PDB_ID_chain stringlengths 6 10 | PDB_ID stringlengths 4 4 | Title stringlengths 4 230 | Mutation(s) stringclasses 2
values | Classification stringclasses 305
values | Deposit_date stringdate 1976-03-17 00:00:00 2026-01-20 00:00:00 | Release_date stringdate 1976-05-19 00:00:00 2026-02-25 00:00:00 | Method stringclasses 5
values | Resolution stringclasses 459
values | R_free stringclasses 227
values | R_work stringclasses 211
values | PMID stringlengths 4 8 | DOI stringlengths 4 68 | Model_index int64 0 76 | Asym_ID_type stringclasses 2
values | Ab_type stringclasses 30
values | H_subgroup stringclasses 8
values | L_subgroup stringclasses 19
values | H_chain_ID stringclasses 60
values | L_chain_ID stringclasses 58
values | H_fas_seq stringlengths 4 919 | L_fas_seq stringlengths 4 627 | H_filled_pdb_seq stringlengths 4 896 | L_filled_pdb_seq stringlengths 4 523 | H_mean_radius float64 0 79.7 | L_mean_radius float64 0 84.3 | H_fas_seq_len int64 0 919 | L_fas_seq_len int64 0 627 | H_pdb_seq_len int64 0 879 | L_pdb_seq_len int64 0 523 | H_filled_seq_len int64 0 896 | L_filled_seq_len int64 0 523 | HL_inf_res_num int64 0 175 | H_mol_name stringlengths 2 331 | L_mol_name stringlengths 2 151 | H_species stringclasses 68
values | L_species stringclasses 42
values | Ag_chain_ID(s) stringclasses 279
values | Ag_type(s) stringclasses 16
values | Ag_mol_name(s) stringlengths 2 390 | Ag_species stringclasses 743
values | Ab_ag_inf_res_num stringlengths 1 11 | CDR_inf_res_num stringclasses 444
values | CDR_inf_res_ratio stringlengths 1 19 | hl_label stringclasses 3
values | split stringclasses 1
value |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
9j9z_H_L | 9j9z | cryo-em structure of outward state anhydromuropeptide permease (ampg) complex with glcnac-1,6-anhmurnac | yes | membrane protein | 2024-08-23 | 2025-07-16 | electron microscopy | 2.97 | N.A. | N.A. | 40593790 | 10.1038/s41467-025-61169-3 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | EVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.641306 | 22.649689 | 225 | 212 | 225 | 212 | 225 | 212 | 102 | anti-bril fab heavy chain | anti-bril fab light chain | homo sapiens | homo sapiens | A | protein | muropeptide transporter,soluble cytochrome b562 | yokenella regensburgei | 49 | 20 | 0.74 | HL | train |
9j9z_K | 9j9z | cryo-em structure of outward state anhydromuropeptide permease (ampg) complex with glcnac-1,6-anhmurnac | yes | membrane protein | 2024-08-23 | 2025-07-16 | electron microscopy | 2.97 | N.A. | N.A. | 40593790 | 10.1038/s41467-025-61169-3 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | K | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS | N.A. | 13.844257 | 0 | 120 | 0 | 120 | 0 | 120 | 0 | 0 | anti-bril fab nanobody | N.A. | synthetic construct | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9jbq_A_B | 9jbq | structure of the complex between h1f3 fab and pcrv fragment | no | antimicrobial protein/immune system | 2024-08-27 | 2024-09-11 | x-ray diffraction | 2 | 0.216 | 0.169 | 39269189 | 10.1128/aac.00694-24 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | A | B | QVQLVQSGAEVKKPGASVKVSCKASGYSFTSYWMHWVRQAPGQGLEWMGEINPSNGRTNYNEKFNTRVTMTRDTSTSTVYMELSSLRSEDTAVYYCVLYGNYVVYYTMDYWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPP | DIQLTQSPSFLSASVGDRVTITCSASTSVSYMEWYQQKPGKAPKLLIYTTSKLASGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCHQWRNYPFTFGQGTKLEIKRAVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKKPGASVKVSCKASGYSFTSYWMHWVRQAPGQGLEWMGEINPSNGRTNYNEKFNTRVTMTRDTSTSTVYMELSSLRSEDTAVYYCVLYGNYVVYYTMDYWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVE | DIQLTQSPSFLSASVGDRVTITCSASTSVSYMEWYQQKPGKAPKLLIYTTSKLASGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCHQWRNYPFTFGQGTKLEIKRAVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 21.442331 | 22.883596 | 226 | 213 | 209 | 212 | 219 | 212 | 92 | heavy chain | light chain | homo sapiens | homo sapiens | C | protein | pcrv | pseudomonas aeruginosa | 46 | 18 | 0.82 | HL | train |
9dd6_H_L | 9dd6 | cryo-em structure of neutralizing murine antibody ws.hsv-1.24 in complex with hsv-1 glycoprotein b trimer gb-ecto.516p.531e | yes | viral protein | 2024-08-27 | 2025-09-10 | electron microscopy | 3.1 | N.A. | N.A. | 41174178 | 10.1038/s41564-025-02153-x | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | H | L | QVQLKESGPGLVAPSQSLSITCTVSGFSLTTYGVTWVRQPPGKGLEWLGVIWGDGSTNYHSDLISRLSITKDNSKSQVFLKLSSLQADDTATYYCVSYYGYFDHWGQGTTLTVSSASTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCG | DIQMTQSPSSLSASLGERVSLTCRASQDIGSSLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKRTDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | QVQLKESGPGLVAPSQSLSITCTVSGFSLTTYGVTWVRQPPGKGLEWLGVIWGDGSTNYHSDLISRLSITKDNSKSQVFLKLSSLQADDTATYYCVSYYGYFDHWGQGTTLTVSS | DIQMTQSPSSLSASLGERVSLTCRASQDIGSSLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIK | 13.493567 | 13.206995 | 218 | 214 | 115 | 107 | 115 | 107 | 31 | ws.hsv-1.24 heavy chain | ws.hsv-1.24 light chain | mus musculus | mus musculus | E | protein | glycoprotein b | human alphaherpesvirus 1 | 51 | 19 | 0.73 | HL | train |
9dd6_I_M | 9dd6 | cryo-em structure of neutralizing murine antibody ws.hsv-1.24 in complex with hsv-1 glycoprotein b trimer gb-ecto.516p.531e | yes | viral protein | 2024-08-27 | 2025-09-10 | electron microscopy | 3.1 | N.A. | N.A. | 41174178 | 10.1038/s41564-025-02153-x | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | I | M | QVQLKESGPGLVAPSQSLSITCTVSGFSLTTYGVTWVRQPPGKGLEWLGVIWGDGSTNYHSDLISRLSITKDNSKSQVFLKLSSLQADDTATYYCVSYYGYFDHWGQGTTLTVSSASTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCG | DIQMTQSPSSLSASLGERVSLTCRASQDIGSSLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKRTDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | QVQLKESGPGLVAPSQSLSITCTVSGFSLTTYGVTWVRQPPGKGLEWLGVIWGDGSTNYHSDLISRLSITKDNSKSQVFLKLSSLQADDTATYYCVSYYGYFDHWGQGTTLTVSS | DIQMTQSPSSLSASLGERVSLTCRASQDIGSSLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIK | 13.493548 | 13.206998 | 218 | 214 | 115 | 107 | 115 | 107 | 31 | ws.hsv-1.24 heavy chain | ws.hsv-1.24 light chain | mus musculus | mus musculus | F | protein | glycoprotein b | human alphaherpesvirus 1 | 51 | 19 | 0.73 | HL | train |
9dd6_J_N | 9dd6 | cryo-em structure of neutralizing murine antibody ws.hsv-1.24 in complex with hsv-1 glycoprotein b trimer gb-ecto.516p.531e | yes | viral protein | 2024-08-27 | 2025-09-10 | electron microscopy | 3.1 | N.A. | N.A. | 41174178 | 10.1038/s41564-025-02153-x | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | J | N | QVQLKESGPGLVAPSQSLSITCTVSGFSLTTYGVTWVRQPPGKGLEWLGVIWGDGSTNYHSDLISRLSITKDNSKSQVFLKLSSLQADDTATYYCVSYYGYFDHWGQGTTLTVSSASTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCG | DIQMTQSPSSLSASLGERVSLTCRASQDIGSSLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKRTDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | QVQLKESGPGLVAPSQSLSITCTVSGFSLTTYGVTWVRQPPGKGLEWLGVIWGDGSTNYHSDLISRLSITKDNSKSQVFLKLSSLQADDTATYYCVSYYGYFDHWGQGTTLTVSS | DIQMTQSPSSLSASLGERVSLTCRASQDIGSSLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIK | 13.493574 | 13.206997 | 218 | 214 | 115 | 107 | 115 | 107 | 31 | ws.hsv-1.24 heavy chain | ws.hsv-1.24 light chain | mus musculus | mus musculus | G | protein | glycoprotein b | human alphaherpesvirus 1 | 51 | 19 | 0.73 | HL | train |
9glz_C | 9glz | kras-g12d-gmppnp in complex with the nanobody km12-am | yes | hydrolase | 2024-08-28 | 2025-12-10 | x-ray diffraction | 2.1 | 0.277 | 0.239 | 41330964 | 10.1038/s41467-025-65844-3 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | QVQLVESVGGLVQPGDSLRLSCAASGPSLDLYGTAWFRQVPGKEREFVSHIDRSGITIYADSVEGRFTISRDSAKRTVYLQMNTLAPEDTAAYYCAATRSNFYFPREDMSYDSWGQGTLVTVSSGGGGSEFRHDS | N.A. | VQLVESVGGLVQPGDSLRLSCAASGPSLDLYGTAWFRQVPGKEREFVSHIDRSGITIYADSVEGRFTISRDSAKRTVYLQMNTLAPEDTAAYYCAATRSNFYFPREDMSYDSWGQGTLVT | N.A. | 13.561303 | 0 | 135 | 0 | 116 | 0 | 120 | 0 | 0 | nanobody km12-am | N.A. | homo sapiens | N.A. | A | protein | gtpase kras | homo sapiens | 29 | 13 | 0.87 | H_only | train |
9glz_D | 9glz | kras-g12d-gmppnp in complex with the nanobody km12-am | yes | hydrolase | 2024-08-28 | 2025-12-10 | x-ray diffraction | 2.1 | 0.277 | 0.239 | 41330964 | 10.1038/s41467-025-65844-3 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | QVQLVESVGGLVQPGDSLRLSCAASGPSLDLYGTAWFRQVPGKEREFVSHIDRSGITIYADSVEGRFTISRDSAKRTVYLQMNTLAPEDTAAYYCAATRSNFYFPREDMSYDSWGQGTLVTVSSGGGGSEFRHDS | N.A. | QLVESVGGLVQPGDSLRLSCAASGPSLDLYGTAWFRQVPGKEREFVSHIDRSGITIYADSVEGRFTISRDSAKRTVYLQMNTLAPEDTAAYYCAATRSNFYFPREDMSYDSWGQGTLVTV | N.A. | 13.150655 | 0 | 135 | 0 | 104 | 0 | 120 | 0 | 0 | nanobody km12-am | N.A. | homo sapiens | N.A. | B | protein | gtpase kras | homo sapiens | 32 | 13 | 0.87 | H_only | train |
9dez_I_M | 9dez | pdcov s trimer bound by three copies of pd41 fab | no | viral protein | 2024-08-29 | 2024-11-13 | electron microscopy | 2.6 | N.A. | N.A. | 39488210 | 10.1016/j.immuni.2024.10.001 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV2 | I | M | HSQLQESGPGLVKPSQTLSLTCTVSGGSISSAGYYWNWIRQHPGKGLEWIGYIYYSGNTYYNPSLKSRVTISVDTSKSQFSLKLNSVTAADTAVYYCARKIVNWFDPWGQGTLVTVSS | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSERPSGVSNRFSGSKSGNTASLTISGLQAEDEADYFCCSYAAYTTYVVFGGGTQLTVL | QLQESGPGLVKPSQTLSLTCTVSGGSISSAGYYWNWIRQHPGKGLEWIGYIYYSGNTYYNPSLKSRVTISVDTSKSQFSLKLNSVTAADTAVYYCARKIVNWFDPWGQGTLVTVSS | SALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSERPSGVSNRFSGSKSGNTASLTISGLQAEDEADYFCCSYAAYTTYVVFGGGTQLTV | 13.703156 | 13.62462 | 118 | 111 | 116 | 109 | 116 | 109 | 44 | pd41 fab variable heavy-chain | pd41 fab variable light-chain | mus musculus | mus musculus | A | protein | spike glycoprotein | porcine deltacoronavirus | 36 | 15 | 0.79 | HL | train |
9dez_H_L | 9dez | pdcov s trimer bound by three copies of pd41 fab | no | viral protein | 2024-08-29 | 2024-11-13 | electron microscopy | 2.6 | N.A. | N.A. | 39488210 | 10.1016/j.immuni.2024.10.001 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV2 | H | L | HSQLQESGPGLVKPSQTLSLTCTVSGGSISSAGYYWNWIRQHPGKGLEWIGYIYYSGNTYYNPSLKSRVTISVDTSKSQFSLKLNSVTAADTAVYYCARKIVNWFDPWGQGTLVTVSS | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSERPSGVSNRFSGSKSGNTASLTISGLQAEDEADYFCCSYAAYTTYVVFGGGTQLTVL | QLQESGPGLVKPSQTLSLTCTVSGGSISSAGYYWNWIRQHPGKGLEWIGYIYYSGNTYYNPSLKSRVTISVDTSKSQFSLKLNSVTAADTAVYYCARKIVNWFDPWGQGTLVTVSS | SALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSERPSGVSNRFSGSKSGNTASLTISGLQAEDEADYFCCSYAAYTTYVVFGGGTQLTV | 13.703118 | 13.624638 | 118 | 111 | 116 | 109 | 116 | 109 | 46 | pd41 fab variable heavy-chain | pd41 fab variable light-chain | mus musculus | mus musculus | B | protein | spike glycoprotein | porcine deltacoronavirus | 36 | 15 | 0.79 | HL | train |
9dez_J_N | 9dez | pdcov s trimer bound by three copies of pd41 fab | no | viral protein | 2024-08-29 | 2024-11-13 | electron microscopy | 2.6 | N.A. | N.A. | 39488210 | 10.1016/j.immuni.2024.10.001 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV2 | J | N | HSQLQESGPGLVKPSQTLSLTCTVSGGSISSAGYYWNWIRQHPGKGLEWIGYIYYSGNTYYNPSLKSRVTISVDTSKSQFSLKLNSVTAADTAVYYCARKIVNWFDPWGQGTLVTVSS | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSERPSGVSNRFSGSKSGNTASLTISGLQAEDEADYFCCSYAAYTTYVVFGGGTQLTVL | QLQESGPGLVKPSQTLSLTCTVSGGSISSAGYYWNWIRQHPGKGLEWIGYIYYSGNTYYNPSLKSRVTISVDTSKSQFSLKLNSVTAADTAVYYCARKIVNWFDPWGQGTLVTVSS | SALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSERPSGVSNRFSGSKSGNTASLTISGLQAEDEADYFCCSYAAYTTYVVFGGGTQLTV | 13.703117 | 13.624653 | 118 | 111 | 116 | 109 | 116 | 109 | 46 | pd41 fab variable heavy-chain | pd41 fab variable light-chain | mus musculus | mus musculus | C | protein | spike glycoprotein | porcine deltacoronavirus | 36 | 15 | 0.79 | HL | train |
9df0_H_L | 9df0 | pdcov s rbd bound to pd41 fab (local refinement) | no | viral protein | 2024-08-29 | 2024-11-13 | electron microscopy | 2.8 | N.A. | N.A. | 39488210 | 10.1016/j.immuni.2024.10.001 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV2 | H | L | HSQLQESGPGLVKPSQTLSLTCTVSGGSISSAGYYWNWIRQHPGKGLEWIGYIYYSGNTYYNPSLKSRVTISVDTSKSQFSLKLNSVTAADTAVYYCARKIVNWFDPWGQGTLVTVSS | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSERPSGVSNRFSGSKSGNTASLTISGLQAEDEADYFCCSYAGYTTYVVFGGGTQLTVL | QLQESGPGLVKPSQTLSLTCTVSGGSISSAGYYWNWIRQHPGKGLEWIGYIYYSGNTYYNPSLKSRVTISVDTSKSQFSLKLNSVTAADTAVYYCARKIVNWFDPWGQGTLVTVSS | SALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSERPSGVSNRFSGSKSGNTASLTISGLQAEDEADYFCCSYAGYTTYVVFGGGTQLTV | 13.435999 | 13.300497 | 118 | 111 | 116 | 109 | 116 | 109 | 38 | pd41 fab variable heavy-chain | pd41 fab variable light-chain | mus musculus | mus musculus | A | protein | spike glycoprotein | porcine deltacoronavirus | 29 | 13 | 0.81 | HL | train |
9det_q | 9det | human v-atpase vo subcomplex (containing subunit isoform a4) bound to nanobody and inhibitor | no | membrane protein | 2024-08-29 | 2025-09-10 | electron microscopy | 3 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | q | N.A. | MGQVQLQESGGGLVQAGGSLRLSCAGSGRTFTYHTMGWFRQAPGKEREFVASINWSDTRLYYTDSVKGRFTISRDNAKSTVYLQMNSLKPEDTAVYYCVATAMTTGATMTVDNVDYWGQGTQVTVSSAAALEVLFQGPK | N.A. | QVQLQESGGGLVQAGGSLRLSCAGSGRTFTYHTMGWFRQAPGKEREFVASINWSDTRLYYTDSVKGRFTISRDNAKSTVYLQMNSLKPEDTAVYYCVATAMTTGATMTVDNVDYWGQGTQVTVSS | N.A. | 13.845535 | 0 | 139 | 0 | 125 | 0 | 125 | 0 | 0 | anti v-atpase nanobody 2cas66 | N.A. | lama glama | N.A. | a | protein | v-type proton atpase 116 kda subunit a 4 | homo sapiens | 39 | 15 | 0.94 | H_only | train |
9gmu_D | 9gmu | structure ofhuman am ligand binding domain in complex with the acr3 nanobody | no | immune system | 2024-08-29 | 2025-09-10 | x-ray diffraction | 3.8 | 0.298 | 0.242 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | QVQLVESGGGLVQAGGSLRLSCTTSGFTFDDYAIGWFRQAPGKEREGVSCISSSEGKYYSDSAKGRFTISSDNAKNTVYLQMNNLKPEDTAVYYCAAEWNNFGRLCMYPDYWGQGTQVTVSSLEHHHHHH | N.A. | QVQLVESGGGLVQAGGSLRLSCTTSGFTFDDYAIGWFRQAPGKEREGVSCISSSEGKYYSDSAKGRFTISSDNAKNTVYLQMNNLKPEDTAVYYCAAEWNNFGRLCMYPDYWGQGTQVTVSS | N.A. | 13.761205 | 0 | 130 | 0 | 122 | 0 | 122 | 0 | 0 | acr vhh | N.A. | lama glama | N.A. | A | protein | integrin alpha-m | homo sapiens | 34 | 9 | 0.5 | H_only | train |
9gmu_C | 9gmu | structure ofhuman am ligand binding domain in complex with the acr3 nanobody | no | immune system | 2024-08-29 | 2025-09-10 | x-ray diffraction | 3.8 | 0.298 | 0.242 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | QVQLVESGGGLVQAGGSLRLSCTTSGFTFDDYAIGWFRQAPGKEREGVSCISSSEGKYYSDSAKGRFTISSDNAKNTVYLQMNNLKPEDTAVYYCAAEWNNFGRLCMYPDYWGQGTQVTVSSLEHHHHHH | N.A. | QVQLVESGGGLVQAGGSLRLSCTTSGFTFDDYAIGWFRQAPGKEREGVSCISSSEGKYYSDSAKGRFTISSDNAKNTVYLQMNNLKPEDTAVYYCAAEWNNFGRLCMYPDYWGQGTQVTVSS | N.A. | 13.758758 | 0 | 130 | 0 | 122 | 0 | 122 | 0 | 0 | acr vhh | N.A. | lama glama | N.A. | B | protein | integrin alpha-m | homo sapiens | 36 | 12 | 0.6 | H_only | train |
9jcl_N | 9jcl | adp-bound purinergic receptor 1 with l266p mutant in complex with minigs/q | yes | membrane protein/immune system | 2024-08-29 | 2025-09-10 | electron microscopy | 2.76 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | 13.396074 | 0 | 126 | 0 | 126 | 0 | 126 | 0 | 0 | nanobody 35 | N.A. | homo sapiens | N.A. | A;B | protein;protein | gnas complex locus;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 48;32 | 13;11 | 0.54;0.69 | H_only | train |
9jco_N | 9jco | cryo-em structure of the proton-sensing gpcr (gpr4)-gs protein complex at ph 6.5 | no | signaling protein | 2024-08-30 | 2025-07-09 | electron microscopy | 2.36 | N.A. | N.A. | 40555728 | 10.1038/s41421-025-00807-y | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | 13.662108 | 0 | 128 | 0 | 126 | 0 | 126 | 0 | 0 | nanobody 35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 46;32 | 15;11 | 0.65;0.69 | H_only | train |
9jcp_N | 9jcp | cryo-em structure of the proton-sensing gpcr (gpr4)-gq protein complex at ph 7.4 | no | signaling protein | 2024-08-30 | 2025-07-09 | electron microscopy | 2.55 | N.A. | N.A. | 40555728 | 10.1038/s41421-025-00807-y | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | 13.686379 | 0 | 128 | 0 | 126 | 0 | 126 | 0 | 0 | nanobody 35 | N.A. | lama glama | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(q) subunit alpha | homo sapiens;homo sapiens | 31;43 | 11;10 | 0.69;0.48 | H_only | train |
9jcq_N | 9jcq | cryo-em structure of the proton-sensing gpcr (gpr4)-gs protein complex at ph 7.4 | no | signaling protein | 2024-08-30 | 2025-07-09 | electron microscopy | 2.59 | N.A. | N.A. | 40555728 | 10.1038/s41421-025-00807-y | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | 13.727604 | 0 | 128 | 0 | 126 | 0 | 126 | 0 | 0 | nanobody 35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 49;32 | 16;12 | 0.64;0.71 | H_only | train |
9jcy_C_B | 9jcy | crystal structure of the hcov-hku1 rbd in complex with fab | no | antiviral protein | 2024-08-30 | 2025-07-30 | x-ray diffraction | 1.8 | 0.203 | 0.173 | 40681508 | 10.1038/s41467-025-62023-2 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | C | B | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGSMHYSGSSHYKPSLKSRIAMSVDTSKNQFSLNLNSVTAADTAVYYCAREGGSSGYDYVYYFDDWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHH | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGSMHYSGSSHYKPSLKSRIAMSVDTSKNQFSLNLNSVTAADTAVYYCAREGGSSGYDYVYYFDDWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 20.97465 | 23.419725 | 235 | 214 | 222 | 214 | 224 | 214 | 101 | heavy chain of fab | light chain of fab | homo sapiens | homo sapiens | A | protein | spike protein s1 | human coronavirus hku1 (isolate n1) | 62 | 21 | 0.64 | HL | train |
9jd0_E | 9jd0 | crystal structure of tmprss2 in complex with nanobody | yes | antiviral protein | 2024-08-30 | 2025-07-30 | x-ray diffraction | 2 | 0.221 | 0.188 | 40681508 | 10.1038/s41467-025-62023-2 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | AVQLQASGGGFVQPGGSLRLSCAASGKVVEQGLMGWFRQAPGKEREFVSAIQYDTKLEYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTATYYCATPQMWVQRDVQARWYWGQGTQVTVSSGSHHHHHH | N.A. | VQLQASGGGFVQPGGSLRLSCAASGKVVEQGLMGWFRQAPGKEREFVSAIQYDTKLEYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTATYYCATPQMWVQRDVQARWYWGQGTQVTVSS | N.A. | 13.867247 | 0 | 131 | 0 | 122 | 0 | 122 | 0 | 0 | nanobody | N.A. | vicugna pacos | N.A. | C | protein | transmembrane protease serine 2 catalytic chain | homo sapiens | 57 | 16 | 0.76 | H_only | train |
9jd0_F | 9jd0 | crystal structure of tmprss2 in complex with nanobody | yes | antiviral protein | 2024-08-30 | 2025-07-30 | x-ray diffraction | 2 | 0.221 | 0.188 | 40681508 | 10.1038/s41467-025-62023-2 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | AVQLQASGGGFVQPGGSLRLSCAASGKVVEQGLMGWFRQAPGKEREFVSAIQYDTKLEYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTATYYCATPQMWVQRDVQARWYWGQGTQVTVSSGSHHHHHH | N.A. | VQLQASGGGFVQPGGSLRLSCAASGKVVEQGLMGWFRQAPGKEREFVSAIQYDTKLEYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTATYYCATPQMWVQRDVQARWYWGQGTQVTV | N.A. | 13.76799 | 0 | 131 | 0 | 120 | 0 | 120 | 0 | 0 | nanobody | N.A. | vicugna pacos | N.A. | D | protein | transmembrane protease serine 2 catalytic chain | homo sapiens | 58 | 16 | 0.76 | H_only | train |
9je3_A_B | 9je3 | structure of #2-911 fab in complex with medi8852 fab | no | immune system | 2024-09-02 | 2025-09-03 | x-ray diffraction | 2.37 | 0.254 | 0.2 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGLV7 | A | B | EVQLQESGPELMKPGASVKISCKASGYSFTSYNMHWVKQSHGKSLEWIGYIDPFNDGTTYNQKFKGKATLTVDKSSSTAYMHLSSLTSEDSAVYYCAKLGPYWYFDVWGAGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP | QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHTVEKSLSRADCS | EVQLQESGPELMKPGASVKISCKASGYSFTSYNMHWVKQSHGKSLEWIGYIDPFNDGTTYNQKFKGKATLTVDKSSSTAYMHLSSLTSEDSAVYYCAKLGPYWYFDVWGAGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP | QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHTVEKSLSRADCS | 23.289835 | 23.14888 | 217 | 215 | 217 | 215 | 217 | 215 | 107 | #2-911 fab heavy chain | #2-911 fab light chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9je3_C_D | 9je3 | structure of #2-911 fab in complex with medi8852 fab | no | immune system | 2024-09-02 | 2025-09-03 | x-ray diffraction | 2.37 | 0.254 | 0.2 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV6 | IGKV1 | C | D | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSYNAVWNWIRQSPSRGLEWLGRTYYRSGWYNDYAESVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCARSGHITVFGVNVDAFDMWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRTSQSLSSYTHWYQQKPGKAPKLLIYAASSRGSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSYNAVWNWIRQSPSRGLEWLGRTYYRSGWYNDYAESVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCARSGHITVFGVNVDAFDMWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRTSQSLSSYTHWYQQKPGKAPKLLIYAASSRGSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.609783 | 22.98834 | 228 | 210 | 228 | 210 | 228 | 210 | 91 | medi8852 fab heavy chain | medi8852 fab light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9je3_E_F | 9je3 | structure of #2-911 fab in complex with medi8852 fab | no | immune system | 2024-09-02 | 2025-09-03 | x-ray diffraction | 2.37 | 0.254 | 0.2 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGLV7 | E | F | EVQLQESGPELMKPGASVKISCKASGYSFTSYNMHWVKQSHGKSLEWIGYIDPFNDGTTYNQKFKGKATLTVDKSSSTAYMHLSSLTSEDSAVYYCAKLGPYWYFDVWGAGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP | QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHTVEKSLSRADCS | EVQLQESGPELMKPGASVKISCKASGYSFTSYNMHWVKQSHGKSLEWIGYIDPFNDGTTYNQKFKGKATLTVDKSSSTAYMHLSSLTSEDSAVYYCAKLGPYWYFDVWGAGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP | QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHTVEKSLSRADC | 23.334055 | 23.146976 | 217 | 215 | 217 | 214 | 217 | 214 | 109 | #2-911 fab heavy chain | #2-911 fab light chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9je3_G_H | 9je3 | structure of #2-911 fab in complex with medi8852 fab | no | immune system | 2024-09-02 | 2025-09-03 | x-ray diffraction | 2.37 | 0.254 | 0.2 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV6 | IGKV1 | G | H | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSYNAVWNWIRQSPSRGLEWLGRTYYRSGWYNDYAESVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCARSGHITVFGVNVDAFDMWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRTSQSLSSYTHWYQQKPGKAPKLLIYAASSRGSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSYNAVWNWIRQSPSRGLEWLGRTYYRSGWYNDYAESVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCARSGHITVFGVNVDAFDMWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRTSQSLSSYTHWYQQKPGKAPKLLIYAASSRGSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.639414 | 22.958939 | 228 | 210 | 228 | 210 | 228 | 210 | 91 | medi8852 fab heavy chain | medi8852 fab light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9dh2_K_L | 9dh2 | structure of fab in complex with nkg2d extracellular domain | no | immune system | 2024-09-03 | 2024-12-04 | x-ray diffraction | 2.98 | 0.243 | 0.197 | 39582357 | 10.1080/19420862.2024.2433121 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | K | L | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYWMHWVRQAPGQGLEWIGKIDLSDSEAHFNQKFEDRATLTVDRSTSTVYMELSSLRSEDTAVYYCAKMGEFYFDYWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSSLSASVGDRVTITCRTSGNIYNYLAWYQQKPGKAPKLLIYNAKTLADAVPSRFSGSGSGTDYTLTISSLQPEDFATYYCQHFWSIPWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC | VQLVQSGAEVKKPGASVKVSCKASGYTFTSYWMHWVRQAPGQGLEWIGKIDLSDSEAHFNQKFEDRATLTVDRSTSTVYMELSSLRSEDTAVYYCAKMGEFYFDYWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRTSGNIYNYLAWYQQKPGKAPKLLIYNAKTLADAVPSRFSGSGSGTDYTLTISSLQPEDFATYYCQHFWSIPWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGE | 22.354387 | 23.323364 | 220 | 212 | 217 | 211 | 217 | 211 | 98 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | M | protein | nkg2-d type ii integral membrane protein | homo sapiens | 49 | 19 | 0.76 | HL | train |
9dh2_A_D | 9dh2 | structure of fab in complex with nkg2d extracellular domain | no | immune system | 2024-09-03 | 2024-12-04 | x-ray diffraction | 2.98 | 0.243 | 0.197 | 39582357 | 10.1080/19420862.2024.2433121 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | A | D | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYWMHWVRQAPGQGLEWIGKIDLSDSEAHFNQKFEDRATLTVDRSTSTVYMELSSLRSEDTAVYYCAKMGEFYFDYWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSSLSASVGDRVTITCRTSGNIYNYLAWYQQKPGKAPKLLIYNAKTLADAVPSRFSGSGSGTDYTLTISSLQPEDFATYYCQHFWSIPWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC | VQLVQSGAEVKKPGASVKVSCKASGYTFTSYWMHWVRQAPGQGLEWIGKIDLSDSEAHFNQKFEDRATLTVDRSTSTVYMELSSLRSEDTAVYYCAKMGEFYFDYWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRTSGNIYNYLAWYQQKPGKAPKLLIYNAKTLADAVPSRFSGSGSGTDYTLTISSLQPEDFATYYCQHFWSIPWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGE | 22.695734 | 23.016357 | 220 | 212 | 217 | 211 | 217 | 211 | 95 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | R | protein | nkg2-d type ii integral membrane protein | homo sapiens | 46 | 18 | 0.78 | HL | train |
9dh2_P_Q | 9dh2 | structure of fab in complex with nkg2d extracellular domain | no | immune system | 2024-09-03 | 2024-12-04 | x-ray diffraction | 2.98 | 0.243 | 0.197 | 39582357 | 10.1080/19420862.2024.2433121 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | P | Q | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYWMHWVRQAPGQGLEWIGKIDLSDSEAHFNQKFEDRATLTVDRSTSTVYMELSSLRSEDTAVYYCAKMGEFYFDYWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSSLSASVGDRVTITCRTSGNIYNYLAWYQQKPGKAPKLLIYNAKTLADAVPSRFSGSGSGTDYTLTISSLQPEDFATYYCQHFWSIPWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC | VQLVQSGAEVKKPGASVKVSCKASGYTFTSYWMHWVRQAPGQGLEWIGKIDLSDSEAHFNQKFEDRATLTVDRSTSTVYMELSSLRSEDTAVYYCAKMGEFYFDYWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRTSGNIYNYLAWYQQKPGKAPKLLIYNAKTLADAVPSRFSGSGSGTDYTLTISSLQPEDFATYYCQHFWSIPWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGE | 22.632874 | 23.255846 | 220 | 212 | 217 | 211 | 217 | 211 | 92 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | S | protein | nkg2-d type ii integral membrane protein | homo sapiens | 49 | 19 | 0.79 | HL | train |
9dh2_G_H | 9dh2 | structure of fab in complex with nkg2d extracellular domain | no | immune system | 2024-09-03 | 2024-12-04 | x-ray diffraction | 2.98 | 0.243 | 0.197 | 39582357 | 10.1080/19420862.2024.2433121 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | G | H | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYWMHWVRQAPGQGLEWIGKIDLSDSEAHFNQKFEDRATLTVDRSTSTVYMELSSLRSEDTAVYYCAKMGEFYFDYWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSSLSASVGDRVTITCRTSGNIYNYLAWYQQKPGKAPKLLIYNAKTLADAVPSRFSGSGSGTDYTLTISSLQPEDFATYYCQHFWSIPWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC | VQLVQSGAEVKKPGASVKVSCKASGYTFTSYWMHWVRQAPGQGLEWIGKIDLSDSEAHFNQKFEDRATLTVDRSTSTVYMELSSLRSEDTAVYYCAKMGEFYFDYWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRTSGNIYNYLAWYQQKPGKAPKLLIYNAKTLADAVPSRFSGSGSGTDYTLTISSLQPEDFATYYCQHFWSIPWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGE | 22.923819 | 22.90481 | 220 | 212 | 217 | 211 | 217 | 211 | 90 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | T | protein | nkg2-d type ii integral membrane protein | homo sapiens | 47 | 18 | 0.78 | HL | train |
9jeb_A | 9jeb | crystal structure of sars-cov-2 rbd in complex with a neutralizing antibody scfv n1 | no | viral protein/immune system | 2024-09-03 | 2025-09-03 | x-ray diffraction | 2.3 | 0.206 | 0.178 | N.A. | N.A. | 0 | auth_asym_id | scFv | N.A. | N.A. | A | N.A. | EVHLVESGGGVVQPGRSLKLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISHDGSSKFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKEFYDSGNYRPELFDYWGQGTTITVSSGGGGSGGGGSGGGGSEIVLTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPWTFGQGTKVEIK | N.A. | EVHLVESGGGVVQPGRSLKLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISHDGSSKFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKEFYDSGNYRPELFDYWGQGTTITVSSGGGGSGGGGSGGGGSEIVLTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPWTFGQGTKVEIK | N.A. | 17.34282 | 0 | 247 | 0 | 232 | 0 | 247 | 0 | 0 | n1 scfv | N.A. | homo sapiens | N.A. | B | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 56 | 23 | 0.82 | H_only | train |
9jeb_C | 9jeb | crystal structure of sars-cov-2 rbd in complex with a neutralizing antibody scfv n1 | no | viral protein/immune system | 2024-09-03 | 2025-09-03 | x-ray diffraction | 2.3 | 0.206 | 0.178 | N.A. | N.A. | 0 | auth_asym_id | scFv | N.A. | N.A. | C | N.A. | EVHLVESGGGVVQPGRSLKLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISHDGSSKFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKEFYDSGNYRPELFDYWGQGTTITVSSGGGGSGGGGSGGGGSEIVLTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPWTFGQGTKVEIK | N.A. | EVHLVESGGGVVQPGRSLKLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISHDGSSKFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKEFYDSGNYRPELFDYWGQGTTITVSSGGGGSGGGGSGGGGSEIVLTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPWTFGQGTKVEIK | N.A. | 17.339918 | 0 | 247 | 0 | 233 | 0 | 247 | 0 | 0 | n1 scfv | N.A. | homo sapiens | N.A. | D | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 55 | 24 | 0.8 | H_only | train |
9jed_S | 9jed | cryo-em structure of histamine-bound histamine receptor 4 h4r g protein complex | no | membrane protein/immune system | 2024-09-03 | 2025-09-10 | electron microscopy | 2.58 | N.A. | N.A. | 40877594 | 10.1038/s41401-025-01633-4 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.414848 | 0 | 247 | 0 | 233 | 0 | 247 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | D;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1 | homo sapiens;homo sapiens | 26;30 | 10;19 | 0.77;1.0 | H_only | train |
9jeq_S | 9jeq | cryo-em structure of histamine-bound histamine receptor 3 h3r g protein complex | no | membrane protein | 2024-09-03 | 2025-09-24 | electron microscopy | 3.05 | N.A. | N.A. | 40877594 | 10.1038/s41401-025-01633-4 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAA | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.450472 | 0 | 251 | 0 | 231 | 0 | 246 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 31;23 | 20;9 | 1.0;0.75 | H_only | train |
9jfk_N | 9jfk | cryo-em structure of [pen5]-urotensin (4-11)-bounded human urotensin receptor (uts2r)-gq complex | no | signaling protein | 2024-09-04 | 2025-12-03 | electron microscopy | 3.23 | N.A. | N.A. | 41062066 | 10.1016/j.jbc.2025.110794 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | 13.677654 | 0 | 128 | 0 | 126 | 0 | 126 | 0 | 0 | nano body 35 | N.A. | lama glama | N.A. | B;A | protein;protein | g subunit q (gi2-mini-gq chimeric);guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 46;32 | 13;12 | 0.62;0.71 | H_only | train |
9dhw_E_F | 9dhw | q23.md39 in complex with fabs from antibodies ch01 igl and 35o22 | yes | viral protein/immune system | 2024-09-04 | 2025-12-17 | electron microscopy | 3.35 | N.A. | N.A. | 41332666 | 10.1101/2024.10.04.616739 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | E | F | QGQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGLEVLFQ | QSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQSKANPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | GQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSS | SVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLG | 14.737663 | 13.338697 | 243 | 216 | 130 | 110 | 130 | 110 | 42 | 35o22 fab heavy chain | 35o22 fab light chain | homo sapiens | homo sapiens | B;A | protein;protein | q23.md39 transmembrane protein gp41;q23.md39 surface protein gp120 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 24;17 | 9;5 | 0.9;0.45 | HL | train |
9dhw_N_M | 9dhw | q23.md39 in complex with fabs from antibodies ch01 igl and 35o22 | yes | viral protein/immune system | 2024-09-04 | 2025-12-17 | electron microscopy | 3.35 | N.A. | N.A. | 41332666 | 10.1101/2024.10.04.616739 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | N | M | EVQLVESGGGVVRPGGSLRLSCAASGFTFDDYGMSWVRQAPGKGLEWVSGINWNGGSTGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYHCARGTDYTIDDQGIHYYGSGTYWYFDLWGRGTLVTVSS | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPYTFGQGTKVEIK | EVQLVESGGGVVRPGGSLRLSCAASGFTFDDYGMSWVRQAPGKGLEWVSGINWNGGSTGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYHCARGTDYTIDDQGIHYYGSGTYWYFDLWGRGTLVTVSS | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPYTFGQGTKVEIK | 14.877494 | 13.29695 | 133 | 108 | 133 | 108 | 133 | 108 | 46 | ch01 igl fab heavy chain | ch01 igl fab light chain | homo sapiens | homo sapiens | C;G | protein;protein | q23.md39 surface protein gp120;q23.md39 surface protein gp120 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 19;10 | 10;6 | 1.0;1.0 | HL | train |
9dhw_H_L | 9dhw | q23.md39 in complex with fabs from antibodies ch01 igl and 35o22 | yes | viral protein/immune system | 2024-09-04 | 2025-12-17 | electron microscopy | 3.35 | N.A. | N.A. | 41332666 | 10.1101/2024.10.04.616739 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | H | L | QGQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGLEVLFQ | QSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQSKANPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | GQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSS | SVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLG | 14.700032 | 13.416326 | 243 | 216 | 130 | 110 | 130 | 110 | 41 | 35o22 fab heavy chain | 35o22 fab light chain | homo sapiens | homo sapiens | D | protein | q23.md39 transmembrane protein gp41 | human immunodeficiency virus 1 | 25 | 10 | 0.83 | HL | train |
9goe_B | 9goe | cryo-em structure of the multiple peptide resistance factor (mprf) from pseudomonas aeruginosa bound to a synthetic nanobody (sb29) | no | membrane protein | 2024-09-05 | 2025-03-12 | electron microscopy | 3.28 | N.A. | N.A. | 40203087 | 10.1126/sciadv.ads9135 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | GSSSGVQLVESGGGLVQAGGSLRLSCAASGFPVSSAWMAWYRQAPGKEREWVAAIFSAGQKTRYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNVKDTGHWWDIYDYWGQGTQVTVSAGRAGEQKLISEEDLNSAVDHHHHHH | N.A. | GVQLVESGGGLVQAGGSLRLSCAASGFPVSSAWMAWYRQAPGKEREWVAAIFSAGQKTRYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNVKDTGHWWDIYDYWGQGTQVTV | N.A. | 14.09874 | 0 | 150 | 0 | 119 | 0 | 119 | 0 | 0 | synthetic nanobody (sybody) 29 | N.A. | synthetic construct | N.A. | A | protein | phosphatidylglycerol lysyltransferase | pseudomonas aeruginosa pao1 | 30 | 10 | 0.67 | H_only | train |
9jfy_S | 9jfy | cryo-em structure of neuropeptide ff receptor 2 in complex with hnpsf and gi | yes | membrane protein | 2024-09-05 | 2025-04-09 | electron microscopy | 3.21 | N.A. | N.A. | 40128413 | 10.1038/s44319-025-00428-2 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAHHHHHHHH | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLE | N.A. | 17.4126 | 0 | 259 | 0 | 230 | 0 | 246 | 0 | 0 | single-chain antibody fv fragment (scfv16) | N.A. | mus musculus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 29;25 | 16;9 | 0.89;0.75 | H_only | train |
9jg0_K | 9jg0 | cryo-em structure of neuropeptide ff receptor 2 in the ligand-free state with bril fusion, anti-bril fab, and nanobody | no | membrane protein | 2024-09-05 | 2025-04-09 | electron microscopy | 2.91 | N.A. | N.A. | 40128413 | 10.1038/s44319-025-00428-2 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | K | N.A. | GSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSSLEHHHHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS | N.A. | 13.653547 | 0 | 131 | 0 | 120 | 0 | 120 | 0 | 0 | anti-fab nanobody | N.A. | synthetic construct | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9jg0_H_L | 9jg0 | cryo-em structure of neuropeptide ff receptor 2 in the ligand-free state with bril fusion, anti-bril fab, and nanobody | no | membrane protein | 2024-09-05 | 2025-04-09 | electron microscopy | 2.91 | N.A. | N.A. | 40128413 | 10.1038/s44319-025-00428-2 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | EVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.907553 | 22.592756 | 229 | 215 | 218 | 212 | 225 | 212 | 99 | anti-bril fab heavy chain | anti-bril fab light chain | homo sapiens | homo sapiens | R | protein | isoform 2 of neuropeptide ff receptor 2,soluble cytochrome b562 | homo sapiens | 40 | 17 | 0.81 | HL | train |
9jfu_K | 9jfu | cryo-em structure of inactive gpr4 with ne52-qq57 | yes | signaling protein/immune system | 2024-09-05 | 2025-04-23 | electron microscopy | 3.23 | N.A. | N.A. | 40211064 | 10.1038/s41422-025-01092-w | 0 | auth_asym_id | VHH | IGHV3 | N.A. | K | N.A. | GSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS | N.A. | 13.99586 | 0 | 123 | 0 | 120 | 0 | 120 | 0 | 0 | anti-fab nanobody | N.A. | homo sapiens | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9jfu_H_L | 9jfu | cryo-em structure of inactive gpr4 with ne52-qq57 | yes | signaling protein/immune system | 2024-09-05 | 2025-04-23 | electron microscopy | 3.23 | N.A. | N.A. | 40211064 | 10.1038/s41422-025-01092-w | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSMKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFT... | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | EVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 24.57647 | 23.466194 | 611 | 214 | 225 | 212 | 225 | 212 | 97 | mbp-anti-bril fab heavy chain | anti-bril fab light chain | homo sapiens | homo sapiens | R | protein | g-protein coupled receptor 4,soluble cytochrome b562 | homo sapiens | 33 | 15 | 0.83 | HL | train |
9jfw_N | 9jfw | cryo-em structure of gpr4 complexed with gs in ph6.8 | yes | signaling protein/immune system | 2024-09-05 | 2025-04-23 | electron microscopy | 3.13 | N.A. | N.A. | 40211064 | 10.1038/s41422-025-01092-w | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAMQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | 13.584998 | 0 | 157 | 0 | 126 | 0 | 126 | 0 | 0 | nanobody 35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 46;33 | 13;12 | 0.57;0.71 | H_only | train |
9jfx_N | 9jfx | cryo-em structure of gpr4 complexed with minigs/q in ph7.5 | yes | signaling protein/immune system | 2024-09-05 | 2025-04-23 | electron microscopy | 2.87 | N.A. | N.A. | 40211064 | 10.1038/s41422-025-01092-w | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAMQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | 13.983079 | 0 | 157 | 0 | 126 | 0 | 126 | 0 | 0 | nanobody 35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 41;29 | 13;11 | 0.62;0.79 | H_only | train |
9jft_N | 9jft | cryo-em structure of gpr65 complexed with minigs in ph6.5 | no | signaling protein/immune system | 2024-09-05 | 2025-08-13 | electron microscopy | 3.27 | N.A. | N.A. | 40211064 | 10.1038/s41422-025-01092-w | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAMQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.808627 | 0 | 157 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody 35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 49;32 | 16;12 | 0.62;0.71 | H_only | train |
9jg1_L_H | 9jg1 | cryo-em structure of adriforant-bound histamine receptor 4 h4r at inactive state | no | membrane protein/immune system | 2024-09-05 | 2025-12-03 | electron microscopy | 3.62 | N.A. | N.A. | 40877594 | 10.1038/s41401-025-01633-4 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | L | H | MSEVQLVESGGGLVQPGGSLRLSCAASGFNVVVFSIHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | MSDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGGHHHHHH | VQLVESGGGLVQPGGSLRLSCAASGFNVVVFSIHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTV | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKV | 14.015872 | 13.287964 | 226 | 222 | 121 | 106 | 121 | 106 | 50 | anti-bril fab light chain | anti-bril fab heavy chain | homo sapiens | homo sapiens | R | protein | histamine h4 receptor,soluble cytochrome b562 | homo sapiens | 47 | 18 | 0.75 | HL | train |
9dim_E_F | 9dim | q23.md39 in complex with fab from antibody 35o22 | yes | viral protein/immune system | 2024-09-05 | 2025-12-17 | electron microscopy | 3.19 | N.A. | N.A. | 41332666 | 10.1101/2024.10.04.616739 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | E | F | QGQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGLEVLFQ | QSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQSKANPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | GQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSS | SVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLG | 14.685273 | 13.350807 | 243 | 216 | 130 | 110 | 130 | 110 | 41 | 35o22 fab heavy chain | 35o22 fab light chain | homo sapiens | homo sapiens | B | protein | q23.md39 transmembrane protein gp41 | human immunodeficiency virus 1 | 26 | 10 | 0.77 | HL | train |
9dim_M_N | 9dim | q23.md39 in complex with fab from antibody 35o22 | yes | viral protein/immune system | 2024-09-05 | 2025-12-17 | electron microscopy | 3.19 | N.A. | N.A. | 41332666 | 10.1101/2024.10.04.616739 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | M | N | QGQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGLEVLFQ | QSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQSKANPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | GQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSS | SVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLG | 14.695194 | 13.354203 | 243 | 216 | 130 | 110 | 130 | 110 | 42 | 35o22 fab heavy chain | 35o22 fab light chain | homo sapiens | homo sapiens | D | protein | q23.md39 transmembrane protein gp41 | human immunodeficiency virus 1 | 23 | 9 | 0.75 | HL | train |
9gp2_H_L | 9gp2 | apoj22.9 unliganded structure of an fab fragment from the therapeutic antibody j22.9-xi | no | antitumor protein | 2024-09-06 | 2024-09-25 | x-ray diffraction | 1.97 | 0.202 | 0.162 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | H | L | QVQLQQSGGGLVQPGGSLKLSCAASGIDFSRYWMSWVRRAPGKGLEWIGEINPDSSTINYAPSLKDKFIISRDNAKNTLYLQMSKVRSEDTALYYCASLYYDYGDAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | DIVMTQSQRFMTTSVGDRVSVTCKASQSVDSNVAWYQQKPRQSPKALIFSASLRFSGVPARFTGSGSGTDFTLTISNLQSEDLAEYFCQQYNNYPLTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | QVQLQQSGGGLVQPGGSLKLSCAASGIDFSRYWMSWVRRAPGKGLEWIGEINPDSSTINYAPSLKDKFIISRDNAKNTLYLQMSKVRSEDTALYYCASLYYDYGDAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | DIVMTQSQRFMTTSVGDRVSVTCKASQSVDSNVAWYQQKPRQSPKALIFSASLRFSGVPARFTGSGSGTDFTLTISNLQSEDLAEYFCQQYNNYPLTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.39004 | 22.793468 | 222 | 213 | 222 | 213 | 222 | 213 | 96 | chains: h | chains: l | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9gox_H_L | 9gox | crystal structure of fab b6-d9 in complex with cd38 | no | immune system | 2024-09-06 | 2025-02-12 | x-ray diffraction | 1.84 | 0.208 | 0.174 | 39882744 | 10.1080/19420862.2025.2457471 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | H | L | QVQLVQSGAEVKKPGSSVKVSCKASGGFFSHYIINWVRQAPGQGLEWMGRVIPVIDDAYYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARSRGYYGSFYFDIWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGSSVKVSCKASGGFFSHYIINWVRQAPGQGLEWMGRVIPVIDDAYYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARSRGYYGSFYFDIWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.763475 | 22.849213 | 224 | 214 | 223 | 214 | 223 | 214 | 103 | fab b6-d9 heavy chain | fab b6-d9 light chain | homo sapiens | homo sapiens | A | protein | adp-ribosyl cyclase/cyclic adp-ribose hydrolase 1 | homo sapiens | 36 | 16 | 0.8 | HL | train |
9goy_H_L | 9goy | crystal structure of fab e2-reca in complex with cd38 | yes | immune system | 2024-09-06 | 2025-02-12 | x-ray diffraction | 2.7 | 0.279 | 0.243 | 39882744 | 10.1080/19420862.2025.2457471 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | H | L | QVQLVQSGAEVKKPGSSVKVSCKASGLPDATYAIGWVRQAPGQGLEWMGRIIPRLDAEHYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARGLGYYLYSSYYFDIWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGSSVKVSCKASGLPDATYAIGWVRQAPGQGLEWMGRIIPRLDAEHYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARGLGYYLYSSYYFDIWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 21.083975 | 23.427015 | 226 | 214 | 224 | 212 | 224 | 212 | 102 | fab e2-reca heavy chain | fab e2-reca light chain | homo sapiens | homo sapiens | A | protein | adp-ribosyl cyclase/cyclic adp-ribose hydrolase 1 | homo sapiens | 38 | 18 | 0.86 | HL | train |
9jh3_S | 9jh3 | cmf-019 with aplnr-gi complex | no | membrane protein/immune system | 2024-09-08 | 2025-04-23 | electron microscopy | 2.93 | N.A. | N.A. | 40314976 | 10.1073/pnas.2423432122 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAA | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.697493 | 0 | 250 | 0 | 232 | 0 | 246 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 31;20 | 17;8 | 0.89;0.8 | H_only | train |
9jhj_E | 9jhj | cryo-em structure of the c18:0 ceramide-bound fpr2-gi complex | no | membrane protein | 2024-09-09 | 2025-03-19 | electron microscopy | 3.2 | N.A. | N.A. | 40080544 | 10.1126/science.ado4188 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.33646 | 0 | 285 | 0 | 211 | 0 | 247 | 0 | 0 | scfv16 | N.A. | homo sapiens | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 31;19 | 19;8 | 0.95;0.89 | H_only | train |
9jh5_N | 9jh5 | activation mechanism of cysltr2 by c16:0 ceramide | no | membrane protein | 2024-09-09 | 2025-04-23 | electron microscopy | 2.76 | N.A. | N.A. | 40049228 | 10.1038/s41586-025-08792-8 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAMQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.684873 | 0 | 151 | 0 | 128 | 0 | 128 | 0 | 0 | nb35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 48;31 | 15;11 | 0.58;0.73 | H_only | train |
9jh5_S | 9jh5 | activation mechanism of cysltr2 by c16:0 ceramide | no | membrane protein | 2024-09-09 | 2025-04-23 | electron microscopy | 2.76 | N.A. | N.A. | 40049228 | 10.1038/s41586-025-08792-8 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKGS | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.356945 | 0 | 250 | 0 | 233 | 0 | 246 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 34;20 | 20;8 | 0.91;0.8 | H_only | train |
9jhp_S | 9jhp | cryo-em structure of gpr4 complexed with minig13 in ph6.8 | yes | signaling protein/immune system | 2024-09-10 | 2025-04-23 | electron microscopy | 3.35 | N.A. | N.A. | 40211064 | 10.1038/s41422-025-01092-w | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | MVSAIVLYVLLAAAAHSAFADVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAENLYFQSHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.959482 | 0 | 286 | 0 | 230 | 0 | 246 | 0 | 0 | scfv16 | N.A. | homo sapiens | N.A. | A;B | protein;protein | guanine nucleotide-binding protein subunit alpha-13;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 30;19 | 19;7 | 0.95;0.78 | H_only | train |
9dl0_A_Y | 9dl0 | crystal structure of a synthetic fab (r3h8) in complex with the frb domain of mtor | no | immune system/transferase | 2024-09-10 | 2025-06-11 | x-ray diffraction | 2 | 0.234 | 0.205 | 40489625 | 10.1073/pnas.2424679122 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | A | Y | EVQLVESGGGLVQPGGSLRLSCAASGFNFSSSYIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFSYMSGSVFWALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSWFPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | EVQLVESGGGLVQPGGSLRLSCAASGFNFSSSYIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFSYMSGSVFWALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSWFPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 21.024218 | 23.227564 | 224 | 212 | 218 | 212 | 224 | 212 | 98 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | G | protein | serine/threonine-protein kinase mtor | homo sapiens | 49 | 24 | 0.86 | HL | train |
9dl0_H_Z | 9dl0 | crystal structure of a synthetic fab (r3h8) in complex with the frb domain of mtor | no | immune system/transferase | 2024-09-10 | 2025-06-11 | x-ray diffraction | 2 | 0.234 | 0.205 | 40489625 | 10.1073/pnas.2424679122 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | Z | EVQLVESGGGLVQPGGSLRLSCAASGFNFSSSYIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFSYMSGSVFWALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSWFPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | EVQLVESGGGLVQPGGSLRLSCAASGFNFSSSYIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFSYMSGSVFWALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSWFPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 21.534485 | 23.415993 | 224 | 212 | 224 | 212 | 224 | 212 | 103 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | I | protein | serine/threonine-protein kinase mtor | homo sapiens | 49 | 24 | 0.89 | HL | train |
9dlf_B_A | 9dlf | arabinosyltransferase aftb in complex with fab_b3 | no | membrane protein | 2024-09-10 | 2025-06-25 | electron microscopy | 2.85 | N.A. | N.A. | 40301322 | 10.1038/s41467-025-57843-1 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | B | A | EVQLVESGGGLVQPGGSLRLSCAASGFNVSSSYIHWVRQAPGKGLEWVASISSYYGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGYMYSHWVYSYGAIDYWGQGTLVTVSSA | DIQMTQSPSSLSASVGDRVTITCRASQSVSSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSPPYGPITFGQGTKVELK | EVQLVESGGGLVQPGGSLRLSCAASGFNVSSSYIHWVRQAPGKGLEWVASISSYYGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGYMYSHWVYSYGAIDYWGQGTLVTVSSA | DIQMTQSPSSLSASVGDRVTITCRASQSVSSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSPPYGPITFGQGTKVELK | 14.878225 | 13.69684 | 126 | 109 | 126 | 109 | 126 | 109 | 44 | fab_b3 heavy chain | fab_b3 light chain | homo sapiens | homo sapiens | C | protein | arabinosyltransferase aftb | mycolicibacterium chubuense | 60 | 19 | 0.73 | HL | train |
9dm0_C_D | 9dm0 | cryo-em structure of the sfv009 3g01 fab in complex with a/california/04/2009 | no | immune system | 2024-09-11 | 2025-02-19 | electron microscopy | 2.9 | N.A. | N.A. | 39894881 | 10.1038/s41467-025-56496-4 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | C | D | QVQLVESGGGVVQPGRSLRLSCAASGFTFRIYAMHWVRQAPGKGLEWVAVISNEGTNKYYADSVKGRFTISRDNSKNTLYLQMNSLRPEDAAVYYCARDPSNPPHWGNFDSWGQGTLVTVSS | EIVLTQSPGTLSLSPGERATLSCRASESVSTYLAWYQKKPGQAPRLLIYDASHRATGIPARFSGSGSGTDFTLTISSLESEDFGVYYCQQRSNWPPITFGQGTRLEIK | QVQLVESGGGVVQPGRSLRLSCAASGFTFRIYAMHWVRQAPGKGLEWVAVISNEGTNKYYADSVKGRFTISRDNSKNTLYLQMNSLRPEDAAVYYCARDPSNPPHWGNFDSWGQGTLVTVSS | EIVLTQSPGTLSLSPGERATLSCRASESVSTYLAWYQKKPGQAPRLLIYDASHRATGIPARFSGSGSGTDFTLTISSLESEDFGVYYCQQRSNWPPITFGQGTRLEIK | 13.887713 | 13.310804 | 122 | 108 | 122 | 108 | 122 | 108 | 41 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | B | protein | hemagglutinin | influenza a virus (a/california/04/2009(h1n1)) | 40 | 18 | 0.9 | HL | train |
9jie_H_L | 9jie | rat hepatitis e virus capsid protein e2s domain in complex with fab c6 | no | viral protein/immune system | 2024-09-11 | 2025-07-23 | electron microscopy | 2.76 | N.A. | N.A. | 40571163 | 10.1016/j.jhep.2025.06.015 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV1 | H | L | QVQLVESGGGVVQPGRSLRLSCAASGFTFRSYAIHWVRQAPGKGLEWVALISYDGSNGYYADSVKGRFTISRDNSKNTVYLQVNTLRAEDTALYYCARDRGSIVEPAALYIDYWGQGTLVTVSS | QSVLTQPPSVSAAPGQMVTISCSGSSSNIGNNYVSWYQHLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSVTLGITGLQTGDEADYYCGTWDSSLSAVVFGGGTKLTVL | QVQLVESGGGVVQPGRSLRLSCAASGFTFRSYAIHWVRQAPGKGLEWVALISYDGSNGYYADSVKGRFTISRDNSKNTVYLQVNTLRAEDTALYYCARDRGSIVEPAALYIDYWGQGTLVTVSS | QSVLTQPPSVSAAPGQMVTISCSGSSSNIGNNYVSWYQHLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSVTLGITGLQTGDEADYYCGTWDSSLSAVVFGGGTKLTVL | 14.07435 | 13.345296 | 124 | 110 | 124 | 110 | 124 | 110 | 55 | c6 fab heavy chain | c6 fab light chain | homo sapiens | homo sapiens | A | protein | pro-secreted protein orf2 | rocahepevirus ratti | 33 | 14 | 0.88 | HL | train |
9jie_C_D | 9jie | rat hepatitis e virus capsid protein e2s domain in complex with fab c6 | no | viral protein/immune system | 2024-09-11 | 2025-07-23 | electron microscopy | 2.76 | N.A. | N.A. | 40571163 | 10.1016/j.jhep.2025.06.015 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV1 | C | D | QVQLVESGGGVVQPGRSLRLSCAASGFTFRSYAIHWVRQAPGKGLEWVALISYDGSNGYYADSVKGRFTISRDNSKNTVYLQVNTLRAEDTALYYCARDRGSIVEPAALYIDYWGQGTLVTVSS | QSVLTQPPSVSAAPGQMVTISCSGSSSNIGNNYVSWYQHLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSVTLGITGLQTGDEADYYCGTWDSSLSAVVFGGGTKLTVL | QVQLVESGGGVVQPGRSLRLSCAASGFTFRSYAIHWVRQAPGKGLEWVALISYDGSNGYYADSVKGRFTISRDNSKNTVYLQVNTLRAEDTALYYCARDRGSIVEPAALYIDYWGQGTLVTVSS | QSVLTQPPSVSAAPGQMVTISCSGSSSNIGNNYVSWYQHLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSVTLGITGLQTGDEADYYCGTWDSSLSAVVFGGGTKLTVL | 14.065991 | 13.342629 | 124 | 110 | 124 | 110 | 124 | 110 | 52 | c6 fab heavy chain | c6 fab light chain | homo sapiens | homo sapiens | B | protein | pro-secreted protein orf2 | rocahepevirus ratti | 33 | 14 | 0.88 | HL | train |
9jig_H_L | 9jig | hepatitis e virus capsid protein e2s domain (genotype iv) in complex with fab c6 | no | viral protein/immune system | 2024-09-11 | 2025-07-23 | electron microscopy | 2.38 | N.A. | N.A. | 40571163 | 10.1016/j.jhep.2025.06.015 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV1 | H | L | QVQLVESGGGVVQPGRSLRLSCAASGFTFRSYAIHWVRQAPGKGLEWVALISYDGSNGYYADSVKGRFTISRDNSKNTVYLQVNTLRAEDTALYYCARDRGSIVEPAALYIDYWGQGTLVTVSS | QSVLTQPPSVSAAPGQMVTISCSGSSSNIGNNYVSWYQHLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSVTLGITGLQTGDEADYYCGTWDSSLSAVVFGGGTKLTVL | QVQLVESGGGVVQPGRSLRLSCAASGFTFRSYAIHWVRQAPGKGLEWVALISYDGSNGYYADSVKGRFTISRDNSKNTVYLQVNTLRAEDTALYYCARDRGSIVEPAALYIDYWGQGTLVTVSS | QSVLTQPPSVSAAPGQMVTISCSGSSSNIGNNYVSWYQHLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSVTLGITGLQTGDEADYYCGTWDSSLSAVVFGGGTKLTVL | 14.135313 | 13.362575 | 124 | 110 | 124 | 110 | 124 | 110 | 53 | c6 fab heavy chain | c6 fab light chain | homo sapiens | homo sapiens | A | protein | pro-secreted protein orf2 | hepatitis e virus | 37 | 16 | 0.94 | HL | train |
9jig_E_F | 9jig | hepatitis e virus capsid protein e2s domain (genotype iv) in complex with fab c6 | no | viral protein/immune system | 2024-09-11 | 2025-07-23 | electron microscopy | 2.38 | N.A. | N.A. | 40571163 | 10.1016/j.jhep.2025.06.015 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV1 | E | F | QVQLVESGGGVVQPGRSLRLSCAASGFTFRSYAIHWVRQAPGKGLEWVALISYDGSNGYYADSVKGRFTISRDNSKNTVYLQVNTLRAEDTALYYCARDRGSIVEPAALYIDYWGQGTLVTVSS | QSVLTQPPSVSAAPGQMVTISCSGSSSNIGNNYVSWYQHLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSVTLGITGLQTGDEADYYCGTWDSSLSAVVFGGGTKLTVL | QVQLVESGGGVVQPGRSLRLSCAASGFTFRSYAIHWVRQAPGKGLEWVALISYDGSNGYYADSVKGRFTISRDNSKNTVYLQVNTLRAEDTALYYCARDRGSIVEPAALYIDYWGQGTLVTVSS | QSVLTQPPSVSAAPGQMVTISCSGSSSNIGNNYVSWYQHLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSVTLGITGLQTGDEADYYCGTWDSSLSAVVFGGGTKLTVL | 14.118008 | 13.353675 | 124 | 110 | 124 | 110 | 124 | 110 | 54 | c6 fab heavy chain | c6 fab light chain | homo sapiens | homo sapiens | B | protein | pro-secreted protein orf2 | hepatitis e virus | 38 | 17 | 0.94 | HL | train |
9jii_H_L | 9jii | rat hepatitis e virus capsid protein e2s domain in complex with fab c158 | no | viral protein/immune system | 2024-09-11 | 2025-07-23 | electron microscopy | 2.54 | N.A. | N.A. | 40571163 | 10.1016/j.jhep.2025.06.015 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV1 | H | L | QVQIVQSGAEVKKPGASVKVSCTASGYTFTRYGLVWVRQAPGQGLEWMGSINTGNANTIYSEKFQGRVSITRDTSASTTYMELRSLRYEDTAVYFCARERGGSVVEPAAHYMDVWGNGTTVSVTS | QSVLTQPPSVSAAPGQKVTISCSGHSSNIANNYVAWYQQLPGTAPKLLIYDNDKRPSGIPDRFSASKSGTSATLGITGLQTGDEAHYYCETWDSSLSLWVFGGGTMVTVL | QVQIVQSGAEVKKPGASVKVSCTASGYTFTRYGLVWVRQAPGQGLEWMGSINTGNANTIYSEKFQGRVSITRDTSASTTYMELRSLRYEDTAVYFCARERGGSVVEPAAHYMDVWGNGTTVSVTS | QSVLTQPPSVSAAPGQKVTISCSGHSSNIANNYVAWYQQLPGTAPKLLIYDNDKRPSGIPDRFSASKSGTSATLGITGLQTGDEAHYYCETWDSSLSLWVFGGGTMVTVL | 14.290375 | 13.425042 | 125 | 110 | 125 | 110 | 125 | 110 | 53 | c158 fab heavy chain | c158 fab light chain | homo sapiens | homo sapiens | A | protein | pro-secreted protein orf2 | rocahepevirus ratti | 38 | 19 | 0.95 | HL | train |
9jii_F_E | 9jii | rat hepatitis e virus capsid protein e2s domain in complex with fab c158 | no | viral protein/immune system | 2024-09-11 | 2025-07-23 | electron microscopy | 2.54 | N.A. | N.A. | 40571163 | 10.1016/j.jhep.2025.06.015 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV1 | F | E | QVQIVQSGAEVKKPGASVKVSCTASGYTFTRYGLVWVRQAPGQGLEWMGSINTGNANTIYSEKFQGRVSITRDTSASTTYMELRSLRYEDTAVYFCARERGGSVVEPAAHYMDVWGNGTTVSVTS | QSVLTQPPSVSAAPGQKVTISCSGHSSNIANNYVAWYQQLPGTAPKLLIYDNDKRPSGIPDRFSASKSGTSATLGITGLQTGDEAHYYCETWDSSLSLWVFGGGTMVTVL | QVQIVQSGAEVKKPGASVKVSCTASGYTFTRYGLVWVRQAPGQGLEWMGSINTGNANTIYSEKFQGRVSITRDTSASTTYMELRSLRYEDTAVYFCARERGGSVVEPAAHYMDVWGNGTTVSVTS | QSVLTQPPSVSAAPGQKVTISCSGHSSNIANNYVAWYQQLPGTAPKLLIYDNDKRPSGIPDRFSASKSGTSATLGITGLQTGDEAHYYCETWDSSLSLWVFGGGTMVTVL | 14.318052 | 13.418277 | 125 | 110 | 125 | 110 | 125 | 110 | 54 | c158 fab heavy chain | c158 fab light chain | homo sapiens | homo sapiens | B | protein | pro-secreted protein orf2 | rocahepevirus ratti | 37 | 18 | 0.95 | HL | train |
9jij_H_L | 9jij | hepatitis e virus capsid protein e2s domain (genotype i) in complex with fab c158 | no | viral protein/immune system | 2024-09-11 | 2025-07-23 | electron microscopy | 2.64 | N.A. | N.A. | 40571163 | 10.1016/j.jhep.2025.06.015 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV1 | H | L | QVQIVQSGAEVKKPGASVKVSCTASGYTFTRYGLVWVRQAPGQGLEWMGSINTGNANTIYSEKFQGRVSITRDTSASTTYMELRSLRYEDTAVYFCARERGGSVVEPAAHYMDVWGNGTTVSVTS | QSVLTQPPSVSAAPGQKVTISCSGHSSNIANNYVAWYQQLPGTAPKLLIYDNDKRPSGIPDRFSASKSGTSATLGITGLQTGDEAHYYCETWDSSLSLWVFGGGTMVTVL | QVQIVQSGAEVKKPGASVKVSCTASGYTFTRYGLVWVRQAPGQGLEWMGSINTGNANTIYSEKFQGRVSITRDTSASTTYMELRSLRYEDTAVYFCARERGGSVVEPAAHYMDVWGNGTTVSVTS | QSVLTQPPSVSAAPGQKVTISCSGHSSNIANNYVAWYQQLPGTAPKLLIYDNDKRPSGIPDRFSASKSGTSATLGITGLQTGDEAHYYCETWDSSLSLWVFGGGTMVTVL | 14.243169 | 13.438173 | 125 | 110 | 125 | 110 | 125 | 110 | 51 | c158 fab heavy chain | c158 fab light chain | homo sapiens | homo sapiens | A | protein | secreted protein orf2 | hepatitis e virus genotype 1 (isolate human/burma) | 42 | 19 | 0.95 | HL | train |
9jij_E_F | 9jij | hepatitis e virus capsid protein e2s domain (genotype i) in complex with fab c158 | no | viral protein/immune system | 2024-09-11 | 2025-07-23 | electron microscopy | 2.64 | N.A. | N.A. | 40571163 | 10.1016/j.jhep.2025.06.015 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV1 | E | F | QVQIVQSGAEVKKPGASVKVSCTASGYTFTRYGLVWVRQAPGQGLEWMGSINTGNANTIYSEKFQGRVSITRDTSASTTYMELRSLRYEDTAVYFCARERGGSVVEPAAHYMDVWGNGTTVSVTS | QSVLTQPPSVSAAPGQKVTISCSGHSSNIANNYVAWYQQLPGTAPKLLIYDNDKRPSGIPDRFSASKSGTSATLGITGLQTGDEAHYYCETWDSSLSLWVFGGGTMVTVL | QVQIVQSGAEVKKPGASVKVSCTASGYTFTRYGLVWVRQAPGQGLEWMGSINTGNANTIYSEKFQGRVSITRDTSASTTYMELRSLRYEDTAVYFCARERGGSVVEPAAHYMDVWGNGTTVSVTS | QSVLTQPPSVSAAPGQKVTISCSGHSSNIANNYVAWYQQLPGTAPKLLIYDNDKRPSGIPDRFSASKSGTSATLGITGLQTGDEAHYYCETWDSSLSLWVFGGGTMVTVL | 14.236214 | 13.42638 | 125 | 110 | 125 | 110 | 125 | 110 | 51 | c158 fab heavy chain | c158 fab light chain | homo sapiens | homo sapiens | B | protein | secreted protein orf2 | hepatitis e virus genotype 1 (isolate human/burma) | 42 | 19 | 0.95 | HL | train |
9jic_S | 9jic | cryo-em structure of the apo hcar3-gi complex | yes | membrane protein/immune system | 2024-09-11 | 2025-12-17 | electron microscopy | 3.4 | N.A. | N.A. | 39427321 | 10.1016/j.celrep.2024.114895 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 16.602793 | 0 | 233 | 0 | 199 | 0 | 233 | 0 | 0 | scfv16 | N.A. | homo sapiens | N.A. | B;C | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1 | homo sapiens;homo sapiens | 22;33 | 7;12 | 0.64;0.57 | H_only | train |
9jid_S | 9jid | cryo-em structure of the niacin-hcar3-gi complex | yes | membrane protein/immune system | 2024-09-11 | 2025-12-17 | electron microscopy | 2.78 | N.A. | N.A. | 39427321 | 10.1016/j.celrep.2024.114895 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.653175 | 0 | 233 | 0 | 233 | 0 | 233 | 0 | 0 | scfv16 | N.A. | homo sapiens | N.A. | B;C | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1 | homo sapiens;homo sapiens | 25;28 | 10;17 | 0.77;0.94 | H_only | train |
9jik_H_L | 9jik | rat hepatitis e virus capsid protein e2s domain in complex with fab c127 | no | viral protein/immune system | 2024-09-12 | 2025-07-23 | electron microscopy | 2.91 | N.A. | N.A. | 40571163 | 10.1016/j.jhep.2025.06.015 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV1 | H | L | QVQLVQSGTELKKPGASVTVSCQASGYTFTRYGVSWMRQAPGQGLEWMGWISVHNGHTTYSQSVQGRVTVTTDTSTNTAYMTLRGLRTDDTAVYYCARYRGSTVVPAAIVFDFWGQGTLVTVSS | QFVLTQPPSVSAAPGQRVTISCSGSNSNIGHNYVCWYHHLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLAITGLQTGDEADYFCETWDSSLSAVVFGGGTKVTVL | QVQLVQSGTELKKPGASVTVSCQASGYTFTRYGVSWMRQAPGQGLEWMGWISVHNGHTTYSQSVQGRVTVTTDTSTNTAYMTLRGLRTDDTAVYYCARYRGSTVVPAAIVFDFWGQGTLVTVSS | VLTQPPSVSAAPGQRVTISCSGSNSNIGHNYVCWYHHLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLAITGLQTGDEADYFCETWDSSLSAVVFGGGTKVTVL | 14.172758 | 13.316097 | 124 | 110 | 124 | 108 | 124 | 108 | 47 | c127 fab heavy chain | c127 fab light chain | homo sapiens | homo sapiens | A | protein | pro-secreted protein orf2 | rocahepevirus ratti | 36 | 16 | 0.89 | HL | train |
9jik_C_D | 9jik | rat hepatitis e virus capsid protein e2s domain in complex with fab c127 | no | viral protein/immune system | 2024-09-12 | 2025-07-23 | electron microscopy | 2.91 | N.A. | N.A. | 40571163 | 10.1016/j.jhep.2025.06.015 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV1 | C | D | QVQLVQSGTELKKPGASVTVSCQASGYTFTRYGVSWMRQAPGQGLEWMGWISVHNGHTTYSQSVQGRVTVTTDTSTNTAYMTLRGLRTDDTAVYYCARYRGSTVVPAAIVFDFWGQGTLVTVSS | QFVLTQPPSVSAAPGQRVTISCSGSNSNIGHNYVCWYHHLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLAITGLQTGDEADYFCETWDSSLSAVVFGGGTKVTVL | QVQLVQSGTELKKPGASVTVSCQASGYTFTRYGVSWMRQAPGQGLEWMGWISVHNGHTTYSQSVQGRVTVTTDTSTNTAYMTLRGLRTDDTAVYYCARYRGSTVVPAAIVFDFWGQGTLVTVSS | VLTQPPSVSAAPGQRVTISCSGSNSNIGHNYVCWYHHLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLAITGLQTGDEADYFCETWDSSLSAVVFGGGTKVTVL | 14.17329 | 13.316116 | 124 | 110 | 124 | 108 | 124 | 108 | 46 | c127 fab heavy chain | c127 fab light chain | homo sapiens | homo sapiens | B | protein | pro-secreted protein orf2 | rocahepevirus ratti | 36 | 16 | 0.89 | HL | train |
9jim_H_L | 9jim | rat hepatitis e virus capsid protein e2s domain in complex with fab c145 | no | viral protein/immune system | 2024-09-12 | 2025-07-23 | electron microscopy | 2.86 | N.A. | N.A. | 40571163 | 10.1016/j.jhep.2025.06.015 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV1 | H | L | QVQLVQSGAEVKKPGASVKVSCETSGYTFTSYNINWVRQATGQGLEWMGWMNPTDGNTDYAQKFQGRVSMTRDTSISTAYMELSSLRSEDTAVYYCARGRGTTRFSLQNFPFDNAYYMDVWGKGTTVTVSS | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSPVVFGGGTRLTVL | QVQLVQSGAEVKKPGASVKVSCETSGYTFTSYNINWVRQATGQGLEWMGWMNPTDGNTDYAQKFQGRVSMTRDTSISTAYMELSSLRSEDTAVYYCARGRGTTRFSLQNFPFDNAYYMDVWGKGTTVTVS | VLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSPVVFGGGTRLTVL | 14.747076 | 13.237796 | 131 | 110 | 130 | 108 | 130 | 108 | 56 | c145 fab heavy chain | c145 fab light chain | homo sapiens | homo sapiens | A | protein | pro-secreted protein orf2 | rocahepevirus ratti | 34 | 16 | 0.94 | HL | train |
9jim_C_D | 9jim | rat hepatitis e virus capsid protein e2s domain in complex with fab c145 | no | viral protein/immune system | 2024-09-12 | 2025-07-23 | electron microscopy | 2.86 | N.A. | N.A. | 40571163 | 10.1016/j.jhep.2025.06.015 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV1 | C | D | QVQLVQSGAEVKKPGASVKVSCETSGYTFTSYNINWVRQATGQGLEWMGWMNPTDGNTDYAQKFQGRVSMTRDTSISTAYMELSSLRSEDTAVYYCARGRGTTRFSLQNFPFDNAYYMDVWGKGTTVTVSS | QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSPVVFGGGTRLTVL | QVQLVQSGAEVKKPGASVKVSCETSGYTFTSYNINWVRQATGQGLEWMGWMNPTDGNTDYAQKFQGRVSMTRDTSISTAYMELSSLRSEDTAVYYCARGRGTTRFSLQNFPFDNAYYMDVWGKGTTVTVS | VLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSPVVFGGGTRLTVL | 14.747954 | 13.237413 | 131 | 110 | 130 | 108 | 130 | 108 | 57 | c145 fab heavy chain | c145 fab light chain | homo sapiens | homo sapiens | B | protein | pro-secreted protein orf2 | rocahepevirus ratti | 34 | 16 | 0.94 | HL | train |
9jin_C_D | 9jin | rat hepatitis e virus capsid protein e2s domain in complex with fab h4 | no | viral protein/immune system | 2024-09-12 | 2025-07-23 | electron microscopy | 2.56 | N.A. | N.A. | 40571163 | 10.1016/j.jhep.2025.06.015 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | C | D | QVQLVQSGAEVKKPGASVKVACKASGYNFIHYYLHWVRQAPGQGLEWMGIINPSVGRTTYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDVGGMTYCGDECFPPRGWFDPWGQGTLVTV | MPQVPVSLSASVGDRVTITCQASQDIGNYLTWSQQKPGKAPKLLIYDASNLQTGVPSRFSGSGSGTYFTLTISSLQPEDIATYYCQQYDNVPITFGGGTEVEI | QVQLVQSGAEVKKPGASVKVACKASGYNFIHYYLHWVRQAPGQGLEWMGIINPSVGRTTYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDVGGMTYCGDECFPPRGWFDPWGQGTLVTV | MPQVPVSLSASVGDRVTITCQASQDIGNYLTWSQQKPGKAPKLLIYDASNLQTGVPSRFSGSGSGTYFTLTISSLQPEDIATYYCQQYDNVPITFGGGTEVEI | 14.246298 | 12.88616 | 128 | 103 | 128 | 103 | 128 | 103 | 38 | h4 fab heavy chain | h4 fab light chain | homo sapiens | homo sapiens | A;B | protein;protein | pro-secreted protein orf2;pro-secreted protein orf2 | rocahepevirus ratti;rocahepevirus ratti | 22;39 | 9;18 | 1.0;0.82 | HL | train |
9jin_H_L | 9jin | rat hepatitis e virus capsid protein e2s domain in complex with fab h4 | no | viral protein/immune system | 2024-09-12 | 2025-07-23 | electron microscopy | 2.56 | N.A. | N.A. | 40571163 | 10.1016/j.jhep.2025.06.015 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | H | L | QVQLVQSGAEVKKPGASVKVACKASGYNFIHYYLHWVRQAPGQGLEWMGIINPSVGRTTYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDVGGMTYCGDECFPPRGWFDPWGQGTLVTV | MPQVPVSLSASVGDRVTITCQASQDIGNYLTWSQQKPGKAPKLLIYDASNLQTGVPSRFSGSGSGTYFTLTISSLQPEDIATYYCQQYDNVPITFGGGTEVEI | QVQLVQSGAEVKKPGASVKVACKASGYNFIHYYLHWVRQAPGQGLEWMGIINPSVGRTTYAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDVGGMTYCGDECFPPRGWFDPWGQGTLVTV | MPQVPVSLSASVGDRVTITCQASQDIGNYLTWSQQKPGKAPKLLIYDASNLQTGVPSRFSGSGSGTYFTLTISSLQPEDIATYYCQQYDNVPITFGGGTEVEI | 14.244248 | 12.902796 | 128 | 103 | 128 | 103 | 128 | 103 | 38 | h4 fab heavy chain | h4 fab light chain | homo sapiens | homo sapiens | A;B | protein;protein | pro-secreted protein orf2;pro-secreted protein orf2 | rocahepevirus ratti;rocahepevirus ratti | 39;22 | 18;9 | 0.82;1.0 | HL | train |
9dmk_F_G | 9dmk | human muscle nachr with one fab1b-bound | no | membrane protein | 2024-09-13 | 2025-04-09 | electron microscopy | 2.46 | N.A. | N.A. | 40203823 | 10.1016/j.cell.2025.03.004 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV2 | F | G | MDSKGSSQKGSRLLLLLVVSNLLLCQGVVSAQVQLVQSGAEMKKPGSSVKVSCKASGGSFGSYGIDWVRQAPGQGLEWMGGIMPKFDAPKYAEKFQGRLTITADRATNTAYMELSSLRFEDTAIYYCARDEQPFYDSWRGLYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHH | MGWSCIILFLVATATGVHGDIVMTQSPLSLPVTPGEPASISCRSNQSLLHTKGYKYLNWYLQRPGQSPQVLIYFASNRAPGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGLQIPFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEMKKPGSSVKVSCKASGGSFGSYGIDWVRQAPGQGLEWMGGIMPKFDAPKYAEKFQGRLTITADRATNTAYMELSSLRFEDTAIYYCARDEQPFYDSWRGLYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIVMTQSPLSLPVTPGEPASISCRSNQSLLHTKGYKYLNWYLQRPGQSPQVLIYFASNRAPGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGLQIPFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.513052 | 22.586937 | 264 | 238 | 216 | 216 | 222 | 216 | 95 | fab1b heavy chain | fab1b light chain | homo sapiens | homo sapiens | A | protein | acetylcholine receptor subunit alpha | homo sapiens | 50 | 21 | 0.84 | HL | train |
9dml_B_C | 9dml | human muscle nachr with fab2-bound | no | membrane protein | 2024-09-13 | 2025-04-09 | electron microscopy | 2.24 | N.A. | N.A. | 40203823 | 10.1016/j.cell.2025.03.004 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | B | C | MDSKGSSQKGSRLLLLLVVSNLLLCQGVVSAQVQLQESGPGLVKPSETLSLTCTLSDGSISVSTYYWGWVRQSPEKGLEWIASIYYTGDSYYNPSLKSRVTISLDKSKNQFSLRLRSVTAADTAVYFCARDHRRSFWGSGSGYNYRYYFDMWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHH | MGWSCIILFLVATATGVHSDIQMTQSPSLLPASVGERVTITCQASQDINNYLNWYQQKPGKAPKLLIYDASKLETGVPSRFSGSGSGTDFNLTISSLQPEDFATYYCHQYGNLPVHTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLQESGPGLVKPSETLSLTCTLSDGSISVSTYYWGWVRQSPEKGLEWIASIYYTGDSYYNPSLKSRVTISLDKSKNQFSLRLRSVTAADTAVYFCARDHRRSFWGSGSGYNYRYYFDMWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSLLPASVGERVTITCQASQDINNYLNWYQQKPGKAPKLLIYDASKLETGVPSRFSGSGSGTDFNLTISSLQPEDFATYYCHQYGNLPVHTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 23.96477 | 22.814394 | 273 | 234 | 224 | 212 | 230 | 212 | 103 | fab2 heavy chain | fab2 light chain | homo sapiens | homo sapiens | E | protein | acetylcholine receptor subunit alpha | homo sapiens | 65 | 24 | 0.77 | HL | train |
9dml_A_D | 9dml | human muscle nachr with fab2-bound | no | membrane protein | 2024-09-13 | 2025-04-09 | electron microscopy | 2.24 | N.A. | N.A. | 40203823 | 10.1016/j.cell.2025.03.004 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | A | D | MDSKGSSQKGSRLLLLLVVSNLLLCQGVVSAQVQLQESGPGLVKPSETLSLTCTLSDGSISVSTYYWGWVRQSPEKGLEWIASIYYTGDSYYNPSLKSRVTISLDKSKNQFSLRLRSVTAADTAVYFCARDHRRSFWGSGSGYNYRYYFDMWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHH | MGWSCIILFLVATATGVHSDIQMTQSPSLLPASVGERVTITCQASQDINNYLNWYQQKPGKAPKLLIYDASKLETGVPSRFSGSGSGTDFNLTISSLQPEDFATYYCHQYGNLPVHTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLQESGPGLVKPSETLSLTCTLSDGSISVSTYYWGWVRQSPEKGLEWIASIYYTGDSYYNPSLKSRVTISLDKSKNQFSLRLRSVTAADTAVYFCARDHRRSFWGSGSGYNYRYYFDMWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSLLPASVGERVTITCQASQDINNYLNWYQQKPGKAPKLLIYDASKLETGVPSRFSGSGSGTDFNLTISSLQPEDFATYYCHQYGNLPVHTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 23.98961 | 22.805582 | 273 | 234 | 224 | 212 | 230 | 212 | 102 | fab2 heavy chain | fab2 light chain | homo sapiens | homo sapiens | F | protein | acetylcholine receptor subunit alpha | homo sapiens | 65 | 24 | 0.77 | HL | train |
9gry_B | 9gry | cryo-em structure of human slc35b1-q113f variant with amp-pnp | no | transport protein | 2024-09-13 | 2025-05-21 | electron microscopy | 3 | N.A. | N.A. | 40399679 | 10.1038/s41586-025-09069-w | 0 | auth_asym_id | scFv | N.A. | N.A. | B | N.A. | DIVMTQSPASLTVSLGQSVTISCRASENVEYYGTSLMQWYQQKPGQPPKFLIYGASNIESGVPARFSGSGSGTDFSLNIHPVEEDDIAMYFCQQSRKVPYTFGSGTKLEIKGSGKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNA... | N.A. | DIVMTQSPASLTVSLGQSVTISCRASENVEYYGTSLMQWYQQKPGQPPKFLIYGASNIESGVPARFSGSGSGTDFSLNIHPVEEDDIAMYFCQQSRKVPYTFGSGTKLEIKGSGKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNA... | N.A. | 18.321869 | 0 | 612 | 0 | 241 | 0 | 612 | 0 | 0 | maltodextrin-binding protein | N.A. | mus musculus | N.A. | A | protein | human slc35b1-q113f | homo sapiens | 29 | 12 | 0.8 | H_only | train |
9gs3_A | 9gs3 | cryo-em structure of human slc35b1-e33a variant with adp in inward facing conformation | no | transport protein | 2024-09-13 | 2025-05-21 | electron microscopy | 3.15 | N.A. | N.A. | 40399679 | 10.1038/s41586-025-09069-w | 0 | auth_asym_id | scFv | N.A. | N.A. | A | N.A. | DIVMTQSPASLTVSLGQSVTISCRASENVEYYGTSLMQWYQQKPGQPPKFLIYGASNIESGVPARFSGSGSGTDFSLNIHPVEEDDIAMYFCQQSRKVPYTFGSGTKLEIKGSGKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNA... | N.A. | DIVMTQSPASLTVSLGQSVTISCRASENVEYYGTSLMQWYQQKPGQPPKFLIYGASNIESGVPARFSGSGSGTDFSLNIHPVEEDDIAMYFCQQSRKVPYTFGSGTKLEIKGSGKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNA... | N.A. | 18.251646 | 0 | 612 | 0 | 241 | 0 | 612 | 0 | 0 | maltodextrin-binding protein | N.A. | mus musculus | N.A. | B | protein | slc35b1-e33a inward facing conformation | homo sapiens | 28 | 13 | 0.81 | H_only | train |
9gs5_B | 9gs5 | cryo-em structure of human slc35b1-e33a variant with adp in outward facing conformation | yes | transport protein | 2024-09-13 | 2025-05-21 | electron microscopy | 3.1 | N.A. | N.A. | 40399679 | 10.1038/s41586-025-09069-w | 0 | auth_asym_id | scFv | N.A. | N.A. | B | N.A. | DIVMTQSPASLTVSLGQSVTISCRASENVEYYGTSLMQWYQQKPGQPPKFLIYGASNIESGVPARFSGSGSGTDFSLNIHPVEEDDIAMYFCQQSRKVPYTFGSGTKLEIKGSGKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNA... | N.A. | DIVMTQSPASLTVSLGQSVTISCRASENVEYYGTSLMQWYQQKPGQPPKFLIYGASNIESGVPARFSGSGSGTDFSLNIHPVEEDDIAMYFCQQSRKVPYTFGSGTKLEIKGSGKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNA... | N.A. | 18.334425 | 0 | 612 | 0 | 241 | 0 | 612 | 0 | 0 | fv-mbp | N.A. | mus musculus | N.A. | A | protein | solute carrier family 35 member b1 | homo sapiens | 37 | 13 | 0.81 | H_only | train |
9dmf_H_L | 9dmf | crystal structure of ljf-0085 fab, a non-human primate antibody targets hiv-1 envelope protein | no | immune system | 2024-09-13 | 2025-07-23 | x-ray diffraction | 1.48 | 0.2 | 0.188 | 40339576 | 10.1016/j.immuni.2025.04.010 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | H | L | QVQLQESGPGLVKPSETLSLTCTVSGGSIDDYFWNWVRQPPGKPLECIGYIFGRGGGTKYNPSLDNRVTISTDTPNQFSLKLRSVTVADTAIYYCARWNLYDDDFGYNSFAVWGRGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | DIQMTQSPSSLSASVGDTVTITCQARHAVGKNLNWYQQKPGRGPQLLIYMASSRHSGVPSRFRGSGSGREFTLTINNLQPEDFATYSCQQGYTYPWTFGQGTKVEMKGAVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC | QVQLQESGPGLVKPSETLSLTCTVSGGSIDDYFWNWVRQPPGKPLECIGYIFGRGGGTKYNPSLDNRVTISTDTPNQFSLKLRSVTVADTAIYYCARWNLYDDDFGYNSFAVWGRGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | DIQMTQSPSSLSASVGDTVTITCQARHAVGKNLNWYQQKPGRGPQLLIYMASSRHSGVPSRFRGSGSGREFTLTINNLQPEDFATYSCQQGYTYPWTFGQGTKVEMKGAVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC | 23.187374 | 23.079443 | 227 | 214 | 223 | 214 | 227 | 214 | 109 | ljf-0085 fab heavy chain | ljf-0085 fab light chain | macaca mulatta | macaca mulatta | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9dmq_F_G | 9dmq | human muscle nachr with fab3-bound | no | membrane protein | 2024-09-14 | 2025-04-09 | electron microscopy | 2.06 | N.A. | N.A. | 40203823 | 10.1016/j.cell.2025.03.004 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV3 | F | G | MDSKGSSQKGSRLLLLLVVSNLLLCQGVVSAEVQLVQWGAGLLKPSETLSLTCTVFGGSLRANYWSWIRQAPGKGLEWIGEINHNGHTNYNPSLKSRATISVDTSKNQFSLRLSSVTAADTALYYCARGSRFFYYGAGIYYNARRDRDNYFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHH | MGWSCIILFLVATATGVHSDIVMTQSPGTLSLSPGERATLSCRASQHVTGNCLAWYQQKPDQAPRLLIYDASTRATGVPDRFSGSGSRTDFTLTISRLEPEDFAVYHCQQYGDSPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQWGAGLLKPSETLSLTCTVFGGSLRANYWSWIRQAPGKGLEWIGEINHNGHTNYNPSLKSRATISVDTSKNQFSLRLSSVTAADTALYYCARGSRFFYYGAGIYYNARRDRDNYFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIVMTQSPGTLSLSPGERATLSCRASQHVTGNCLAWYQQKPDQAPRLLIYDASTRATGVPDRFSGSGSRTDFTLTISRLEPEDFAVYHCQQYGDSPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 24.149794 | 23.073137 | 275 | 235 | 227 | 213 | 233 | 213 | 97 | fab3 heavy chain | fab3 light chain | homo sapiens | homo sapiens | D | protein | acetylcholine receptor subunit delta | homo sapiens | 53 | 24 | 0.89 | HL | train |
9dmt_F_G | 9dmt | human muscle nachr with fab7-bound | no | membrane protein | 2024-09-14 | 2025-04-09 | electron microscopy | 2.18 | N.A. | N.A. | 40203823 | 10.1016/j.cell.2025.03.004 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | F | G | MDSKGSSQKGSRLLLLLVVSNLLLCQGVVSAEVQLVESGGGLVKPGGSLRLSCAASGFTFSGYWMHWVRQAPGKGLVWVSHINGDGSSTTYADSVKGRFTISRDNAKNTLYLQMNALRAEDTAVYYCTRDVGSYGLESRYLTYVNWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSDYKDHDGDYKDHDIDYKDDDDKHHHHHHHH | MGWSCIILFLVATATGVHSDIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWFQQKPGQAPKLLIYKASSLESGVPSRFSGSGSGTEFSLTISSLQPDDFATYYCQQYNTYWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVKPGGSLRLSCAASGFTFSGYWMHWVRQAPGKGLVWVSHINGDGSSTTYADSVKGRFTISRDNAKNTLYLQMNALRAEDTAVYYCTRDVGSYGLESRYLTYVNWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | QMTQSPSTLSASVGDRVTITCRASQSISSWLAWFQQKPGQAPKLLIYKASSLESGVPSRFSGSGSGTEFSLTISSLQPDDFATYYCQQYNTYWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 23.367186 | 22.43056 | 295 | 232 | 223 | 208 | 229 | 208 | 86 | fab7 heavy chain | fab7 light chain | homo sapiens | homo sapiens | C;D | protein;protein | acetylcholine receptor subunit alpha;acetylcholine receptor subunit delta | homo sapiens;homo sapiens | 18;37 | 9;19 | 1.0;0.9 | HL | train |
9dmv_F_G | 9dmv | human muscle nachr with fab9-bound | no | membrane protein | 2024-09-14 | 2025-04-09 | electron microscopy | 2.13 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | F | G | MDSKGSSQKGSRLLLLLVVSNLLLCQGVVSAQVQLQESGPRLVKPSQTLSLTCTVSGGSVTRGNYYWTWIRQPAGKELEWIGHIYISGRTNFNPSLKSRVSISVDTSKNQFSLKLTSVTVADTAVYYCAREREVIVDRRRWLDPWGQGILVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHH | MGWSCIILFLVATATGVHSDIVMTQSPSSLSASIGDRVTITCRASHNISRYLSWFQQRPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDYTLTISNLHPEDFATYFCQQSYSTPLIFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPRLVKPSQTLSLTCTVSGGSVTRGNYYWTWIRQPAGKELEWIGHIYISGRTNFNPSLKSRVSISVDTSKNQFSLKLTSVTVADTAVYYCAREREVIVDRRRWLDPWGQGILVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | IVMTQSPSSLSASIGDRVTITCRASHNISRYLSWFQQRPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDYTLTISNLHPEDFATYFCQQSYSTPLIFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 23.16845 | 22.634495 | 266 | 233 | 218 | 210 | 224 | 210 | 97 | fab9 heavy chain | fab9 light chain | homo sapiens | homo sapiens | E | protein | acetylcholine receptor subunit beta | homo sapiens | 48 | 19 | 0.83 | HL | train |
9dn4_A_B | 9dn4 | crystal structure of a sars-cov-2 20-mer rna in complex with fab bl3-6s97n | no | immune system | 2024-09-16 | 2024-09-25 | x-ray diffraction | 1.9 | 0.223 | 0.176 | 40557870 | 10.1093/nar/gkaf559 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | A | B | MGWSCIILFLVATATGVHSEVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCHHHHHH | MGWSCIILFLVATATGVHSDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPNTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPNTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 20.769703 | 23.0979 | 250 | 233 | 215 | 212 | 222 | 212 | 98 | fab bl3-6s97n heavy chain | fab bl3-6s97n light chain | mus musculus | mus musculus | E | RNA | rna (5'-r(p*cp*up*cp*gp*up*cp*up*gp*ap*ap*ap*cp*ap*cp*gp*gp*ap*gp*ap*g)-3') | severe acute respiratory syndrome coronavirus 2 | 34 | 21 | 0.84 | HL | train |
9dn4_D_C | 9dn4 | crystal structure of a sars-cov-2 20-mer rna in complex with fab bl3-6s97n | no | immune system | 2024-09-16 | 2024-09-25 | x-ray diffraction | 1.9 | 0.223 | 0.176 | 40557870 | 10.1093/nar/gkaf559 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | D | C | MGWSCIILFLVATATGVHSEVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCHHHHHH | MGWSCIILFLVATATGVHSDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPNTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPNTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 20.839558 | 23.12669 | 250 | 233 | 217 | 212 | 222 | 212 | 98 | fab bl3-6s97n heavy chain | fab bl3-6s97n light chain | mus musculus | mus musculus | F | RNA | rna (5'-r(p*cp*up*cp*gp*up*cp*up*gp*ap*ap*ap*cp*ap*cp*gp*gp*ap*gp*ap*g)-3') | severe acute respiratory syndrome coronavirus 2 | 33 | 20 | 0.83 | HL | train |
9jkq_N | 9jkq | cryo-em structure of the meth-bound htaar1-gs complex | no | signaling protein | 2024-09-16 | 2024-10-16 | electron microscopy | 2.66 | N.A. | N.A. | 39358311 | 10.1021/acs.jmedchem.4c01961 | 0 | auth_asym_id | VH | IGHV3 | N.A. | N | N.A. | MGMKYLLPTAAAGLLLLAAQPAMAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.933312 | 0 | 162 | 0 | 128 | 0 | 128 | 0 | 0 | nb35 | N.A. | homo sapiens | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 50;30 | 15;11 | 0.58;0.73 | H_only | train |
9gsl_B | 9gsl | cryo-em structure of human slc35b1 in inward facing conformation | yes | transport protein | 2024-09-16 | 2025-05-21 | electron microscopy | 3.37 | N.A. | N.A. | 40399679 | 10.1038/s41586-025-09069-w | 0 | auth_asym_id | scFv | N.A. | N.A. | B | N.A. | DIVMTQSPASLTVSLGQSVTISCRASENVEYYGTSLMQWYQQKPGQPPKFLIYGASNIESGVPARFSGSGSGTDFSLNIHPVEEDDIAMYFCQQSRKVPYTFGSGTKLEIKGSGKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNA... | N.A. | DIVMTQSPASLTVSLGQSVTISCRASENVEYYGTSLMQWYQQKPGQPPKFLIYGASNIESGVPARFSGSGSGTDFSLNIHPVEEDDIAMYFCQQSRKVPYTFGSGTKLEIKGSGKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNA... | N.A. | 18.621109 | 0 | 612 | 0 | 241 | 0 | 612 | 0 | 0 | fv-mbp | N.A. | mus musculus | N.A. | A | protein | solute carrier family 35 member b1 | homo sapiens | 29 | 15 | 0.83 | H_only | train |
9gst_H_L | 9gst | ln02-ml85 fab in complex with crosslinked ds-sosip hiv-1 env trimer | no | viral protein | 2024-09-16 | 2025-09-24 | electron microscopy | 3.1 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV3 | H | L | QAPLPESGPGVVRPTGTLSLTCTAAYGSISRHFWGWVRQSPQGTLEWIAHMHHLGVKYVNPSLKNRVSISMDTSKNQMSLTLKTVTATDAAKYHCVRMGARMSDIAFFSFGDWGPGSLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | SYVLGQSSSMSVAPGQTAKISCWGYYMGTKPVNWYQLKPGRAPSLIISYDDERASGTPARFSGSHSGSTATLTISNVVPADEADYFCQVWDSYYEEIYFGGGTALTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QAPLPESGPGVVRPTGTLSLTCTAAYGSISRHFWGWVRQSPQGTLEWIAHMHHLGVKYVNPSLKNRVSISMDTSKNQMSLTLKTVTATDAAKYHCVRMGARMSDIAFFSFGDWGPGSLVTVSS | YVLGQSSSMSVAPGQTAKISCWGYYMGTKPVNWYQLKPGRAPSLIISYDDERASGTPARFSGSHSGSTATLTISNVVPADEADYFCQVWDSYYEEIYFGGGTALTVLG | 14.185185 | 13.679417 | 224 | 214 | 123 | 108 | 123 | 108 | 46 | heavy chain fab of antibody ln02-ml85 | light chain of antibody ln02-ml85 | homo sapiens | homo sapiens | A;B | protein;protein | envelope glycoprotein gp160;envelope glycoprotein gp160 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 18;41 | 10;17 | 0.91;0.89 | HL | train |
9dng_H_L | 9dng | structure of rat beta-arrestin 1 by fiducial-assisted cryo-em | yes | signaling protein/immune system | 2024-09-17 | 2025-01-22 | electron microscopy | 3.52 | N.A. | N.A. | 39763753 | 10.1101/2024.12.27.630464 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | EVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSA | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIK | 14.45624 | 13.532857 | 225 | 212 | 125 | 108 | 125 | 108 | 50 | anti-bril fab heavy chain | anti-bril fab light chain | homo sapiens | homo sapiens | A | protein | beta-arrestin-1,soluble cytochrome b562 | rattus norvegicus | 36 | 17 | 0.89 | HL | train |
9dnm_H_L | 9dnm | structure of rat beta-arrestin 1 bound to allosteric inhibitor | yes | signaling protein/immune system | 2024-09-17 | 2025-01-22 | electron microscopy | 3.47 | N.A. | N.A. | 39763753 | 10.1101/2024.12.27.630464 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | EVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSA | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIK | 14.527813 | 13.540752 | 225 | 212 | 125 | 108 | 125 | 108 | 46 | anti-bril fab heavy chain | anti-bril fab light chain | homo sapiens | homo sapiens | A | protein | beta-arrestin-1,soluble cytochrome b562 | rattus norvegicus | 39 | 18 | 0.86 | HL | train |
9jks_S | 9jks | 6o-hcar3-gi complex | no | membrane protein | 2024-09-17 | 2025-10-29 | electron microscopy | 3.31 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.664177 | 0 | 247 | 0 | 233 | 0 | 247 | 0 | 0 | scfv16 | N.A. | homo sapiens | N.A. | B;C | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1 | homo sapiens;homo sapiens | 21;29 | 9;17 | 0.82;0.94 | H_only | train |
9jkt_S | 9jkt | pla-hcar3-gi complex | no | membrane protein | 2024-09-17 | 2025-10-29 | electron microscopy | 3.05 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.67025 | 0 | 247 | 0 | 233 | 0 | 247 | 0 | 0 | scfv16 | N.A. | homo sapiens | N.A. | B;C | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1 | homo sapiens;homo sapiens | 25;31 | 11;18 | 0.79;0.95 | H_only | train |
9jkv_S | 9jkv | ibc-hcar3-gi complex | no | membrane protein | 2024-09-17 | 2025-10-29 | electron microscopy | 3.26 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.401936 | 0 | 247 | 0 | 233 | 0 | 247 | 0 | 0 | scfv16 | N.A. | homo sapiens | N.A. | B;C | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1 | homo sapiens;homo sapiens | 27;33 | 12;19 | 0.86;0.9 | H_only | train |
9jky_S | 9jky | acifran-hcar2-gi complex | no | membrane protein | 2024-09-17 | 2025-10-29 | electron microscopy | 2.72 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.294897 | 0 | 247 | 0 | 233 | 0 | 247 | 0 | 0 | scfv16 | N.A. | homo sapiens | N.A. | C;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 38;23 | 23;8 | 0.88;0.73 | H_only | train |
9gu0_H_G | 9gu0 | human adult muscle nachr in resting state in detergent with alpha-bungarotoxin | no | membrane protein | 2024-09-18 | 2025-05-14 | electron microscopy | 2.96 | N.A. | N.A. | 40252219 | 10.1016/j.celrep.2025.115581 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | H | G | EVQLQESGPGLVQPSETLSLTCTVSGFSLTSYSVSWLRQPSGKGPEWMGRMWDDGGTVYNSGLKSRLSISRDTSKNQVFLKMNSLQTDDTGTYYCTRDERIRAINWFAYWGQGTLVTVSSAETTAPSVYPLAPGTALKSNSMVTLGCLVKGYFPEPVTVTWNSGALSSGVHTFPAVLQSGLYTLTSSVTVPSSTWPSQTVTCNVAHPGQQHQRWTRKLC | DIVITQSPSLLSASVGDRVTLTCKGSQNIDNYLAWYQQKLGEAPKLLIYKTNSLQTGIPSRFSGSGSGTDYTLTISSLHSEDLATYYCYQYINGYTFGTGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPVVKSFNRNEC | EVQLQESGPGLVQPSETLSLTCTVSGFSLTSYSVSWLRQPSGKGPEWMGRMWDDGGTVYNSGLKSRLSISRDTSKNQVFLKMNSLQTDDTGTYYCTRDERIRAINWFAYWGQGTLVTVSSAETTAPSVYPLAPGTALKSNSMVTLGCLVKGYFPEPVTVTWNSGALSSGVHTFPAVLQSGLYTLTSSVTVPSSTWPSQTVTCNVAHPGQQHQRWTRKLC | DIVITQSPSLLSASVGDRVTLTCKGSQNIDNYLAWYQQKLGEAPKLLIYKTNSLQTGIPSRFSGSGSGTDYTLTISSLHSEDLATYYCYQYINGYTFGTGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPVVKSFNRNE | 21.741476 | 22.510618 | 219 | 213 | 192 | 206 | 219 | 212 | 88 | fab35 heavy chain | fab35 light chain | rattus norvegicus | rattus norvegicus | A | protein | acetylcholine receptor subunit alpha | homo sapiens | 42 | 17 | 0.74 | HL | train |
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