSLGQRVSITCSGSSSNVGNGYVSWYQLIPGSAPRTLIYGDTSRASGVPDRFSGSRSGNTATLTISSLQAEDEADYFCASAEDSSSNAVFGSGTTLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
KVQLRESGPSLIKPSQTLSLTCTTSIFSLIDKTVGWVRQAPGKSLEWLGSIDTSGNTGYNPGLKSRLHITKDNSRSQVSLSLSSVTTADSATYYCTTVHQQTRKGCPDGWRFGWDCGFHGYGQEDCYEDCIDILSSQTLSPTDAYEFHVDAWGQGLLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
AVLNQPSSVSGSLGQRVSITCSGSSSNVGNGYVSWYQLIPGSAPRTLIYGDTSRASGVPDRFSGSRSGNTATLTISSLQAEDEADYFCASAEDSSSNAVFGSGTTLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC
26.646591
23.547655
265
216
265
214
265
214
115
else1 fab heavy chain
else1 fab light chain
bos taurus
bos taurus
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
8x9b_O_P
8x9b
cryo-em structure of coxsackievirus a16 empty particle in complex with fab h1a6.2 (local refinement)
no
viral protein
2023-11-29
2024-09-04
electron microscopy
3.82
N.A.
N.A.
39424982
10.1038/s41564-024-01822-7
0
auth_asym_id
VH:VL
IGHV1
IGKV2
O
P
EVQLVQSGAEVKKPGASVKVSCKASGFNIKDFYIHWVRQRPGQGLEWIGWIDPKVGNTMFDPKFQGKARITVDASISTAYLELSRLRSDDTAVYYCSRGAAAYWGQGTLVTVSS
AVVMTQTPLSLPVTLGQPASISCKSSQSLLYSDGKTYVNWFQQRPGQSPKRLIYLVSRLDSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCWQGTHLPYTFGQGTKLEIK
VQLVQSGAEVKKPGASVKVSCKASGFNIKDFYIHWVRQRPGQGLEWIGWIDPKVGNTMFDPKFQGKARITVDASISTAYLELSRLRSDDTAVYYCSRGAAAYWGQGTLVTVS
AVVMTQTPLSLPVTLGQPASISCKSSQSLLYSDGKTYVNWFQQRPGQSPKRLIYLVSRLDSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCWQGTHLPYTFGQGTKLEIK
13.544581
14.035364
114
112
112
112
112
112
32
the heavy chain of fab h1a6.2
the light chain of fab h1a6.2
mus musculus
mus musculus
E;I
protein;protein
capsid protein vp1;genome polyprotein
coxsackievirus a16;coxsackievirus a16
11;41
5;19
0.71;0.68
HL
train
8x9b_R_S
8x9b
cryo-em structure of coxsackievirus a16 empty particle in complex with fab h1a6.2 (local refinement)
no
viral protein
2023-11-29
2024-09-04
electron microscopy
3.82
N.A.
N.A.
39424982
10.1038/s41564-024-01822-7
0
auth_asym_id
VH:VL
IGHV1
IGKV2
R
S
EVQLVQSGAEVKKPGASVKVSCKASGFNIKDFYIHWVRQRPGQGLEWIGWIDPKVGNTMFDPKFQGKARITVDASISTAYLELSRLRSDDTAVYYCSRGAAAYWGQGTLVTVSS
AVVMTQTPLSLPVTLGQPASISCKSSQSLLYSDGKTYVNWFQQRPGQSPKRLIYLVSRLDSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCWQGTHLPYTFGQGTKLEIK
VQLVQSGAEVKKPGASVKVSCKASGFNIKDFYIHWVRQRPGQGLEWIGWIDPKVGNTMFDPKFQGKARITVDASISTAYLELSRLRSDDTAVYYCSRGAAAYWGQGTLVTVS
AVVMTQTPLSLPVTLGQPASISCKSSQSLLYSDGKTYVNWFQQRPGQSPKRLIYLVSRLDSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCWQGTHLPYTFGQGTKLEIK
13.544584
14.035352
114
112
112
112
112
112
32
the heavy chain of fab h1a6.2
the light chain of fab h1a6.2
mus musculus
mus musculus
H;L
protein;protein
capsid protein vp1;genome polyprotein
coxsackievirus a16;coxsackievirus a16
11;41
5;19
0.71;0.68
HL
train
8v52_F_E
8v52
crystal structure of 2a10 fab bound to human tgf-beta3
no
cytokine/immune system
2023-11-30
2024-04-10
x-ray diffraction
2.5
0.269
0.221
38272035
10.1016/j.medj.2023.12.011
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
F
E
EVQLLESGGGLVQPGGSLRLSCAASGFDFNSYGMSWVRQAPGKGLELVSDIVSKTYNYATYYSDSVKDRFTISRDDSKNTLYLQMNSLRAEDTAVYYCTVAPGGSFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
DIQLTQSPSSLSASVGDRVTITCRASQSVSISRFNLMHWYQQKPGKAPKLLIYRASNLASGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQHSRESPWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLLESGGGLVQPGGSLRLSCAASGFDFNSYGMSWVRQAPGKGLELVSDIVSKTYNYATYYSDSVKDRFTISRDDSKNTLYLQMNSLRAEDTAVYYCTVAPGGSFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV
DIQLTQSPSSLSASVGDRVTITCRASQSVSISRFNLMHWYQQKPGKAPKLLIYRASNLASGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQHSRESPWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTL
18.454988
20.892303
227
218
182
166
217
183
64
2a10 fab heavy chain
2a10 fab light chain
homo sapiens
homo sapiens
A
protein
transforming growth factor beta-3
homo sapiens
40
19
0.79
HL
train
8v52_D_C
8v52
crystal structure of 2a10 fab bound to human tgf-beta3
no
cytokine/immune system
2023-11-30
2024-04-10
x-ray diffraction
2.5
0.269
0.221
38272035
10.1016/j.medj.2023.12.011
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
D
C
EVQLLESGGGLVQPGGSLRLSCAASGFDFNSYGMSWVRQAPGKGLELVSDIVSKTYNYATYYSDSVKDRFTISRDDSKNTLYLQMNSLRAEDTAVYYCTVAPGGSFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
DIQLTQSPSSLSASVGDRVTITCRASQSVSISRFNLMHWYQQKPGKAPKLLIYRASNLASGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQHSRESPWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLLESGGGLVQPGGSLRLSCAASGFDFNSYGMSWVRQAPGKGLELVSDIVSKTYNYATYYSDSVKDRFTISRDDSKNTLYLQMNSLRAEDTAVYYCTVAPGGSFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQLTQSPSSLSASVGDRVTITCRASQSVSISRFNLMHWYQQKPGKAPKLLIYRASNLASGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQHSRESPWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
21.681252
23.659552
227
218
220
216
220
216
92
2a10 fab heavy chain
2a10 fab light chain
homo sapiens
homo sapiens
B
protein
transforming growth factor beta-3
homo sapiens
42
22
0.81
HL
train
8v5k_G
8v5k
structure of the human respirovirus 3 fusion protein bound to camelid nanobodies 4c03 and 4c06
no
viral protein/immune system
2023-11-30
2024-05-22
electron microscopy
2.6
N.A.
N.A.
38937429
10.1038/s41467-024-49757-1
0
auth_asym_id
VHH
IGHV3
N.A.
G
N.A.
EVQLVESGGGLVQPGGSLRLSCSASGSLSTIKALGWYRRAPGRERELVASITSAGETNYADSAKGRFTVSTDNAKNTVDLRMNSLKPEDTAVYYCYAESFVLNIYWGQGTQVTVSSG
N.A.
EVQLVESGGGLVQPGGSLRLSCSASGSLSTIKALGWYRRAPGRERELVASITSAGETNYADSAKGRFTVSTDNAKNTVDLRMNSLKPEDTAVYYCYAESFVLNIYWGQGTQVTVSSG
N.A.
13.737989
0
117
0
117
0
117
0
0
camelid nanobody 4c06
N.A.
lama glama
N.A.
A
protein
fusion glycoprotein f0
human respirovirus 3
55
17
0.65
H_only
train
8v5k_E
8v5k
structure of the human respirovirus 3 fusion protein bound to camelid nanobodies 4c03 and 4c06
no
viral protein/immune system
2023-11-30
2024-05-22
electron microscopy
2.6
N.A.
N.A.
38937429
10.1038/s41467-024-49757-1
0
auth_asym_id
VHH
IGHV3
N.A.
E
N.A.
EVQLVESGGGLVRAGGSLRLSCAASLRDLHTRTFYMGWFRQDPGKEREFVAAIDWNTGAASYPDSVKGRFTISKDNARNAVYLQMNNLKPEDTAVYYCAVGRPPLNRPTLAYYWGQGTQVTVSS
N.A.
EVQLVESGGGLVRAGGSLRLSCAASLRDLHTRTFYMGWFRQDPGKEREFVAAIDWNTGAASYPDSVKGRFTISKDNARNAVYLQMNNLKPEDTAVYYCAVGRPPLNRPTLAYYWGQGTQVTVSS
N.A.
13.90344
0
124
0
124
0
124
0
0
camelid nanobody 4c03
N.A.
lama glama
N.A.
A;B
protein;protein
fusion glycoprotein f0;fusion glycoprotein f0
human respirovirus 3;human respirovirus 3
18;24
7;11
0.64;0.92
H_only
train
8v5k_D
8v5k
structure of the human respirovirus 3 fusion protein bound to camelid nanobodies 4c03 and 4c06
no
viral protein/immune system
2023-11-30
2024-05-22
electron microscopy
2.6
N.A.
N.A.
38937429
10.1038/s41467-024-49757-1
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
EVQLVESGGGLVRAGGSLRLSCAASLRDLHTRTFYMGWFRQDPGKEREFVAAIDWNTGAASYPDSVKGRFTISKDNARNAVYLQMNNLKPEDTAVYYCAVGRPPLNRPTLAYYWGQGTQVTVSS
N.A.
EVQLVESGGGLVRAGGSLRLSCAASLRDLHTRTFYMGWFRQDPGKEREFVAAIDWNTGAASYPDSVKGRFTISKDNARNAVYLQMNNLKPEDTAVYYCAVGRPPLNRPTLAYYWGQGTQVTVSS
N.A.
13.897234
0
124
0
124
0
124
0
0
camelid nanobody 4c03
N.A.
lama glama
N.A.
A;C
protein;protein
fusion glycoprotein f0;fusion glycoprotein f0
human respirovirus 3;human respirovirus 3
24;20
11;8
0.92;0.62
H_only
train
8v5k_H
8v5k
structure of the human respirovirus 3 fusion protein bound to camelid nanobodies 4c03 and 4c06
no
viral protein/immune system
2023-11-30
2024-05-22
electron microscopy
2.6
N.A.
N.A.
38937429
10.1038/s41467-024-49757-1
0
auth_asym_id
VHH
IGHV3
N.A.
H
N.A.
EVQLVESGGGLVQPGGSLRLSCSASGSLSTIKALGWYRRAPGRERELVASITSAGETNYADSAKGRFTVSTDNAKNTVDLRMNSLKPEDTAVYYCYAESFVLNIYWGQGTQVTVSSG
N.A.
EVQLVESGGGLVQPGGSLRLSCSASGSLSTIKALGWYRRAPGRERELVASITSAGETNYADSAKGRFTVSTDNAKNTVDLRMNSLKPEDTAVYYCYAESFVLNIYWGQGTQVTVSSG
N.A.
13.733147
0
117
0
117
0
117
0
0
camelid nanobody 4c06
N.A.
lama glama
N.A.
B
protein
fusion glycoprotein f0
human respirovirus 3
54
17
0.65
H_only
train
8v5k_F
8v5k
structure of the human respirovirus 3 fusion protein bound to camelid nanobodies 4c03 and 4c06
no
viral protein/immune system
2023-11-30
2024-05-22
electron microscopy
2.6
N.A.
N.A.
38937429
10.1038/s41467-024-49757-1
0
auth_asym_id
VHH
IGHV3
N.A.
F
N.A.
EVQLVESGGGLVRAGGSLRLSCAASLRDLHTRTFYMGWFRQDPGKEREFVAAIDWNTGAASYPDSVKGRFTISKDNARNAVYLQMNNLKPEDTAVYYCAVGRPPLNRPTLAYYWGQGTQVTVSS
N.A.
EVQLVESGGGLVRAGGSLRLSCAASLRDLHTRTFYMGWFRQDPGKEREFVAAIDWNTGAASYPDSVKGRFTISKDNARNAVYLQMNNLKPEDTAVYYCAVGRPPLNRPTLAYYWGQGTQVTVSS
N.A.
13.890445
0
124
0
124
0
124
0
0
camelid nanobody 4c03
N.A.
lama glama
N.A.
B;C
protein;protein
fusion glycoprotein f0;fusion glycoprotein f0
human respirovirus 3;human respirovirus 3
19;24
8;11
0.67;0.92
H_only
train
8v5k_I
8v5k
structure of the human respirovirus 3 fusion protein bound to camelid nanobodies 4c03 and 4c06
no
viral protein/immune system
2023-11-30
2024-05-22
electron microscopy
2.6
N.A.
N.A.
38937429
10.1038/s41467-024-49757-1
0
auth_asym_id
VHH
IGHV3
N.A.
I
N.A.
EVQLVESGGGLVQPGGSLRLSCSASGSLSTIKALGWYRRAPGRERELVASITSAGETNYADSAKGRFTVSTDNAKNTVDLRMNSLKPEDTAVYYCYAESFVLNIYWGQGTQVTVSSG
N.A.
EVQLVESGGGLVQPGGSLRLSCSASGSLSTIKALGWYRRAPGRERELVASITSAGETNYADSAKGRFTVSTDNAKNTVDLRMNSLKPEDTAVYYCYAESFVLNIYWGQGTQVTVSSG
N.A.
13.736567
0
117
0
117
0
117
0
0
camelid nanobody 4c06
N.A.
lama glama
N.A.
C
protein
fusion glycoprotein f0
human respirovirus 3
54
17
0.65
H_only
train
8r9w_H_L
8r9w
pdcov spike glycoprotein ectodomain in complex with the 22c10 antibody fab fragment
no
viral protein
2023-11-30
2024-06-05
electron microscopy
3.1
N.A.
N.A.
38909062
10.1038/s41467-024-49693-0
0
auth_asym_id
VH:VL
IGHV3
IGKV3
H
L
EVRLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSIITDSGGGTYFADSVKGRFTISRDNSKNTLYLQMNSLRAEDTALYYCVKVGFCYSSTCPFDYWGQGTLVTVS
ELVMTQSPATLSVSPGERATLSCRASQSVSSDLAWYQQRPGRAPRLLIYDASTRTTGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCHQYNNWLTFGQGTRLEI
EVRLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSIITDSGGGTYFADSVKGRFTISRDNSKNTLYLQMNSLRAEDTALYYCVKVGFCYSSTCPFDYWGQGTLVTVS
ELVMTQSPATLSVSPGERATLSCRASQSVSSDLAWYQQRPGRAPRLLIYDASTRTTGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCHQYNNWLTFGQGTRLEI
13.729436
13.006275
121
105
121
105
121
105
40
22c10 antibody heavy chain
22c10 antibody light chain
homo sapiens
homo sapiens
A
protein
spike protein
deltacoronavirus
46
24
0.86
HL
train
8r9w_D_F
8r9w
pdcov spike glycoprotein ectodomain in complex with the 22c10 antibody fab fragment
no
viral protein
2023-11-30
2024-06-05
electron microscopy
3.1
N.A.
N.A.
38909062
10.1038/s41467-024-49693-0
0
auth_asym_id
VH:VL
IGHV3
IGKV3
D
F
EVRLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSIITDSGGGTYFADSVKGRFTISRDNSKNTLYLQMNSLRAEDTALYYCVKVGFCYSSTCPFDYWGQGTLVTVS
ELVMTQSPATLSVSPGERATLSCRASQSVSSDLAWYQQRPGRAPRLLIYDASTRTTGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCHQYNNWLTFGQGTRLEI
EVRLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSIITDSGGGTYFADSVKGRFTISRDNSKNTLYLQMNSLRAEDTALYYCVKVGFCYSSTCPFDYWGQGTLVTVS
ELVMTQSPATLSVSPGERATLSCRASQSVSSDLAWYQQRPGRAPRLLIYDASTRTTGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCHQYNNWLTFGQGTRLEI
13.729415
13.006705
121
105
121
105
121
105
40
22c10 antibody heavy chain
22c10 antibody light chain
homo sapiens
homo sapiens
B
protein
spike protein
deltacoronavirus
46
24
0.86
HL
train
8r9w_E_G
8r9w
pdcov spike glycoprotein ectodomain in complex with the 22c10 antibody fab fragment
no
viral protein
2023-11-30
2024-06-05
electron microscopy
3.1
N.A.
N.A.
38909062
10.1038/s41467-024-49693-0
0
auth_asym_id
VH:VL
IGHV3
IGKV3
E
G
EVRLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSIITDSGGGTYFADSVKGRFTISRDNSKNTLYLQMNSLRAEDTALYYCVKVGFCYSSTCPFDYWGQGTLVTVS
ELVMTQSPATLSVSPGERATLSCRASQSVSSDLAWYQQRPGRAPRLLIYDASTRTTGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCHQYNNWLTFGQGTRLEI
EVRLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSIITDSGGGTYFADSVKGRFTISRDNSKNTLYLQMNSLRAEDTALYYCVKVGFCYSSTCPFDYWGQGTLVTVS
ELVMTQSPATLSVSPGERATLSCRASQSVSSDLAWYQQRPGRAPRLLIYDASTRTTGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCHQYNNWLTFGQGTRLEI
13.729424
13.006247
121
105
121
105
121
105
40
22c10 antibody heavy chain
22c10 antibody light chain
homo sapiens
homo sapiens
C
protein
spike protein
deltacoronavirus
46
24
0.86
HL
train
8r9y_B_C
8r9y
s1b domain of the pdcov spike glycoprotein in complex with the 67b12 and 42h3 antibody fab fragments
no
viral protein
2023-11-30
2024-06-05
electron microscopy
3
N.A.
N.A.
38909062
10.1038/s41467-024-49693-0
0
auth_asym_id
FabH:FabL
IGHV1
IGKV3
B
C
VQLVQSGAEVKKPGSSVKVSCKASGGTFSSLAISWVRQAPGQGLEWMGGIIPTFGTTNYAQNFRGRVTITADKSTSTAYMELSTLISEDTAVYFCARERSTDTWPGDAFDIWGQGTMVTVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLLGQTYICNVNHKPSNTKVDKKVEPK
EILMTQSPATLSVSPGERATLSCWASQSVNSKLAWYQQKPGQAPRLLIYDTSTRATGIPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNYWPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSF
VQLVQSGAEVKKPGSSVKVSCKASGGTFSSLAISWVRQAPGQGLEWMGGIIPTFGTTNYAQNFRGRVTITADKSTSTAYMELSTLISEDTAVYFCARERSTDTWPGDAFDIWGQGTMVTVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLLGQTYICNVNHKPSNTKVDKKVEPK
EILMTQSPATLSVSPGERATLSCWASQSVNSKLAWYQQKPGQAPRLLIYDTSTRATGIPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNYWPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSF
22.210693
22.677963
218
209
218
209
218
209
96
67b12 antibody heavy chain
67b12 antibody light chain
homo sapiens
homo sapiens
A
protein
spike protein
porcine deltacoronavirus
37
15
0.71
HL
train
8r9y_H_L
8r9y
s1b domain of the pdcov spike glycoprotein in complex with the 67b12 and 42h3 antibody fab fragments
no
viral protein
2023-11-30
2024-06-05
electron microscopy
3
N.A.
N.A.
38909062
10.1038/s41467-024-49693-0
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYDMHWVRQAPGKGLEWVAVIWRDGSNEYYADSVKGRFIISRDNSKNTLYLQMNSLRAEDTAVYYCARRGIIMVRGLLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQMTQSPPSLSASVGDRVTITCRASQGISNYLAWHQQKPGKVPKLLIYTASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAPFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYDMHWVRQAPGKGLEWVAVIWRDGSNEYYADSVKGRFIISRDNSKNTLYLQMNSLRAEDTAVYYCARRGIIMVRGLLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQMTQSPPSLSASVGDRVTITCRASQGISNYLAWHQQKPGKVPKLLIYTASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAPFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
22.052534
22.780401
219
212
219
212
219
212
94
42h3 antibody heavy chain
42h3 antibody light chain
homo sapiens
homo sapiens
A
protein
spike protein
porcine deltacoronavirus
30
12
0.8
HL
train
8r9z_B_C
8r9z
s1b domain of the pdcov spike glycoprotein in complex with the 67b12 and 46e6 antibody fab fragments
no
viral protein
2023-11-30
2024-06-05
electron microscopy
2.9
N.A.
N.A.
38909062
10.1038/s41467-024-49693-0
0
auth_asym_id
FabH:FabL
IGHV1
IGKV3
B
C
VQLVQSGAEVKKPGSSVKVSCKASGGTFSSLAISWVRQAPGQGLEWMGGIIPTFGTTNYAQNFRGRVTITADKSTSTAYMELSTLISEDTAVYFCARERSTDTWPGDAFDIWGQGTMVTVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLLGQTYICNVNHKPSNTKVDKKVEPK
EILMTQSPATLSVSPGERATLSCWASQSVNSKLAWYQQKPGQAPRLLIYDTSTRATGIPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNYWPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSF
VQLVQSGAEVKKPGSSVKVSCKASGGTFSSLAISWVRQAPGQGLEWMGGIIPTFGTTNYAQNFRGRVTITADKSTSTAYMELSTLISEDTAVYFCARERSTDTWPGDAFDIWGQGTMVTVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLLGQTYICNVNHKPSNTKVDKKVEPK
EILMTQSPATLSVSPGERATLSCWASQSVNSKLAWYQQKPGQAPRLLIYDTSTRATGIPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNYWPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSF
22.190645
22.667763
218
209
218
209
218
209
88
67b12 antibody heavy chain
67b12 antibody light chain
homo sapiens
homo sapiens
A
protein
spike protein
porcine deltacoronavirus
37
13
0.68
HL
train
8r9z_H_L
8r9z
s1b domain of the pdcov spike glycoprotein in complex with the 67b12 and 46e6 antibody fab fragments
no
viral protein
2023-11-30
2024-06-05
electron microscopy
2.9
N.A.
N.A.
38909062
10.1038/s41467-024-49693-0
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVIWRDGSNEFYADSVKGRFTISRDNSKDTLYLQMNSLRAEDTAVYYCARRGIIMVRGLLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQMTQSPPSLSASVGDRVTITCRASQGISNYLAWHQQKPGKVPKLLIYTASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAPFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVIWRDGSNEFYADSVKGRFTISRDNSKDTLYLQMNSLRAEDTAVYYCARRGIIMVRGLLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQMTQSPPSLSASVGDRVTITCRASQGISNYLAWHQQKPGKVPKLLIYTASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAPFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
22.03136
22.750164
219
212
219
212
219
212
95
46e6 antibody heavy chain
46e6 antibody heavy chain
homo sapiens
homo sapiens
A
protein
spike protein
porcine deltacoronavirus
30
13
0.87
HL
train
8v5l_B_C
8v5l
structure of the varicella zoster virus (vzv) gi binding domain of glycoprotein e (ge) in complex with human fab 1a2 and 1e12
no
viral protein
2023-11-30
2024-10-09
x-ray diffraction
3.09
0.269
0.233
39460278
10.3390/vaccines12101111
0
auth_asym_id
FabH:FabL
IGHV4
IGLV1
B
C
QVQLQESGPGLVRPSQTLSLTCTVSGGSITSGSFYWSWVRQSAGKGLEWIGRIFKTGSTTYKPSLKSRVTMSVDTSKNQFSLKLSSVTATDTAVYFCARAPFYNDFSGYSYYFDYWGQGTLVTVSSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGSENLYFQGSHHHHHH
QSVLTQPPSASGTPGQRVTISCSGSSSDIGPNTVHWYRQVPGTAPTLLIYSDNQRPSGVPARFSGSRSGTSASLAISGLQSEDEAIYYCAAWDDSLNPLYVFGTGTKVTVLGRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLQESGPGLVRPSQTLSLTCTVSGGSITSGSFYWSWVRQSAGKGLEWIGRIFKTGSTTYKPSLKSRVTMSVDTSKNQFSLKLSSVTATDTAVYFCARAPFYNDFSGYSYYFDYWGQGTLVTVSSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
QSVLTQPPSASGTPGQRVTISCSGSSSDIGPNTVHWYRQVPGTAPTLLIYSDNQRPSGVPARFSGSRSGTSASLAISGLQSEDEAIYYCAAWDDSLNPLYVFGTGTKVTVLGRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
21.905712
23.63932
248
219
231
217
231
217
108
fab 1e12 heavy chain
fab 1e12 light chain
homo sapiens
homo sapiens
A
protein
envelope glycoprotein e
human alphaherpesvirus 3
42
19
0.9
HL
train
8v5l_H_L
8v5l
structure of the varicella zoster virus (vzv) gi binding domain of glycoprotein e (ge) in complex with human fab 1a2 and 1e12
no
viral protein
2023-11-30
2024-10-09
x-ray diffraction
3.09
0.269
0.233
39460278
10.3390/vaccines12101111
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
H
L
EVQLVQSGAEMKKPGASVKVSCKTSGYVFNEYYIHWVRQAPGQGLEWLGRINPNSGDANYAPKFQGRVTLTRDTSIRTYFMELNRLRSDDTAVYYCARIMYFEYDSWSDYWGQGTLVTVSSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGSENLYFQGSHHHHHH
DIQMTQSPSSLSASVGDRVTITCRASQSIRSNLNWYQQKPGKAPNVLIYATSSLQSGVPSRFSGSGSGTDFTLTIRSLQPEDFATYYCQQSYSLPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVQSGAEMKKPGASVKVSCKTSGYVFNEYYIHWVRQAPGQGLEWLGRINPNSGDANYAPKFQGRVTLTRDTSIRTYFMELNRLRSDDTAVYYCARIMYFEYDSWSDYWGQGTLVTVSSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS
DIQMTQSPSSLSASVGDRVTITCRASQSIRSNLNWYQQKPGKAPNVLIYATSSLQSGVPSRFSGSGSGTDFTLTIRSLQPEDFATYYCQQSYSLPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
21.306469
23.329716
243
214
224
212
224
212
104
fab 1a2 heavy chain
fab 1a2 light chain
homo sapiens
homo sapiens
A
protein
envelope glycoprotein e
human alphaherpesvirus 3
29
14
1
HL
train
8v5s_H_L
8v5s
vzv glycoprotein e c-terminal domain (cleaved) in complex with human fab 5a2
no
viral protein
2023-11-30
2024-10-09
x-ray diffraction
3.53
0.307
0.261
39460278
10.3390/vaccines12101111
0
auth_asym_id
FabH:FabL
IGHV4
IGKV1
H
L
QVQLQESGPGLVKPSETLSLTCIVSGGSISRYYWSWIRQPPGRGLEWIGNIYYTGTTNYNPSLQSRVTISLDTSKNQFSLRLTSVTAADTAVYYCARIGGVSFGERPIDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGSENLYFQGSHHHHHH
DIQMTQSPSSLSASVGDRVTITCRASQTISTYLNWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTITSLQPEDFAAYYCQQSYSIPLTFGGGTKVEIKGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
QVQLQESGPGLVKPSETLSLTCIVSGGSISRYYWSWIRQPPGRGLEWIGNIYYTGTTNYNPSLQSRVTISLDTSKNQFSLRLTSVTAADTAVYYCARIGGVSFGERPIDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
DIQMTQSPSSLSASVGDRVTITCRASQTISTYLNWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTITSLQPEDFAAYYCQQSYSIPLTFGGGTKVEIKGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
20.617817
23.715303
242
210
214
210
221
210
100
5a2 fab heavy chain
5a2 fab light chain
homo sapiens
homo sapiens
C
protein
envelope glycoprotein e
human alphaherpesvirus 3
42
22
0.85
HL
train
8v5s_A_B
8v5s
vzv glycoprotein e c-terminal domain (cleaved) in complex with human fab 5a2
no
viral protein
2023-11-30
2024-10-09
x-ray diffraction
3.53
0.307
0.261
39460278
10.3390/vaccines12101111
0
auth_asym_id
FabH:FabL
IGHV4
IGKV1
A
B
QVQLQESGPGLVKPSETLSLTCIVSGGSISRYYWSWIRQPPGRGLEWIGNIYYTGTTNYNPSLQSRVTISLDTSKNQFSLRLTSVTAADTAVYYCARIGGVSFGERPIDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGSENLYFQGSHHHHHH
DIQMTQSPSSLSASVGDRVTITCRASQTISTYLNWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTITSLQPEDFAAYYCQQSYSIPLTFGGGTKVEIKGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
QVQLQESGPGLVKPSETLSLTCIVSGGSISRYYWSWIRQPPGRGLEWIGNIYYTGTTNYNPSLQSRVTISLDTSKNQFSLRLTSVTAADTAVYYCARIGGVSFGERPIDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
DIQMTQSPSSLSASVGDRVTITCRASQTISTYLNWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTITSLQPEDFAAYYCQQSYSIPLTFGGGTKVEIKGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
20.647871
23.604311
242
210
214
210
221
210
98
5a2 fab heavy chain
5a2 fab light chain
homo sapiens
homo sapiens
D
protein
envelope glycoprotein e
human alphaherpesvirus 3
43
20
0.83
HL
train
8v5v_b_d
8v5v
structure of a sars-cov-2 spike s2 subunit in a pre-fusion, open conformation
yes
viral protein
2023-12-01
2024-12-18
electron microscopy
2.93
N.A.
N.A.
40705599
10.1016/j.celrep.2025.116052
0
auth_asym_id
VH:VL
IGHV1
IGKV3
b
d
QVQLVQSGAEVRKPGASVKVSCKASGYTFTGYYIHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGWVIMTRDTSISTAYMELSRLTSDDTAVYYCARCGARSYYYDSGDYCAFDIWGQGTVVTV
AIRMTQSPSTLSVSPGERATLSCRASQSVSSYLAWYQHKPGQAPRLLVYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPPFTFGPGTKVDI
QVQLVQSGAEVRKPGASVKVSCKASGYTFTGYYIHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGWVIMTRDTSISTAYMELSRLTSDDTAVYYCARCGARSYYYDSGDYCAFDIWGQGTVVTV
IRMTQSPSTLSVSPGERATLSCRASQSVSSYLAWYQHKPGQAPRLLVYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPPFTFGPGTKVD
14.747808
13.409885
125
108
125
106
125
106
43
variable domain of the heavy chain from the human antibody 6c10
variable domain of the light chain from the human antibody 6c10
homo sapiens
homo sapiens
E
protein
spike protein s2,fibritin
severe acute respiratory syndrome coronavirus 2
69
24
0.8
HL
train
8v5v_c_e
8v5v
structure of a sars-cov-2 spike s2 subunit in a pre-fusion, open conformation
yes
viral protein
2023-12-01
2024-12-18
electron microscopy
2.93
N.A.
N.A.
40705599
10.1016/j.celrep.2025.116052
0
auth_asym_id
VH:VL
IGHV1
IGKV3
c
e
QVQLVQSGAEVRKPGASVKVSCKASGYTFTGYYIHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGWVIMTRDTSISTAYMELSRLTSDDTAVYYCARCGARSYYYDSGDYCAFDIWGQGTVVTV
AIRMTQSPSTLSVSPGERATLSCRASQSVSSYLAWYQHKPGQAPRLLVYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPPFTFGPGTKVDI
QVQLVQSGAEVRKPGASVKVSCKASGYTFTGYYIHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGWVIMTRDTSISTAYMELSRLTSDDTAVYYCARCGARSYYYDSGDYCAFDIWGQGTVVTV
IRMTQSPSTLSVSPGERATLSCRASQSVSSYLAWYQHKPGQAPRLLVYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPPFTFGPGTKVD
14.752577
13.41066
125
108
125
106
125
106
43
variable domain of the heavy chain from the human antibody 6c10
variable domain of the light chain from the human antibody 6c10
homo sapiens
homo sapiens
F
protein
spike protein s2,fibritin
severe acute respiratory syndrome coronavirus 2
68
24
0.8
HL
train
8v5v_f_g
8v5v
structure of a sars-cov-2 spike s2 subunit in a pre-fusion, open conformation
yes
viral protein
2023-12-01
2024-12-18
electron microscopy
2.93
N.A.
N.A.
40705599
10.1016/j.celrep.2025.116052
0
auth_asym_id
VH:VL
IGHV1
IGKV3
f
g
QVQLVQSGAEVRKPGASVKVSCKASGYTFTGYYIHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGWVIMTRDTSISTAYMELSRLTSDDTAVYYCARCGARSYYYDSGDYCAFDIWGQGTVVTV
AIRMTQSPSTLSVSPGERATLSCRASQSVSSYLAWYQHKPGQAPRLLVYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPPFTFGPGTKVDI
QVQLVQSGAEVRKPGASVKVSCKASGYTFTGYYIHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGWVIMTRDTSISTAYMELSRLTSDDTAVYYCARCGARSYYYDSGDYCAFDIWGQGTVVTV
IRMTQSPSTLSVSPGERATLSCRASQSVSSYLAWYQHKPGQAPRLLVYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPPFTFGPGTKVD
14.744934
13.409591
125
108
125
106
125
106
43
variable domain of the heavy chain from the human antibody 6c10
variable domain of the light chain from the human antibody 6c10
homo sapiens
homo sapiens
G
protein
spike protein s2,fibritin
severe acute respiratory syndrome coronavirus 2
68
24
0.8
HL
train
8x9u_S
8x9u
identification, structure and agonist design of an androgen membrane receptor
no
membrane protein
2023-12-01
2025-02-12
electron microscopy
2.88
N.A.
N.A.
39884271
10.1016/j.cell.2025.01.006
0
auth_asym_id
scFv
N.A.
N.A.
S
N.A.
MVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELLEENLYFQGASHHHHHHHH
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.246017
0
267
0
230
0
247
0
0
scfv16
N.A.
synthetic construct
N.A.
A;B
protein;protein
gs protein alpha subunit;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
bos taurus;rattus norvegicus
32;23
16;9
0.76;0.82
H_only
train
8xa4_C_D
8xa4
a35 of mpxv in complex with mab981
no
viral protein
2023-12-01
2025-06-04
electron microscopy
3.08
N.A.
N.A.
N.A.
10.1016/j.cell.2025.08.005
0
auth_asym_id
VH:VL
IGHV4
IGKV3
C
D
QLQLQESGPGLVKPSETLSLTCTVSGGSISSNNDYWGWIRQPPGKGLEWIGSIYYSGRTNGNPSLKSRVNISADTSKNQFSLKLNSVTAADTAVYYCARLRLGSLLHRYRAVDPWGQGILVAVSS
EIVLTQSPGTLSLSPGERVTLSCRASQRVSSTYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQHFDSSLLTFGGGTKVEIK
QLQLQESGPGLVKPSETLSLTCTVSGGSISSNNDYWGWIRQPPGKGLEWIGSIYYSGRTNGNPSLKSRVNISADTSKNQFSLKLNSVTAADTAVYYCARLRLGSLLHRYRAVDPWGQGILVAVS
EIVLTQSPGTLSLSPGERVTLSCRASQRVSSTYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQHFDSSLLTFGGGTKVEI
14.366989
13.248421
125
108
124
107
124
107
50
heavy chain of mab981
light chain of mab981
homo sapiens
homo sapiens
A;B
protein;protein
protein opg161;protein opg161
monkeypox virus;monkeypox virus
33;41
12;20
0.75;0.91
HL
train
8v6u_E
8v6u
5ht2ar-minigq heterotrimer in complex with a novel agonist obtained from large scale docking
no
membrane protein
2023-12-03
2024-05-29
electron microscopy
3
N.A.
N.A.
38753765
10.1126/science.adn6354
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFADVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.669931
0
286
0
230
0
246
0
0
single-chain variable fragment 16 (scfv16)
N.A.
homo sapiens
N.A.
B;C
protein;protein
g protein alpha-subunit q (gi2-mini-gq chimera);guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
31;21
18;8
0.9;0.8
H_only
train
8v7o_H_L
8v7o
fab fragment of human mab #58 in complex with computationally optimized broadly reactive h1 influenza hemagglutinin x6
no
viral protein/immune system
2023-12-04
2024-04-10
electron microscopy
3.57
N.A.
N.A.
38810648
10.1016/j.str.2024.05.001
0
auth_asym_id
VH:VL
IGHV4
IGKV3
H
L
QVQLQESGPGLVKPSETLSLTCNVSGGSINSYYWSWIRQPPGKGLEWIGYVYHSGSTHYNPSLNSRVTISVDTSKRQFSLKLRSVTAADTAVYYCAREKSDFWTVDSFFYYMDVWGRGTTVTVSS
EIVLTQSPATLSLSPGERATLSCRASQSVATSLAWYQQKPGQPPRLLIYDASHRATAIPARFTGSGSGTDFTLTISSLEPEDFAVYYCQQRTHWPPALTFGGGTKVEIK
QVQLQESGPGLVKPSETLSLTCNVSGGSINSYYWSWIRQPPGKGLEWIGYVYHSGSTHYNPSLNSRVTISVDTSKRQFSLKLRSVTAADTAVYYCAREKSDFWTVDSFFYYMDVWGRGTTVTV
EIVLTQSPATLSLSPGERATLSCRASQSVATSLAWYQQKPGQPPRLLIYDASHRATAIPARFTGSGSGTDFTLTISSLEPEDFAVYYCQQRTHWPPALTFGGGTKVEIK
14.843941
13.870372
125
109
123
109
123
109
43
#58 heavy chain
#58 light chain
homo sapiens
homo sapiens
A
protein
hemagglutinin
influenza a virus
35
15
1
HL
train
8v7o_I_M
8v7o
fab fragment of human mab #58 in complex with computationally optimized broadly reactive h1 influenza hemagglutinin x6
no
viral protein/immune system
2023-12-04
2024-04-10
electron microscopy
3.57
N.A.
N.A.
38810648
10.1016/j.str.2024.05.001
0
auth_asym_id
VH:VL
IGHV4
IGKV3
I
M
QVQLQESGPGLVKPSETLSLTCNVSGGSINSYYWSWIRQPPGKGLEWIGYVYHSGSTHYNPSLNSRVTISVDTSKRQFSLKLRSVTAADTAVYYCAREKSDFWTVDSFFYYMDVWGRGTTVTVSS
EIVLTQSPATLSLSPGERATLSCRASQSVATSLAWYQQKPGQPPRLLIYDASHRATAIPARFTGSGSGTDFTLTISSLEPEDFAVYYCQQRTHWPPALTFGGGTKVEIK
QVQLQESGPGLVKPSETLSLTCNVSGGSINSYYWSWIRQPPGKGLEWIGYVYHSGSTHYNPSLNSRVTISVDTSKRQFSLKLRSVTAADTAVYYCAREKSDFWTVDSFFYYMDVWGRGTTVTV
EIVLTQSPATLSLSPGERATLSCRASQSVATSLAWYQQKPGQPPRLLIYDASHRATAIPARFTGSGSGTDFTLTISSLEPEDFAVYYCQQRTHWPPALTFGGGTKVEIK
14.843967
13.870359
125
109
123
109
123
109
45
#58 heavy chain
#58 light chain
homo sapiens
homo sapiens
B
protein
hemagglutinin
influenza a virus
37
15
1
HL
train
8v7o_J_N
8v7o
fab fragment of human mab #58 in complex with computationally optimized broadly reactive h1 influenza hemagglutinin x6
no
viral protein/immune system
2023-12-04
2024-04-10
electron microscopy
3.57
N.A.
N.A.
38810648
10.1016/j.str.2024.05.001
0
auth_asym_id
VH:VL
IGHV4
IGKV3
J
N
QVQLQESGPGLVKPSETLSLTCNVSGGSINSYYWSWIRQPPGKGLEWIGYVYHSGSTHYNPSLNSRVTISVDTSKRQFSLKLRSVTAADTAVYYCAREKSDFWTVDSFFYYMDVWGRGTTVTVSS
EIVLTQSPATLSLSPGERATLSCRASQSVATSLAWYQQKPGQPPRLLIYDASHRATAIPARFTGSGSGTDFTLTISSLEPEDFAVYYCQQRTHWPPALTFGGGTKVEIK
QVQLQESGPGLVKPSETLSLTCNVSGGSINSYYWSWIRQPPGKGLEWIGYVYHSGSTHYNPSLNSRVTISVDTSKRQFSLKLRSVTAADTAVYYCAREKSDFWTVDSFFYYMDVWGRGTTVTV
EIVLTQSPATLSLSPGERATLSCRASQSVATSLAWYQQKPGQPPRLLIYDASHRATAIPARFTGSGSGTDFTLTISSLEPEDFAVYYCQQRTHWPPALTFGGGTKVEIK
14.843929
13.870362
125
109
123
109
123
109
43
#58 heavy chain
#58 light chain
homo sapiens
homo sapiens
C
protein
hemagglutinin
influenza a virus
37
15
1
HL
train
8v8k_A
8v8k
crystal structure of nanobody nbe
no
immune system
2023-12-05
2024-09-11
x-ray diffraction
2.85
0.331
0.286
39384768
10.1038/s41467-024-52947-6
0
auth_asym_id
VHH
IGHV3
N.A.
A
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGSISSISTMGWYRQAPGKERELVAAITSGGSTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNFKYYSGSYFYKSEYDYWGKGTPVTVSS
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGSISSISTMGWYRQAPGKERELVAAITSGGSTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNFKYYSGSYFYKSEYDYWGKGTPVTVSS
N.A.
15.025884
0
123
0
123
0
123
0
0
nanobody nbe
N.A.
lama glama
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
8v8k_B
8v8k
crystal structure of nanobody nbe
no
immune system
2023-12-05
2024-09-11
x-ray diffraction
2.85
0.331
0.286
39384768
10.1038/s41467-024-52947-6
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGSISSISTMGWYRQAPGKERELVAAITSGGSTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNFKYYSGSYFYKSEYDYWGKGTPVTVSS
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGSISSISTMGWYRQAPGKERELVAAITSGGSTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNFKYYSGSYFYKSEYDYWGKGTPVTVSS
N.A.
14.900834
0
123
0
118
0
123
0
0
nanobody nbe
N.A.
lama glama
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
8v8k_C
8v8k
crystal structure of nanobody nbe
no
immune system
2023-12-05
2024-09-11
x-ray diffraction
2.85
0.331
0.286
39384768
10.1038/s41467-024-52947-6
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGSISSISTMGWYRQAPGKERELVAAITSGGSTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNFKYYSGSYFYKSEYDYWGKGTPVTVSS
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGSISSISTMGWYRQAPGKERELVAAITSGGSTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNFKYYSGSYFYKSEYDYWGKGTPVT
N.A.
14.93091
0
123
0
115
0
120
0
0
nanobody nbe
N.A.
lama glama
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
8rby_B
8rby
the crystal structure of the sars-cov-2 receptor binding domain in complex with the neutralizing nanobody 1.26
no
antiviral protein
2023-12-05
2024-12-11
x-ray diffraction
1.9
0.234
0.187
N.A.
N.A.
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
QVQLVESGGGLVQAGGSLRLSCAATGYTWSSVCMGWFRQAPGKEREGVAGIPSGRNRPYYADSVKGRFTISQDNAKNAVFLLMNSLKPEDTAIYYCAPCSAPHDPEYNYWGQGTQVTVSSALV
N.A.
QLVESGGGLVQAGGSLRLSCAATGYTWSSVCMGWFRQAPGKEREGVAGIPSGRNRPYYADSVKGRFTISQDNAKNAVFLLMNSLKPEDTAIYYCAPCSAPHDPEYNYWGQGTQVTVSSALV
N.A.
13.854698
0
123
0
121
0
121
0
0
camel-derived nanobody 1.26
N.A.
camelus dromedarius
N.A.
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
58
19
0.76
H_only
train
8v8f_B
8v8f
the co-crystal structure of anti-hiv scfv and utag
no
peptide binding protein
2023-12-05
2024-12-11
x-ray diffraction
2.27
0.275
0.225
N.A.
N.A.
0
auth_asym_id
scFv
N.A.
N.A.
B
N.A.
MAEVKLVESGGGLVKPGGSLKLSCAASGFTFSRFGMHWVRQTPEKRLEWVAYISSGSSTIYYADTVKGRFTISRDNAKNTLYLQMSSLRSEDTAIYYCARSGGIERYDGTYYVMDYWGQGTTLTVSSGGGGSGGGGSGGGGSDIVLTQSPASLTVSLGQRATISCRASESVDYYGKSFMNWYQQKPGQPPKLLIYAASNQGSGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSKEVPWTFGAGTKLEIKRAAAKGEFGGGGSGGGGSENLYFQ
N.A.
EVKLVESGGGLVKPGGSLKLSCAASGFTFSRFGMHWVRQTPEKRLEWVAYISSGSSTIYYADTVKGRFTISRDNAKNTLYLQMSSLRSEDTAIYYCARSGGIERYDGTYYVMDYWGQGTTLTVSSGGGGSGGGGSGGGGSDIVLTQSPASLTVSLGQRATISCRASESVDYYGKSFMNWYQQKPGQPPKLLIYAASNQGSGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSKEVPWTFGAGTKLEIKR
N.A.
17.694624
0
277
0
239
0
252
0
0
anti-hiv scfv
N.A.
mus musculus
N.A.
E
peptide
utag
human immunodeficiency virus 1
32
19
0.86
H_only
train
8v8f_C
8v8f
the co-crystal structure of anti-hiv scfv and utag
no
peptide binding protein
2023-12-05
2024-12-11
x-ray diffraction
2.27
0.275
0.225
N.A.
N.A.
0
auth_asym_id
scFv
N.A.
N.A.
C
N.A.
MAEVKLVESGGGLVKPGGSLKLSCAASGFTFSRFGMHWVRQTPEKRLEWVAYISSGSSTIYYADTVKGRFTISRDNAKNTLYLQMSSLRSEDTAIYYCARSGGIERYDGTYYVMDYWGQGTTLTVSSGGGGSGGGGSGGGGSDIVLTQSPASLTVSLGQRATISCRASESVDYYGKSFMNWYQQKPGQPPKLLIYAASNQGSGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSKEVPWTFGAGTKLEIKRAAAKGEFGGGGSGGGGSENLYFQ
N.A.
EVKLVESGGGLVKPGGSLKLSCAASGFTFSRFGMHWVRQTPEKRLEWVAYISSGSSTIYYADTVKGRFTISRDNAKNTLYLQMSSLRSEDTAIYYCARSGGIERYDGTYYVMDYWGQGTTLTVSSGGGGSGGGGSGGGGSDIVLTQSPASLTVSLGQRATISCRASESVDYYGKSFMNWYQQKPGQPPKLLIYAASNQGSGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSKEVPWTFGAGTKLEIK
N.A.
17.60996
0
277
0
238
0
251
0
0
anti-hiv scfv
N.A.
mus musculus
N.A.
F
peptide
utag
human immunodeficiency virus 1
30
17
0.85
H_only
train
8v8f_D
8v8f
the co-crystal structure of anti-hiv scfv and utag
no
peptide binding protein
2023-12-05
2024-12-11
x-ray diffraction
2.27
0.275
0.225
N.A.
N.A.
0
auth_asym_id
scFv
N.A.
N.A.
D
N.A.
MAEVKLVESGGGLVKPGGSLKLSCAASGFTFSRFGMHWVRQTPEKRLEWVAYISSGSSTIYYADTVKGRFTISRDNAKNTLYLQMSSLRSEDTAIYYCARSGGIERYDGTYYVMDYWGQGTTLTVSSGGGGSGGGGSGGGGSDIVLTQSPASLTVSLGQRATISCRASESVDYYGKSFMNWYQQKPGQPPKLLIYAASNQGSGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSKEVPWTFGAGTKLEIKRAAAKGEFGGGGSGGGGSENLYFQ
N.A.
AEVKLVESGGGLVKPGGSLKLSCAASGFTFSRFGMHWVRQTPEKRLEWVAYISSGSSTIYYADTVKGRFTISRDNAKNTLYLQMSSLRSEDTAIYYCARSGGIERYDGTYYVMDYWGQGTTLTVSSGGGGSGGGGSGGGGSDIVLTQSPASLTVSLGQRATISCRASESVDYYGKSFMNWYQQKPGQPPKLLIYAASNQGSGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSKEVPWTFGAGTKLEIKR
N.A.
17.727905
0
277
0
240
0
253
0
0
anti-hiv scfv
N.A.
mus musculus
N.A.
G
peptide
utag
human immunodeficiency virus 1
32
18
0.82
H_only
train
8v8f_A
8v8f
the co-crystal structure of anti-hiv scfv and utag
no
peptide binding protein
2023-12-05
2024-12-11
x-ray diffraction
2.27
0.275
0.225
N.A.
N.A.
0
auth_asym_id
scFv
N.A.
N.A.
A
N.A.
MAEVKLVESGGGLVKPGGSLKLSCAASGFTFSRFGMHWVRQTPEKRLEWVAYISSGSSTIYYADTVKGRFTISRDNAKNTLYLQMSSLRSEDTAIYYCARSGGIERYDGTYYVMDYWGQGTTLTVSSGGGGSGGGGSGGGGSDIVLTQSPASLTVSLGQRATISCRASESVDYYGKSFMNWYQQKPGQPPKLLIYAASNQGSGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSKEVPWTFGAGTKLEIKRAAAKGEFGGGGSGGGGSENLYFQ
N.A.
EVKLVESGGGLVKPGGSLKLSCAASGFTFSRFGMHWVRQTPEKRLEWVAYISSGSSTIYYADTVKGRFTISRDNAKNTLYLQMSSLRSEDTAIYYCARSGGIERYDGTYYVMDYWGQGTTLTVSSGGGGSGGGGSGGGGSDIVLTQSPASLTVSLGQRATISCRASESVDYYGKSFMNWYQQKPGQPPKLLIYAASNQGSGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSKEVPWTFGAGTKLEIK
N.A.
17.612448
0
277
0
239
0
251
0
0
anti-hiv scfv
N.A.
mus musculus
N.A.
H
peptide
utag
human immunodeficiency virus 1
31
18
0.86
H_only
train
8xbh_S
8xbh
human gpr34 -gi complex bound to m1
no
membrane protein
2023-12-06
2023-12-27
electron microscopy
2.83
N.A.
N.A.
38326347
10.1038/s41467-024-45046-z
0
auth_asym_id
scFv
N.A.
N.A.
S
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAASSEDLYFQ
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.331987
0
260
0
232
0
246
0
0
scfv16
N.A.
mus musculus
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;rattus norvegicus
33;21
21;9
0.91;0.75
H_only
train
8xbe_S
8xbe
human gpr34 -gi complex bound to s3e-lysops
no
membrane protein
2023-12-06
2024-05-15
electron microscopy
3.4
N.A.
N.A.
38326347
10.1038/s41467-024-45046-z
0
auth_asym_id
scFv
N.A.
N.A.
S
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAASSEDLYFQ
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.440153
0
260
0
232
0
246
0
0
scfv16
N.A.
mus musculus
N.A.
B;C
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;rattus norvegicus
31;22
19;8
0.9;0.73
H_only
train
8xbf_D_E
8xbf
cryo-em structure of sars-cov-2 s-bq.1 in complex with antibody o5c2
yes
viral protein
2023-12-06
2024-06-19
electron microscopy
3.6
N.A.
N.A.
38775156
10.1172/jci.insight.179726
0
auth_asym_id
VH:VL
IGHV3
IGKV1
D
E
TRVEVQLVESGGGLIQPGGSLRLSCAASGIIVSRNYMSWVRQAPGKGLEWVSILYAGGSSFYAEPVQGRFTVSRDNSKNTLFLEMNSLRVEDTAVYYCARDLQWGIDIWGQGAMVTVSSAST
DIQMTQTPPSLSASVGDRVSISCRASQSTGSWLAWYQQKPGKAPKLLIYKTSSLESGVPSRFSGSGSGTEFTLTISSLQPDDVATYYCQHYDTYSSTFGQGTKVEIKRT
VQLVESGGGLIQPGGSLRLSCAASGIIVSRNYMSWVRQAPGKGLEWVSILYAGGSSFYAEPVQGRFTVSRDNSKNTLFLEMNSLRVEDTAVYYCARDLQWGIDIWGQGAMVTVS
DIQMTQTPPSLSASVGDRVSISCRASQSTGSWLAWYQQKPGKAPKLLIYKTSSLESGVPSRFSGSGSGTEFTLTISSLQPDDVATYYCQHYDTYSSTFGQGTKVEIKRT
13.077972
13.345916
122
109
114
109
114
109
31
o5c2, heavy chain
o5c2, light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
51
15
0.71
HL
train
8xbf_F_G
8xbf
cryo-em structure of sars-cov-2 s-bq.1 in complex with antibody o5c2
yes
viral protein
2023-12-06
2024-06-19
electron microscopy
3.6
N.A.
N.A.
38775156
10.1172/jci.insight.179726
0
auth_asym_id
VH:VL
IGHV3
IGKV1
F
G
TRVEVQLVESGGGLIQPGGSLRLSCAASGIIVSRNYMSWVRQAPGKGLEWVSILYAGGSSFYAEPVQGRFTVSRDNSKNTLFLEMNSLRVEDTAVYYCARDLQWGIDIWGQGAMVTVSSAST
DIQMTQTPPSLSASVGDRVSISCRASQSTGSWLAWYQQKPGKAPKLLIYKTSSLESGVPSRFSGSGSGTEFTLTISSLQPDDVATYYCQHYDTYSSTFGQGTKVEIKRT
VQLVESGGGLIQPGGSLRLSCAASGIIVSRNYMSWVRQAPGKGLEWVSILYAGGSSFYAEPVQGRFTVSRDNSKNTLFLEMNSLRVEDTAVYYCARDLQWGIDIWGQGAMVTVS
DIQMTQTPPSLSASVGDRVSISCRASQSTGSWLAWYQQKPGKAPKLLIYKTSSLESGVPSRFSGSGSGTEFTLTISSLQPDDVATYYCQHYDTYSSTFGQGTKVEIKRT
12.984794
13.565049
122
109
114
109
114
109
30
o5c2, heavy chain
o5c2, light chain
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
24
6
0.55
HL
train
8rda_H_L
8rda
crystal structure of haemophilus influenzae type b (hib) dp2 oligosaccharide bound to fab ca4
no
immune system
2023-12-07
2024-05-15
x-ray diffraction
2.29
0.27
0.226
38799664
10.1021/acscentsci.3c01515
0
auth_asym_id
FabH:FabL
IGHV3
IGKV3
H
L
EVQLVESGGGLVTPGGSLRLSCAASGFTFNTYSMNWVRQAPGKGLEWVSSISRSSDYIYYADSVKGRFTISRDNAKNSVYLQMTSLRDEDTAVYYCARDPGGMPTTVTTWLYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
EIVLTQSPGTLSLSPGERATLSCRASQSVTSNYLAWYQQKPGQAPRLLIYDTSRRATGIPDRFSGSGSATDFTLTISRLEPDDFAIYYCQQYGSSPPVTFGHGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVTPGGSLRLSCAASGFTFNTYSMNWVRQAPGKGLEWVSSISRSSDYIYYADSVKGRFTISRDNAKNSVYLQMTSLRDEDTAVYYCARDPGGMPTTVTTWLYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
EIVLTQSPGTLSLSPGERATLSCRASQSVTSNYLAWYQQKPGQAPRLLIYDTSRRATGIPDRFSGSGSATDFTLTISRLEPDDFAIYYCQQYGSSPPVTFGHGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
21.603657
23.11482
226
216
222
216
224
216
96
fab ca4 h chain
fab ca4 l chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
8v9d_I_J
8v9d
structure of human aqp4 with a pathogenic autoantibody - rab 186
no
transport protein/immune system
2023-12-07
2024-12-11
electron microscopy
2.9
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV4
IGKV3
I
J
SQVQLQESGPGLVKPSQTLPLTCTVSGGYISSGSHQWGWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARVNYDLLTGRANFFDPWGQGTPVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
EIVLTQSPGTLSLSPGERATLSCRASQSVSSRSVAWYQQKPGQAPRLLIYGASNRATGIPDRFSGSGSGTDFTLTISRLEPEDFVVFYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLQESGPGLVKPSQTLPLTCTVSGGYISSGSHQWGWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARVNYDLLTGRANFFDPWGQGTPVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
EIVLTQSPGTLSLSPGERATLSCRASQSVSSRSVAWYQQKPGQAPRLLIYGASNRATGIPDRFSGSGSGTDFTLTISRLEPEDFVVFYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
23.48058
23.145472
233
215
228
215
228
215
98
rab 186 heavy chain
rab 186 light chain
homo sapiens
homo sapiens
A;B
protein;protein
aquaporin-4;aquaporin-4
homo sapiens;homo sapiens
16;25
7;15
1.0;0.94
HL
train
8v9d_K_L
8v9d
structure of human aqp4 with a pathogenic autoantibody - rab 186
no
transport protein/immune system
2023-12-07
2024-12-11
electron microscopy
2.9
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV4
IGKV3
K
L
SQVQLQESGPGLVKPSQTLPLTCTVSGGYISSGSHQWGWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARVNYDLLTGRANFFDPWGQGTPVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
EIVLTQSPGTLSLSPGERATLSCRASQSVSSRSVAWYQQKPGQAPRLLIYGASNRATGIPDRFSGSGSGTDFTLTISRLEPEDFVVFYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLQESGPGLVKPSQTLPLTCTVSGGYISSGSHQWGWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARVNYDLLTGRANFFDPWGQGTPVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
EIVLTQSPGTLSLSPGERATLSCRASQSVSSRSVAWYQQKPGQAPRLLIYGASNRATGIPDRFSGSGSGTDFTLTISRLEPEDFVVFYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
23.48021
23.10452
233
215
228
215
228
215
99
rab 186 heavy chain
rab 186 light chain
homo sapiens
homo sapiens
B;C
protein;protein
aquaporin-4;aquaporin-4
homo sapiens;homo sapiens
15;25
6;15
1.0;0.94
HL
train
8v9d_M_N
8v9d
structure of human aqp4 with a pathogenic autoantibody - rab 186
no
transport protein/immune system
2023-12-07
2024-12-11
electron microscopy
2.9
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV4
IGKV3
M
N
SQVQLQESGPGLVKPSQTLPLTCTVSGGYISSGSHQWGWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARVNYDLLTGRANFFDPWGQGTPVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
EIVLTQSPGTLSLSPGERATLSCRASQSVSSRSVAWYQQKPGQAPRLLIYGASNRATGIPDRFSGSGSGTDFTLTISRLEPEDFVVFYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLQESGPGLVKPSQTLPLTCTVSGGYISSGSHQWGWIRQPAGKGLEWIGRIYTSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARVNYDLLTGRANFFDPWGQGTPVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
EIVLTQSPGTLSLSPGERATLSCRASQSVSSRSVAWYQQKPGQAPRLLIYGASNRATGIPDRFSGSGSGTDFTLTISRLEPEDFVVFYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
23.476091
23.126467
233
215
228
215
228
215
96
rab 186 heavy chain
rab 186 light chain
homo sapiens
homo sapiens
C;D
protein;protein
aquaporin-4;aquaporin-4
homo sapiens;homo sapiens
16;25
7;15
1.0;0.94
HL
train
8xcd_H_L
8xcd
macaca fascicularis ntcp in complex with yn69083 fab
no
transport protein/immune system
2023-12-08
2024-11-13
electron microscopy
3.49
N.A.
N.A.
39455604
10.1038/s41467-024-53533-6
0
auth_asym_id
FabH:FabL
IGHV1
IGKV6
H
L
EVQLQQPGAELVKPGASVKLSCKTSGYTFTNYWMKWVKQRPGQGLEWIGEINPSNGGTNYNGKFKSKASLTVDKSSSTAYMQLSSLTSEDSAVYYCTILVYDAYYVFAMDYWGLGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLT
DIVMTQSPAIMSASPGQKVTITCSASSSVNYMHWYQQKLGSSPKLWIYDTSKLALGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSYPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVQLQQPGAELVKPGASVKLSCKTSGYTFTNYWMKWVKQRPGQGLEWIGEINPSNGGTNYNGKFKSKASLTVDKSSSTAYMQLSSLTSEDSAVYYCTILVYDAYYVFAMDYWGLGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC
DIVMTQSPAIMSASPGQKVTITCSASSSVNYMHWYQQKLGSSPKLWIYDTSKLALGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSYPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
22.965591
23.380657
255
213
224
213
224
213
97
yn69083 fab heavy chain
yn69083 fab light chain
mus musculus
mus musculus
A
protein
solute carrier family 10 member a1
macaca fascicularis
54
20
0.8
HL
train
8v9x_A
8v9x
x-ray crystal structure of jgfn4 complex with fentanyl
no
antitoxin
2023-12-10
2024-08-07
x-ray diffraction
1.55
0.218
0.187
38945452
10.1016/j.jbc.2024.107502
0
auth_asym_id
VH
IGHV3
N.A.
A
N.A.
MQVQLVESGGGLAQAGGSLQLSCAASGSTSRVNAMGWYRQTPGKERELVAAIDRSGATVYSESVRGRFTISKNDAKNIVWLQMNNLTTEDTAVYYCRSGVLGSWGLGTQVTVSSHHHHHH
N.A.
MQVQLVESGGGLAQAGGSLQLSCAASGSTSRVNAMGWYRQTPGKERELVAAIDRSGATVYSESVRGRFTISKNDAKNIVWLQMNNLTTEDTAVYYCRSGVLGSWGLGTQVTVSS
N.A.
16.002045
0
120
0
114
0
114
0
0
jgfn4
N.A.
camelidae
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
8v9y_A
8v9y
x-ray crystal structure of nanobody jgfn4
no
antitoxin
2023-12-10
2024-08-07
x-ray diffraction
1.76
0.232
0.191
38945452
10.1016/j.jbc.2024.107502
0
auth_asym_id
VHH
IGHV3
N.A.
A
N.A.
MQVQLVESGGGLAQAGGSLQLSCAASGSTSRVNAMGWYRQTPGKERELVAAIDRSGATVYSESVRGRFTISKNDAKNIVWLQMNNLTTEDTAVYYCRSGVLGSWGLGTQVTVSSHHHHHH
N.A.
VQLVESGGGLAQAGGSLQLSCAASGSTSRVNAMGWYRQTPGKERELVAAIDRSGATVYSESVRGRFTISKNDAKNIVWLQMNNLTTEDTAVYYCRSGVLGSWGLGTQVTVSSH
N.A.
13.401559
0
120
0
113
0
113
0
0
jgfn4
N.A.
camelidae
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
8va0_A
8va0
x-ray crystal structure of jgfn4 n76d complexed with fentanyl in dimer form
no
antitoxin
2023-12-10
2024-08-07
x-ray diffraction
1.85
0.24
0.203
38945452
10.1016/j.jbc.2024.107502
0
auth_asym_id
VH
IGHV3
N.A.
A
N.A.
MQVQLVESGGGLAQAGGSLQLSCAASGSTSRVNAMGWYRQTPGKERELVAAIDRSGATVYSESVRGRFTISKNDAKDIVWLQMNNLTTEDTAVYYCRSGVLGSWGLGTQVTVSSHHHHHH
N.A.
QVQLVESGGGLAQAGGSLQLSCAASGSTSRVNAMGWYRQTPGKERELVAAIDRSGATVYSESVRGRFTISKNDAKDIVWLQMNNLTTEDTAVYYCRSGVLGSWGLGTQVTVSS
N.A.
16.140997
0
120
0
113
0
113
0
0
jgfn4
N.A.
camelidae
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
8va0_B
8va0
x-ray crystal structure of jgfn4 n76d complexed with fentanyl in dimer form
no
antitoxin
2023-12-10
2024-08-07
x-ray diffraction
1.85
0.24
0.203
38945452
10.1016/j.jbc.2024.107502
0
auth_asym_id
VH
IGHV3
N.A.
B
N.A.
MQVQLVESGGGLAQAGGSLQLSCAASGSTSRVNAMGWYRQTPGKERELVAAIDRSGATVYSESVRGRFTISKNDAKDIVWLQMNNLTTEDTAVYYCRSGVLGSWGLGTQVTVSSHHHHHH
N.A.
QVQLVESGGGLAQAGGSLQLSCAASGSTSRVNAMGWYRQTPGKERELVAAIDRSGATVYSESVRGRFTISKNDAKDIVWLQMNNLTTEDTAVYYCRSGVLGSWGLGTQVTVSS
N.A.
16.124352
0
120
0
113
0
113
0
0
jgfn4
N.A.
camelidae
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
8xe9_A_B
8xe9
xbb.1.5 rbd in complex with bd55-1205
yes
viral protein/immune system
2023-12-11
2024-03-06
electron microscopy
3.3
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV3
IGKV3
A
B
EVQLVESGGGLVQPGGSLRLSCAVSGFTVSRNYMTWARQAPGKGPEWVSVIYPGGSTFYADSVKGRFTISRDSSKNILYLQMNSLRVDDTAVYYCARDLTIRGEASWGQGTLVTVSS
EIVMTQSPATLAVSPGERATLSCRASESFNSNLAWYQQKPGQAPRLLIYGASTRASDVPARFSGSGSGTEFTLTISSVQSEDFAVYYCQQYGDWPLWTFGQGTKVEI
EVQLVESGGGLVQPGGSLRLSCAVSGFTVSRNYMTWARQAPGKGPEWVSVIYPGGSTFYADSVKGRFTISRDSSKNILYLQMNSLRVDDTAVYYCARDLTIRGEASWGQGTLVTVSS
EIVMTQSPATLAVSPGERATLSCRASESFNSNLAWYQQKPGQAPRLLIYGASTRASDVPARFSGSGSGTEFTLTISSVQSEDFAVYYCQQYGDWPLWTFGQGTKVEI
13.662628
13.075096
117
107
117
107
117
107
42
bd55-1205 heavy chain
bd55-1205 light chain
homo sapiens
homo sapiens
C
protein
spike protein s2'
severe acute respiratory syndrome coronavirus 2
55
21
0.78
HL
train
8xea_H_J
8xea
xbb.1.5 spike protein in complex with bd55-1205
yes
viral protein/immune system
2023-12-11
2024-04-24
electron microscopy
3.42
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV3
IGKV3
H
J
EVQLVESGGGLVQPGGSLRLSCAVSGFTVSRNYMTWARQAPGKGPEWVSVIYPGGSTFYADSVKGRFTISRDSSKNILYLQMNSLRVDDTAVYYCARDLTIRGEASWGQGTLVTVSS
EIVMTQSPATLAVSPGERATLSCRASESFNSNLAWYQQKPGQAPRLLIYGASTRASDVPARFSGSGSGTEFTLTISSVQSEDFAVYYCQQYGDWPLWTFGQGTKVEI
EVQLVESGGGLVQPGGSLRLSCAVSGFTVSRNYMTWARQAPGKGPEWVSVIYPGGSTFYADSVKGRFTISRDSSKNILYLQMNSLRVDDTAVYYCARDLTIRGEASWGQGTLVTVSS
EIVMTQSPATLAVSPGERATLSCRASESFNSNLAWYQQKPGQAPRLLIYGASTRASDVPARFSGSGSGTEFTLTISSVQSEDFAVYYCQQYGDWPLWTFGQGTKVEI
13.643689
13.012639
117
107
117
107
117
107
43
bd55-1205 heavy chain
bd55-1205 light chain
homo sapiens
homo sapiens
D
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
55
21
0.81
HL
train
8xea_A_B
8xea
xbb.1.5 spike protein in complex with bd55-1205
yes
viral protein/immune system
2023-12-11
2024-04-24
electron microscopy
3.42
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV3
IGKV3
A
B
EVQLVESGGGLVQPGGSLRLSCAVSGFTVSRNYMTWARQAPGKGPEWVSVIYPGGSTFYADSVKGRFTISRDSSKNILYLQMNSLRVDDTAVYYCARDLTIRGEASWGQGTLVTVSS
EIVMTQSPATLAVSPGERATLSCRASESFNSNLAWYQQKPGQAPRLLIYGASTRASDVPARFSGSGSGTEFTLTISSVQSEDFAVYYCQQYGDWPLWTFGQGTKVEI
EVQLVESGGGLVQPGGSLRLSCAVSGFTVSRNYMTWARQAPGKGPEWVSVIYPGGSTFYADSVKGRFTISRDSSKNILYLQMNSLRVDDTAVYYCARDLTIRGEASWGQGTLVTVSS
EIVMTQSPATLAVSPGERATLSCRASESFNSNLAWYQQKPGQAPRLLIYGASTRASDVPARFSGSGSGTEFTLTISSVQSEDFAVYYCQQYGDWPLWTFGQGTKVEI
13.591958
13.028185
117
107
117
107
117
107
45
bd55-1205 heavy chain
bd55-1205 light chain
homo sapiens
homo sapiens
E
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
56
21
0.78
HL
train
8xea_G_I
8xea
xbb.1.5 spike protein in complex with bd55-1205
yes
viral protein/immune system
2023-12-11
2024-04-24
electron microscopy
3.42
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV3
IGKV3
G
I
EVQLVESGGGLVQPGGSLRLSCAVSGFTVSRNYMTWARQAPGKGPEWVSVIYPGGSTFYADSVKGRFTISRDSSKNILYLQMNSLRVDDTAVYYCARDLTIRGEASWGQGTLVTVSS
EIVMTQSPATLAVSPGERATLSCRASESFNSNLAWYQQKPGQAPRLLIYGASTRASDVPARFSGSGSGTEFTLTISSVQSEDFAVYYCQQYGDWPLWTFGQGTKVEI
EVQLVESGGGLVQPGGSLRLSCAVSGFTVSRNYMTWARQAPGKGPEWVSVIYPGGSTFYADSVKGRFTISRDSSKNILYLQMNSLRVDDTAVYYCARDLTIRGEASWGQGTLVTVSS
EIVMTQSPATLAVSPGERATLSCRASESFNSNLAWYQQKPGQAPRLLIYGASTRASDVPARFSGSGSGTEFTLTISSVQSEDFAVYYCQQYGDWPLWTFGQGTKVEI
13.616403
13.030162
117
107
117
107
117
107
45
bd55-1205 heavy chain
bd55-1205 light chain
homo sapiens
homo sapiens
F
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
57
21
0.78
HL
train