PDB_ID_chain stringlengths 6 10 | PDB_ID stringlengths 4 4 | Title stringlengths 4 230 | Mutation(s) stringclasses 2
values | Classification stringclasses 305
values | Deposit_date stringdate 1976-03-17 00:00:00 2026-01-20 00:00:00 | Release_date stringdate 1976-05-19 00:00:00 2026-02-25 00:00:00 | Method stringclasses 5
values | Resolution stringclasses 459
values | R_free stringclasses 227
values | R_work stringclasses 211
values | PMID stringlengths 4 8 | DOI stringlengths 4 68 | Model_index int64 0 76 | Asym_ID_type stringclasses 2
values | Ab_type stringclasses 30
values | H_subgroup stringclasses 8
values | L_subgroup stringclasses 19
values | H_chain_ID stringclasses 60
values | L_chain_ID stringclasses 58
values | H_fas_seq stringlengths 4 919 | L_fas_seq stringlengths 4 627 | H_filled_pdb_seq stringlengths 4 896 | L_filled_pdb_seq stringlengths 4 523 | H_mean_radius float64 0 79.7 | L_mean_radius float64 0 84.3 | H_fas_seq_len int64 0 919 | L_fas_seq_len int64 0 627 | H_pdb_seq_len int64 0 879 | L_pdb_seq_len int64 0 523 | H_filled_seq_len int64 0 896 | L_filled_seq_len int64 0 523 | HL_inf_res_num int64 0 175 | H_mol_name stringlengths 2 331 | L_mol_name stringlengths 2 151 | H_species stringclasses 68
values | L_species stringclasses 42
values | Ag_chain_ID(s) stringclasses 279
values | Ag_type(s) stringclasses 16
values | Ag_mol_name(s) stringlengths 2 390 | Ag_species stringclasses 743
values | Ab_ag_inf_res_num stringlengths 1 11 | CDR_inf_res_num stringclasses 444
values | CDR_inf_res_ratio stringlengths 1 19 | hl_label stringclasses 3
values | split stringclasses 1
value |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
9co8_E | 9co8 | jn.1 spike/nanosota-9 complex | no | viral protein/immune system | 2024-07-16 | 2024-11-20 | electron microscopy | 2.99 | N.A. | N.A. | 39591462 | 10.1371/journal.ppat.1012726 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | QVQLQESGGGLVQPGGSLRLSCTASGIALHTHATGWFRQAPGKEREGVSCISSGDGTTYYEDSVEGRFTISRDNAKNTVYLQMNSLKLEDTAVYYCAADPGAVCHSGSYYYTDDDFYYRGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQPGGSLRLSCTASGIALHTHATGWFRQAPGKEREGVSCISSGDGTTYYEDSVEGRFTISRDNAKNTVYLQMNSLKLEDTAVYYCAADPGAVCHSGSYYYTDDDFYYRGQGTQVTVSS | N.A. | 13.968977 | 0 | 150 | 0 | 129 | 0 | 129 | 0 | 0 | nanosota-9 | N.A. | vicugna pacos | N.A. | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 42 | 17 | 0.71 | H_only | train |
9co8_F | 9co8 | jn.1 spike/nanosota-9 complex | no | viral protein/immune system | 2024-07-16 | 2024-11-20 | electron microscopy | 2.99 | N.A. | N.A. | 39591462 | 10.1371/journal.ppat.1012726 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | QVQLQESGGGLVQPGGSLRLSCTASGIALHTHATGWFRQAPGKEREGVSCISSGDGTTYYEDSVEGRFTISRDNAKNTVYLQMNSLKLEDTAVYYCAADPGAVCHSGSYYYTDDDFYYRGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQPGGSLRLSCTASGIALHTHATGWFRQAPGKEREGVSCISSGDGTTYYEDSVEGRFTISRDNAKNTVYLQMNSLKLEDTAVYYCAADPGAVCHSGSYYYTDDDFYYRGQGTQVTVSS | N.A. | 14.006684 | 0 | 150 | 0 | 129 | 0 | 129 | 0 | 0 | nanosota-9 | N.A. | vicugna pacos | N.A. | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 24 | 12 | 0.92 | H_only | train |
9co9_E | 9co9 | local refinement of jn.1 spike/nanosota-9 complex | no | viral protein/immune system | 2024-07-16 | 2024-11-20 | electron microscopy | 3.44 | N.A. | N.A. | 39591462 | 10.1371/journal.ppat.1012726 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | QVQLQESGGGLVQPGGSLRLSCTASGIALHTHATGWFRQAPGKEREGVSCISSGDGTTYYEDSVEGRFTISRDNAKNTVYLQMNSLKLEDTAVYYCAADPGAVCHSGSYYYTDDDFYYRGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQPGGSLRLSCTASGIALHTHATGWFRQAPGKEREGVSCISSGDGTTYYEDSVEGRFTISRDNAKNTVYLQMNSLKLEDTAVYYCAADPGAVCHSGSYYYTDDDFYYRGQGTQVTVSS | N.A. | 13.93257 | 0 | 150 | 0 | 129 | 0 | 129 | 0 | 0 | nanosota-9 | N.A. | vicugna pacos | N.A. | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 43 | 17 | 0.71 | H_only | train |
9co9_D | 9co9 | local refinement of jn.1 spike/nanosota-9 complex | no | viral protein/immune system | 2024-07-16 | 2024-11-20 | electron microscopy | 3.44 | N.A. | N.A. | 39591462 | 10.1371/journal.ppat.1012726 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | QVQLQESGGGLVQPGGSLRLSCTASGIALHTHATGWFRQAPGKEREGVSCISSGDGTTYYEDSVEGRFTISRDNAKNTVYLQMNSLKLEDTAVYYCAADPGAVCHSGSYYYTDDDFYYRGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQPGGSLRLSCTASGIALHTHATGWFRQAPGKEREGVSCISSGDGTTYYEDSVEGRFTISRDNAKNTVYLQMNSLKLEDTAVYYCAADPGAVCHSGSYYYTDDDFYYRGQGTQVTVSS | N.A. | 13.953391 | 0 | 150 | 0 | 129 | 0 | 129 | 0 | 0 | nanosota-9 | N.A. | vicugna pacos | N.A. | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 44 | 18 | 0.75 | H_only | train |
9iru_B_A | 9iru | cryo-em structure of tcr-4b1 complex | no | immune system | 2024-07-16 | 2026-01-21 | electron microscopy | 3.14 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV6 | B | A | MDWTWVFLFLLSVTAGVHSQVQLQQSGAELMKPGASVRISCKATGYTFSRYWIEWVKQRSGHGLEWIGEILPGSGSTNYNEKFKGKATFTADTSSNTAYMQFSSLTSEDSAVYYCARCYRYDAYGMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTC | MVSTSQLLGLLLFWTSASRCDIVMTQSPATLSVTPGDRVSLSCRASQSISGYLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGSDFTLSINSVEPEDVGVYYCQNGHSFPLTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECMKRSPHPNKG | QVQLQQSGAELMKPGASVRISCKATGYTFSRYWIEWVKQRSGHGLEWIGEILPGSGSTNYNEKFKGKATFTADTSSNTAYMQFSSLTSEDSAVYYCARCYRYDAYGMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | DIVMTQSPATLSVTPGDRVSLSCRASQSISGYLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGSDFTLSINSVEPEDVGVYYCQNGHSFPLTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.908419 | 23.663725 | 248 | 244 | 224 | 213 | 224 | 213 | 100 | 4b1-h | 4b1-l | homo sapiens | homo sapiens | e | protein | t-cell surface glycoprotein cd3 epsilon chain | homo sapiens | 45 | 20 | 0.87 | HL | train |
9g5z_C | 9g5z | nanobody-mediated activation and inhibition of staphylococcus aureus mazf | no | toxin | 2024-07-17 | 2024-07-24 | x-ray diffraction | 3.43 | 0.283 | 0.244 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | AQVQLQESGGGLVQPGGSLRLSCAASGFTFSSYDMSWVRQAPGKGLEWVSAINRGGGSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCATWWVDSYDYWGQGTQVTVSSHHHHHH | N.A. | QLQESGGGLVQPGGSLRLSCAASGFTFSSYDMSWVRQAPGKGLEWVSAINRGGGSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCATWWVDSYDYWGQGTQVTVSSHH | N.A. | 13.855337 | 0 | 124 | 0 | 117 | 0 | 117 | 0 | 0 | nanobody 11 | N.A. | lama glama | N.A. | A | protein | endoribonuclease mazf | staphylococcus aureus | 28 | 11 | 0.85 | H_only | train |
9g5z_D | 9g5z | nanobody-mediated activation and inhibition of staphylococcus aureus mazf | no | toxin | 2024-07-17 | 2024-07-24 | x-ray diffraction | 3.43 | 0.283 | 0.244 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | AQVQLQESGGGLVQPGGSLRLSCAASGFTFSSYDMSWVRQAPGKGLEWVSAINRGGGSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCATWWVDSYDYWGQGTQVTVSSHHHHHH | N.A. | QLQESGGGLVQPGGSLRLSCAASGFTFSSYDMSWVRQAPGKGLEWVSAINRGGGSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCATWWVDSYDYWGQGTQVTVS | N.A. | 13.294518 | 0 | 124 | 0 | 114 | 0 | 114 | 0 | 0 | nanobody 11 | N.A. | lama glama | N.A. | B | protein | endoribonuclease mazf | staphylococcus aureus | 27 | 11 | 0.85 | H_only | train |
9cp4_H_L | 9cp4 | cryo-em structure of human gat3 in complex with snap-5114, inward-open conformation | yes | membrane protein | 2024-07-17 | 2025-05-07 | electron microscopy | 3.42 | N.A. | N.A. | 40268946 | 10.1038/s41467-025-59066-w | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | H | L | EVQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQSPEKRLEWVAEISSGGRYIYYSDTVTGRFTISRDNARNILHLEMSSLRSEDTAMYYCARGEVRQRGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRAAALEVLFQGPGSHHHHHHHHHH | ENVLTQSPAIMSTSPGEKVTMTCRASSSVGSSYLHWYQQKSGASPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSVEAEDAATYYCQQFSGYPLTFGSGTKLEMKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE | EVQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQSPEKRLEWVAEISSGGRYIYYSDTVTGRFTISRDNARNILHLEMSSLRSEDTAMYYCARGEVRQRGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR | ENVLTQSPAIMSTSPGEKVTMTCRASSSVGSSYLHWYQQKSGASPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSVEAEDAATYYCQQFSGYPLTFGSGTKLEMKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN | 21.616583 | 23.199236 | 242 | 214 | 215 | 213 | 219 | 213 | 103 | 9d5 heavy chain | 9d5 light chain | mus musculus | mus musculus | A | protein | sodium- and chloride-dependent gaba transporter 3 | homo sapiens | 32 | 14 | 0.88 | HL | train |
9cp5_H_L | 9cp5 | cryo-em structure of human gat3, apo state, inward-open conformation | yes | membrane protein | 2024-07-17 | 2025-05-07 | electron microscopy | 3.51 | N.A. | N.A. | 40268946 | 10.1038/s41467-025-59066-w | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | H | L | EVQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQSPEKRLEWVAEISSGGRYIYYSDTVTGRFTISRDNARNILHLEMSSLRSEDTAMYYCARGEVRQRGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRAAALEVLFQGPGSHHHHHHHHHH | ENVLTQSPAIMSTSPGEKVTMTCRASSSVGSSYLHWYQQKSGASPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSVEAEDAATYYCQQFSGYPLTFGSGTKLEMKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE | EVQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQSPEKRLEWVAEISSGGRYIYYSDTVTGRFTISRDNARNILHLEMSSLRSEDTAMYYCARGEVRQRGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR | ENVLTQSPAIMSTSPGEKVTMTCRASSSVGSSYLHWYQQKSGASPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSVEAEDAATYYCQQFSGYPLTFGSGTKLEMKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN | 21.597376 | 23.177168 | 242 | 214 | 215 | 213 | 219 | 213 | 105 | 9d5 heavy chain | 9d5 light chain | mus musculus | mus musculus | A | protein | sodium- and chloride-dependent gaba transporter 3 | homo sapiens | 33 | 14 | 0.82 | HL | train |
9isf_B | 9isf | crystal structure of nanobody 14 in complex with hsv-2 gd | no | antiviral protein | 2024-07-17 | 2025-05-28 | x-ray diffraction | 3.72 | 0.347 | 0.301 | 40328740 | 10.1038/s41467-025-58669-7 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QLQLVESGGGSVQSGGSLRLSCAASGYPESRHCMGWFRQAPGKEREGVALIDSSGRTTYADSVKGRFTISQDNAKNTLYLQMNTLKPEDTAMYYCAADFYAAATCYVSPNGRFPPFRYRGQGTQVTVSS | N.A. | QLQLVESGGGSVQSGGSLRLSCAASGYPESRHCMGWFRQAPGKEREGVALIDSSGRTTYADSVKGRFTISQDNAKNTLYLQMNTLKPEDTAMYYCAADFYAAATCYVSPNGRFPPFRYRGQGTQVTVSS | N.A. | 13.807447 | 0 | 129 | 0 | 129 | 0 | 129 | 0 | 0 | nanobody 14 | N.A. | vicugna pacos | N.A. | A | protein | glycoprotein d | human alphaherpesvirus 2 | 39 | 15 | 0.94 | H_only | train |
9con_H | 9con | human kv1.3-h451v with a0194009g09 nanobodies conformation 1 | yes | immune system | 2024-07-17 | 2026-01-28 | electron microscopy | 3.06 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | H | N.A. | MEVQLVESGGGLVQAGGSLGLSCSASGLLFSRNSAGWYRQAPGKQREFVARIRMGGSINYADTVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCSSWRTGFYEYWGQGTLVTVSSAAAHHHHHH | N.A. | EVQLVESGGGLVQAGGSLGLSCSASGLLFSRNSAGWYRQAPGKQREFVARIRMGGSINYADTVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCSSWRTGFYEYWGQGTLVTVS | N.A. | 13.361104 | 0 | 126 | 0 | 115 | 0 | 115 | 0 | 0 | a0194009g09 nanobody | N.A. | lama glama | N.A. | A;C | protein;protein | potassium voltage-gated channel subfamily a member 3/mvenus fusion protein,green fluorescent protein;potassium voltage-gated channel subfamily a member 3/mvenus fusion protein,green fluorescent protein | homo sapiens;homo sapiens | 22;24 | 10;6 | 0.91;0.5 | H_only | train |
9con_G | 9con | human kv1.3-h451v with a0194009g09 nanobodies conformation 1 | yes | immune system | 2024-07-17 | 2026-01-28 | electron microscopy | 3.06 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | G | N.A. | MEVQLVESGGGLVQAGGSLGLSCSASGLLFSRNSAGWYRQAPGKQREFVARIRMGGSINYADTVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCSSWRTGFYEYWGQGTLVTVSSAAAHHHHHH | N.A. | EVQLVESGGGLVQAGGSLGLSCSASGLLFSRNSAGWYRQAPGKQREFVARIRMGGSINYADTVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCSSWRTGFYEYWGQGTLVTVS | N.A. | 13.361111 | 0 | 126 | 0 | 115 | 0 | 115 | 0 | 0 | a0194009g09 nanobody | N.A. | lama glama | N.A. | A;D | protein;protein | potassium voltage-gated channel subfamily a member 3/mvenus fusion protein,green fluorescent protein;potassium voltage-gated channel subfamily a member 3/mvenus fusion protein,green fluorescent protein | homo sapiens;homo sapiens | 24;22 | 6;10 | 0.5;0.91 | H_only | train |
9con_E | 9con | human kv1.3-h451v with a0194009g09 nanobodies conformation 1 | yes | immune system | 2024-07-17 | 2026-01-28 | electron microscopy | 3.06 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | MEVQLVESGGGLVQAGGSLGLSCSASGLLFSRNSAGWYRQAPGKQREFVARIRMGGSINYADTVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCSSWRTGFYEYWGQGTLVTVSSAAAHHHHHH | N.A. | EVQLVESGGGLVQAGGSLGLSCSASGLLFSRNSAGWYRQAPGKQREFVARIRMGGSINYADTVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCSSWRTGFYEYWGQGTLVTVS | N.A. | 13.361105 | 0 | 126 | 0 | 115 | 0 | 115 | 0 | 0 | a0194009g09 nanobody | N.A. | lama glama | N.A. | B;C | protein;protein | potassium voltage-gated channel subfamily a member 3/mvenus fusion protein,green fluorescent protein;potassium voltage-gated channel subfamily a member 3/mvenus fusion protein,green fluorescent protein | homo sapiens;homo sapiens | 24;22 | 6;10 | 0.5;0.91 | H_only | train |
9con_F | 9con | human kv1.3-h451v with a0194009g09 nanobodies conformation 1 | yes | immune system | 2024-07-17 | 2026-01-28 | electron microscopy | 3.06 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | MEVQLVESGGGLVQAGGSLGLSCSASGLLFSRNSAGWYRQAPGKQREFVARIRMGGSINYADTVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCSSWRTGFYEYWGQGTLVTVSSAAAHHHHHH | N.A. | EVQLVESGGGLVQAGGSLGLSCSASGLLFSRNSAGWYRQAPGKQREFVARIRMGGSINYADTVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCSSWRTGFYEYWGQGTLVTVS | N.A. | 13.361119 | 0 | 126 | 0 | 115 | 0 | 115 | 0 | 0 | a0194009g09 nanobody | N.A. | lama glama | N.A. | B;D | protein;protein | potassium voltage-gated channel subfamily a member 3/mvenus fusion protein,green fluorescent protein;potassium voltage-gated channel subfamily a member 3/mvenus fusion protein,green fluorescent protein | homo sapiens;homo sapiens | 22;24 | 10;6 | 0.91;0.5 | H_only | train |
9cpp_F_G | 9cpp | crystal structure of sars-cov-2 receptor binding domain in complex with antibodies m22-17 and cc12.3 | no | viral protein/immune system | 2024-07-18 | 2025-06-25 | x-ray diffraction | 3.19 | 0.279 | 0.232 | 40674170 | 10.1084/jem.20241563 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | F | G | QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 21.003546 | 22.938229 | 220 | 214 | 212 | 211 | 217 | 211 | 95 | cc12.3 fab heavy chain | cc12.3 fab light chain | homo sapiens | homo sapiens | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 58 | 23 | 0.85 | HL | train |
9cpp_H_L | 9cpp | crystal structure of sars-cov-2 receptor binding domain in complex with antibodies m22-17 and cc12.3 | no | viral protein/immune system | 2024-07-18 | 2025-06-25 | x-ray diffraction | 3.19 | 0.279 | 0.232 | 40674170 | 10.1084/jem.20241563 | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGKV4 | H | L | QMQLVQSGTEVKKPGESLKISCKGSGYGFITYWIGWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGSGIFTPMDVWGQGTTVAVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQLTQSPDSLAVSLGERATINCKSSQSVLYSSINKNYLAWYQQKPGQPPKLLIYWTSTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QMQLVQSGTEVKKPGESLKISCKGSGYGFITYWIGWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGSGIFTPMDVWGQGTTVAVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQLTQSPDSLAVSLGERATINCKSSQSVLYSSINKNYLAWYQQKPGQPPKLLIYWTSTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.02427 | 23.421886 | 222 | 220 | 215 | 217 | 220 | 217 | 96 | m22-17 fab heavy chain | m22-17 fab light chain | mus musculus | mus musculus | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 55 | 24 | 0.83 | HL | train |
9cpq_F_G | 9cpq | crystal structure of sars-cov-2 receptor binding domain in complex with antibodies m22-44 and cc12.3 | no | viral protein/immune system | 2024-07-18 | 2025-06-25 | x-ray diffraction | 2.88 | 0.251 | 0.202 | 40674170 | 10.1084/jem.20241563 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | F | G | QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 21.402592 | 22.929672 | 220 | 214 | 218 | 212 | 218 | 212 | 97 | cc12.3 fab heavy chain | cc12.3 fab light chain | homo sapiens | homo sapiens | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 56 | 21 | 0.84 | HL | train |
9cpq_H_L | 9cpq | crystal structure of sars-cov-2 receptor binding domain in complex with antibodies m22-44 and cc12.3 | no | viral protein/immune system | 2024-07-18 | 2025-06-25 | x-ray diffraction | 2.88 | 0.251 | 0.202 | 40674170 | 10.1084/jem.20241563 | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGKV4 | H | L | QMQLVQSGTEVKKPGESLKISCKGSGYGLITYWIGWVRQMSGKGLEWMGIIYPADSETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGSGIFTPMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQLTQSPDSLAVSLGERATINCKSSQSVLYSSINKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QMQLVQSGTEVKKPGESLKISCKGSGYGLITYWIGWVRQMSGKGLEWMGIIYPADSETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGSGIFTPMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQLTQSPDSLAVSLGERATINCKSSQSVLYSSINKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.318008 | 23.503939 | 222 | 220 | 220 | 217 | 220 | 217 | 107 | m22-44 fab heavy chain | m22-44 fab light chain | mus musculus | mus musculus | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 50 | 23 | 0.88 | HL | train |
9cpr_F_G | 9cpr | crystal structure of sars-cov-2 receptor binding domain in complex with antibodies m22-90 and cc12.3 | no | viral protein/immune system | 2024-07-18 | 2025-06-25 | x-ray diffraction | 3.1 | 0.247 | 0.194 | 40674170 | 10.1084/jem.20241563 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | F | G | QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 21.750746 | 22.724949 | 220 | 214 | 217 | 212 | 217 | 212 | 97 | cc12.3 fab heavy chain | cc12.3 fab light chain | homo sapiens | homo sapiens | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 54 | 22 | 0.85 | HL | train |
9cpr_H_L | 9cpr | crystal structure of sars-cov-2 receptor binding domain in complex with antibodies m22-90 and cc12.3 | no | viral protein/immune system | 2024-07-18 | 2025-06-25 | x-ray diffraction | 3.1 | 0.247 | 0.194 | 40674170 | 10.1084/jem.20241563 | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGKV4 | H | L | QMQLVQSGTEVKKPGESLKISCKGSGYGIITYWIGWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGSSGISTPMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQLTQSPDSLAVSLGERATINCKSSQTLLYSSINKNYLAWYQQKPGQPPKLLIYWTSTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QMQLVQSGTEVKKPGESLKISCKGSGYGIITYWIGWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGSSGISTPMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQLTQSPDSLAVSLGERATINCKSSQTLLYSSINKNYLAWYQQKPGQPPKLLIYWTSTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.110464 | 23.483513 | 222 | 220 | 214 | 217 | 220 | 217 | 100 | m22-90 fab heavy chain | m22-90 fab light chain | mus musculus | mus musculus | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 55 | 24 | 0.86 | HL | train |
9cps_F_G | 9cps | crystal structure of sars-cov-2 receptor binding domain in complex with antibodies m22-91 and cc12.3 | no | immune system/viral protein | 2024-07-18 | 2025-06-25 | x-ray diffraction | 3.03 | 0.253 | 0.215 | 40674170 | 10.1084/jem.20241563 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | F | G | QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 21.551462 | 22.683855 | 220 | 214 | 213 | 211 | 218 | 211 | 94 | cc12.3 fab heavy chain | cc12.3 fab light chain | homo sapiens | homo sapiens | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 55 | 22 | 0.85 | HL | train |
9cps_H_L | 9cps | crystal structure of sars-cov-2 receptor binding domain in complex with antibodies m22-91 and cc12.3 | no | immune system/viral protein | 2024-07-18 | 2025-06-25 | x-ray diffraction | 3.03 | 0.253 | 0.215 | 40674170 | 10.1084/jem.20241563 | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGKV4 | H | L | QMQLVQSGTEVKKPGESLKISCKGSGYGFITYWIGWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGSGISTPLDVWGQGTTVAVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQLTQSPDSLAVSLGERATINCKSSQSILYSSIIKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFALTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QMQLVQSGTEVKKPGESLKISCKGSGYGFITYWIGWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGSGISTPLDVWGQGTTVAVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQLTQSPDSLAVSLGERATINCKSSQSILYSSIIKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFALTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.090845 | 23.228088 | 222 | 220 | 209 | 204 | 220 | 217 | 100 | m22-91 fab heavy chain | m22-91 fab light chain | mus musculus | mus musculus | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 57 | 22 | 0.79 | HL | train |
9cpt_C_G | 9cpt | crystal structure of sars-cov-2 receptor binding domain in complex with antibodies m22-92 and cc12.3 | no | immune system/viral protein | 2024-07-18 | 2025-06-25 | x-ray diffraction | 3.51 | 0.269 | 0.221 | 40674170 | 10.1084/jem.20241563 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | C | G | QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 21.704363 | 22.735912 | 220 | 214 | 218 | 211 | 218 | 211 | 100 | cc12.3 fab heavy chain | cc12.3 fab light chain | homo sapiens | homo sapiens | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 51 | 21 | 0.81 | HL | train |
9cpt_H_L | 9cpt | crystal structure of sars-cov-2 receptor binding domain in complex with antibodies m22-92 and cc12.3 | no | immune system/viral protein | 2024-07-18 | 2025-06-25 | x-ray diffraction | 3.51 | 0.269 | 0.221 | 40674170 | 10.1084/jem.20241563 | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGKV4 | H | L | QMQLVQSGTAVKKPGESLKISCKGSGYGFITYWIAWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGSGIFTPMDVWGQGTTVAVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQLTQSPDSLAVSLGERATINCKSSQSVLYSSINKNYLAWYQQKPGQPPKLLIYWTSTRESGVPDRFSGSGSGTDFALTISSLQAEDVAVYYCQQYSNTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QMQLVQSGTAVKKPGESLKISCKGSGYGFITYWIAWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGSGIFTPMDVWGQGTTVAVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQLTQSPDSLAVSLGERATINCKSSQSVLYSSINKNYLAWYQQKPGQPPKLLIYWTSTRESGVPDRFSGSGSGTDFALTISSLQAEDVAVYYCQQYSNTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.252825 | 23.466124 | 222 | 220 | 215 | 217 | 220 | 217 | 105 | m22-92 fab heavy chain | m22-92 fab light chain | mus musculus | mus musculus | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 51 | 20 | 0.8 | HL | train |
9cpu_F_G | 9cpu | crystal structure of sars-cov-2 receptor binding domain in complex with antibodies c03-0304 and cc12.3 | no | viral protein/immune system | 2024-07-18 | 2025-06-25 | x-ray diffraction | 2.6 | 0.239 | 0.206 | 40674170 | 10.1084/jem.20241563 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | F | G | QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 21.105787 | 22.935246 | 220 | 214 | 212 | 211 | 218 | 211 | 90 | cc12.3 fab heavy chain | cc12.3 fab light chain | homo sapiens | homo sapiens | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 59 | 21 | 0.75 | HL | train |
9cpu_H_L | 9cpu | crystal structure of sars-cov-2 receptor binding domain in complex with antibodies c03-0304 and cc12.3 | no | viral protein/immune system | 2024-07-18 | 2025-06-25 | x-ray diffraction | 2.6 | 0.239 | 0.206 | 40674170 | 10.1084/jem.20241563 | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGKV4 | H | L | EVQLVQSGAEVKKPGESLKISCKGSGYSFITYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAMYYCAGSSGISTPMDVWGRGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSFNKDYLAWYQQKPGQPPKLLIYWASIRESGVPDRFSGSGSGTDFTLTISGLQAEDVAVYYCQQYSRTPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGAEVKKPGESLKISCKGSGYSFITYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAMYYCAGSSGISTPMDVWGRGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSFNKDYLAWYQQKPGQPPKLLIYWASIRESGVPDRFSGSGSGTDFTLTISGLQAEDVAVYYCQQYSRTPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.09902 | 23.624733 | 222 | 220 | 216 | 219 | 219 | 219 | 97 | c03-0304 fab heavy chain | c03-0304 fab light chain | mus musculus | mus musculus | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 55 | 22 | 0.85 | HL | train |
9cpv_C_D | 9cpv | crystal structure of sars-cov-2 receptor binding domain in complex with antibodies c03-0614 and cc12.3 | no | viral protein/immune system | 2024-07-18 | 2025-06-25 | x-ray diffraction | 3 | 0.262 | 0.207 | 40674170 | 10.1084/jem.20241563 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | C | D | QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 20.993694 | 22.969316 | 220 | 214 | 211 | 212 | 217 | 212 | 89 | cc12.3 fab heavy chain | cc12.3 fab light chain | homo sapiens | homo sapiens | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 52 | 19 | 0.83 | HL | train |
9cpv_H_L | 9cpv | crystal structure of sars-cov-2 receptor binding domain in complex with antibodies c03-0614 and cc12.3 | no | viral protein/immune system | 2024-07-18 | 2025-06-25 | x-ray diffraction | 3 | 0.262 | 0.207 | 40674170 | 10.1084/jem.20241563 | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGKV4 | H | L | EVQLVQSGTEVKKPGESLKISCKGSGKSLIMYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAMYYCAGGSGIFTPMDVWGQGTAVAVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQLTQSPDSLAVSLGERATINCKSSQSVLYSSINKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGTEVKKPGESLKISCKGSGKSLIMYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAMYYCAGGSGIFTPMDVWGQGTAVAVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQLTQSPDSLAVSLGERATINCKSSQSVLYSSINKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 22.395613 | 23.56536 | 222 | 220 | 220 | 218 | 220 | 218 | 105 | c03-0614 fab heavy chain | c03-0614 fab light chain | mus musculus | mus musculus | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 53 | 24 | 0.86 | HL | train |
9cpw_C_D | 9cpw | crystal structure of sars-cov-2 receptor binding domain in complex with antibodies c11-1036 and cc12.3 | no | viral protein/immune system | 2024-07-18 | 2025-06-25 | x-ray diffraction | 3.1 | 0.234 | 0.185 | 40674170 | 10.1084/jem.20241563 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | C | D | QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 21.62748 | 23.007854 | 220 | 214 | 218 | 213 | 218 | 213 | 98 | cc12.3 fab heavy chain | cc12.3 fab light chain | homo sapiens | homo sapiens | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 55 | 23 | 0.85 | HL | train |
9cpw_H_L | 9cpw | crystal structure of sars-cov-2 receptor binding domain in complex with antibodies c11-1036 and cc12.3 | no | viral protein/immune system | 2024-07-18 | 2025-06-25 | x-ray diffraction | 3.1 | 0.234 | 0.185 | 40674170 | 10.1084/jem.20241563 | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGKV4 | H | L | EVQLVQSGAEVKKPGEALKISCKGSGYRFITYWIGWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQITISADKSINTAYLQWSSLKASDTAMYYCAGSSGIFTPMDVWGQGTTVSVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQLTQSPDSLAVSLGERATINCKSSQSVLYSSINKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGAEVKKPGEALKISCKGSGYRFITYWIGWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQITISADKSINTAYLQWSSLKASDTAMYYCAGSSGIFTPMDVWGQGTTVSVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQLTQSPDSLAVSLGERATINCKSSQSVLYSSINKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.452763 | 23.446615 | 222 | 220 | 220 | 219 | 220 | 219 | 105 | c11-1036 fab heavy chain | c11-1036 fab light chain | mus musculus | mus musculus | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 55 | 23 | 0.88 | HL | train |
9cpx_C_D | 9cpx | crystal structure of sars-cov-2 receptor binding domain in complex with antibodies c03-0138 and cc12.3 | no | viral protein/immune system | 2024-07-18 | 2025-06-25 | x-ray diffraction | 2.7 | 0.271 | 0.23 | 40674170 | 10.1084/jem.20241563 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | C | D | QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 21.119125 | 22.991863 | 220 | 214 | 212 | 211 | 217 | 211 | 91 | cc12.3 fab heavy chain | cc12.3 fab light chain | homo sapiens | homo sapiens | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 56 | 21 | 0.84 | HL | train |
9cpx_H_L | 9cpx | crystal structure of sars-cov-2 receptor binding domain in complex with antibodies c03-0138 and cc12.3 | no | viral protein/immune system | 2024-07-18 | 2025-06-25 | x-ray diffraction | 2.7 | 0.271 | 0.23 | 40674170 | 10.1084/jem.20241563 | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGKV4 | H | L | EVQLVQSGAEVKKPGESLKISCKGSGYSLIMYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCAGGSGIFTPMDVWGQGTAVAVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIVMTQTPDSLAVSLGERATINCKSSQSLLYSSIKKNYLAWYQQKPGQPPKLLIYWTSTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGAEVKKPGESLKISCKGSGYSLIMYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCAGGSGIFTPMDVWGQGTAVAVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIVMTQTPDSLAVSLGERATINCKSSQSLLYSSIKKNYLAWYQQKPGQPPKLLIYWTSTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.309269 | 23.463324 | 222 | 220 | 220 | 217 | 220 | 217 | 104 | c03-0138 fab heavy chain | c03-0138 fab light chain | mus musculus | mus musculus | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 52 | 22 | 0.85 | HL | train |
9cpy_C_D | 9cpy | crystal structure of sars-cov-2 receptor binding domain in complex with antibodies c11-0860 and cc12.3 | no | viral protein/immune system | 2024-07-18 | 2025-06-25 | x-ray diffraction | 3.1 | 0.25 | 0.194 | 40674170 | 10.1084/jem.20241563 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | C | D | QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 21.085459 | 23.053654 | 220 | 214 | 213 | 213 | 218 | 213 | 95 | cc12.3 fab heavy chain | cc12.3 fab light chain | homo sapiens | homo sapiens | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 59 | 23 | 0.82 | HL | train |
9cpy_H_L | 9cpy | crystal structure of sars-cov-2 receptor binding domain in complex with antibodies c11-0860 and cc12.3 | no | viral protein/immune system | 2024-07-18 | 2025-06-25 | x-ray diffraction | 3.1 | 0.25 | 0.194 | 40674170 | 10.1084/jem.20241563 | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGKV4 | H | L | EVQLVQSGAEVKKPGESLKISCKGSGYIFITYWIGWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCAGSSGIFTPMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWTSTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYSSTPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGAEVKKPGESLKISCKGSGYIFITYWIGWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCAGSSGIFTPMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWTSTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYSSTPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.188309 | 23.400772 | 222 | 220 | 219 | 217 | 219 | 217 | 102 | c11-0860 fab heavy chain | c11-0860 fab light chain | mus musculus | mus musculus | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 54 | 24 | 0.86 | HL | train |
9g6v_A | 9g6v | dissociated fmdv sat2 pentamer in complex with ultralong fab117 | no | virus like particle | 2024-07-19 | 2024-10-30 | electron microscopy | 2.9 | N.A. | N.A. | 39422666 | 10.1099/jgv.0.002032 | 0 | auth_asym_id | VH- | N.A. | N.A. | A | N.A. | MGILPSPGMPALLSLVSLLSVLLMGCVAQVQLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGSVDSGGNTGYNPGLKSRLSITKDNSKSQVSLSVSSVTTEDSATYYCTTVLQQTTKKENNCPDGYSCGYRCRSGWGCSGDECCGRRGGGWGSIELIACCSSTYIHEFHVDAWGQGLLVTVSSASTTAPKVYPLSSCCGDKSSSTVTLGCLVSSYMPEPVTVTWNSGALKSGVHTFPAVLQSSGLYSLSSMVTVPGSTSGTQTFTCNVAHPASSTKVDKAVDPRCGKHHHHHH | N.A. | ENNCPDGYSCGYRCRSGWGCSGDECCGRRGGGWGSIELIACCSS | N.A. | 10.374277 | 0 | 308 | 0 | 44 | 0 | 44 | 0 | 0 | fab117 heavy chain | N.A. | bos taurus | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9g6v_E | 9g6v | dissociated fmdv sat2 pentamer in complex with ultralong fab117 | no | virus like particle | 2024-07-19 | 2024-10-30 | electron microscopy | 2.9 | N.A. | N.A. | 39422666 | 10.1099/jgv.0.002032 | 0 | auth_asym_id | VH- | N.A. | N.A. | E | N.A. | MGILPSPGMPALLSLVSLLSVLLMGCVAQVQLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGSVDSGGNTGYNPGLKSRLSITKDNSKSQVSLSVSSVTTEDSATYYCTTVLQQTTKKENNCPDGYSCGYRCRSGWGCSGDECCGRRGGGWGSIELIACCSSTYIHEFHVDAWGQGLLVTVSSASTTAPKVYPLSSCCGDKSSSTVTLGCLVSSYMPEPVTVTWNSGALKSGVHTFPAVLQSSGLYSLSSMVTVPGSTSGTQTFTCNVAHPASSTKVDKAVDPRCGKHHHHHH | N.A. | ENNCPDGYSCGYRCRSGWGCSGDECCGRRGGGWGSIELIACCSS | N.A. | 10.359285 | 0 | 308 | 0 | 44 | 0 | 44 | 0 | 0 | fab117 heavy chain | N.A. | bos taurus | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9g6v_I | 9g6v | dissociated fmdv sat2 pentamer in complex with ultralong fab117 | no | virus like particle | 2024-07-19 | 2024-10-30 | electron microscopy | 2.9 | N.A. | N.A. | 39422666 | 10.1099/jgv.0.002032 | 0 | auth_asym_id | VH- | N.A. | N.A. | I | N.A. | MGILPSPGMPALLSLVSLLSVLLMGCVAQVQLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGSVDSGGNTGYNPGLKSRLSITKDNSKSQVSLSVSSVTTEDSATYYCTTVLQQTTKKENNCPDGYSCGYRCRSGWGCSGDECCGRRGGGWGSIELIACCSSTYIHEFHVDAWGQGLLVTVSSASTTAPKVYPLSSCCGDKSSSTVTLGCLVSSYMPEPVTVTWNSGALKSGVHTFPAVLQSSGLYSLSSMVTVPGSTSGTQTFTCNVAHPASSTKVDKAVDPRCGKHHHHHH | N.A. | ENNCPDGYSCGYRCRSGWGCSGDECCGRRGGGWGSIELIACCSS | N.A. | 10.356857 | 0 | 308 | 0 | 44 | 0 | 44 | 0 | 0 | fab117 heavy chain | N.A. | bos taurus | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9g6v_M | 9g6v | dissociated fmdv sat2 pentamer in complex with ultralong fab117 | no | virus like particle | 2024-07-19 | 2024-10-30 | electron microscopy | 2.9 | N.A. | N.A. | 39422666 | 10.1099/jgv.0.002032 | 0 | auth_asym_id | VH- | N.A. | N.A. | M | N.A. | MGILPSPGMPALLSLVSLLSVLLMGCVAQVQLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGSVDSGGNTGYNPGLKSRLSITKDNSKSQVSLSVSSVTTEDSATYYCTTVLQQTTKKENNCPDGYSCGYRCRSGWGCSGDECCGRRGGGWGSIELIACCSSTYIHEFHVDAWGQGLLVTVSSASTTAPKVYPLSSCCGDKSSSTVTLGCLVSSYMPEPVTVTWNSGALKSGVHTFPAVLQSSGLYSLSSMVTVPGSTSGTQTFTCNVAHPASSTKVDKAVDPRCGKHHHHHH | N.A. | ENNCPDGYSCGYRCRSGWGCSGDECCGRRGGGWGSIELIACCSS | N.A. | 10.36094 | 0 | 308 | 0 | 44 | 0 | 44 | 0 | 0 | fab117 heavy chain | N.A. | bos taurus | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9g6v_Q | 9g6v | dissociated fmdv sat2 pentamer in complex with ultralong fab117 | no | virus like particle | 2024-07-19 | 2024-10-30 | electron microscopy | 2.9 | N.A. | N.A. | 39422666 | 10.1099/jgv.0.002032 | 0 | auth_asym_id | VH- | N.A. | N.A. | Q | N.A. | MGILPSPGMPALLSLVSLLSVLLMGCVAQVQLRESGPSLVKPSQTLSLTCTASGFSLSDKAVGWVRQAPGKALEWLGSVDSGGNTGYNPGLKSRLSITKDNSKSQVSLSVSSVTTEDSATYYCTTVLQQTTKKENNCPDGYSCGYRCRSGWGCSGDECCGRRGGGWGSIELIACCSSTYIHEFHVDAWGQGLLVTVSSASTTAPKVYPLSSCCGDKSSSTVTLGCLVSSYMPEPVTVTWNSGALKSGVHTFPAVLQSSGLYSLSSMVTVPGSTSGTQTFTCNVAHPASSTKVDKAVDPRCGKHHHHHH | N.A. | ENNCPDGYSCGYRCRSGWGCSGDECCGRRGGGWGSIELIACCSS | N.A. | 10.355568 | 0 | 308 | 0 | 44 | 0 | 44 | 0 | 0 | fab117 heavy chain | N.A. | bos taurus | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9cq7_H_I | 9cq7 | g115 tcr extracellular domain bound to fab 1 | no | membrane protein/immune system | 2024-07-19 | 2025-01-15 | electron microscopy | 3.21 | N.A. | N.A. | 39747888 | 10.1038/s41467-024-55467-5 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | H | I | QVQLQQPGAELVKPGASVKLSCKASGYTFTNHWISWVKQRPGQGLEWIGNIFPGSSSPNYNEKFKSKATLTVDTSSSTAYMQLSSLTSDASAVYYCTRWGNYGYYYAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCG | QIVLTQSPAIMSASLGEEITLTCSASSRVNYMHWYQQKSGTSPKLLIYSTSNLASGVPSRFSGSGSGTFYSLTIISVEAEDAADYYCHQWSSYPTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRGEC | QVQLQQPGAELVKPGASVKLSCKASGYTFTNHWISWVKQRPGQGLEWIGNIFPGSSSPNYNEKFKSKATLTVDTSSSTAYMQLSSLTSDASAVYYCTRWGNYGYYYAMDYWGQGTSVTV | QIVLTQSPAIMSASLGEEITLTCSASSRVNYMHWYQQKSGTSPKLLIYSTSNLASGVPSRFSGSGSGTFYSLTIISVEAEDAADYYCHQWSSYPTFGGGTKLEI | 13.898465 | 13.054207 | 224 | 212 | 119 | 104 | 119 | 104 | 40 | anti tcr variable delta 2 fab heavy chain | anti tcr variable delta 2 fab light chain | mus musculus | mus musculus | D | protein | g115 tcr delta chain | homo sapiens | 32 | 15 | 0.94 | HL | train |
9cql_C_D | 9cql | dimeric 9c2 gamma delta tcr bound by fab 3 | no | membrane protein | 2024-07-19 | 2025-01-15 | electron microscopy | 3.46 | N.A. | N.A. | 39747888 | 10.1038/s41467-024-55467-5 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV2 | C | D | QVQLQQPGADLVRPGTSVKLSCKASGYTFTSYWMHWVQQRPGQGLEWIGVIDPSDSYTNYNQKFKGKATLTVDTSSSTAYMQLSSLTSEDSAVYYCARSDDYDEGYFFDQWGQGTTLTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCG | DVVMTQTPLTLSVTVGQPASISCKSSQSLLHSNGKTYLNWLLQRPGQSPKLLIYLVSKVESGVPDRFSGSGSGTDFTLKISRVEAEDLGLYYCLQVTHFPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRGEC | QVQLQQPGADLVRPGTSVKLSCKASGYTFTSYWMHWVQQRPGQGLEWIGVIDPSDSYTNYNQKFKGKATLTVDTSSSTAYMQLSSLTSEDSAVYYCARSDDYDEGYFFDQWGQGTTLTV | DVVMTQTPLTLSVTVGQPASISCKSSQSLLHSNGKTYLNWLLQRPGQSPKLLIYLVSKVESGVPDRFSGSGSGTDFTLKISRVEAEDLGLYYCLQVTHFPLTFGAGTKLELK | 13.883537 | 13.7167 | 224 | 219 | 119 | 112 | 119 | 112 | 46 | anti tcr variable delta 1 fab heavy chain fab 3 | anti tcr variable delta 1 fab light chain fab 3 | mus musculus | mus musculus | A | protein | 9c2 tcr delta chain | homo sapiens | 39 | 18 | 0.82 | HL | train |
9cql_J_K | 9cql | dimeric 9c2 gamma delta tcr bound by fab 3 | no | membrane protein | 2024-07-19 | 2025-01-15 | electron microscopy | 3.46 | N.A. | N.A. | 39747888 | 10.1038/s41467-024-55467-5 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV2 | J | K | QVQLQQPGADLVRPGTSVKLSCKASGYTFTSYWMHWVQQRPGQGLEWIGVIDPSDSYTNYNQKFKGKATLTVDTSSSTAYMQLSSLTSEDSAVYYCARSDDYDEGYFFDQWGQGTTLTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCG | DVVMTQTPLTLSVTVGQPASISCKSSQSLLHSNGKTYLNWLLQRPGQSPKLLIYLVSKVESGVPDRFSGSGSGTDFTLKISRVEAEDLGLYYCLQVTHFPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRGEC | QVQLQQPGADLVRPGTSVKLSCKASGYTFTSYWMHWVQQRPGQGLEWIGVIDPSDSYTNYNQKFKGKATLTVDTSSSTAYMQLSSLTSEDSAVYYCARSDDYDEGYFFDQWGQGTTLTV | DVVMTQTPLTLSVTVGQPASISCKSSQSLLHSNGKTYLNWLLQRPGQSPKLLIYLVSKVESGVPDRFSGSGSGTDFTLKISRVEAEDLGLYYCLQVTHFPLTFGAGTKLELK | 13.883597 | 13.716935 | 224 | 219 | 119 | 112 | 119 | 112 | 46 | anti tcr variable delta 1 fab heavy chain fab 3 | anti tcr variable delta 1 fab light chain fab 3 | mus musculus | mus musculus | E | protein | 9c2 tcr delta chain | homo sapiens | 39 | 18 | 0.82 | HL | train |
9g6q_H_L | 9g6q | scfv ip11 in complex with rocuronium | no | immune system | 2024-07-19 | 2025-02-12 | x-ray diffraction | 1.2 | 0.189 | 0.168 | 39892658 | 10.1016/j.jaci.2025.01.025 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV2 | H | L | QVQLQQSGAELARPGASVKLSCKASGYTFTSYGITWVKQRPGQGLEWIGEIYPRSTYTSYNEKFKGKATLTADKSSSTAYMELRSLTSEDSAVYFCARAGNWGGENFFDYWGQGTTLTVSS | GTGGSGGGGSGGGGSGGGASDIVITQDELSNPVTSGESVSISCRSSKSLLYKDGKTYLNWFLQRPGQSPQLLIYLMSTRASGVSDRFSGSGSGTDFTLEIRRVKAEDVGVYYCQQLVEYPYTFGGGTKLEIK | QVQLQQSGAELARPGASVKLSCKASGYTFTSYGITWVKQRPGQGLEWIGEIYPRSTYTSYNEKFKGKATLTADKSSSTAYMELRSLTSEDSAVYFCARAGNWGGENFFDYWGQGTTLTVS | GASDIVITQDELSNPVTSGESVSISCRSSKSLLYKDGKTYLNWFLQRPGQSPQLLIYLMSTRASGVSDRFSGSGSGTDFTLEIRRVKAEDVGVYYCQQLVEYPYTFGGGTKLEIK | 13.830345 | 13.870794 | 121 | 132 | 120 | 113 | 120 | 115 | 45 | scfv-ip11 | scfv-ip11 | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9g6r_H_L | 9g6r | fab-ip8 in complex with rocuronium | no | immune system | 2024-07-19 | 2025-02-12 | x-ray diffraction | 1.72 | 0.203 | 0.162 | 39892658 | 10.1016/j.jaci.2025.01.025 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV2 | H | L | QVQLQQSGAELAKPGASVKLSCKASGYTFTSNWMHWVKQRPGQGLEWIGYINPSSGYSKYNQKFKDKATLTADKSSSTAYMQLSSLTYEDSAVYFCARLSYYDYDGGYFFDFWGQGTTLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | DIVITQDELSSPVTSGESVSISCRSSKSLLYKDGKTYLNWFLQRPGQSPQILIYLMSTRASGVSDRFSGSGSGTDFTLEISRVKAEDVGVYYCQQVVEYPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | VQLQQSGAELAKPGASVKLSCKASGYTFTSNWMHWVKQRPGQGLEWIGYINPSSGYSKYNQKFKDKATLTADKSSSTAYMQLSSLTYEDSAVYFCARLSYYDYDGGYFFDFWGQGTTLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | DIVITQDELSSPVTSGESVSISCRSSKSLLYKDGKTYLNWFLQRPGQSPQILIYLMSTRASGVSDRFSGSGSGTDFTLEISRVKAEDVGVYYCQQVVEYPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 20.679176 | 23.907846 | 223 | 218 | 222 | 218 | 222 | 218 | 100 | fab-ip8 heavy chain | fab-ip8 light chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9g6s_H_L | 9g6s | fab-ip2 in complex with rocuronium | no | immune system | 2024-07-19 | 2025-02-12 | x-ray diffraction | 2.37 | 0.253 | 0.208 | 39892658 | 10.1016/j.jaci.2025.01.025 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | H | L | QVQLQQSGAELVRPGASVKMSCKASGYTFTSYWITWVKQRPGQGLEWIGDIYPGSGSSNYNEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYCARLGSRHYFDYWGQGTTLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | QIVLTQSPALMSASPGEKVTMTCSASSSVSYMYWYQQKPGSPPKSWIYLTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCQQWSPNPPITFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQQSGAELVRPGASVKMSCKASGYTFTSYWITWVKQRPGQGLEWIGDIYPGSGSSNYNEKFKSKATLTVDTSSSTAYMQLSSLTSEDSAVYYCARLGSRHYFDYWGQGTTLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | QIVLTQSPALMSASPGEKVTMTCSASSSVSYMYWYQQKPGSPPKSWIYLTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCQQWSPNPPITFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 21.211195 | 23.00183 | 218 | 214 | 209 | 211 | 218 | 211 | 90 | fab-ip2 h chain | fab-ip2 l chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9cqa_E_F | 9cqa | structure of antibody 1g1 bound to the central conserved region of rsv g | no | viral protein/immune system | 2024-07-19 | 2025-02-19 | x-ray diffraction | 1.74 | 0.225 | 0.211 | 40082629 | 10.1038/s41598-025-92886-w | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGLV3 | E | F | QVHLVQSGVEVKKPGASVRVSCKASGYTFATYGITWVRQAPGRGLEWVGWITPYNDRTSYAQIFHGRVTMTTDTSTNTAYMELRSLRSDDTAMYYCARNHCNFYHDFWSGLDYWGQGTLVSVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCASLVPRGSGWSHPQFEKGGGSGGGSGGGSWSHPQFEK | SFELTQPPSVSVSPGQTARITCSGDALPKQYVYWYQQKPGQAPVLVIYKTTERPSGIPERFSDSSSGTTVTLTISAAQAEDEADYYCQSVDSSGTYVFGIGTKVTVLGRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVHLVQSGVEVKKPGASVRVSCKASGYTFATYGITWVRQAPGRGLEWVGWITPYNDRTSYAQIFHGRVTMTTDTSTNTAYMELRSLRSDDTAMYYCARNHCNFYHDFWSGLDYWGQGTLVSVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | SFELTQPPSVSVSPGQTARITCSGDALPKQYVYWYQQKPGQAPVLVIYKTTERPSGIPERFSDSSSGTTVTLTISAAQAEDEADYYCQSVDSSGTYVFGIGTKVTVLGRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 22.80311 | 23.351599 | 264 | 215 | 217 | 213 | 224 | 213 | 97 | fab 1g1 heavy chain | fab1g1 light chain | homo sapiens | homo sapiens | A | peptide | mature secreted glycoprotein g | respiratory syncytial virus a2 | 48 | 23 | 0.77 | HL | train |
9cqa_D_G | 9cqa | structure of antibody 1g1 bound to the central conserved region of rsv g | no | viral protein/immune system | 2024-07-19 | 2025-02-19 | x-ray diffraction | 1.74 | 0.225 | 0.211 | 40082629 | 10.1038/s41598-025-92886-w | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGLV3 | D | G | QVHLVQSGVEVKKPGASVRVSCKASGYTFATYGITWVRQAPGRGLEWVGWITPYNDRTSYAQIFHGRVTMTTDTSTNTAYMELRSLRSDDTAMYYCARNHCNFYHDFWSGLDYWGQGTLVSVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCASLVPRGSGWSHPQFEKGGGSGGGSGGGSWSHPQFEK | SFELTQPPSVSVSPGQTARITCSGDALPKQYVYWYQQKPGQAPVLVIYKTTERPSGIPERFSDSSSGTTVTLTISAAQAEDEADYYCQSVDSSGTYVFGIGTKVTVLGRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVHLVQSGVEVKKPGASVRVSCKASGYTFATYGITWVRQAPGRGLEWVGWITPYNDRTSYAQIFHGRVTMTTDTSTNTAYMELRSLRSDDTAMYYCARNHCNFYHDFWSGLDYWGQGTLVSVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | SFELTQPPSVSVSPGQTARITCSGDALPKQYVYWYQQKPGQAPVLVIYKTTERPSGIPERFSDSSSGTTVTLTISAAQAEDEADYYCQSVDSSGTYVFGIGTKVTVLGRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 22.734146 | 22.960493 | 264 | 215 | 217 | 213 | 224 | 213 | 96 | fab 1g1 heavy chain | fab1g1 light chain | homo sapiens | homo sapiens | B | peptide | mature secreted glycoprotein g | respiratory syncytial virus a2 | 47 | 23 | 0.79 | HL | train |
9cqb_B_A | 9cqb | antibody 1g8 bound to the central conserved domain of rsv g | no | viral protein/immune system | 2024-07-19 | 2025-02-19 | x-ray diffraction | 2.5 | 0.263 | 0.226 | 40082629 | 10.1038/s41598-025-92886-w | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV3 | B | A | QLQLQESGPGLVKPSETLSLTCTVSGDSITSGQYYWAWIRQAPGKGLEWIGSIHYSGSTYQNPSLKSRLTISVDTSRDQISMKLSSVTVAESAVYYCAKQQLSLSPVENWFDPWGQGTLVTVSSASASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCASLVPRGSGWSHPQFEKGGGSGGGSGGGSWSHPQFEK | EIVVTQSPVTLSVSPGESAALSCRASRSVGSRLAWYQQKPGQPPRLLIFAASTRESGIPARFSGSGSGTDFTLIISGLQSEDYAVYYCQQYKEWPLFTFGPGTTVDSKRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QLQLQESGPGLVKPSETLSLTCTVSGDSITSGQYYWAWIRQAPGKGLEWIGSIHYSGSTYQNPSLKSRLTISVDTSRDQISMKLSSVTVAESAVYYCAKQQLSLSPVENWFDPWGQGTLVTVSSASASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | EIVVTQSPVTLSVSPGESAALSCRASRSVGSRLAWYQQKPGQPPRLLIFAASTRESGIPARFSGSGSGTDFTLIISGLQSEDYAVYYCQQYKEWPLFTFGPGTTVDSKRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.435738 | 22.010014 | 266 | 216 | 225 | 216 | 228 | 216 | 96 | fab 1g8 heavy chain | fab 1g8 light chain | homo sapiens | homo sapiens | D | peptide | mature secreted glycoprotein g | respiratory syncytial virus a2 | 40 | 16 | 0.76 | HL | train |
9iv1_S | 9iv1 | identification, structure and agonist design of an androgen membrane receptor. | no | membrane protein | 2024-07-22 | 2025-02-12 | electron microscopy | 2.98 | N.A. | N.A. | 39884271 | 10.1016/j.cell.2025.01.006 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | MVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELLEENLYFQGASHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.350195 | 0 | 267 | 0 | 231 | 0 | 247 | 0 | 0 | scfv16 | N.A. | synthetic construct | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(s) subunit alpha isoforms short | homo sapiens;homo sapiens | 23;30 | 9;17 | 0.82;0.89 | H_only | train |
9iut_A_B | 9iut | crystal structure of cancer-specific anti-her2 antibody h2mab-250 in complex with epitope peptide | no | immune system | 2024-07-22 | 2025-06-04 | x-ray diffraction | 2.09 | 0.236 | 0.201 | 40472844 | 10.1016/j.stem.2025.05.007 | 0 | auth_asym_id | VH+:VL+ | IGHV3 | IGKV2 | A | B | GREVQLVESGGGLVQPGGSLKLSCAASGFTFSNYGMSWVRQTPDRRLELVATINNNGGGTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTSPGLLWDAWGAGTTVTVCSGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIEAK | GRDVVMTQTPLTLSVSIGQPASISCKSSQSLLDSDGRTYLNWLLQRPGQSPKRLIYLVSKLDSGAPDRFTGSGSGTDFTLKISRVEAEDLGVYYCWQGTHFPQTFGGGTKLEIKRGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQCKRQPILDAIEAKGTLLG | GREVQLVESGGGLVQPGGSLKLSCAASGFTFSNYGMSWVRQTPDRRLELVATINNNGGGTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTSPGLLWDAWGAGTTVTVCSGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIE | RDVVMTQTPLTLSVSIGQPASISCKSSQSLLDSDGRTYLNWLLQRPGQSPKRLIYLVSKLDSGAPDRFTGSGSGTDFTLKISRVEAEDLGVYYCWQGTHFPQTFGGGTKLEIKRGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQCKRQPILDAIEAKGTLLG | 20.848263 | 21.631416 | 169 | 171 | 167 | 164 | 167 | 170 | 110 | h2mab-250 vh(s112c)-sarah | h2mab-250 vl-sarah(s37c) | mus musculus | mus musculus | C | peptide | h2mab-250 epitope peptide | homo sapiens | 37 | 23 | 0.79 | HL | train |
9iut_D_E | 9iut | crystal structure of cancer-specific anti-her2 antibody h2mab-250 in complex with epitope peptide | no | immune system | 2024-07-22 | 2025-06-04 | x-ray diffraction | 2.09 | 0.236 | 0.201 | 40472844 | 10.1016/j.stem.2025.05.007 | 0 | auth_asym_id | VH+:VL+ | IGHV3 | IGKV2 | D | E | GREVQLVESGGGLVQPGGSLKLSCAASGFTFSNYGMSWVRQTPDRRLELVATINNNGGGTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTSPGLLWDAWGAGTTVTVCSGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIEAK | GRDVVMTQTPLTLSVSIGQPASISCKSSQSLLDSDGRTYLNWLLQRPGQSPKRLIYLVSKLDSGAPDRFTGSGSGTDFTLKISRVEAEDLGVYYCWQGTHFPQTFGGGTKLEIKRGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQCKRQPILDAIEAKGTLLG | REVQLVESGGGLVQPGGSLKLSCAASGFTFSNYGMSWVRQTPDRRLELVATINNNGGGTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTSPGLLWDAWGAGTTVTVCSGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIE | DVVMTQTPLTLSVSIGQPASISCKSSQSLLDSDGRTYLNWLLQRPGQSPKRLIYLVSKLDSGAPDRFTGSGSGTDFTLKISRVEAEDLGVYYCWQGTHFPQTFGGGTKLEIKRGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQCKRQPILDAIEAK | 20.812037 | 20.30704 | 169 | 171 | 166 | 159 | 166 | 164 | 111 | h2mab-250 vh(s112c)-sarah | h2mab-250 vl-sarah(s37c) | mus musculus | mus musculus | F | peptide | h2mab-250 epitope peptide | homo sapiens | 36 | 22 | 0.79 | HL | train |
9ivk_H_L | 9ivk | cryo-em structure of a tmfap | no | membrane protein/immune system | 2024-07-23 | 2024-11-20 | electron microscopy | 2.74 | N.A. | N.A. | 39972138 | 10.1038/s41586-025-08598-8 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | SEVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVT | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEI | 13.955718 | 13.155126 | 229 | 214 | 122 | 107 | 122 | 107 | 50 | heavy chain, fab fragment | light chain, fab fragment | homo sapiens | homo sapiens | A | protein | hbc599 membrane protein binder | artificial sequences | 40 | 19 | 0.9 | HL | train |
9csb_J_I | 9csb | native human gabaa receptor of beta3-alpha1-beta2-alpha2-gamma2 assembly | no | membrane protein | 2024-07-23 | 2025-01-22 | electron microscopy | 3.34 | N.A. | N.A. | 39843743 | 10.1038/s41586-024-08454-1 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | J | I | EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMYWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITTDTFSNTAYLQLSSLTSEDTAVYYCARKGLRWAMDYWGQGTSVTVSTAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPSGPISTINPCPPCKECHKCPAPNLEGGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDW... | NIVMTQSPKSMSMSVGERVTLSCKASEYVGTYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFTGSGSATDFTLTIGSVQAEDLADYHCGQSYSYPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | VQLQQSGAELVKPGASVKLSCTASGFNIKDTYMYWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITTDTFSNTAYLQLSSLTSEDTAVYYCARKGLRWAMDYWGQGTSVTVS | NIVMTQSPKSMSMSVGERVTLSCKASEYVGTYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFTGSGSATDFTLTIGSVQAEDLADYHCGQSYSYPTFGAGTKLEL | 13.821829 | 13.326287 | 454 | 213 | 116 | 105 | 116 | 105 | 43 | igg2b fab_1f4 heavy chain | kappa fab_1f4 light chain | mus musculus | mus musculus | B | protein | gamma-aminobutyric acid receptor subunit alpha-1 | homo sapiens | 42 | 16 | 0.84 | HL | train |
9ivm_N | 9ivm | cryo-em structure of the glp-1(9-36)-bound human glp-1r-gs complex in the presence of lsn3318839 | no | membrane protein | 2024-07-24 | 2024-11-13 | electron microscopy | 3.22 | N.A. | N.A. | 39664415 | 10.1016/j.apsb.2024.09.002 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | 13.623861 | 0 | 140 | 0 | 126 | 0 | 126 | 0 | 0 | nanobody-35 | N.A. | homo sapiens | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1,guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 42;33 | 13;11 | 0.59;0.65 | H_only | train |
9ct0_J_I | 9ct0 | native human gabaa receptor of beta2-alpha1-beta2-alpha2-gamma2 assembly | no | membrane protein | 2024-07-24 | 2025-01-22 | electron microscopy | 3.19 | N.A. | N.A. | 39843743 | 10.1038/s41586-024-08454-1 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | J | I | EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMYWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITTDTFSNTAYLQLSSLTSEDTAVYYCARKGLRWAMDYWGQGTSVTVSTAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPSGPISTINPCPPCKECHKCPAPNLEGGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDW... | NIVMTQSPKSMSMSVGERVTLSCKASEYVGTYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFTGSGSATDFTLTIGSVQAEDLADYHCGQSYSYPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | VQLQQSGAELVKPGASVKLSCTASGFNIKDTYMYWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITTDTFSNTAYLQLSSLTSEDTAVYYCARKGLRWAMDYWGQGTSVTVS | NIVMTQSPKSMSMSVGERVTLSCKASEYVGTYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFTGSGSATDFTLTIGSVQAEDLADYHCGQSYSYPTFGAGTKLEL | 13.794544 | 13.290628 | 454 | 213 | 116 | 105 | 116 | 105 | 42 | igg2b fab_1f4 heavy chain | kappa fab_1f4 light chain | mus musculus | mus musculus | B | protein | gamma-aminobutyric acid receptor subunit alpha-1 | homo sapiens | 45 | 16 | 0.8 | HL | train |
9g97_B | 9g97 | lipid iii flippase wzxe with nb10 nanobody in outward-facing conformation at 0.9688 a | no | transport protein | 2024-07-24 | 2025-01-22 | x-ray diffraction | 2.31 | 0.26 | 0.214 | 39772807 | 10.1098/rsob.240310 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | MAQVQLVESGGGLVQAGGSLGLSCAASGRTFSNYVMAWFRQAPGKEREFVARISESRGTTDYADSVKGRFTISRDNAKNTIYLQMNSLNPGDTAVYSCAATLPAWTGIIGGRRPGNYPYWGQGTQVTVSSHHHHHHEPEA | N.A. | QLVESGGGLVQAGGSLGLSCAASGRTFSNYVMAWFRQAPGKEREFVARISESRGTTDYADSVKGRFTISRDNAKNTIYLQMNSLNPGDTAVYSCAATLPAWTGIIGGRRPGNYPYWGQGTQVTVS | N.A. | 13.586685 | 0 | 140 | 0 | 125 | 0 | 125 | 0 | 0 | nb10 nanobody | N.A. | lama glama | N.A. | A | protein | lipid iii flippase | escherichia coli | 36 | 13 | 0.76 | H_only | train |
9ctu_D_C | 9ctu | cryo-em structure of sars-cov-2 m (short conformation)bound to c1p | no | membrane protein | 2024-07-25 | 2024-11-06 | electron microscopy | 3.03 | N.A. | N.A. | 39574576 | 10.1101/2024.11.04.620124 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV7 | D | C | MKHLWFFLLLVAAPRWVLSEVQLQQSGPELVKPGASMKISCKTSGYSFTGYTMNWVKQSHGKNLEWIGLINPYNGDTSYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCEVINTYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSHHHHHHH | MVLQTQVFISLLLWISGAYGDIVMTQSPASLAVSLGQRATISCKASQSIDYDGDNYMNWYQQKPGQPPKLLIYTTSNLESGIPARFSGSGSGTDFTLNIHPVEEGDAATYYCQQNNEDPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVQLQQSGPELVKPGASMKISCKTSGYSFTGYTMNWVKQSHGKNLEWIGLINPYNGDTSYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCEVINTYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR | DIVMTQSPASLAVSLGQRATISCKASQSIDYDGDNYMNWYQQKPGQPPKLLIYTTSNLESGIPARFSGSGSGTDFTLNIHPVEEGDAATYYCQQNNEDPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | 21.083246 | 23.470839 | 255 | 238 | 213 | 218 | 213 | 218 | 93 | short conformation fab heavy chain | short conformation fab light chain | mus musculus | mus musculus | A;B | protein;protein | membrane protein;membrane protein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 61;11 | 23;5 | 0.66;1.0 | HL | train |
9ctu_F_E | 9ctu | cryo-em structure of sars-cov-2 m (short conformation)bound to c1p | no | membrane protein | 2024-07-25 | 2024-11-06 | electron microscopy | 3.03 | N.A. | N.A. | 39574576 | 10.1101/2024.11.04.620124 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV7 | F | E | MKHLWFFLLLVAAPRWVLSEVQLQQSGPELVKPGASMKISCKTSGYSFTGYTMNWVKQSHGKNLEWIGLINPYNGDTSYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCEVINTYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSHHHHHHH | MVLQTQVFISLLLWISGAYGDIVMTQSPASLAVSLGQRATISCKASQSIDYDGDNYMNWYQQKPGQPPKLLIYTTSNLESGIPARFSGSGSGTDFTLNIHPVEEGDAATYYCQQNNEDPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVQLQQSGPELVKPGASMKISCKTSGYSFTGYTMNWVKQSHGKNLEWIGLINPYNGDTSYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCEVINTYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR | DIVMTQSPASLAVSLGQRATISCKASQSIDYDGDNYMNWYQQKPGQPPKLLIYTTSNLESGIPARFSGSGSGTDFTLNIHPVEEGDAATYYCQQNNEDPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | 21.062983 | 23.521845 | 255 | 238 | 213 | 218 | 213 | 218 | 80 | short conformation fab heavy chain | short conformation fab light chain | mus musculus | mus musculus | A;B | protein;protein | membrane protein;membrane protein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 11;62 | 6;24 | 1.0;0.67 | HL | train |
9ctw_D_C | 9ctw | cryo-em structure of sars-cov-2 m (long conformation) in the presence of c1p | no | membrane protein | 2024-07-25 | 2024-11-06 | electron microscopy | 3.01 | N.A. | N.A. | 39574576 | 10.1101/2024.11.04.620124 | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGKV7 | D | C | MKHLWFFLLLVAAPRWVLSEVQLQQSGAELVRPGSSVKISCKGSGYVFSNYWMNWVKQRPGQGLEWIGQIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCASGYLGENYVMDFWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSHHHHHHH | MVLQTQVFISLLLWISGAYGDIVLTQSPASLTVSLGQRATISCRASESVDSFGNSFMHWYQQKPGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYYCQQSSEDPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVQLQQSGAELVRPGSSVKISCKGSGYVFSNYWMNWVKQRPGQGLEWIGQIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCASGYLGENYVMDFWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR | DIVLTQSPASLTVSLGQRATISCRASESVDSFGNSFMHWYQQKPGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYYCQQSSEDPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | 22.118465 | 24.25778 | 262 | 238 | 220 | 218 | 220 | 218 | 92 | long conformation fab heavy chain | long conformation fab light chain | mus musculus | mus musculus | A;B | protein;protein | membrane protein;membrane protein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 32;18 | 15;9 | 0.88;0.9 | HL | train |
9ctw_F_E | 9ctw | cryo-em structure of sars-cov-2 m (long conformation) in the presence of c1p | no | membrane protein | 2024-07-25 | 2024-11-06 | electron microscopy | 3.01 | N.A. | N.A. | 39574576 | 10.1101/2024.11.04.620124 | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGKV7 | F | E | MKHLWFFLLLVAAPRWVLSEVQLQQSGAELVRPGSSVKISCKGSGYVFSNYWMNWVKQRPGQGLEWIGQIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCASGYLGENYVMDFWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSHHHHHHH | MVLQTQVFISLLLWISGAYGDIVLTQSPASLTVSLGQRATISCRASESVDSFGNSFMHWYQQKPGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYYCQQSSEDPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVQLQQSGAELVRPGSSVKISCKGSGYVFSNYWMNWVKQRPGQGLEWIGQIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCASGYLGENYVMDFWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR | DIVLTQSPASLTVSLGQRATISCRASESVDSFGNSFMHWYQQKPGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYYCQQSSEDPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | 22.120691 | 24.248917 | 262 | 238 | 220 | 218 | 220 | 218 | 91 | long conformation fab heavy chain | long conformation fab light chain | mus musculus | mus musculus | A;B | protein;protein | membrane protein;membrane protein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 18;30 | 9;15 | 0.9;0.88 | HL | train |
9ctj_J_I | 9ctj | native human gabaa receptor of beta2-alpha1-beta3-alpha2-gamma2 assembly | no | membrane protein | 2024-07-25 | 2025-01-22 | electron microscopy | 3.74 | N.A. | N.A. | 39843743 | 10.1038/s41586-024-08454-1 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | J | I | EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMYWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITTDTFSNTAYLQLSSLTSEDTAVYYCARKGLRWAMDYWGQGTSVTVSTAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPSGPISTINPCPPCKECHKCPAPNLEGGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDW... | NIVMTQSPKSMSMSVGERVTLSCKASEYVGTYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFTGSGSATDFTLTIGSVQAEDLADYHCGQSYSYPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | VQLQQSGAELVKPGASVKLSCTASGFNIKDTYMYWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITTDTFSNTAYLQLSSLTSEDTAVYYCARKGLRWAMDYWGQGTSVTVS | NIVMTQSPKSMSMSVGERVTLSCKASEYVGTYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFTGSGSATDFTLTIGSVQAEDLADYHCGQSYSYPTFGAGTKLEL | 13.798743 | 13.285836 | 454 | 213 | 116 | 105 | 116 | 105 | 46 | igg2b fab_1f4 heavy chain | kappa fab_1f4 light chain | mus musculus | mus musculus | B | protein | gamma-aminobutyric acid receptor subunit alpha-1 | homo sapiens | 44 | 16 | 0.8 | HL | train |
9ctp_J_I | 9ctp | native human gabaa receptor of beta2-alpha1-beta2-alpha3-gamma2 assembly | no | membrane protein | 2024-07-25 | 2025-01-22 | electron microscopy | 3.62 | N.A. | N.A. | 39843743 | 10.1038/s41586-024-08454-1 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | J | I | EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMYWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITTDTFSNTAYLQLSSLTSEDTAVYYCARKGLRWAMDYWGQGTSVTVSTAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPSGPISTINPCPPCKECHKCPAPNLEGGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDW... | NIVMTQSPKSMSMSVGERVTLSCKASEYVGTYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFTGSGSATDFTLTIGSVQAEDLADYHCGQSYSYPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | VQLQQSGAELVKPGASVKLSCTASGFNIKDTYMYWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITTDTFSNTAYLQLSSLTSEDTAVYYCARKGLRWAMDYWGQGTSVTVS | NIVMTQSPKSMSMSVGERVTLSCKASEYVGTYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFTGSGSATDFTLTIGSVQAEDLADYHCGQSYSYPTFGAGTKLEL | 13.816202 | 13.255232 | 454 | 213 | 116 | 105 | 116 | 105 | 44 | igg2b fab_1f4 heavy chain | kappa fab_1f4 light chain | mus musculus | mus musculus | B | protein | gamma-aminobutyric acid receptor subunit alpha-1 | homo sapiens | 41 | 17 | 0.85 | HL | train |
9g9m_B | 9g9m | lipid iii flippase wzxe with nb10 and nb7 nanobodies in outward-facing conformation - crystal 1 | no | transport protein | 2024-07-25 | 2025-01-22 | x-ray diffraction | 2.55 | 0.287 | 0.235 | 39772807 | 10.1098/rsob.240310 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | MAQVQLVESGGGLVQAGGSLGLSCAASGRTFSNYVMAWFRQAPGKEREFVARISESRGTTDYADSVKGRFTISRDNAKNTIYLQMNSLNPGDTAVYSCAATLPAWTGIIGGRRPGNYPYWGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLVESGGGLVQAGGSLGLSCAASGRTFSNYVMAWFRQAPGKEREFVARISESRGTTDYADSVKGRFTISRDNAKNTIYLQMNSLNPGDTAVYSCAATLPAWTGIIGGRRPGNYPYWGQGTQVTVS | N.A. | 13.690494 | 0 | 140 | 0 | 127 | 0 | 127 | 0 | 0 | nb10 nanobody | N.A. | lama glama | N.A. | A | protein | lipid iii flippase | escherichia coli | 33 | 13 | 0.81 | H_only | train |
9g9m_C | 9g9m | lipid iii flippase wzxe with nb10 and nb7 nanobodies in outward-facing conformation - crystal 1 | no | transport protein | 2024-07-25 | 2025-01-22 | x-ray diffraction | 2.55 | 0.287 | 0.235 | 39772807 | 10.1098/rsob.240310 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | MAQVQLVESGGGLVQAGDSLTLSCAASGRTAYRYGMGWFRQHPGKEREFVASIWWTGTTTYYADSVKGRFTISRDDVKNMVYLQMNSLKPEDTAVYYCAAKFYGGNSKRPGDYAYWGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLVESGGGLVQAGDSLTLSCAASGRTAYRYGMGWFRQHPGKEREFVASIWWTGTTTYYADSVKGRFTISRDDVKNMVYLQMNSLKPEDTAVYYCAAKFYGGNSKRPGDYAYWGQGTQVTVSS | N.A. | 13.888706 | 0 | 136 | 0 | 124 | 0 | 124 | 0 | 0 | nb7 nanobody | N.A. | lama glama | N.A. | A | protein | lipid iii flippase | escherichia coli | 28 | 10 | 0.83 | H_only | train |
9g9p_B | 9g9p | lipid iii flippase wzxe with nb10 and nb7 nanobodies in inward-facing conformation - crystal 2 | no | transport protein | 2024-07-25 | 2025-01-22 | x-ray diffraction | 2.8 | 0.274 | 0.22 | 39772807 | 10.1098/rsob.240310 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | MAQVQLVESGGGLVQAGGSLGLSCAASGRTFSNYVMAWFRQAPGKEREFVARISESRGTTDYADSVKGRFTISRDNAKNTIYLQMNSLNPGDTAVYSCAATLPAWTGIIGGRRPGNYPYWGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLVESGGGLVQAGGSLGLSCAASGRTFSNYVMAWFRQAPGKEREFVARISESRGTTDYADSVKGRFTISRDNAKNTIYLQMNSLNPGDTAVYSCAATLPAWTGIIGGRRPGNYPYWGQGTQVTVSS | N.A. | 13.72079 | 0 | 140 | 0 | 128 | 0 | 128 | 0 | 0 | nb10 nanobody | N.A. | lama glama | N.A. | A | protein | lipid iii flippase | escherichia coli | 40 | 13 | 0.72 | H_only | train |
9g9p_C | 9g9p | lipid iii flippase wzxe with nb10 and nb7 nanobodies in inward-facing conformation - crystal 2 | no | transport protein | 2024-07-25 | 2025-01-22 | x-ray diffraction | 2.8 | 0.274 | 0.22 | 39772807 | 10.1098/rsob.240310 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | MAQVQLVESGGGLVQAGDSLTLSCAASGRTAYRYGMGWFRQHPGKEREFVASIWWTGTTTYYADSVKGRFTISRDDVKNMVYLQMNSLKPEDTAVYYCAAKFYGGNSKRPGDYAYWGQGTQVTVSSHHHHHHEPEA | N.A. | VQLVESGGGLVQAGDSLTLSCAASGRTAYRYGMGWFRQHPGKEREFVASIWWTGTTTYYADSVKGRFTISRDDVKNMVYLQMNSLKPEDTAVYYCAAKFYGGNSKRPGDYAYWGQGTQVTVSS | N.A. | 13.80987 | 0 | 136 | 0 | 123 | 0 | 123 | 0 | 0 | nb7 nanobody | N.A. | lama glama | N.A. | A | protein | lipid iii flippase | escherichia coli | 26 | 9 | 0.9 | H_only | train |
9cu5_D_E | 9cu5 | ljf-085 fab in complex with hiv env jrfl nfl td cc3+ trimer and 35o22 fab | yes | viral protein/immune system | 2024-07-25 | 2025-05-21 | electron microscopy | 3.4 | N.A. | N.A. | 40339576 | 10.1016/j.immuni.2025.04.010 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | D | E | QGQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSS | QSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQSK | GQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVS | SVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQS | 14.626075 | 13.785049 | 131 | 114 | 129 | 112 | 129 | 112 | 44 | 35o22 heavy chain fv | 35o22 light chain fv | homo sapiens | homo sapiens | A | protein | hiv env jrfl nfl td cc3+ gp140 | human immunodeficiency virus 1 | 40 | 13 | 0.65 | HL | train |
9cu5_H_L | 9cu5 | ljf-085 fab in complex with hiv env jrfl nfl td cc3+ trimer and 35o22 fab | yes | viral protein/immune system | 2024-07-25 | 2025-05-21 | electron microscopy | 3.4 | N.A. | N.A. | 40339576 | 10.1016/j.immuni.2025.04.010 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | H | L | QVQLQESGPGLVKPSETLSLTCTVSGGSIDDYFWNWVRQPPGKPLECIGYIFGRGGGTKYNPSLDNRVTISTDTPNQFSLKLRSVTVADTAIYYCARWNLYDDDFGYNSFAVWGRGVLVTVSS | DIQMTQSPSSLSASVGDTVTITCQARHAVGKNLNWYQQKPGRGPQLLIYMASSRHSGVPSRFRGSGSGREFTLTINNLQPEDFATYSCQQGYTYPWTFGQGTKVEMK | QVQLQESGPGLVKPSETLSLTCTVSGGSIDDYFWNWVRQPPGKPLECIGYIFGRGGGTKYNPSLDNRVTISTDTPNQFSLKLRSVTVADTAIYYCARWNLYDDDFGYNSFAVWGRGVLVTV | DIQMTQSPSSLSASVGDTVTITCQARHAVGKNLNWYQQKPGRGPQLLIYMASSRHSGVPSRFRGSGSGREFTLTINNLQPEDFATYSCQQGYTYPWTFGQGTKVEM | 13.998264 | 13.228129 | 123 | 107 | 121 | 106 | 121 | 106 | 50 | ljf-085 heavy chain fv | ljf-085 light chain fv | macaca mulatta | macaca mulatta | A;B | protein;protein | hiv env jrfl nfl td cc3+ gp140;hiv env jrfl nfl td cc3+ gp140 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 60;42 | 18;18 | 0.64;0.9 | HL | train |
9cu5_J_K | 9cu5 | ljf-085 fab in complex with hiv env jrfl nfl td cc3+ trimer and 35o22 fab | yes | viral protein/immune system | 2024-07-25 | 2025-05-21 | electron microscopy | 3.4 | N.A. | N.A. | 40339576 | 10.1016/j.immuni.2025.04.010 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | J | K | QGQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSS | QSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQSK | GQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVS | SVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQS | 14.713477 | 13.759436 | 131 | 114 | 129 | 112 | 129 | 112 | 41 | 35o22 heavy chain fv | 35o22 light chain fv | homo sapiens | homo sapiens | B | protein | hiv env jrfl nfl td cc3+ gp140 | human immunodeficiency virus 1 | 44 | 15 | 0.65 | HL | train |
9cu5_I_M | 9cu5 | ljf-085 fab in complex with hiv env jrfl nfl td cc3+ trimer and 35o22 fab | yes | viral protein/immune system | 2024-07-25 | 2025-05-21 | electron microscopy | 3.4 | N.A. | N.A. | 40339576 | 10.1016/j.immuni.2025.04.010 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | I | M | QVQLQESGPGLVKPSETLSLTCTVSGGSIDDYFWNWVRQPPGKPLECIGYIFGRGGGTKYNPSLDNRVTISTDTPNQFSLKLRSVTVADTAIYYCARWNLYDDDFGYNSFAVWGRGVLVTVSS | DIQMTQSPSSLSASVGDTVTITCQARHAVGKNLNWYQQKPGRGPQLLIYMASSRHSGVPSRFRGSGSGREFTLTINNLQPEDFATYSCQQGYTYPWTFGQGTKVEMK | QVQLQESGPGLVKPSETLSLTCTVSGGSIDDYFWNWVRQPPGKPLECIGYIFGRGGGTKYNPSLDNRVTISTDTPNQFSLKLRSVTVADTAIYYCARWNLYDDDFGYNSFAVWGRGVLVTV | DIQMTQSPSSLSASVGDTVTITCQARHAVGKNLNWYQQKPGRGPQLLIYMASSRHSGVPSRFRGSGSGREFTLTINNLQPEDFATYSCQQGYTYPWTFGQGTKVEM | 14.006693 | 13.292788 | 123 | 107 | 121 | 106 | 121 | 106 | 53 | ljf-085 heavy chain fv | ljf-085 light chain fv | macaca mulatta | macaca mulatta | B;C | protein;protein | hiv env jrfl nfl td cc3+ gp140;hiv env jrfl nfl td cc3+ gp140 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 52;47 | 15;16 | 0.68;0.76 | HL | train |
9cu5_F_G | 9cu5 | ljf-085 fab in complex with hiv env jrfl nfl td cc3+ trimer and 35o22 fab | yes | viral protein/immune system | 2024-07-25 | 2025-05-21 | electron microscopy | 3.4 | N.A. | N.A. | 40339576 | 10.1016/j.immuni.2025.04.010 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | F | G | QGQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSS | QSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQSK | GQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTV | SVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQS | 14.581856 | 13.701818 | 131 | 114 | 128 | 112 | 128 | 112 | 43 | 35o22 heavy chain fv | 35o22 light chain fv | homo sapiens | homo sapiens | C | protein | hiv env jrfl nfl td cc3+ gp140 | human immunodeficiency virus 1 | 39 | 13 | 0.65 | HL | train |
9cu6_F_G | 9cu6 | ljf-034 fab in complex with hiv env jrfl nfl td cc3+ trimer and 35o22 fab | no | viral protein/immune system | 2024-07-25 | 2025-05-21 | electron microscopy | 3.3 | N.A. | N.A. | 40339576 | 10.1016/j.immuni.2025.04.010 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | F | G | QGQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSS | QSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQSK | GQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVS | SVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQS | 14.525224 | 13.671929 | 131 | 114 | 129 | 112 | 129 | 112 | 43 | 35o22 heavy chain fv | 35o22 light chain fv | homo sapiens | homo sapiens | A | protein | jrfl nfl td cc3+ gp140 | human immunodeficiency virus 1 | 40 | 12 | 0.67 | HL | train |
9cu6_H_L | 9cu6 | ljf-034 fab in complex with hiv env jrfl nfl td cc3+ trimer and 35o22 fab | no | viral protein/immune system | 2024-07-25 | 2025-05-21 | electron microscopy | 3.3 | N.A. | N.A. | 40339576 | 10.1016/j.immuni.2025.04.010 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | H | L | QVQLQESGPGLVRPSETLSLACGVSYGSVDHYYWSWVRQPPGKGLEWIGYIDGYDGATNYSPSLKNRVTITIDTPNQFSLKMTSVSAADTAVYFCGRWNLYDDDHAYKSLAVWGRGILVVVSS | DIQMTQSPSSLSASVGDTVTITCRARHGVGENLNWYQQKPGKAPKVLIYMASSRQSGIPSRFRGGGSGTEFTLTISSLQPEDFGTYHCQQSYSYPWTFGQGTKVEIK | QVQLQESGPGLVRPSETLSLACGVSYGSVDHYYWSWVRQPPGKGLEWIGYIDGYDGATNYSPSLKNRVTITIDTPNQFSLKMTSVSAADTAVYFCGRWNLYDDDHAYKSLAVWGRGILVVVSS | DIQMTQSPSSLSASVGDTVTITCRARHGVGENLNWYQQKPGKAPKVLIYMASSRQSGIPSRFRGGGSGTEFTLTISSLQPEDFGTYHCQQSYSYPWTFGQGTKVEIK | 14.211358 | 13.185292 | 123 | 107 | 123 | 107 | 123 | 107 | 50 | ljf-034 heavy chain fv | ljf-034 light chain fv | macaca mulatta | macaca mulatta | A;B | protein;protein | jrfl nfl td cc3+ gp140;jrfl nfl td cc3+ gp140 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 49;49 | 19;15 | 0.83;0.71 | HL | train |
9cu6_J_K | 9cu6 | ljf-034 fab in complex with hiv env jrfl nfl td cc3+ trimer and 35o22 fab | no | viral protein/immune system | 2024-07-25 | 2025-05-21 | electron microscopy | 3.3 | N.A. | N.A. | 40339576 | 10.1016/j.immuni.2025.04.010 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | J | K | QGQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSS | QSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQSK | GQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVS | SVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQS | 14.612778 | 13.754107 | 131 | 114 | 129 | 112 | 129 | 112 | 48 | 35o22 heavy chain fv | 35o22 light chain fv | homo sapiens | homo sapiens | B | protein | jrfl nfl td cc3+ gp140 | human immunodeficiency virus 1 | 44 | 13 | 0.62 | HL | train |
9cu6_I_M | 9cu6 | ljf-034 fab in complex with hiv env jrfl nfl td cc3+ trimer and 35o22 fab | no | viral protein/immune system | 2024-07-25 | 2025-05-21 | electron microscopy | 3.3 | N.A. | N.A. | 40339576 | 10.1016/j.immuni.2025.04.010 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | I | M | QVQLQESGPGLVRPSETLSLACGVSYGSVDHYYWSWVRQPPGKGLEWIGYIDGYDGATNYSPSLKNRVTITIDTPNQFSLKMTSVSAADTAVYFCGRWNLYDDDHAYKSLAVWGRGILVVVSS | DIQMTQSPSSLSASVGDTVTITCRARHGVGENLNWYQQKPGKAPKVLIYMASSRQSGIPSRFRGGGSGTEFTLTISSLQPEDFGTYHCQQSYSYPWTFGQGTKVEIK | QVQLQESGPGLVRPSETLSLACGVSYGSVDHYYWSWVRQPPGKGLEWIGYIDGYDGATNYSPSLKNRVTITIDTPNQFSLKMTSVSAADTAVYFCGRWNLYDDDHAYKSLAVWGRGILVVVSS | DIQMTQSPSSLSASVGDTVTITCRARHGVGENLNWYQQKPGKAPKVLIYMASSRQSGIPSRFRGGGSGTEFTLTISSLQPEDFGTYHCQQSYSYPWTFGQGTKVEIK | 14.23766 | 13.138359 | 123 | 107 | 123 | 107 | 123 | 107 | 46 | ljf-034 heavy chain fv | ljf-034 light chain fv | macaca mulatta | macaca mulatta | B;C | protein;protein | jrfl nfl td cc3+ gp140;jrfl nfl td cc3+ gp140 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 52;45 | 19;17 | 0.79;0.74 | HL | train |
9cu6_D_E | 9cu6 | ljf-034 fab in complex with hiv env jrfl nfl td cc3+ trimer and 35o22 fab | no | viral protein/immune system | 2024-07-25 | 2025-05-21 | electron microscopy | 3.3 | N.A. | N.A. | 40339576 | 10.1016/j.immuni.2025.04.010 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | D | E | QGQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSS | QSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQSK | GQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVS | SVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQS | 14.602092 | 13.661581 | 131 | 114 | 129 | 112 | 129 | 112 | 41 | 35o22 heavy chain fv | 35o22 light chain fv | homo sapiens | homo sapiens | C | protein | jrfl nfl td cc3+ gp140 | human immunodeficiency virus 1 | 40 | 12 | 0.63 | HL | train |
9iw2_H_L | 9iw2 | chikungunya virus e protein complexed with c37 fab | no | antiviral protein | 2024-07-25 | 2025-07-30 | x-ray diffraction | 3.2 | 0.277 | 0.222 | 41184282 | 10.1038/s41467-025-64687-2 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV3 | H | L | EFATMETDTLLLWVLLLWVPGSTGDQVQLQESGPGLVKPSETLSLTCTVSGGSIGSSSYYWGWIRQPPGKGLQWIGSFHYSGTTYYNPSLKSRVTISVDTSKNHFSLKLSSVTAADTAVYYCASRQNWNDGYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPHHHHHH | METDTLLLWVLLLWVPGSTGDDIQMTQSPATLSLSPGERATLFCRASQSVSSSLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRGNWPPITFGQGTRLDTKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | QVQLQESGPGLVKPSETLSLTCTVSGGSIGSSSYYWGWIRQPPGKGLQWIGSFHYSGTTYYNPSLKSRVTISVDTSKNHFSLKLSSVTAADTAVYYCASRQNWNDGYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH | DIQMTQSPATLSLSPGERATLFCRASQSVSSSLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRGNWPPITFGQGTRLDTKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.62181 | 23.289356 | 265 | 237 | 228 | 212 | 228 | 212 | 114 | c37 heavy chain | c37 light chain | homo sapiens | homo sapiens | P | protein | togavirin | chikungunya virus | 37 | 16 | 0.89 | HL | train |
9cty_H | 9cty | human kv1.3-h451v with a0194009g09 nanobodies conformation 2 | yes | immune system | 2024-07-25 | 2026-01-28 | electron microscopy | 3.03 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | H | N.A. | MEVQLVESGGGLVQAGGSLGLSCSASGLLFSRNSAGWYRQAPGKQREFVARIRMGGSINYADTVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCSSWRTGFYEYWGQGTLVTVSSAAAHHHHHH | N.A. | EVQLVESGGGLVQAGGSLGLSCSASGLLFSRNSAGWYRQAPGKQREFVARIRMGGSINYADTVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCSSWRTGFYEYWGQGTLVTVS | N.A. | 13.571316 | 0 | 126 | 0 | 115 | 0 | 115 | 0 | 0 | a0194009g09 nanobody | N.A. | lama glama | N.A. | A;B | protein;protein | potassium voltage-gated channel subfamily a member 3/mvenus fusion protein,green fluorescent protein;potassium voltage-gated channel subfamily a member 3/mvenus fusion protein,green fluorescent protein | homo sapiens;homo sapiens | 23;22 | 10;6 | 0.91;0.55 | H_only | train |
9cty_G | 9cty | human kv1.3-h451v with a0194009g09 nanobodies conformation 2 | yes | immune system | 2024-07-25 | 2026-01-28 | electron microscopy | 3.03 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | G | N.A. | MEVQLVESGGGLVQAGGSLGLSCSASGLLFSRNSAGWYRQAPGKQREFVARIRMGGSINYADTVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCSSWRTGFYEYWGQGTLVTVSSAAAHHHHHH | N.A. | EVQLVESGGGLVQAGGSLGLSCSASGLLFSRNSAGWYRQAPGKQREFVARIRMGGSINYADTVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCSSWRTGFYEYWGQGTLVTVS | N.A. | 13.571332 | 0 | 126 | 0 | 115 | 0 | 115 | 0 | 0 | a0194009g09 nanobody | N.A. | lama glama | N.A. | A;D | protein;protein | potassium voltage-gated channel subfamily a member 3/mvenus fusion protein,green fluorescent protein;potassium voltage-gated channel subfamily a member 3/mvenus fusion protein,green fluorescent protein | homo sapiens;homo sapiens | 25;23 | 8;10 | 0.62;0.91 | H_only | train |
9cty_E | 9cty | human kv1.3-h451v with a0194009g09 nanobodies conformation 2 | yes | immune system | 2024-07-25 | 2026-01-28 | electron microscopy | 3.03 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | MEVQLVESGGGLVQAGGSLGLSCSASGLLFSRNSAGWYRQAPGKQREFVARIRMGGSINYADTVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCSSWRTGFYEYWGQGTLVTVSSAAAHHHHHH | N.A. | EVQLVESGGGLVQAGGSLGLSCSASGLLFSRNSAGWYRQAPGKQREFVARIRMGGSINYADTVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCSSWRTGFYEYWGQGTLVTVS | N.A. | 13.571326 | 0 | 126 | 0 | 115 | 0 | 115 | 0 | 0 | a0194009g09 nanobody | N.A. | lama glama | N.A. | B;C | protein;protein | potassium voltage-gated channel subfamily a member 3/mvenus fusion protein,green fluorescent protein;potassium voltage-gated channel subfamily a member 3/mvenus fusion protein,green fluorescent protein | homo sapiens;homo sapiens | 23;22 | 10;6 | 0.91;0.55 | H_only | train |
9cty_F | 9cty | human kv1.3-h451v with a0194009g09 nanobodies conformation 2 | yes | immune system | 2024-07-25 | 2026-01-28 | electron microscopy | 3.03 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | MEVQLVESGGGLVQAGGSLGLSCSASGLLFSRNSAGWYRQAPGKQREFVARIRMGGSINYADTVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCSSWRTGFYEYWGQGTLVTVSSAAAHHHHHH | N.A. | EVQLVESGGGLVQAGGSLGLSCSASGLLFSRNSAGWYRQAPGKQREFVARIRMGGSINYADTVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCSSWRTGFYEYWGQGTLVTVS | N.A. | 13.571313 | 0 | 126 | 0 | 115 | 0 | 115 | 0 | 0 | a0194009g09 nanobody | N.A. | lama glama | N.A. | C;D | protein;protein | potassium voltage-gated channel subfamily a member 3/mvenus fusion protein,green fluorescent protein;potassium voltage-gated channel subfamily a member 3/mvenus fusion protein,green fluorescent protein | homo sapiens;homo sapiens | 23;22 | 10;6 | 0.91;0.55 | H_only | train |
9ixa_H_L | 9ixa | cryo-em structure of chikungunya virus glycoprotein e1-e2 with c34 fab. | no | antifungal protein | 2024-07-26 | 2025-11-19 | electron microscopy | 3.11 | N.A. | N.A. | 41184282 | 10.1038/s41467-025-64687-2 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EFATMETDTLLLWVLLLWVPGSTGDEVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDMGYSGNDDYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPHHHHHH | ELATMETDTLLLWVLLLWVPGSTGDDIQLTQSPSSLSASVGDRVTITCRASQRISSYLNWYQQKPGKAPKLLIYGAFSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYRTLTRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDMGYSGNDDYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | DIQLTQSPSSLSASVGDRVTITCRASQRISSYLNWYQQKPGKAPKLLIYGAFSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYRTLTRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFN | 23.02068 | 22.389257 | 268 | 241 | 224 | 211 | 224 | 211 | 112 | c34 fab, heavy chain | c34 fab, light chain | homo sapiens | homo sapiens | B;A | protein;protein | chikv e1;chikv e2 | chikungunya virus;chikungunya virus | 17;46 | 8;14 | 1.0;0.58 | HL | train |
9cv7_H_L | 9cv7 | ljf-085 fab in complex with hiv env zm233 nfl td cc3+ trimer | no | viral protein/immune system | 2024-07-28 | 2025-05-21 | electron microscopy | 3.8 | N.A. | N.A. | 40339576 | 10.1016/j.immuni.2025.04.010 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | H | L | QVQLQESGPGLVKPSETLSLTCTVSGGSIDDYFWNWVRQPPGKPLECIGYIFGRGGGTKYNPSLDNRVTISTDTPNQFSLKLRSVTVADTAIYYCARWNLYDDDFGYNSFAVWGRGVLVTVSS | DIQMTQSPSSLSASVGDTVTITCQARHAVGKNLNWYQQKPGRGPQLLIYMASSRHSGVPSRFRGSGSGREFTLTINNLQPEDFATYSCQQGYTYPWTFGQGTKVEMK | VQLQESGPGLVKPSETLSLTCTVSGGSIDDYFWNWVRQPPGKPLECIGYIFGRGGGTKYNPSLDNRVTISTDTPNQFSLKLRSVTVADTAIYYCARWNLYDDDFGYNSFAVWGRGVLVTV | DIQMTQSPSSLSASVGDTVTITCQARHAVGKNLNWYQQKPGRGPQLLIYMASSRHSGVPSRFRGSGSGREFTLTINNLQPEDFATYSCQQGYTYPWTFGQGTKVEM | 14.005958 | 13.202818 | 123 | 107 | 120 | 106 | 120 | 106 | 49 | ljf-085 heavy chain fv | ljf-085 light chain fv | macaca mulatta | macaca mulatta | B;C | protein;protein | zm233 nfl td cc3+ gp140;zm233 nfl td cc3+ gp140 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 43;48 | 15;16 | 0.83;0.67 | HL | train |
9ixj_N | 9ixj | histamine-bound h2r in complex with gs | yes | membrane protein/immune system | 2024-07-28 | 2025-07-30 | electron microscopy | 2.92 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSAAALEHHHHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 14.256004 | 0 | 161 | 0 | 128 | 0 | 128 | 0 | 0 | nb35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 40;30 | 10;12 | 0.5;0.75 | H_only | train |
9iy2_H_L | 9iy2 | immune complex of hev-e2s, nab 8c11 and nab 8h3 | no | immune system | 2024-07-29 | 2024-08-28 | x-ray diffraction | 3.48 | 0.269 | 0.223 | 39585981 | 10.1073/pnas.2408585121 | 0 | auth_asym_id | FabH:FabL | IGHV2 | IGKV1 | H | L | QVTLKESGPGILQPSQTLSLTCSFSGFSLSTSGMGVGWIRQPSGKGLEWLAHIWWDDVKRYSPALKSRLTISKDTSSSQLFLKIASVDTADTATYYCARIKSVITTGDYALDYWGQGTSVAVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCTSKP | DIQMTQSPASLSVSVGETVTITCRASEIIYSNLAWYQQKQGKSPQLLVYSATNLAEGVPSRFSGSGSGTQYSLKINSLQSEDFGSYYCQHFWGNPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | QVTLKESGPGILQPSQTLSLTCSFSGFSLSTSGMGVGWIRQPSGKGLEWLAHIWWDDVKRYSPALKSRLTISKDTSSSQLFLKIASVDTADTATYYCARIKSVITTGDYALDYWGQGTSVAVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR | DIQMTQSPASLSVSVGETVTITCRASEIIYSNLAWYQQKQGKSPQLLVYSATNLAEGVPSRFSGSGSGTQYSLKINSLQSEDFGSYYCQHFWGNPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE | 22.825985 | 22.973717 | 230 | 214 | 218 | 213 | 224 | 213 | 100 | heavy chain of mab 8c11 | light chain of mab 8c11 | mus sp. | mus sp. | A | protein | secreted protein orf2 | hepatitis e virus (strain pakistan) | 53 | 21 | 0.81 | HL | train |
9iy2_E_F | 9iy2 | immune complex of hev-e2s, nab 8c11 and nab 8h3 | no | immune system | 2024-07-29 | 2024-08-28 | x-ray diffraction | 3.48 | 0.269 | 0.223 | 39585981 | 10.1073/pnas.2408585121 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV4 | E | F | QVQLKESGPGLVAPSQSLSITCTVSGFSLIGYGVNWVRQPPEKGLEWLGMIWGDGSTDYNSALKSRLSITKDNSKSQVFLKMNSLQTDDTARYYCAMGVRPDPFDYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSTVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCTS | NIMMTQSPSSLAVSAGEKVTMSCKSSQSVLYSSNQKNYLAWYQQKPGQSPKLLIYWASARESGVPDRFTGSGSGTDFTLTINSVQTEDLAVYYCHQYLSSYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | QVQLKESGPGLVAPSQSLSITCTVSGFSLIGYGVNWVRQPPEKGLEWLGMIWGDGSTDYNSALKSRLSITKDNSKSQVFLKMNSLQTDDTARYYCAMGVRPDPFDYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSTVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | NIMMTQSPSSLAVSAGEKVTMSCKSSQSVLYSSNQKNYLAWYQQKPGQSPKLLIYWASARESGVPDRFTGSGSGTDFTLTINSVQTEDLAVYYCHQYLSSYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN | 21.459505 | 24.170292 | 221 | 219 | 219 | 217 | 219 | 217 | 95 | heavy chain of mab 8h3 | light chain of mab 8h3 | mus sp. | mus sp. | A;B | protein;protein | secreted protein orf2;secreted protein orf2 | hepatitis e virus (strain pakistan);hepatitis e virus (strain pakistan) | 23;32 | 10;11 | 1.0;0.73 | HL | train |
9iy2_G_I | 9iy2 | immune complex of hev-e2s, nab 8c11 and nab 8h3 | no | immune system | 2024-07-29 | 2024-08-28 | x-ray diffraction | 3.48 | 0.269 | 0.223 | 39585981 | 10.1073/pnas.2408585121 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV4 | G | I | QVQLKESGPGLVAPSQSLSITCTVSGFSLIGYGVNWVRQPPEKGLEWLGMIWGDGSTDYNSALKSRLSITKDNSKSQVFLKMNSLQTDDTARYYCAMGVRPDPFDYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSTVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCTS | NIMMTQSPSSLAVSAGEKVTMSCKSSQSVLYSSNQKNYLAWYQQKPGQSPKLLIYWASARESGVPDRFTGSGSGTDFTLTINSVQTEDLAVYYCHQYLSSYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | QVQLKESGPGLVAPSQSLSITCTVSGFSLIGYGVNWVRQPPEKGLEWLGMIWGDGSTDYNSALKSRLSITKDNSKSQVFLKMNSLQTDDTARYYCAMGVRPDPFDYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSTVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | NIMMTQSPSSLAVSAGEKVTMSCKSSQSVLYSSNQKNYLAWYQQKPGQSPKLLIYWASARESGVPDRFTGSGSGTDFTLTINSVQTEDLAVYYCHQYLSSYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN | 21.425678 | 24.158148 | 221 | 219 | 219 | 217 | 219 | 217 | 90 | heavy chain of mab 8h3 | light chain of mab 8h3 | mus sp. | mus sp. | A;B | protein;protein | secreted protein orf2;secreted protein orf2 | hepatitis e virus (strain pakistan);hepatitis e virus (strain pakistan) | 31;24 | 10;10 | 0.71;0.91 | HL | train |
9iy2_D_C | 9iy2 | immune complex of hev-e2s, nab 8c11 and nab 8h3 | no | immune system | 2024-07-29 | 2024-08-28 | x-ray diffraction | 3.48 | 0.269 | 0.223 | 39585981 | 10.1073/pnas.2408585121 | 0 | auth_asym_id | FabH:FabL | IGHV2 | IGKV1 | D | C | QVTLKESGPGILQPSQTLSLTCSFSGFSLSTSGMGVGWIRQPSGKGLEWLAHIWWDDVKRYSPALKSRLTISKDTSSSQLFLKIASVDTADTATYYCARIKSVITTGDYALDYWGQGTSVAVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCTSKP | DIQMTQSPASLSVSVGETVTITCRASEIIYSNLAWYQQKQGKSPQLLVYSATNLAEGVPSRFSGSGSGTQYSLKINSLQSEDFGSYYCQHFWGNPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | QVTLKESGPGILQPSQTLSLTCSFSGFSLSTSGMGVGWIRQPSGKGLEWLAHIWWDDVKRYSPALKSRLTISKDTSSSQLFLKIASVDTADTATYYCARIKSVITTGDYALDYWGQGTSVAVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR | DIQMTQSPASLSVSVGETVTITCRASEIIYSNLAWYQQKQGKSPQLLVYSATNLAEGVPSRFSGSGSGTQYSLKINSLQSEDFGSYYCQHFWGNPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE | 22.903742 | 22.82345 | 230 | 214 | 218 | 213 | 224 | 213 | 98 | heavy chain of mab 8c11 | light chain of mab 8c11 | mus sp. | mus sp. | B | protein | secreted protein orf2 | hepatitis e virus (strain pakistan) | 51 | 23 | 0.85 | HL | train |
9iy0_H_L | 9iy0 | anti-hev mab 8h3 | no | immune system | 2024-07-29 | 2024-09-04 | x-ray diffraction | 1.97 | 0.231 | 0.192 | 39585981 | 10.1073/pnas.2408585121 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV4 | H | L | QVQLKESGPGLVAPSQSLSITCTVSGFSLIGYGVNWVRQPPEKGLEWLGMIWGDGSTDYNSALKSRLSITKDNSKSQVFLKMNSLQTDDTARYYCAMGVRPDPFDYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSTVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCTS | NIMMTQSPSSLAVSAGEKVTMSCKSSQSVLYSSNQKNYLAWYQQKPGQSPKLLIYWASARESGVPDRFTGSGSGTDFTLTINSVQTEDLAVYYCHQYLSSYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | QVQLKESGPGLVAPSQSLSITCTVSGFSLIGYGVNWVRQPPEKGLEWLGMIWGDGSTDYNSALKSRLSITKDNSKSQVFLKMNSLQTDDTARYYCAMGVRPDPFDYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSTVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | NIMMTQSPSSLAVSAGEKVTMSCKSSQSVLYSSNQKNYLAWYQQKPGQSPKLLIYWASARESGVPDRFTGSGSGTDFTLTINSVQTEDLAVYYCHQYLSSYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN | 21.460007 | 24.162615 | 221 | 219 | 219 | 217 | 219 | 217 | 96 | heavy chain of 8h3 fab | light chain of 8h3 fab | mus sp. | mus sp. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9ixx_E | 9ixx | structural basis of the cysteinyl leukotriene receptor type 2 activation by ltd4 | no | membrane protein/immune system | 2024-07-29 | 2025-04-02 | electron microscopy | 3.15 | N.A. | N.A. | 40193607 | 10.1073/pnas.2417148122 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | MVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.236435 | 0 | 248 | 0 | 230 | 0 | 247 | 0 | 0 | scfv16 | N.A. | rattus norvegicus | N.A. | A;B | protein;protein | g-alpha q;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 32;24 | 20;9 | 0.95;0.82 | H_only | train |
9ixv_H_L | 9ixv | cryo-em structure of mers-cov s1-ntd bound with knih-88 fab | no | viral protein | 2024-07-29 | 2025-04-30 | electron microscopy | 3.11 | N.A. | N.A. | 40241666 | 10.1093/infdis/jiaf202 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLIQPGGSLRLSCAASGFTVIDYYMTWVRQAPGKGLEWVSVIYAGGSTYYADSVKGRFTVSRDYSRNTLYLQMNSLKAEDTAVYYCTRDYLAAGGLWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | EIVLTQSPSSLSASVGDRVTITCRASQGIRNNLAWYQQKPGQVPELLIYGASNLKPGVPSRFSGSASGTDFTLTISSMQPEDVATYYCQKYDSAPLTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVESGGGLIQPGGSLRLSCAASGFTVIDYYMTWVRQAPGKGLEWVSVIYAGGSTYYADSVKGRFTVSRDYSRNTLYLQMNSLKAEDTAVYYCTRDYLAAGGLWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | EIVLTQSPSSLSASVGDRVTITCRASQGIRNNLAWYQQKPGQVPELLIYGASNLKPGVPSRFSGSASGTDFTLTISSMQPEDVATYYCQKYDSAPLTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTL | 19.85981 | 20.551126 | 216 | 214 | 193 | 163 | 215 | 181 | 69 | heavy chain from knih-88, monoclonal antibody | light chain from knih-88, monoclonal antibody | homo sapiens | homo sapiens | A | protein | spike glycoprotein | middle east respiratory syndrome-related coronavirus | 44 | 16 | 0.73 | HL | train |
9cx3_A | 9cx3 | structure of sh3 domain of src in complex with beta-arrestin 1 | yes | signaling protein | 2024-07-30 | 2024-11-13 | electron microscopy | 3.47 | N.A. | N.A. | 39131402 | 10.1101/2024.07.31.605623 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | A | N.A. | QVQLQESGGGLVQAGGSLRLSCVVSGFFFDTVTMAWYRRAPGKHRELVASATAGGTTTYADSVKDRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNTFVRSLSWGQGTQVTVSSHHHHHHEPEA | N.A. | QLQESGGGLVQAGGSLRLSCVVSGFFFDTVTMAWYRRAPGKHRELVASATAGGTTTYADSVKDRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNTFVRSLSWGQGTQVTVS | N.A. | 13.199219 | 0 | 124 | 0 | 111 | 0 | 111 | 0 | 0 | nanobody 32 | N.A. | lama glama | N.A. | B | protein | beta-arrestin-1 | rattus norvegicus | 36 | 11 | 0.65 | H_only | train |
9cx3_H_L | 9cx3 | structure of sh3 domain of src in complex with beta-arrestin 1 | yes | signaling protein | 2024-07-30 | 2024-11-13 | electron microscopy | 3.47 | N.A. | N.A. | 39131402 | 10.1101/2024.07.31.605623 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKGLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRQFWYSGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHHHHHHHH | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYKYVPVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKGLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRQFWYSGLDYWGQGTLVTV | IQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYKYVPVTFGQGTKVEI | 13.711698 | 13.118922 | 237 | 215 | 114 | 103 | 114 | 105 | 33 | antibody fragment fab30, heavy chain | antibody fragment fab30, light chain | mus musculus | mus musculus | B | protein | beta-arrestin-1 | rattus norvegicus | 39 | 15 | 0.88 | HL | train |
9iyb_E | 9iyb | cryo-em structure of the prostaglandin d2 receptor 2-pgd2 coupled to g protein | yes | membrane protein | 2024-07-30 | 2024-12-04 | electron microscopy | 2.82 | N.A. | N.A. | 39665758 | 10.1073/pnas.2403304121 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | MVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.375563 | 0 | 248 | 0 | 230 | 0 | 247 | 0 | 0 | scfv16 | N.A. | rattus norvegicus | N.A. | B;C | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 32;25 | 20;10 | 0.95;0.77 | H_only | train |
9iya_H_L | 9iya | cryo-em structure of gpr55-fab-nb-ono-9710531 complex | no | structural protein | 2024-07-30 | 2025-01-01 | electron microscopy | 3.04 | N.A. | N.A. | 39482405 | 10.1038/s41422-024-01046-8 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | WSCIILFLVATATGVHSEISEVQLVESGGGLVQPGGSLRLSCAASGFNVRSFSIHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNVRSFSIHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 23.178856 | 22.480791 | 246 | 215 | 222 | 212 | 225 | 212 | 107 | anti-bril fab heavy chain | anti-bril fab light chain | homo sapiens | homo sapiens | A | protein | g-protein coupled receptor 55,soluble cytochrome b562 | homo sapiens | 39 | 17 | 0.81 | HL | train |
9iya_N | 9iya | cryo-em structure of gpr55-fab-nb-ono-9710531 complex | no | structural protein | 2024-07-30 | 2025-01-01 | electron microscopy | 3.04 | N.A. | N.A. | 39482405 | 10.1038/s41422-024-01046-8 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | GSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS | N.A. | 13.704334 | 0 | 123 | 0 | 117 | 0 | 120 | 0 | 0 | anti-fab nanobody | N.A. | homo sapiens | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9cx7_K_L | 9cx7 | native human gabaa receptor of beta3-alpha1-gamma2-beta3-alpha2 assembly | no | membrane protein | 2024-07-30 | 2025-01-22 | electron microscopy | 3.3 | N.A. | N.A. | 39843743 | 10.1038/s41586-024-08454-1 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | K | L | EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMYWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITTDTFSNTAYLQLSSLTSEDTAVYYCARKGLRWAMDYWGQGTSVTVSTAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPSGPISTINPCPPCKECHKCPAPNLEGGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDW... | NIVMTQSPKSMSMSVGERVTLSCKASEYVGTYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFTGSGSATDFTLTIGSVQAEDLADYHCGQSYSYPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | VQLQQSGAELVKPGASVKLSCTASGFNIKDTYMYWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITTDTFSNTAYLQLSSLTSEDTAVYYCARKGLRWAMDYWGQGTSVTVST | NIVMTQSPKSMSMSVGERVTLSCKASEYVGTYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFTGSGSATDFTLTIGSVQAEDLADYHCGQSYSYPTFGAGTKLELK | 13.989223 | 13.410345 | 454 | 213 | 117 | 106 | 117 | 106 | 52 | igg2b fab_1f4 heavy chain | kappa fab_1f4 light chain | mus musculus | mus musculus | B | protein | gamma-aminobutyric acid receptor subunit alpha-1 | homo sapiens | 41 | 16 | 0.8 | HL | train |
9iyi_M_N | 9iyi | vlp structure of chikungunya virus complexed with c34 fab, 2f block. | no | virus like particle | 2024-07-30 | 2025-11-12 | electron microscopy | 3.73 | N.A. | N.A. | 41184282 | 10.1038/s41467-025-64687-2 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | M | N | METDTLLLWVLLLWVPGSTGDEVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDMGYSGNDDYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPHHHHHH | ELATMETDTLLLWVLLLWVPGSTGDDIQLTQSPSSLSASVGDRVTITCRASQRISSYLNWYQQKPGKAPKLLIYGAFSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYRTLTRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDMGYSGNDDYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | DIQLTQSPSSLSASVGDRVTITCRASQRISSYLNWYQQKPGKAPKLLIYGAFSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYRTLTRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFN | 23.167315 | 22.676401 | 264 | 241 | 224 | 211 | 224 | 211 | 109 | c34 fab, heavy chain | c34 fab, light chain | homo sapiens | homo sapiens | E;A | protein;protein | structural polyprotein;chikv e1 | chikungunya virus;chikungunya virus | 44;17 | 15;7 | 0.71;1.0 | HL | train |
9iyi_O_P | 9iyi | vlp structure of chikungunya virus complexed with c34 fab, 2f block. | no | virus like particle | 2024-07-30 | 2025-11-12 | electron microscopy | 3.73 | N.A. | N.A. | 41184282 | 10.1038/s41467-025-64687-2 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | O | P | METDTLLLWVLLLWVPGSTGDEVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDMGYSGNDDYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPHHHHHH | ELATMETDTLLLWVLLLWVPGSTGDDIQLTQSPSSLSASVGDRVTITCRASQRISSYLNWYQQKPGKAPKLLIYGAFSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYRTLTRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDMGYSGNDDYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | DIQLTQSPSSLSASVGDRVTITCRASQRISSYLNWYQQKPGKAPKLLIYGAFSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYRTLTRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFN | 23.025677 | 22.61436 | 264 | 241 | 224 | 211 | 224 | 211 | 93 | c34 fab, heavy chain | c34 fab, light chain | homo sapiens | homo sapiens | F;B | protein;protein | structural polyprotein;chikv e1 | chikungunya virus;chikungunya virus | 48;15 | 18;8 | 0.72;1.0 | HL | train |
9iyi_Q_R | 9iyi | vlp structure of chikungunya virus complexed with c34 fab, 2f block. | no | virus like particle | 2024-07-30 | 2025-11-12 | electron microscopy | 3.73 | N.A. | N.A. | 41184282 | 10.1038/s41467-025-64687-2 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | Q | R | METDTLLLWVLLLWVPGSTGDEVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDMGYSGNDDYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPHHHHHH | ELATMETDTLLLWVLLLWVPGSTGDDIQLTQSPSSLSASVGDRVTITCRASQRISSYLNWYQQKPGKAPKLLIYGAFSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYRTLTRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDMGYSGNDDYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | DIQLTQSPSSLSASVGDRVTITCRASQRISSYLNWYQQKPGKAPKLLIYGAFSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYRTLTRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFN | 23.260681 | 22.806091 | 264 | 241 | 224 | 211 | 224 | 211 | 105 | c34 fab, heavy chain | c34 fab, light chain | homo sapiens | homo sapiens | G;C | protein;protein | structural polyprotein;chikv e1 | chikungunya virus;chikungunya virus | 40;16 | 14;8 | 0.7;1.0 | HL | train |
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