PDB_ID_chain
stringlengths
6
10
PDB_ID
stringlengths
4
4
Title
stringlengths
4
230
Mutation(s)
stringclasses
2 values
Classification
stringclasses
305 values
Deposit_date
stringdate
1976-03-17 00:00:00
2026-01-20 00:00:00
Release_date
stringdate
1976-05-19 00:00:00
2026-02-25 00:00:00
Method
stringclasses
5 values
Resolution
stringclasses
459 values
R_free
stringclasses
227 values
R_work
stringclasses
211 values
PMID
stringlengths
4
8
DOI
stringlengths
4
68
Model_index
int64
0
76
Asym_ID_type
stringclasses
2 values
Ab_type
stringclasses
30 values
H_subgroup
stringclasses
8 values
L_subgroup
stringclasses
19 values
H_chain_ID
stringclasses
60 values
L_chain_ID
stringclasses
58 values
H_fas_seq
stringlengths
4
919
L_fas_seq
stringlengths
4
627
H_filled_pdb_seq
stringlengths
4
896
L_filled_pdb_seq
stringlengths
4
523
H_mean_radius
float64
0
79.7
L_mean_radius
float64
0
84.3
H_fas_seq_len
int64
0
919
L_fas_seq_len
int64
0
627
H_pdb_seq_len
int64
0
879
L_pdb_seq_len
int64
0
523
H_filled_seq_len
int64
0
896
L_filled_seq_len
int64
0
523
HL_inf_res_num
int64
0
175
H_mol_name
stringlengths
2
331
L_mol_name
stringlengths
2
151
H_species
stringclasses
68 values
L_species
stringclasses
42 values
Ag_chain_ID(s)
stringclasses
279 values
Ag_type(s)
stringclasses
16 values
Ag_mol_name(s)
stringlengths
2
390
Ag_species
stringclasses
743 values
Ab_ag_inf_res_num
stringlengths
1
11
CDR_inf_res_num
stringclasses
444 values
CDR_inf_res_ratio
stringlengths
1
19
hl_label
stringclasses
3 values
split
stringclasses
1 value
9hap_K
9hap
cryo-em structure of inactive human arginine-vasopressin (avp) v2 receptor (v2r) with tolvaptan
yes
membrane protein
2024-11-04
2025-06-04
electron microscopy
2.5
N.A.
N.A.
40274867
10.1038/s41467-025-59114-5
0
auth_asym_id
VHH
IGHV3
N.A.
K
N.A.
AQPAMAQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSSLEDYKDDKHHHHHH
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS
N.A.
13.853007
0
141
0
120
0
120
0
0
anti-bril fab nanobody
N.A.
homo sapiens
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
9hap_H_L
9hap
cryo-em structure of inactive human arginine-vasopressin (avp) v2 receptor (v2r) with tolvaptan
yes
membrane protein
2024-11-04
2025-06-04
electron microscopy
2.5
N.A.
N.A.
40274867
10.1038/s41467-025-59114-5
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EISEVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
23.652855
22.826149
231
215
225
212
225
212
111
synthetic antibody, anti-bril fab fragment, heavy chain
synthetic antibody, anti-bril fab fragment, light chain
homo sapiens
homo sapiens
R
protein
vasopressin v2 receptor,soluble cytochrome b562
homo sapiens
44
19
0.83
HL
train
9e89_H_L
9e89
cpv2a capsid complexed with scfv2
no
virus/immune system
2024-11-05
2025-01-29
electron microscopy
3.5
N.A.
N.A.
39951487
10.1073/pnas.2423460122
0
auth_asym_id
VH:VL
IGHV3
IGLV2
H
L
EVQLVESGGDLVKPGGSLRLSCEASGFTFSNYHMAWVRQAPGKGLQWVANIDSGGFTTNYVDAVRGRFTVSRDNGALYLQMNGLRVEDTAVYYCATMKTTYCIDENCNSFQAGRGVFDNWGQGTLVTVSS
VLTQKASVSGSLGQTITISCTGTSSNIGHNNVGWYQQLPGRGPRTVVSGTNSRPSGVSDRFSASKSGNTATLTISGLRADDEADYYCSTWDDSLNVVFGGGTHLTVL
EVQLVESGGDLVKPGGSLRLSCEASGFTFSNYHMAWVRQAPGKGLQWVANIDSGGFTTNYVDAVRGRFTVSRDNGALYLQMNGLRVEDTAVYYCATMKTTYCIDENCNSFQAGRGVFDNWGQGTLVTVSS
VLTQKASVSGSLGQTITISCTGTSSNIGHNNVGWYQQLPGRGPRTVVSGTNSRPSGVSDRFSASKSGNTATLTISGLRADDEADYYCSTWDDSLNVVFGGGTHLTVL
15.471026
13.318054
130
107
130
107
130
107
51
heavy-chain of scfv clone 2
light-chain of scfv clone 2
canis lupus familiaris
canis lupus familiaris
A
protein
capsid protein
canine parvovirus 2b
40
19
0.95
HL
train
9kef_H_L
9kef
crystal strucutre of rabv-g in complex with sojb-fab complex
no
viral protein
2024-11-05
2025-04-23
x-ray diffraction
3.4
0.264
0.217
40154685
10.1016/j.ijbiomac.2025.142570
0
auth_asym_id
FabH:FabL
IGHV2
IGLV3
H
L
QITLKETGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWVTLIYWDDDKRYSPSLENRVTIRKDTSKNQVALTMTNMDPLDTGTYYCAHRQHISSFPWFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTGGSHHHHHH
SYVLTQPPSVSVAPGKTARINCGGNNIEYRSVHWYQQKSGQAPVAVIYDNSDRPSGIPERFSGSKSGNTATLTISRVEAGDEADYYCQVWDISSDVVFGGGTKLTVLGQPKAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QITLKETGPTLVKPTQTLTLTCTFSGFSLSTSGVGVGWIRQPPGKALEWVTLIYWDDDKRYSPSLENRVTIRKDTSKNQVALTMTNMDPLDTGTYYCAHRQHISSFPWFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
SYVLTQPPSVSVAPGKTARINCGGNNIEYRSVHWYQQKSGQAPVAVIYDNSDRPSGIPERFSGSKSGNTATLTISRVEAGDEADYYCQVWDISSDVVFGGGTKLTVLGQPKAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
22.552435
23.264713
239
215
214
210
223
213
99
sojb-fab hchain
sojb-fab lchian
homo sapiens
homo sapiens
A
protein
rabv-g
rabies virus cvs-11
56
26
0.9
HL
train
9kep_D_A
9kep
rabv-g-phd-fd/nm57-scfv
no
viral protein
2024-11-05
2025-04-23
x-ray diffraction
2.89
0.281
0.233
40154685
10.1016/j.ijbiomac.2025.142570
0
auth_asym_id
VH:VL
IGHV1
IGLV2
D
A
QVQLVQSGAEVKKPGSSVKVSCKASGGTFNRYTVNWVRQAPGQGLEWMGGIIPIFGTANYAQRFQGRLTITADESTSTAYMELSSLRSDDTAVYFCARENLDNSGTYYYFSGWFDPWGQGTLVTVSS
QSALTQPRSVSGSPGQSVTISCTGTSSDIGGYNFVSWYQQHPGKAPKLMIYDATKRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGDYTPGVVFGGGTKLTVLGQPK
VQLVQSGAEVKKPGSSVKVSCKASGGTFNRYTVNWVRQAPGQGLEWMGGIIPIFGTANYAQRFQGRLTITADESTSTAYMELSSLRSDDTAVYFCARENLDNSGTYYYFSGWFDPWGQGTLVTVS
QSALTQPRSVSGSPGQSVTISCTGTSSDIGGYNFVSWYQQHPGKAPKLMIYDATKRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGDYTPGVVFGGGTKLTVLG
14.244754
13.803062
127
116
125
113
125
113
53
nm57-scfv heavy chain
nm57-scfv light chain
homo sapiens
homo sapiens
B
protein
rabv-g-phd-fd
rabies virus cvs-11
50
24
0.89
HL
train
9kfi_S
9kfi
cryo-em structure of the human relaxin family peptide receptor 3 in complex with relaxin-3 and g protein
yes
structural proten/immune system
2024-11-06
2025-08-13
electron microscopy
2.91
N.A.
N.A.
40410443
10.1038/s42003-025-08220-7
0
auth_asym_id
scFv
N.A.
N.A.
S
N.A.
MVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.295181
0
248
0
230
0
247
0
0
scfv16
N.A.
synthetic construct
N.A.
I;T
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-2;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
33;24
21;9
0.91;0.75
H_only
train
9kfj_S
9kfj
cryo-em structure of the compound 4-bound human relaxin family peptide receptor 3 (rxfp3)-gi complex
yes
structural protein/immune system
2024-11-06
2025-08-13
electron microscopy
3.1
N.A.
N.A.
40410443
10.1038/s42003-025-08220-7
0
auth_asym_id
scFv
N.A.
N.A.
S
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.173517
0
247
0
230
0
247
0
0
scfv16
N.A.
synthetic construct
N.A.
I;T
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-2;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
39;23
24;9
0.89;0.75
H_only
train
9kft_S
9kft
cryo-em structure of the fmlfc-fpr1-gi complex
no
peptide binding protein
2024-11-06
2025-11-12
electron microscopy
3.06
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
scFv
N.A.
N.A.
S
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLE
N.A.
17.151638
0
247
0
232
0
246
0
0
scfv16
N.A.
vicugna pacos
N.A.
B;A
protein;protein
guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1
homo sapiens;homo sapiens
22;34
9;20
0.75;0.91
H_only
train
9hbp_E
9hbp
cryo-em structure of the canine distemper virus tetrameric attachment h glycoprotein in complex with two different nanobodies
no
viral protein
2024-11-07
2026-01-21
electron microscopy
4.3
N.A.
N.A.
41501035
10.1038/s41467-025-67600-z
0
auth_asym_id
VHH
IGHV3
N.A.
E
N.A.
EVQLVESGGGVVRPGRSLRLSCTVSGDIFGMDAIFSFSAMGWYRQAPGNQRELVATMSRAGSTNFADSVKGRFTISRDNAKKTLYLQMNNLKPEDTAVYYCNVPLGPQGNWGQGTQVTVSSAAA
N.A.
EVQLVESGGGVVRPGRSLRLSCTVSGDIFGMDAIFSFSAMGWYRQAPGNQRELVATMSRAGSTNFADSVKGRFTISRDNAKKTLYLQMNNLKPEDTAVYYCNVPLGPQGNWGQGTQVTVSSA
N.A.
14.056185
0
124
0
122
0
122
0
0
nanobody h7
N.A.
lama glama
N.A.
A
protein
hemagglutinin glycoprotein
morbillivirus canis
56
19
0.79
H_only
train
9hbp_G
9hbp
cryo-em structure of the canine distemper virus tetrameric attachment h glycoprotein in complex with two different nanobodies
no
viral protein
2024-11-07
2026-01-21
electron microscopy
4.3
N.A.
N.A.
41501035
10.1038/s41467-025-67600-z
0
auth_asym_id
VHH
IGHV3
N.A.
G
N.A.
EVQLVESGGGLVQAGGSLRLTCAASGSIFSINTMGWYRQAPGKERELVATITSGGSTKYADSVKDRFIISRDKRKNTVYLQMNSLKPEDTAVYVCNARIRPYIYSALQPENDYWGQGTQVTVSSAAA
N.A.
EVQLVESGGGLVQAGGSLRLTCAASGSIFSINTMGWYRQAPGKERELVATITSGGSTKYADSVKDRFIISRDKRKNTVYLQMNSLKPEDTAVYVCNARIRPYIYSALQPENDYWGQGTQVTVSSA
N.A.
14.967383
0
127
0
119
0
125
0
0
nanobody h9
N.A.
lama glama
N.A.
A;B
protein;protein
hemagglutinin glycoprotein;hemagglutinin glycoprotein
morbillivirus canis;morbillivirus canis
20;26
9;9
1.0;0.75
H_only
train
9hbp_H
9hbp
cryo-em structure of the canine distemper virus tetrameric attachment h glycoprotein in complex with two different nanobodies
no
viral protein
2024-11-07
2026-01-21
electron microscopy
4.3
N.A.
N.A.
41501035
10.1038/s41467-025-67600-z
0
auth_asym_id
VHH
IGHV3
N.A.
H
N.A.
EVQLVESGGGLVQAGGSLRLTCAASGSIFSINTMGWYRQAPGKERELVATITSGGSTKYADSVKDRFIISRDKRKNTVYLQMNSLKPEDTAVYVCNARIRPYIYSALQPENDYWGQGTQVTVSSAAA
N.A.
EVQLVESGGGLVQAGGSLRLTCAASGSIFSINTMGWYRQAPGKERELVATITSGGSTKYADSVKDRFIISRDKRKNTVYLQMNSLKPEDTAVYVCNARIRPYIYSALQPENDYWGQGTQVTVS
N.A.
14.883656
0
127
0
116
0
123
0
0
nanobody h9
N.A.
lama glama
N.A.
A;B
protein;protein
hemagglutinin glycoprotein;hemagglutinin glycoprotein
morbillivirus canis;morbillivirus canis
29;19
10;8
0.71;1.0
H_only
train
9hbp_F
9hbp
cryo-em structure of the canine distemper virus tetrameric attachment h glycoprotein in complex with two different nanobodies
no
viral protein
2024-11-07
2026-01-21
electron microscopy
4.3
N.A.
N.A.
41501035
10.1038/s41467-025-67600-z
0
auth_asym_id
VHH
IGHV3
N.A.
F
N.A.
EVQLVESGGGVVRPGRSLRLSCTVSGDIFGMDAIFSFSAMGWYRQAPGNQRELVATMSRAGSTNFADSVKGRFTISRDNAKKTLYLQMNNLKPEDTAVYYCNVPLGPQGNWGQGTQVTVSSAAA
N.A.
EVQLVESGGGVVRPGRSLRLSCTVSGDIFGMDAIFSFSAMGWYRQAPGNQRELVATMSRAGSTNFADSVKGRFTISRDNAKKTLYLQMNNLKPEDTAVYYCNVPLGPQGNWGQGTQVTV
N.A.
13.432551
0
124
0
113
0
119
0
0
nanobody h7
N.A.
lama glama
N.A.
B
protein
hemagglutinin glycoprotein
morbillivirus canis
50
18
0.82
H_only
train
9hbp_I
9hbp
cryo-em structure of the canine distemper virus tetrameric attachment h glycoprotein in complex with two different nanobodies
no
viral protein
2024-11-07
2026-01-21
electron microscopy
4.3
N.A.
N.A.
41501035
10.1038/s41467-025-67600-z
0
auth_asym_id
VHH
IGHV3
N.A.
I
N.A.
EVQLVESGGGVVRPGRSLRLSCTVSGDIFGMDAIFSFSAMGWYRQAPGNQRELVATMSRAGSTNFADSVKGRFTISRDNAKKTLYLQMNNLKPEDTAVYYCNVPLGPQGNWGQGTQVTVSSAAA
N.A.
EVQLVESGGGVVRPGRSLRLSCTVSGDIFGMDAIFSFSAMGWYRQAPGNQRELVATMSRAGSTNFADSVKGRFTISRDNAKKTLYLQMNNLKPEDTAVYYCNVPLGPQGNWGQGTQVTVSSA
N.A.
14.023671
0
124
0
118
0
122
0
0
nanobody h7
N.A.
lama glama
N.A.
C
protein
hemagglutinin glycoprotein
morbillivirus canis
53
21
0.84
H_only
train
9hbp_K
9hbp
cryo-em structure of the canine distemper virus tetrameric attachment h glycoprotein in complex with two different nanobodies
no
viral protein
2024-11-07
2026-01-21
electron microscopy
4.3
N.A.
N.A.
41501035
10.1038/s41467-025-67600-z
0
auth_asym_id
VHH
IGHV3
N.A.
K
N.A.
EVQLVESGGGLVQAGGSLRLTCAASGSIFSINTMGWYRQAPGKERELVATITSGGSTKYADSVKDRFIISRDKRKNTVYLQMNSLKPEDTAVYVCNARIRPYIYSALQPENDYWGQGTQVTVSSAAA
N.A.
EVQLVESGGGLVQAGGSLRLTCAASGSIFSINTMGWYRQAPGKERELVATITSGGSTKYADSVKDRFIISRDKRKNTVYLQMNSLKPEDTAVYVCNARIRPYIYSALQPENDYWGQGTQVTVSSA
N.A.
15.118924
0
127
0
115
0
125
0
0
nanobody h9
N.A.
lama glama
N.A.
C;D
protein;protein
hemagglutinin glycoprotein;hemagglutinin glycoprotein
morbillivirus canis;morbillivirus canis
19;27
8;10
1.0;0.77
H_only
train
9hbp_L
9hbp
cryo-em structure of the canine distemper virus tetrameric attachment h glycoprotein in complex with two different nanobodies
no
viral protein
2024-11-07
2026-01-21
electron microscopy
4.3
N.A.
N.A.
41501035
10.1038/s41467-025-67600-z
0
auth_asym_id
VHH
IGHV3
N.A.
L
N.A.
EVQLVESGGGLVQAGGSLRLTCAASGSIFSINTMGWYRQAPGKERELVATITSGGSTKYADSVKDRFIISRDKRKNTVYLQMNSLKPEDTAVYVCNARIRPYIYSALQPENDYWGQGTQVTVSSAAA
N.A.
EVQLVESGGGLVQAGGSLRLTCAASGSIFSINTMGWYRQAPGKERELVATITSGGSTKYADSVKDRFIISRDKRKNTVYLQMNSLKPEDTAVYVCNARIRPYIYSALQPENDYWGQGTQVTVS
N.A.
14.927072
0
127
0
115
0
123
0
0
nanobody h9
N.A.
lama glama
N.A.
C;D
protein;protein
hemagglutinin glycoprotein;hemagglutinin glycoprotein
morbillivirus canis;morbillivirus canis
30;19
9;8
0.69;1.0
H_only
train
9hbp_J
9hbp
cryo-em structure of the canine distemper virus tetrameric attachment h glycoprotein in complex with two different nanobodies
no
viral protein
2024-11-07
2026-01-21
electron microscopy
4.3
N.A.
N.A.
41501035
10.1038/s41467-025-67600-z
0
auth_asym_id
VHH
IGHV3
N.A.
J
N.A.
EVQLVESGGGVVRPGRSLRLSCTVSGDIFGMDAIFSFSAMGWYRQAPGNQRELVATMSRAGSTNFADSVKGRFTISRDNAKKTLYLQMNNLKPEDTAVYYCNVPLGPQGNWGQGTQVTVSSAAA
N.A.
EVQLVESGGGVVRPGRSLRLSCTVSGDIFGMDAIFSFSAMGWYRQAPGNQRELVATMSRAGSTNFADSVKGRFTISRDNAKKTLYLQMNNLKPEDTAVYYCNVPLGPQGNWGQGTQVTV
N.A.
13.454705
0
124
0
108
0
119
0
0
nanobody h7
N.A.
lama glama
N.A.
D
protein
hemagglutinin glycoprotein
morbillivirus canis
53
18
0.82
H_only
train
9kgk_B
9kgk
structure of the complex of lgr4 with nb18
no
membrane protein
2024-11-08
2025-07-16
electron microscopy
2.63
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
MKYLLPTAAAGLLLLAAQPAMAQVQLQESGGGSVQAGGSLRLSCAASGYTYSRTCMAWFRQAPGKEREGIATINSDGTTTYADSVKGRFTISRDNAKNTLSLQMNSLKPEDTAMYYCAAASLSTRGCSRAEWEYRYWGQGTQVTVSSAAAYPYDVPDYGSHHHHHH
N.A.
QVQLQESGGGSVQAGGSLRLSCAASGYTYSRTCMAWFRQAPGKEREGIATINSDGTTTYADSVKGRFTISRDNAKNTLSLQMNSLKPEDTAMYYCAAASLSTRGCSRAEWEYRYWGQGTQVTVSS
N.A.
13.705007
0
166
0
125
0
125
0
0
nb18
N.A.
camelus dromedarius
N.A.
A
protein
leucine-rich repeat-containing g-protein coupled receptor 4
homo sapiens
45
17
0.94
H_only
train
9kgk_E
9kgk
structure of the complex of lgr4 with nb18
no
membrane protein
2024-11-08
2025-07-16
electron microscopy
2.63
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VHH
IGHV3
N.A.
E
N.A.
QVQLVESGGGLVNSKGEKLEAHVTTSKYGSLRLSCAASGYTYSPYCMGWFRQAPGKAREGVATVDLDGSTIYADSVKGRFTISQDNAKNTLYLQMNSLKPEDTAMYYCASRTRAGVTCGLNWAIFSYWGQGTQVTVSSHHHHHHEPEA
N.A.
VQLVESGGGLVNSKGEKLEAHVTTSKYGSLRLSCAASGYTYSPYCMGWFRQAPGKAREGVATVDLDGSTIYADSVKGRFTISQDNAKNTLYLQMNSLKPEDTAMYYCASRTRAGVTCGLNWAIFSYWGQGTQVTVS
N.A.
13.355578
0
148
0
114
0
136
0
0
mb52
N.A.
camelus dromedarius
N.A.
A
protein
leucine-rich repeat-containing g-protein coupled receptor 4
homo sapiens
37
11
0.65
H_only
train
9e9s_N
9e9s
cryo-em structure of the pgd2-bound prostaglandin d2 receptor (dp1)-gs complex
yes
membrane protein
2024-11-08
2025-09-03
electron microscopy
2.68
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
MQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
13.80034
0
139
0
128
0
128
0
0
nanobody35
N.A.
lama glama
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
50;31
16;11
0.64;0.73
H_only
train
9khh_A
9khh
structure of the complex of lgr4 with norrin (2:2)
no
membrane protein
2024-11-10
2025-07-16
electron microscopy
3.65
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH
IGHV3
N.A.
A
N.A.
MKKIWLALAGLVLAFSASAQVQLVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRASGGGSGGGGSGKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQ...
N.A.
GSLRLSCAASGYTYSPYCMGWFRQAPGKAREGVATVDLDGSTIYADSVKGRFTISQDNAKNTLYLQMNSLKPEDTAMYYCASRTRAGVTCGLNWAIFSYWGQGTQVTVS
N.A.
13.291
0
556
0
109
0
109
0
0
mb52
N.A.
camelus dromedarius
N.A.
C
protein
leucine-rich repeat-containing g-protein coupled receptor 4
homo sapiens
39
12
0.63
H_only
train
9khh_B
9khh
structure of the complex of lgr4 with norrin (2:2)
no
membrane protein
2024-11-10
2025-07-16
electron microscopy
3.65
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH
IGHV3
N.A.
B
N.A.
MKKIWLALAGLVLAFSASAQVQLVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRASGGGSGGGGSGKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQ...
N.A.
GSLRLSCAASGYTYSPYCMGWFRQAPGKAREGVATVDLDGSTIYADSVKGRFTISQDNAKNTLYLQMNSLKPEDTAMYYCASRTRAGVTCGLNWAIFSYWGQGTQVTVS
N.A.
13.291
0
556
0
109
0
109
0
0
mb52
N.A.
camelus dromedarius
N.A.
D
protein
leucine-rich repeat-containing g-protein coupled receptor 4
homo sapiens
39
12
0.63
H_only
train
9ea9_C
9ea9
crystal structure of bont/a-ntnh-ha70 -vhh_f12-vhh_h7-fab_ntnh complex
yes
toxin/immune system
2024-11-10
2025-09-17
x-ray diffraction
2.93
0.308
0.286
40864694
10.1126/sciadv.adx5831
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
QVQLVESGGGLVQPGGSLRLSCAASGFTLGSRYMSWVRQAPGEGFEWVSSIEPSGTAWDGDSAKGRFTTSRDDAKNTLYLQMSNLQPEDTGVYYCATGYRTDTRIPGGSWGQGTQVTVSSEPKTPKPQ
N.A.
VQLVESGGGLVQPGGSLRLSCAASGFTLGSRYMSWVRQAPGEGFEWVSSIEPSGTAWDGDSAKGRFTTSRDDAKNTLYLQMSNLQPEDTGVYYCATGYRTDTRIPGGSWGQGTQVTV
N.A.
13.121521
0
128
0
117
0
117
0
0
nanobody cia-f12
N.A.
vicugna pacos
N.A.
A
protein
botulinum neurotoxin type a
clostridium botulinum
33
14
0.82
H_only
train
9ea9_F
9ea9
crystal structure of bont/a-ntnh-ha70 -vhh_f12-vhh_h7-fab_ntnh complex
yes
toxin/immune system
2024-11-10
2025-09-17
x-ray diffraction
2.93
0.308
0.286
40864694
10.1126/sciadv.adx5831
0
auth_asym_id
VHH
IGHV3
N.A.
F
N.A.
QVQLVESGGGLVQVGGSLRLSCVVSGSDISGIAMGWYRQAPGKRREMVADIFSGGSTDYAGSVKGRFTISRDNAKKTSYLQMNNVKPEDTGVYYCRLYGSGDYWGQGTQVTVSSAHHSEDP
N.A.
QVQLVESGGGLVQVGGSLRLSCVVSGSDISGIAMGWYRQAPGKRREMVADIFSGGSTDYAGSVKGRFTISRDNAKKTSYLQMNNVKPEDTGVYYCRLYGSGDYWGQGTQVTVSS
N.A.
13.26688
0
121
0
114
0
114
0
0
nanobody cia-h7
N.A.
vicugna pacos
N.A.
A
protein
botulinum neurotoxin type a
clostridium botulinum
66
14
0.44
H_only
train
9ea9_M_K
9ea9
crystal structure of bont/a-ntnh-ha70 -vhh_f12-vhh_h7-fab_ntnh complex
yes
toxin/immune system
2024-11-10
2025-09-17
x-ray diffraction
2.93
0.308
0.286
40864694
10.1126/sciadv.adx5831
0
auth_asym_id
VH:VL
IGHV1
IGKV3
M
K
QVQLQQSGAELARPGTSVKLSCKASGYTFTTYWIQWVKQRPGQGLEWIGTIYPGDGDTRYTQKFKGKATLTADKSSSTAYMQLISLASEDSAVYYCVAGYDTSGTMGYWGQGTSVTV
DIVLTQSPATLSVTPGDDVSLSCRASQSISNNLHWYQQKSHESPRLLIKYASQSISGIPSKFGRGSGTDFTLIINRVETEDFGVYFCQQSDSWPYTFGGTKLEII
QVQLQQSGAELARPGTSVKLSCKASGYTFTTYWIQWVKQRPGQGLEWIGTIYPGDGDTRYTQKFKGKATLTADKSSSTAYMQLISLASEDSAVYYCVAGYDTSGTMGYWGQGTSVTV
DIVLTQSPATLSVTPGDDVSLSCRASQSISNNLHWYQQKSHESPRLLIKYASQSISGIPSKFGRGSGTDFTLIINRVETEDFGVYFCQQSDSWPYTFGGTKLEII
13.578938
13.27576
117
105
117
105
117
105
41
anti-ntnh fab
anti-ntnh fab
mus sp.
mus sp.
B
protein
non-toxic nonhemagglutinin type a
clostridium botulinum
34
16
0.89
HL
train
9eah_B
9eah
structure of nanobody at209 in complex with the olmesartan-bound angiotensin ii type i receptor (at1r)
yes
membrane protein
2024-11-11
2025-03-05
electron microscopy
3.1
N.A.
N.A.
40067891
10.1073/pnas.2423931122
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
QVQLQESGGGLVQAGGSLRLSCAASGYIFYRYSMGWYRQAPGKEREFVAGISYGATTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAWGGRTLYFVYWGQGTQVTVSSGGSGEDQVDPRLIDGKILNSSTEDGIKRIQDDCPKAGRHNYIFVMIPTLYSIIFVVGIFGNSLVVIVIYFYMKLKTVASVFLLNLALADLCFLLTLPLWAVYTAMEYRWPFGNYLCKIASASVSFNLYASVFLLTCLSIDRYLAIVHPMKSRLRRTMLVAKVTCIIIWLLAGLASLPAIIHRNVFFIENTNITVCAFHYESQ...
N.A.
SLRLSCAASGYIFYRYSMGWYRQAPGKEREFVAGISYGATTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAWGGRTLYFVYWGQGTQV
N.A.
13.169786
0
580
0
96
0
98
0
0
nanobody at209,type-1 angiotensin ii receptor,soluble cytochrome b562
N.A.
camelidae
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
9eah_C_D
9eah
structure of nanobody at209 in complex with the olmesartan-bound angiotensin ii type i receptor (at1r)
yes
membrane protein
2024-11-11
2025-03-05
electron microscopy
3.1
N.A.
N.A.
40067891
10.1073/pnas.2423931122
0
auth_asym_id
VH:VL
IGHV3
IGKV1
C
D
EISEVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTV
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEI
13.877992
13.183492
231
215
121
107
121
107
51
bag2 anti-bril fab heavy chain
bag2 anti-bril fab light chain
synthetic construct
synthetic construct
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
9eaj_B
9eaj
structure of nanobody at206 in complex with the angiotensin ii type i receptor (at1r)
yes
membrane protein
2024-11-11
2025-03-05
electron microscopy
3.2
N.A.
N.A.
40067891
10.1073/pnas.2423931122
0
auth_asym_id
VHH
N.A.
N.A.
B
N.A.
QVQLQESGGGLVQAGGSLRLSCAASGSISYYRMGWYRQAPGKEREFVAGIGVGTTTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAYNYFPRSIVYYYVYWGQGTQVTVSSGGSGEDQVDPRLIDGKILNSSTEDGIKRIQDDCPKAGRHNYIFVMIPTLYSIIFVVGIFGNSLVVIVIYFYMKLKTVASVFLLNLALADLCFLLTLPLWAVYTAMEYRWPFGNYLCKIASASVSFNLYASVFLLTCLSIDRYLAIVHPMKSRLRRTMLVAKVTCIIIWLLAGLASLPAIIHRNVFFIENTNITVCAFHY...
N.A.
SYYRMGWYRQAPGKEREFVAGIGVGTTTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAYNYFPRSIVYYYVYWGQGTQV
N.A.
12.985908
0
583
0
66
0
89
0
0
nanobody at206,type-1 angiotensin ii receptor,soluble cytochrome b562
N.A.
camelidae
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
9eaj_C_D
9eaj
structure of nanobody at206 in complex with the angiotensin ii type i receptor (at1r)
yes
membrane protein
2024-11-11
2025-03-05
electron microscopy
3.2
N.A.
N.A.
40067891
10.1073/pnas.2423931122
0
auth_asym_id
VH:VL
IGHV3
IGKV1
C
D
EISEVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTV
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKR
13.933899
13.519763
231
215
122
109
122
109
54
bag2 anti-bril fab heavy chain
bag2 anti-bril fab light chain
synthetic construct
synthetic construct
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
9hco_H_L
9hco
outward-open structure of human serotonin transporter bound to vilazodone
no
membrane protein
2024-11-11
2025-09-17
electron microscopy
2.78
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV1
IGKV7
H
L
QVQLQQSGPELVKLGASVRISCKASGYRFSYSWMNWVKQRPGKGLEWIGRIYPGDGDTKYSGKFKGKATLTADKSSSTVYMQLSSLTSEDSAVYFCARSAYGSEGFAMDYWGQGTSVTVSSAKTTAPSVFPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSGLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKLVPRGSHHHHHH
DIVLTQSPASLAVSLGQRATISCRASESVDNYGISFLNWFQQKPGQPPKLLIYAASNQGSGVPARFSGSGSGTYFSLNIHPMEEDDTAVYFCQQTKGVSWTFGGGTKVEIKRADAAPTVSVFPPSSEQLTSGGASVVCFLNNFYPRDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRG
QVQLQQSGPELVKLGASVRISCKASGYRFSYSWMNWVKQRPGKGLEWIGRIYPGDGDTKYSGKFKGKATLTADKSSSTVYMQLSSLTSEDSAVYFCARSAYGSEGFAMDYWGQGTSVT
DIVLTQSPASLAVSLGQRATISCRASESVDNYGISFLNWFQQKPGQPPKLLIYAASNQGSGVPARFSGSGSGTYFSLNIHPMEEDDTAVYFCQQTKGVSWTFGGGTKVEI
13.578791
13.252435
229
216
118
110
118
110
49
15b8 fab heavy chain
15b8 fab light chain
mus musculus
mus musculus
A
protein
sodium-dependent serotonin transporter
homo sapiens
37
14
0.82
HL
train
9ebn_N
9ebn
peptide 1 (glp-1 (aib16, acpc18)) bound to glp-1r/gs complex
yes
membrane protein
2024-11-12
2025-03-26
electron microscopy
3.44
N.A.
N.A.
40168114
10.1073/pnas.2407574122
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
VQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV
N.A.
13.831202
0
128
0
125
0
125
0
0
nanobody35
N.A.
lama glama
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
41;26
12;11
0.63;0.79
H_only
train
9ebo_N
9ebo
peptide 2 (glp-1 (acpc18)) bound to glp-1r/gs complex (conformer 1)
yes
membrane protein
2024-11-12
2025-03-26
electron microscopy
3.13
N.A.
N.A.
40168114
10.1073/pnas.2407574122
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV
N.A.
13.814609
0
128
0
126
0
126
0
0
nanobody35
N.A.
lama glama
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
46;26
12;11
0.52;0.85
H_only
train
9ebq_N
9ebq
peptide 2 (glp-1 (acpc18)) bound to glp-1r/gs complex (conformer 2)
yes
membrane protein
2024-11-12
2025-03-26
electron microscopy
3.16
N.A.
N.A.
40168114
10.1073/pnas.2407574122
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
VQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV
N.A.
13.770737
0
128
0
125
0
125
0
0
nanobody35
N.A.
lama glama
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
42;27
12;11
0.55;0.79
H_only
train
9ebh_E
9ebh
human adenosine a3 receptor gi1 complex bound to adenosine
yes
membrane protein
2024-11-12
2025-08-20
electron microscopy
3.6
N.A.
N.A.
40825947
10.1038/s41467-025-62872-x
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.400684
0
248
0
230
0
246
0
0
antibody fragment scfv16
N.A.
mus musculus
N.A.
B;A
protein;protein
guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1
homo sapiens;homo sapiens
23;33
9;22
0.82;1.0
H_only
train
9ebi_N
9ebi
human adenosine a3 receptor gi complex (mini-gsi chimera) bound to piclidenoson (cf101, ib-meca)
no
membrane protein
2024-11-12
2025-08-20
electron microscopy
3.6
N.A.
N.A.
40825947
10.1038/s41467-025-62872-x
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
13.527247
0
128
0
128
0
128
0
0
nb35
N.A.
lama glama
N.A.
A;B
protein;protein
mini-gs/i chimera;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
50;34
14;11
0.56;0.69
H_only
train
9eb9_E
9eb9
human trpml1 bound to sybody94
no
membrane protein
2024-11-12
2026-01-21
electron microscopy
3
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH
IGHV3
N.A.
E
N.A.
GSSSQVQLVESGGGLVQAGGSLRLSCAASGFPVYHHFMRWYRQAPGKEREWVAAIHSEGQTTEYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCYVMVGQWYHGQGTQVTVSAGRAGEQKLISEEDLNSAVDHHHHHH
N.A.
GSSSQVQLVESGGGLVQAGGSLRLSCAASGFPVYHHFMRWYRQAPGKEREWVAAIHSEGQTTEYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCYVMVGQWYHGQGTQVTV
N.A.
13.698789
0
144
0
117
0
117
0
0
sybody94
N.A.
synthetic construct
N.A.
A;B
protein;protein
mucolipin-1;mucolipin-1
homo sapiens;homo sapiens
28;46
6;9
0.5;0.41
H_only
train
9eb9_H
9eb9
human trpml1 bound to sybody94
no
membrane protein
2024-11-12
2026-01-21
electron microscopy
3
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH
IGHV3
N.A.
H
N.A.
GSSSQVQLVESGGGLVQAGGSLRLSCAASGFPVYHHFMRWYRQAPGKEREWVAAIHSEGQTTEYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCYVMVGQWYHGQGTQVTVSAGRAGEQKLISEEDLNSAVDHHHHHH
N.A.
GSSSQVQLVESGGGLVQAGGSLRLSCAASGFPVYHHFMRWYRQAPGKEREWVAAIHSEGQTTEYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCYVMVGQWYHGQGTQVTV
N.A.
13.698784
0
144
0
117
0
117
0
0
sybody94
N.A.
synthetic construct
N.A.
A;D
protein;protein
mucolipin-1;mucolipin-1
homo sapiens;homo sapiens
46;27
9;6
0.41;0.55
H_only
train
9eb9_F
9eb9
human trpml1 bound to sybody94
no
membrane protein
2024-11-12
2026-01-21
electron microscopy
3
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH
IGHV3
N.A.
F
N.A.
GSSSQVQLVESGGGLVQAGGSLRLSCAASGFPVYHHFMRWYRQAPGKEREWVAAIHSEGQTTEYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCYVMVGQWYHGQGTQVTVSAGRAGEQKLISEEDLNSAVDHHHHHH
N.A.
GSSSQVQLVESGGGLVQAGGSLRLSCAASGFPVYHHFMRWYRQAPGKEREWVAAIHSEGQTTEYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCYVMVGQWYHGQGTQVTV
N.A.
13.698787
0
144
0
117
0
117
0
0
sybody94
N.A.
synthetic construct
N.A.
B;C
protein;protein
mucolipin-1;mucolipin-1
homo sapiens;homo sapiens
26;46
6;9
0.55;0.41
H_only
train
9eb9_G
9eb9
human trpml1 bound to sybody94
no
membrane protein
2024-11-12
2026-01-21
electron microscopy
3
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH
IGHV3
N.A.
G
N.A.
GSSSQVQLVESGGGLVQAGGSLRLSCAASGFPVYHHFMRWYRQAPGKEREWVAAIHSEGQTTEYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCYVMVGQWYHGQGTQVTVSAGRAGEQKLISEEDLNSAVDHHHHHH
N.A.
GSSSQVQLVESGGGLVQAGGSLRLSCAASGFPVYHHFMRWYRQAPGKEREWVAAIHSEGQTTEYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCYVMVGQWYHGQGTQVTV
N.A.
13.698768
0
144
0
117
0
117
0
0
sybody94
N.A.
synthetic construct
N.A.
C;D
protein;protein
mucolipin-1;mucolipin-1
homo sapiens;homo sapiens
26;46
6;9
0.55;0.41
H_only
train
9kkj_H_L
9kkj
structure of nectin-4 d1 domain in complex with the fab fragment of 9mw2821 mab
no
immune system
2024-11-13
2025-11-19
electron microscopy
3.26
N.A.
N.A.
41101504
10.1016/j.jbc.2025.110816
0
auth_asym_id
FabH:FabL
IGHV4
IGKV4
H
L
EVQLQESGPGLVKPSETLSLTCTVSGFSLIDYGVSWIRQPPGKGLEWIGVIWGGGKIYYNSVLKSRVTISKDNSKSQVSLKLSSVTAADTAVYYCAKQGGLLFYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
DIVMTQSPDSLAVSLGERATINCKSSQSLLNTYSQKNYLAWYQQKPGQPPKLLIYFASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQHYNTPFTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EVQLQESGPGLVKPSETLSLTCTVSGFSLIDYGVSWIRQPPGKGLEWIGVIWGGGKIYYNSVLKSRVTISKDNSKSQVSLKLSSVTAADTAVYYCAKQGGLLFYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
DIVMTQSPDSLAVSLGERATINCKSSQSLLNTYSQKNYLAWYQQKPGQPPKLLIYFASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQHYNTPFTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
20.594572
23.84853
220
218
215
218
220
218
94
9mw2821 mab fab heavy chain
9mw2821 mab fab light chain
mus musculus
mus musculus
A
protein
nectin-4
homo sapiens
46
19
0.95
HL
train
9eci_H_L
9eci
crystal structure of a humanized 5e5 antibody
no
immune system
2024-11-14
2025-04-30
x-ray diffraction
1.57
0.183
0.156
40221891
10.1107/S2059798325002554
0
auth_asym_id
FabH:FabL
IGHV1
IGKV4
H
L
QVQLVQSGAEVKKTGSSVKVSCKASGYTFTDHAIHWVRQAPGQALEWMGHFSPGNTDIKYNDKFKGRVTLTVDRSMSTAYMELSSLRSEDTAMYYCKTSTFFFDYWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
DIVMTQSPDSLAVSLGERATINCKSSQSLLNSGDQKNYLTWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQNDYSYPLTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAEVKKTGSSVKVSCKASGYTFTDHAIHWVRQAPGQALEWMGHFSPGNTDIKYNDKFKGRVTLTVDRSMSTAYMELSSLRSEDTAMYYCKTSTFFFDYWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIVMTQSPDSLAVSLGERATINCKSSQSLLNSGDQKNYLTWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQNDYSYPLTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
21.448069
23.45323
219
220
211
219
216
219
92
5e5 fab heavy chain
5e5 fab light chain
synthetic construct
synthetic construct
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
9heo_B
9heo
open-state ryr1 in 0.05% popc micelles, in complex with a nanobody and fkbp
no
transport protein
2024-11-14
2025-09-17
electron microscopy
3.4
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
QVQLQESGGGLMQAGGSLRLSCTASGSIFSINSMGWYRQAPGKQRELVATITSGNSINYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNADRVPNGYNPWGTPNDEYDYWGQGTQVTVS
N.A.
QVQLQESGGGLMQAGGSLRLSCTASGSIFSINSMGWYRQAPGKQRELVATITSGNSINYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNADRVPNGYNPWGTPNDEYDYWGQGTQVTVS
N.A.
13.829869
0
126
0
126
0
126
0
0
nanobody 9657
N.A.
lama glama
N.A.
A
protein
ryanodine receptor 1
oryctolagus cuniculus
69
22
0.67
H_only
train
9heo_D
9heo
open-state ryr1 in 0.05% popc micelles, in complex with a nanobody and fkbp
no
transport protein
2024-11-14
2025-09-17
electron microscopy
3.4
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
QVQLQESGGGLMQAGGSLRLSCTASGSIFSINSMGWYRQAPGKQRELVATITSGNSINYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNADRVPNGYNPWGTPNDEYDYWGQGTQVTVS
N.A.
QVQLQESGGGLMQAGGSLRLSCTASGSIFSINSMGWYRQAPGKQRELVATITSGNSINYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNADRVPNGYNPWGTPNDEYDYWGQGTQVTVS
N.A.
13.79597
0
126
0
126
0
126
0
0
nanobody 9657
N.A.
lama glama
N.A.
C
protein
ryanodine receptor 1
oryctolagus cuniculus
68
22
0.69
H_only
train
9heo_H
9heo
open-state ryr1 in 0.05% popc micelles, in complex with a nanobody and fkbp
no
transport protein
2024-11-14
2025-09-17
electron microscopy
3.4
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VHH
IGHV3
N.A.
H
N.A.
QVQLQESGGGLMQAGGSLRLSCTASGSIFSINSMGWYRQAPGKQRELVATITSGNSINYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNADRVPNGYNPWGTPNDEYDYWGQGTQVTVS
N.A.
QVQLQESGGGLMQAGGSLRLSCTASGSIFSINSMGWYRQAPGKQRELVATITSGNSINYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNADRVPNGYNPWGTPNDEYDYWGQGTQVTVS
N.A.
13.794121
0
126
0
126
0
126
0
0
nanobody 9657
N.A.
lama glama
N.A.
G
protein
ryanodine receptor 1
oryctolagus cuniculus
69
22
0.67
H_only
train
9heo_K
9heo
open-state ryr1 in 0.05% popc micelles, in complex with a nanobody and fkbp
no
transport protein
2024-11-14
2025-09-17
electron microscopy
3.4
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VHH
IGHV3
N.A.
K
N.A.
QVQLQESGGGLMQAGGSLRLSCTASGSIFSINSMGWYRQAPGKQRELVATITSGNSINYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNADRVPNGYNPWGTPNDEYDYWGQGTQVTVS
N.A.
QVQLQESGGGLMQAGGSLRLSCTASGSIFSINSMGWYRQAPGKQRELVATITSGNSINYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNADRVPNGYNPWGTPNDEYDYWGQGTQVTVS
N.A.
13.820605
0
126
0
126
0
126
0
0
nanobody 9657
N.A.
lama glama
N.A.
J
protein
ryanodine receptor 1
oryctolagus cuniculus
69
22
0.69
H_only
train
9ecx_C_D
9ecx
crystal structure of the sars-cov-2 ntd-targeted neutralizing antibody wrair-2008
no
immune system
2024-11-15
2025-08-20
x-ray diffraction
2.67
0.289
0.223
40882161
10.1128/mbio.01036-25
0
auth_asym_id
FabH:FabL
IGHV1
IGKV2
C
D
QVRVVQSGAEVKNPGASVKVSCKVSGYTLTELSIHWVRQAPGNGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSDDTAVYYCATAGAITGTPRNFYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
DIVMTQTPLSSPVTLGQPASISCRSSQSLVHSDGNTYLSWLQQRPGQPPRLLIYKISNRFSGVPDRFSGSGAGTDFTLKISRVEAEDVGVYYCMQVTQFPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVRVVQSGAEVKNPGASVKVSCKVSGYTLTELSIHWVRQAPGNGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSDDTAVYYCATAGAITGTPRNFYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIVMTQTPLSSPVTLGQPASISCRSSQSLVHSDGNTYLSWLQQRPGQPPRLLIYKISNRFSGVPDRFSGSGAGTDFTLKISRVEAEDVGVYYCMQVTQFPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
20.74377
23.896994
231
219
229
218
229
218
106
wrair-2008 fab heavy chain
wrair-2008 fab light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
9ecx_H_L
9ecx
crystal structure of the sars-cov-2 ntd-targeted neutralizing antibody wrair-2008
no
immune system
2024-11-15
2025-08-20
x-ray diffraction
2.67
0.289
0.223
40882161
10.1128/mbio.01036-25
0
auth_asym_id
FabH:FabL
IGHV1
IGKV2
H
L
QVRVVQSGAEVKNPGASVKVSCKVSGYTLTELSIHWVRQAPGNGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSDDTAVYYCATAGAITGTPRNFYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
DIVMTQTPLSSPVTLGQPASISCRSSQSLVHSDGNTYLSWLQQRPGQPPRLLIYKISNRFSGVPDRFSGSGAGTDFTLKISRVEAEDVGVYYCMQVTQFPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVRVVQSGAEVKNPGASVKVSCKVSGYTLTELSIHWVRQAPGNGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSDDTAVYYCATAGAITGTPRNFYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
DIVMTQTPLSSPVTLGQPASISCRSSQSLVHSDGNTYLSWLQQRPGQPPRLLIYKISNRFSGVPDRFSGSGAGTDFTLKISRVEAEDVGVYYCMQVTQFPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
20.68891
23.979387
231
219
231
219
231
219
102
wrair-2008 fab heavy chain
wrair-2008 fab light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
9ecy_H_L
9ecy
crystal structure of the sars-cov-2 ntd-targeted neutralizing antibody wrair-2039
no
immune system
2024-11-15
2025-08-20
x-ray diffraction
1.54
0.194
0.157
40882161
10.1128/mbio.01036-25
0
auth_asym_id
FabH:FabL
IGHV1
IGLV1
H
L
QVQLVQSGAEVKKPGASVKVSCKVSGYMLIELSMHWVRQAPGKGLEWMGGFDPEDAETIYAQEFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCTTGPAVTNRPADYWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS
QSVLTQPPSVSGAPGQRVTISCTGSSSNIGASYDVHWYQQLPGTAPKLLIYANSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSYSVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVQSGAEVKKPGASVKVSCKVSGYMLIELSMHWVRQAPGKGLEWMGGFDPEDAETIYAQEFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCTTGPAVTNRPADYWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS
QSVLTQPPSVSGAPGQRVTISCTGSSSNIGASYDVHWYQQLPGTAPKLLIYANSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSYSVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
20.988092
24.111122
222
218
222
218
222
218
98
wrair-2039 fab heavy chain
wrair-2039 fab light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
9ecz_H_L
9ecz
cryo-em structure of sars-cov-2 spike protein in complex with human neutralizing antibody wrair-2008 (focused refinement of ntd and wrair-2008)
yes
viral protein/immune system
2024-11-15
2025-08-20
electron microscopy
3.89
N.A.
N.A.
40882161
10.1128/mbio.01036-25
0
auth_asym_id
VH:VL
IGHV1
IGKV2
H
L
QVRVVQSGAEVKNPGASVKVSCKVSGYTLTELSIHWVRQAPGNGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSDDTAVYYCATAGAITGTPRNFYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
DIVMTQTPLSSPVTLGQPASISCRSSQSLVHSDGNTYLSWLQQRPGQPPRLLIYKISNRFSGVPDRFSGSGAGTDFTLKISRVEAEDVGVYYCMQVTQFPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVRVVQSGAEVKNPGASVKVSCKVSGYTLTELSIHWVRQAPGNGLEWMGGFDPEDGETIYAQKFQGRVTMTEDTSTDTAYMELSSLRSDDTAVYYCATAGAITGTPRNFYYYYGMDVWGQGTTVTVS
DIVMTQTPLSSPVTLGQPASISCRSSQSLVHSDGNTYLSWLQQRPGQPPRLLIYKISNRFSGVPDRFSGSGAGTDFTLKISRVEAEDVGVYYCMQVTQFPYTFGQGTKLEIKR
15.330005
14.139855
233
219
127
113
127
113
37
wrair-2008 antibody fab heavy chain
wrair-2008 antibody fab light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
37
18
0.82
HL
train
9kmj_H_L
9kmj
taurine bound htaut
no
membrane protein/immune system
2024-11-16
2025-07-02
electron microscopy
3.1
N.A.
N.A.
40601627
10.1073/pnas.2425549122
0
auth_asym_id
VH:VL
IGHV3
IGKV3
H
L
EVQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQSPEKRLEWVAEISSGGRYIYYSDTVTGRFTISRDNARNILHLEMSSLRSEDTAMYYCARGEVRQRGFDYWGQGTTLTVS
ENVLTQSPAIMSTSPGEKVTMTCRASSSVGSSYLHWYQQKSGASPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSVEAEDAATYYCQQFSGYPLTFGSGTKLEMK
EVQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQSPEKRLEWVAEISSGGRYIYYSDTVTGRFTISRDNARNILHLEMSSLRSEDTAMYYCARGEVRQRGFDYWGQGTTLTVS
ENVLTQSPAIMSTSPGEKVTMTCRASSSVGSSYLHWYQQKSGASPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSVEAEDAATYYCQQFSGYPLTFGSGTKLEMK
13.549379
12.944109
118
108
118
108
118
108
50
heavy chain of 9d5 fab
light chain of 9d5 fab
mus musculus
mus musculus
A
protein
sodium- and chloride-dependent taurine transporter
homo sapiens
33
15
0.88
HL
train
9kml_H_L
9kml
apo mtaut in inward open i state
no
membrane protein/immune system
2024-11-16
2025-07-02
electron microscopy
3.11
N.A.
N.A.
40601627
10.1073/pnas.2425549122
0
auth_asym_id
VH:VL
IGHV3
IGKV3
H
L
EVQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQSPEKRLEWVAEISSGGRYIYYSDTVTGRFTISRDNARNILHLEMSSLRSEDTAMYYCARGEVRQRGFDYWGQGTTLTVS
ENVLTQSPAIMSTSPGEKVTMTCRASSSVGSSYLHWYQQKSGASPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSVEAEDAATYYCQQFSGYPLTFGSGTKLEMK
EVQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQSPEKRLEWVAEISSGGRYIYYSDTVTGRFTISRDNARNILHLEMSSLRSEDTAMYYCARGEVRQRGFDYWGQGTTLTVS
ENVLTQSPAIMSTSPGEKVTMTCRASSSVGSSYLHWYQQKSGASPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSVEAEDAATYYCQQFSGYPLTFGSGTKLEMK
13.557062
12.931592
118
108
118
108
118
108
47
heavy chain of 9d5 fab
light chain of 9d5 fab
mus musculus
mus musculus
A
protein
sodium- and chloride-dependent taurine transporter
mus musculus
34
15
0.83
HL
train
9kmm_H_L
9kmm
iaa bound mtaut
no
membrane protein/immune system
2024-11-16
2025-07-02
electron microscopy
3.3
N.A.
N.A.
40601627
10.1073/pnas.2425549122
0
auth_asym_id
VH:VL
IGHV3
IGKV3
H
L
EVQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQSPEKRLEWVAEISSGGRYIYYSDTVTGRFTISRDNARNILHLEMSSLRSEDTAMYYCARGEVRQRGFDYWGQGTTLTVS
ENVLTQSPAIMSTSPGEKVTMTCRASSSVGSSYLHWYQQKSGASPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSVEAEDAATYYCQQFSGYPLTFGSGTKLEMK
EVQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQSPEKRLEWVAEISSGGRYIYYSDTVTGRFTISRDNARNILHLEMSSLRSEDTAMYYCARGEVRQRGFDYWGQGTTLTVS
ENVLTQSPAIMSTSPGEKVTMTCRASSSVGSSYLHWYQQKSGASPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSVEAEDAATYYCQQFSGYPLTFGSGTKLEMK
13.561923
12.943288
118
108
118
108
118
108
52
heavy chain of 9d5 fab
light chain of 9d5 fab
mus musculus
mus musculus
A
protein
sodium- and chloride-dependent taurine transporter
mus musculus
33
15
0.88
HL
train
9kmp_B
9kmp
crp-hcab1 complex
no
immune system
2024-11-16
2025-11-19
electron microscopy
4.1
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH
IGHV3
N.A.
B
N.A.
MADVQLVESGGGLVQAGESLRLSCTASINIAGLAMGWYRQAPGKQRELAALSTNSGTTIYGNSVKGRFTISRDNAKKTVYLQVDSLKPEDTGIYYCNVRFNPDRIYWGQGTQVTVSS
N.A.
VQLVESGGGLVQAGESLRLSCTASINIAGLAMGWYRQAPGKQRELAALSTNSGTTIYGNSVKGRFTISRDNAKKTVYLQVDSLKPEDTGIYYCNVRFNPDRIYWGQGTQVTVSS
N.A.
13.716047
0
117
0
114
0
114
0
0
crp specific recognition heavy chain antibodie 1 (hcab1)
N.A.
vicugna pacos
N.A.
A
protein
c-reactive protein
homo sapiens
37
8
0.47
H_only
train
9kmp_D
9kmp
crp-hcab1 complex
no
immune system
2024-11-16
2025-11-19
electron microscopy
4.1
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH
IGHV3
N.A.
D
N.A.
MADVQLVESGGGLVQAGESLRLSCTASINIAGLAMGWYRQAPGKQRELAALSTNSGTTIYGNSVKGRFTISRDNAKKTVYLQVDSLKPEDTGIYYCNVRFNPDRIYWGQGTQVTVSS
N.A.
VQLVESGGGLVQAGESLRLSCTASINIAGLAMGWYRQAPGKQRELAALSTNSGTTIYGNSVKGRFTISRDNAKKTVYLQVDSLKPEDTGIYYCNVRFNPDRIYWGQGTQVTVSS
N.A.
13.71572
0
117
0
114
0
114
0
0
crp specific recognition heavy chain antibodie 1 (hcab1)
N.A.
vicugna pacos
N.A.
C
protein
c-reactive protein
homo sapiens
37
8
0.47
H_only
train
9kmp_F
9kmp
crp-hcab1 complex
no
immune system
2024-11-16
2025-11-19
electron microscopy
4.1
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH
IGHV3
N.A.
F
N.A.
MADVQLVESGGGLVQAGESLRLSCTASINIAGLAMGWYRQAPGKQRELAALSTNSGTTIYGNSVKGRFTISRDNAKKTVYLQVDSLKPEDTGIYYCNVRFNPDRIYWGQGTQVTVSS
N.A.
VQLVESGGGLVQAGESLRLSCTASINIAGLAMGWYRQAPGKQRELAALSTNSGTTIYGNSVKGRFTISRDNAKKTVYLQVDSLKPEDTGIYYCNVRFNPDRIYWGQGTQVTVSS
N.A.
13.716091
0
117
0
114
0
114
0
0
crp specific recognition heavy chain antibodie 1 (hcab1)
N.A.
vicugna pacos
N.A.
E
protein
c-reactive protein
homo sapiens
37
8
0.47
H_only
train
9kmp_I
9kmp
crp-hcab1 complex
no
immune system
2024-11-16
2025-11-19
electron microscopy
4.1
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH
IGHV3
N.A.
I
N.A.
MADVQLVESGGGLVQAGESLRLSCTASINIAGLAMGWYRQAPGKQRELAALSTNSGTTIYGNSVKGRFTISRDNAKKTVYLQVDSLKPEDTGIYYCNVRFNPDRIYWGQGTQVTVSS
N.A.
VQLVESGGGLVQAGESLRLSCTASINIAGLAMGWYRQAPGKQRELAALSTNSGTTIYGNSVKGRFTISRDNAKKTVYLQVDSLKPEDTGIYYCNVRFNPDRIYWGQGTQVTVSS
N.A.
13.71609
0
117
0
114
0
114
0
0
crp specific recognition heavy chain antibodie 1 (hcab1)
N.A.
vicugna pacos
N.A.
G
protein
c-reactive protein
homo sapiens
37
8
0.47
H_only
train
9kmp_J
9kmp
crp-hcab1 complex
no
immune system
2024-11-16
2025-11-19
electron microscopy
4.1
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH
IGHV3
N.A.
J
N.A.
MADVQLVESGGGLVQAGESLRLSCTASINIAGLAMGWYRQAPGKQRELAALSTNSGTTIYGNSVKGRFTISRDNAKKTVYLQVDSLKPEDTGIYYCNVRFNPDRIYWGQGTQVTVSS
N.A.
VQLVESGGGLVQAGESLRLSCTASINIAGLAMGWYRQAPGKQRELAALSTNSGTTIYGNSVKGRFTISRDNAKKTVYLQVDSLKPEDTGIYYCNVRFNPDRIYWGQGTQVTVSS
N.A.
13.715716
0
117
0
114
0
114
0
0
crp specific recognition heavy chain antibodie 1 (hcab1)
N.A.
vicugna pacos
N.A.
H
protein
c-reactive protein
homo sapiens
37
8
0.47
H_only
train
9ee8_E
9ee8
cryo-em structure of the adenosine a2a receptor intermediate bound to a minigs heterotrimer
yes
signaling protein/immune system
2024-11-18
2025-04-09
electron microscopy
2.63
N.A.
N.A.
39875358
10.1038/s41467-025-56434-4
0
auth_asym_id
VHH
IGHV3
N.A.
E
N.A.
MKYLLPTAAAGLLLLAAQPAMAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
13.899015
0
156
0
128
0
128
0
0
nanobody nb35
N.A.
lama glama
N.A.
B;D
protein;protein
guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(s) subunit alpha isoforms short
homo sapiens;homo sapiens
31;37
11;9
0.69;0.56
H_only
train
9ee9_E
9ee9
cryo-em structure of the adenosine a2a receptor intermediate bound to a minigs heterotrimer
yes
signaling protein/immune system
2024-11-18
2025-04-09
electron microscopy
3.16
N.A.
N.A.
39875358
10.1038/s41467-025-56434-4
0
auth_asym_id
VHH
IGHV3
N.A.
E
N.A.
MKYLLPTAAAGLLLLAAQPAMAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
13.962081
0
156
0
128
0
128
0
0
nanobody nb35
N.A.
lama glama
N.A.
B;D
protein;protein
guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(s) subunit alpha isoforms short
homo sapiens;homo sapiens
33;37
12;9
0.71;0.53
H_only
train
9ee5_H_L
9ee5
cryo-em structure of the ono2550289-bound prostaglandin d2 receptor (dp1)-bril-fab complex
yes
membrane protein/immune system
2024-11-18
2025-09-03
electron microscopy
2.89
N.A.
N.A.
41062467
10.1038/s41467-025-64002-z
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EISEVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
SEVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
24.585524
23.368477
229
214
226
212
226
212
99
anti-bril fab heavy chain
anti-bril fab light chain
synthetic construct
synthetic construct
A
protein
prostaglandin d2 receptor,soluble cytochrome b562
homo sapiens
32
14
0.88
HL
train
9ee5_K
9ee5
cryo-em structure of the ono2550289-bound prostaglandin d2 receptor (dp1)-bril-fab complex
yes
membrane protein/immune system
2024-11-18
2025-09-03
electron microscopy
2.89
N.A.
N.A.
41062467
10.1038/s41467-025-64002-z
0
auth_asym_id
VHH
IGHV3
N.A.
K
N.A.
GSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSS
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS
N.A.
13.915402
0
123
0
120
0
120
0
0
anti-fab nanobody synthetic construct
N.A.
synthetic construct
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
9knw_C
9knw
cryo-em structure of apo human mitochondrial pyruvate carrier in the ims-open conformation at ph 6.8
no
protein transport
2024-11-19
2025-03-12
electron microscopy
3.41
N.A.
N.A.
40101766
10.1038/s41586-025-08873-8
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
EVQLVESGGGLVQAGGSLRLSCAASGFPVTERVMYWYRQAPGKEREWVAAIDSQGSSTYYADSVKGRFTISRDNSKNTVYLQMNSLKPEDTAVYYCKVEVGWGYKGQGTQVTVSSLEHHHHHHHGGSGEQKLISEEDL
N.A.
EVQLVESGGGLVQAGGSLRLSCAASGFPVTERVMYWYRQAPGKEREWVAAIDSQGSSTYYADSVKGRFTISRDNSKNTVYLQMNSLKPEDTAVYYCKVEVGWGYKGQGTQVTVS
N.A.
13.380791
0
138
0
114
0
114
0
0
mpc specific nanobody 1
N.A.
homo sapiens
N.A.
B
protein
mitochondrial pyruvate carrier 2
homo sapiens
35
10
0.53
H_only
train
9knx_C
9knx
cryo-em structure of human mitochondrial pyruvate carrier in the occluded conformation at ph 6.8
no
protein transport
2024-11-19
2025-03-12
electron microscopy
3.72
N.A.
N.A.
40101766
10.1038/s41586-025-08873-8
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
EVQLVESGGGLVQAGGSLRLSCAASGFPVTERVMYWYRQAPGKEREWVAAIDSQGSSTYYADSVKGRFTISRDNSKNTVYLQMNSLKPEDTAVYYCKVEVGWGYKGQGTQVTVSSLEHHHHHHHGGSGEQKLISEEDL
N.A.
EVQLVESGGGLVQAGGSLRLSCAASGFPVTERVMYWYRQAPGKEREWVAAIDSQGSSTYYADSVKGRFTISRDNSKNTVYLQMNSLKPEDTAVYYCKVEVGWGYKGQGTQVTVS
N.A.
13.52155
0
138
0
114
0
114
0
0
mpc specific nanobody 1
N.A.
homo sapiens
N.A.
B
protein
mitochondrial pyruvate carrier 2
homo sapiens
33
11
0.58
H_only
train
9kny_C
9kny
cryo-em structure of pyruvate-treated human mitochondrial pyruvate carrier in the ims-open conformation at ph 8.0
no
protein transport
2024-11-19
2025-03-12
electron microscopy
3.4
N.A.
N.A.
40101766
10.1038/s41586-025-08873-8
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
EVQLVESGGGLVQAGGSLRLSCAASGFPVTERVMYWYRQAPGKEREWVAAIDSQGSSTYYADSVKGRFTISRDNSKNTVYLQMNSLKPEDTAVYYCKVEVGWGYKGQGTQVTVSSLEHHHHHHHGGSGEQKLISEEDL
N.A.
EVQLVESGGGLVQAGGSLRLSCAASGFPVTERVMYWYRQAPGKEREWVAAIDSQGSSTYYADSVKGRFTISRDNSKNTVYLQMNSLKPEDTAVYYCKVEVGWGYKGQGTQVTVS
N.A.
13.381826
0
138
0
114
0
114
0
0
mpc specific nanobody 1
N.A.
homo sapiens
N.A.
B
protein
mitochondrial pyruvate carrier 2
homo sapiens
35
11
0.55
H_only
train
9ko4_H
9ko4
a cryo_em structure of ccr7 complex with ccl21
no
membrane protein/immune system
2024-11-19
2025-11-26
electron microscopy
3.3
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
scFv
N.A.
N.A.
H
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.07477
0
249
0
232
0
247
0
0
scfv16
N.A.
homo sapiens
N.A.
B;A
protein;protein
guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1
homo sapiens;homo sapiens
22;35
9;21
0.75;0.88
H_only
train
9eg6_B
9eg6
crystal structure of the human cavin1 hr1 ht/ii mutant domain bound to nanobody b7
yes
protein transport
2024-11-20
2024-12-04
x-ray diffraction
3.2
0.287
0.258
40260863
10.1242/jcs.263756
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
QVQLQESGGGLVQAGGSLRLSCAVSGIRVNVNAMYWYRQAPGKQRELVAIITTFGSTNYADSAKGRFTISRDNTKNTVYLQMDNLKPEDTAVYYCNAPQFTDRYWGQGTQVTVSSHHHHHH
N.A.
QVQLQESGGGLVQAGGSLRLSCAVSGIRVNVNAMYWYRQAPGKQRELVAIITTFGSTNYADSAKGRFTISRDNTKNTVYLQMDNLKPEDTAVYYCNAPQFTDRYWGQGTQVTVSS
N.A.
13.417146
0
121
0
115
0
115
0
0
nanobody b7
N.A.
vicugna pacos
N.A.
A;C
peptide;peptide
caveolae-associated protein 1;caveolae-associated protein 1
homo sapiens;homo sapiens
24;30
11;8
0.85;0.47
H_only
train
9eg6_F
9eg6
crystal structure of the human cavin1 hr1 ht/ii mutant domain bound to nanobody b7
yes
protein transport
2024-11-20
2024-12-04
x-ray diffraction
3.2
0.287
0.258
40260863
10.1242/jcs.263756
0
auth_asym_id
VHH
IGHV3
N.A.
F
N.A.
QVQLQESGGGLVQAGGSLRLSCAVSGIRVNVNAMYWYRQAPGKQRELVAIITTFGSTNYADSAKGRFTISRDNTKNTVYLQMDNLKPEDTAVYYCNAPQFTDRYWGQGTQVTVSSHHHHHH
N.A.
QVQLQESGGGLVQAGGSLRLSCAVSGIRVNVNAMYWYRQAPGKQRELVAIITTFGSTNYADSAKGRFTISRDNTKNTVYLQMDNLKPEDTAVYYCNAPQFTDRYWGQGTQVTVSS
N.A.
13.430223
0
121
0
115
0
115
0
0
nanobody b7
N.A.
vicugna pacos
N.A.
A;E
peptide;peptide
caveolae-associated protein 1;caveolae-associated protein 1
homo sapiens;homo sapiens
28;22
8;10
0.5;0.83
H_only
train
9eg6_D
9eg6
crystal structure of the human cavin1 hr1 ht/ii mutant domain bound to nanobody b7
yes
protein transport
2024-11-20
2024-12-04
x-ray diffraction
3.2
0.287
0.258
40260863
10.1242/jcs.263756
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
QVQLQESGGGLVQAGGSLRLSCAVSGIRVNVNAMYWYRQAPGKQRELVAIITTFGSTNYADSAKGRFTISRDNTKNTVYLQMDNLKPEDTAVYYCNAPQFTDRYWGQGTQVTVSSHHHHHH
N.A.
QVQLQESGGGLVQAGGSLRLSCAVSGIRVNVNAMYWYRQAPGKQRELVAIITTFGSTNYADSAKGRFTISRDNTKNTVYLQMDNLKPEDTAVYYCNAPQFTDRYWGQGTQVTVSS
N.A.
13.434224
0
121
0
115
0
115
0
0
nanobody b7
N.A.
vicugna pacos
N.A.
C;E
peptide;peptide
caveolae-associated protein 1;caveolae-associated protein 1
homo sapiens;homo sapiens
22;29
10;8
0.83;0.5
H_only
train
9kod_I_J
9kod
neuraminidase of a/dairy cow/minnesota/24_016288-003/2024 (dcmn24 n1) in complex with cav-f6 fab
no
viral protein/immune system
2024-11-20
2025-07-02
electron microscopy
2.95
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV3
IGKV3
I
J
EVQLVESGGGLVQPGGSLRLSCAASGFSFTTYEMNWVRQAPGKGLEWVSHISSRGLVIYYADSVKGRFTMSRDTAKNSLYLQMDSLTVADTAVYYCARHYFDRDWGYSGMDLWGQGTTVTVSS
EVVLTQSPGTLSLSPGERATLSCRASQSLGTNYLAWYQHKPGQSPRLLIDGASTRAIGIPDRFSASGSGTDFTLTVSRLEPEDFAVYYCQHYGNPYTFGQGTKLEIK
EVQLVESGGGLVQPGGSLRLSCAASGFSFTTYEMNWVRQAPGKGLEWVSHISSRGLVIYYADSVKGRFTMSRDTAKNSLYLQMDSLTVADTAVYYCARHYFDRDWGYSGMDLWGQGTTVTVSS
EVVLTQSPGTLSLSPGERATLSCRASQSLGTNYLAWYQHKPGQSPRLLIDGASTRAIGIPDRFSASGSGTDFTLTVSRLEPEDFAVYYCQHYGNPYTFGQGTKLEIK
14.37206
13.237804
123
107
123
107
123
107
39
cav-f6 heavy chain
cav-f6 kappa chain
homo sapiens
homo sapiens
A
protein
neuraminidase
influenza a virus
56
15
0.71
HL
train
9kod_G_H
9kod
neuraminidase of a/dairy cow/minnesota/24_016288-003/2024 (dcmn24 n1) in complex with cav-f6 fab
no
viral protein/immune system
2024-11-20
2025-07-02
electron microscopy
2.95
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV3
IGKV3
G
H
EVQLVESGGGLVQPGGSLRLSCAASGFSFTTYEMNWVRQAPGKGLEWVSHISSRGLVIYYADSVKGRFTMSRDTAKNSLYLQMDSLTVADTAVYYCARHYFDRDWGYSGMDLWGQGTTVTVSS
EVVLTQSPGTLSLSPGERATLSCRASQSLGTNYLAWYQHKPGQSPRLLIDGASTRAIGIPDRFSASGSGTDFTLTVSRLEPEDFAVYYCQHYGNPYTFGQGTKLEIK
EVQLVESGGGLVQPGGSLRLSCAASGFSFTTYEMNWVRQAPGKGLEWVSHISSRGLVIYYADSVKGRFTMSRDTAKNSLYLQMDSLTVADTAVYYCARHYFDRDWGYSGMDLWGQGTTVTVSS
EVVLTQSPGTLSLSPGERATLSCRASQSLGTNYLAWYQHKPGQSPRLLIDGASTRAIGIPDRFSASGSGTDFTLTVSRLEPEDFAVYYCQHYGNPYTFGQGTKLEIK
14.372577
13.265018
123
107
123
107
123
107
39
cav-f6 heavy chain
cav-f6 kappa chain
homo sapiens
homo sapiens
B
protein
neuraminidase
influenza a virus
57
15
0.71
HL
train
9kod_E_F
9kod
neuraminidase of a/dairy cow/minnesota/24_016288-003/2024 (dcmn24 n1) in complex with cav-f6 fab
no
viral protein/immune system
2024-11-20
2025-07-02
electron microscopy
2.95
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV3
IGKV3
E
F
EVQLVESGGGLVQPGGSLRLSCAASGFSFTTYEMNWVRQAPGKGLEWVSHISSRGLVIYYADSVKGRFTMSRDTAKNSLYLQMDSLTVADTAVYYCARHYFDRDWGYSGMDLWGQGTTVTVSS
EVVLTQSPGTLSLSPGERATLSCRASQSLGTNYLAWYQHKPGQSPRLLIDGASTRAIGIPDRFSASGSGTDFTLTVSRLEPEDFAVYYCQHYGNPYTFGQGTKLEIK
EVQLVESGGGLVQPGGSLRLSCAASGFSFTTYEMNWVRQAPGKGLEWVSHISSRGLVIYYADSVKGRFTMSRDTAKNSLYLQMDSLTVADTAVYYCARHYFDRDWGYSGMDLWGQGTTVTVSS
EVVLTQSPGTLSLSPGERATLSCRASQSLGTNYLAWYQHKPGQSPRLLIDGASTRAIGIPDRFSASGSGTDFTLTVSRLEPEDFAVYYCQHYGNPYTFGQGTKLEIK
14.348766
13.247982
123
107
123
107
123
107
38
cav-f6 heavy chain
cav-f6 kappa chain
homo sapiens
homo sapiens
C
protein
neuraminidase
influenza a virus
54
15
0.79
HL
train
9kod_K_L
9kod
neuraminidase of a/dairy cow/minnesota/24_016288-003/2024 (dcmn24 n1) in complex with cav-f6 fab
no
viral protein/immune system
2024-11-20
2025-07-02
electron microscopy
2.95
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV3
IGKV3
K
L
EVQLVESGGGLVQPGGSLRLSCAASGFSFTTYEMNWVRQAPGKGLEWVSHISSRGLVIYYADSVKGRFTMSRDTAKNSLYLQMDSLTVADTAVYYCARHYFDRDWGYSGMDLWGQGTTVTVSS
EVVLTQSPGTLSLSPGERATLSCRASQSLGTNYLAWYQHKPGQSPRLLIDGASTRAIGIPDRFSASGSGTDFTLTVSRLEPEDFAVYYCQHYGNPYTFGQGTKLEIK
EVQLVESGGGLVQPGGSLRLSCAASGFSFTTYEMNWVRQAPGKGLEWVSHISSRGLVIYYADSVKGRFTMSRDTAKNSLYLQMDSLTVADTAVYYCARHYFDRDWGYSGMDLWGQGTTVTVSS
EVVLTQSPGTLSLSPGERATLSCRASQSLGTNYLAWYQHKPGQSPRLLIDGASTRAIGIPDRFSASGSGTDFTLTVSRLEPEDFAVYYCQHYGNPYTFGQGTKLEIK
14.373096
13.230828
123
107
123
107
123
107
38
cav-f6 heavy chain
cav-f6 kappa chain
homo sapiens
homo sapiens
D
protein
neuraminidase
influenza a virus
54
15
0.71
HL
train
9ego_S
9ego
cannabinoid receptor 1-gi complex with novel ligand
no
signaling protein
2024-11-21
2025-04-30
electron microscopy
3.2
N.A.
N.A.
40044644
10.1038/s41467-025-57136-7
0
auth_asym_id
scFv
N.A.
N.A.
S
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAHHHHHHHH
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.997732
0
259
0
232
0
246
0
0
scfv16
N.A.
mus musculus
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
33;18
20;6
0.95;0.75
H_only
train
9hh9_E_D
9hh9
cryo-em structure of vsv-indiana glycoprotein (mudd-summers strain) in its pre-fusion conformation in complex with 8g5f11 fab
no
viral protein
2024-11-21
2025-10-22
electron microscopy
2.93
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV4
IGKV1
E
D
DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWNRQFPGNKLEWMGYIHYSGLTNYNPSLKSRISITRHTSKNQFFLQLNSVTTEDTATYYCVRGGYDGRDYYAMDFWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPSGPISTIN
DIVMTQSHKFMSTSVGDRVSITCKASQDVDNDVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISDVQSEDLSDYFCQQYSSYPFTFGGGTRLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWNRQFPGNKLEWMGYIHYSGLTNYNPSLKSRISITRHTSKNQFFLQLNSVTTEDTATYYCVRGGYDGRDYYAMDFWGQGTSVTVS
DIVMTQSHKFMSTSVGDRVSITCKASQDVDNDVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISDVQSEDLSDYFCQQYSSYPFTFGGGTRLEI
13.967239
13.205192
229
214
121
106
121
106
45
8g5f11 vh
8g5f11 vl
mus sp.
mus sp.
A
protein
glycoprotein
vesicular stomatitis virus
37
18
0.86
HL
train
9hh9_G_F
9hh9
cryo-em structure of vsv-indiana glycoprotein (mudd-summers strain) in its pre-fusion conformation in complex with 8g5f11 fab
no
viral protein
2024-11-21
2025-10-22
electron microscopy
2.93
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV4
IGKV1
G
F
DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWNRQFPGNKLEWMGYIHYSGLTNYNPSLKSRISITRHTSKNQFFLQLNSVTTEDTATYYCVRGGYDGRDYYAMDFWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPSGPISTIN
DIVMTQSHKFMSTSVGDRVSITCKASQDVDNDVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISDVQSEDLSDYFCQQYSSYPFTFGGGTRLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWNRQFPGNKLEWMGYIHYSGLTNYNPSLKSRISITRHTSKNQFFLQLNSVTTEDTATYYCVRGGYDGRDYYAMDFWGQGTSVTVS
DIVMTQSHKFMSTSVGDRVSITCKASQDVDNDVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISDVQSEDLSDYFCQQYSSYPFTFGGGTRLEI
13.983238
13.180706
229
214
121
106
121
106
47
8g5f11 vh
8g5f11 vl
mus sp.
mus sp.
B
protein
glycoprotein
vesicular stomatitis virus
41
22
0.88
HL
train
9hh9_I_H
9hh9
cryo-em structure of vsv-indiana glycoprotein (mudd-summers strain) in its pre-fusion conformation in complex with 8g5f11 fab
no
viral protein
2024-11-21
2025-10-22
electron microscopy
2.93
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV4
IGKV1
I
H
DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWNRQFPGNKLEWMGYIHYSGLTNYNPSLKSRISITRHTSKNQFFLQLNSVTTEDTATYYCVRGGYDGRDYYAMDFWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPSGPISTIN
DIVMTQSHKFMSTSVGDRVSITCKASQDVDNDVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISDVQSEDLSDYFCQQYSSYPFTFGGGTRLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWNRQFPGNKLEWMGYIHYSGLTNYNPSLKSRISITRHTSKNQFFLQLNSVTTEDTATYYCVRGGYDGRDYYAMDFWGQGTSVTVS
DIVMTQSHKFMSTSVGDRVSITCKASQDVDNDVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISDVQSEDLSDYFCQQYSSYPFTFGGGTRLEI
14.005588
13.328527
229
214
121
106
121
106
50
8g5f11 vh
8g5f11 vl
mus sp.
mus sp.
C
protein
glycoprotein
vesicular stomatitis virus
40
19
0.83
HL
train
9kpd_N
9kpd
cryo-em structure of gpcr16-minigs complex
no
signaling protein
2024-11-22
2025-04-02
electron microscopy
2.84
N.A.
N.A.
40261795
10.1016/j.celrep.2025.115604
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
MQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
13.616231
0
135
0
128
0
128
0
0
nanobody 35
N.A.
homo sapiens
N.A.
B;A
protein;protein
guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(s) subunit alpha isoforms short,guanine nucleotide-binding protein g(s) subunit alpha isoforms short,guanine nucleotide-binding protein g(t) subunit alpha-3
homo sapiens;homo sapiens
31;42
11;12
0.73;0.57
H_only
train
9kpe_S
9kpe
cryo-em structure of gpcr16-gih5 complex
no
signaling protein
2024-11-22
2025-04-02
electron microscopy
3.35
N.A.
N.A.
40261795
10.1016/j.celrep.2025.115604
0
auth_asym_id
scFv
N.A.
N.A.
S
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAENLYFQSHHHHHHHH
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.196173
0
266
0
232
0
246
0
0
scfv16
N.A.
homo sapiens
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
34;23
19;10
0.86;0.83
H_only
train
9hhr_D_G
9hhr
cryo-em structure of vsv-indiana glycoprotein (mudd-summers strain) in its post-fusion conformation in complex with 8g5f11 fab
no
viral protein
2024-11-22
2025-10-29
electron microscopy
2.81
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV4
IGKV1
D
G
DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWNRQFPGNKLEWMGYIHYSGLTNYNPSLKSRISITRHTSKNQFFLQLNSVTTEDTATYYCVRGGYDGRDYYAMDFWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPSGPISTIN
DIVMTQSHKFMSTSVGDRVSITCKASQDVDNDVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISDVQSEDLSDYFCQQYSSYPFTFGGGTRLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWNRQFPGNKLEWMGYIHYSGLTNYNPSLKSRISITRHTSKNQFFLQLNSVTTEDTATYYCVRGGYDGRDYYAMDFWGQGTSVTVS
DIVMTQSHKFMSTSVGDRVSITCKASQDVDNDVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISDVQSEDLSDYFCQQYSSYPFTFGGGTRLEI
13.967647
13.221839
229
214
121
106
121
106
43
8g5f11 vh
8g5f11 vl
mus sp.
mus sp.
A
protein
glycoprotein
vesicular stomatitis virus
38
17
0.81
HL
train
9hhr_F_E
9hhr
cryo-em structure of vsv-indiana glycoprotein (mudd-summers strain) in its post-fusion conformation in complex with 8g5f11 fab
no
viral protein
2024-11-22
2025-10-29
electron microscopy
2.81
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV4
IGKV1
F
E
DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWNRQFPGNKLEWMGYIHYSGLTNYNPSLKSRISITRHTSKNQFFLQLNSVTTEDTATYYCVRGGYDGRDYYAMDFWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPSGPISTIN
DIVMTQSHKFMSTSVGDRVSITCKASQDVDNDVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISDVQSEDLSDYFCQQYSSYPFTFGGGTRLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWNRQFPGNKLEWMGYIHYSGLTNYNPSLKSRISITRHTSKNQFFLQLNSVTTEDTATYYCVRGGYDGRDYYAMDFWGQGTSVTVS
DIVMTQSHKFMSTSVGDRVSITCKASQDVDNDVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISDVQSEDLSDYFCQQYSSYPFTFGGGTRLEI
14.037884
13.115649
229
214
121
106
121
106
45
8g5f11 vh
8g5f11 vl
mus sp.
mus sp.
B
protein
glycoprotein
vesicular stomatitis virus
40
18
0.78
HL
train
9hhr_L_H
9hhr
cryo-em structure of vsv-indiana glycoprotein (mudd-summers strain) in its post-fusion conformation in complex with 8g5f11 fab
no
viral protein
2024-11-22
2025-10-29
electron microscopy
2.81
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV4
IGKV1
L
H
DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWNRQFPGNKLEWMGYIHYSGLTNYNPSLKSRISITRHTSKNQFFLQLNSVTTEDTATYYCVRGGYDGRDYYAMDFWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPSGPISTIN
DIVMTQSHKFMSTSVGDRVSITCKASQDVDNDVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISDVQSEDLSDYFCQQYSSYPFTFGGGTRLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWNRQFPGNKLEWMGYIHYSGLTNYNPSLKSRISITRHTSKNQFFLQLNSVTTEDTATYYCVRGGYDGRDYYAMDFWGQGTSVTVS
DIVMTQSHKFMSTSVGDRVSITCKASQDVDNDVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISDVQSEDLSDYFCQQYSSYPFTFGGGTRLEI
13.976837
13.137331
229
214
121
106
121
106
53
8g5f11 vh
8g5f11 vl
mus sp.
mus sp.
C
protein
glycoprotein
vesicular stomatitis virus
38
19
0.79
HL
train
9ehm_M_P
9ehm
structure of hiv-1 bg505 sosip.664 env trimer in complex with iomamin5 and 10-1074 broadly neutralizing antibodies - class ii
yes
viral protein/immune system
2024-11-23
2025-05-21
electron microscopy
4.2
N.A.
N.A.
40378041
10.1016/j.celrep.2025.115713
0
auth_asym_id
VH:VL
IGHV4
IGLV3
M
P
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSAS
YVRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLGQP
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSAS
VRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLGQP
16.100561
13.725854
134
110
134
109
134
109
42
10-1074 fab heavy chain
10-1074 fab light chain
homo sapiens
homo sapiens
A
protein
hiv-1 bg505 sosip gp120,envelope glycoprotein gp120
human immunodeficiency virus 1
24
9
0.9
HL
train
9ehm_H_K
9ehm
structure of hiv-1 bg505 sosip.664 env trimer in complex with iomamin5 and 10-1074 broadly neutralizing antibodies - class ii
yes
viral protein/immune system
2024-11-23
2025-05-21
electron microscopy
4.2
N.A.
N.A.
40378041
10.1016/j.celrep.2025.115713
0
auth_asym_id
VH:VL
IGHV1
IGLV2
H
K
QVQLVQSGAQVKKPGASVTVSCTASGYTFTGYHMHWVRQAPGQGLEWMGWINPFRGAVKYAQKFRGRVSMTRDTSIEIFYMELSRLRSDDTAVYYCAREMFDSSADWSPWRGMVAWGQGTLVTVSSAS
QSALTQPASVSGSPGQSITISCTGSSRDVGGFDLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSASKSGNTASLTISGLQAEDEADYYCYSYADGVAFGGGTKLTVLGQP
VQLVQSGAQVKKPGASVTVSCTASGYTFTGYHMHWVRQAPGQGLEWMGWINPFRGAVKYAQKFRGRVSMTRDTSIEIFYMELSRLRSDDTAVYYCAREMFDSSADWSPWRGMVAWGQGTLVTVSSAS
SALTQPASVSGSPGQSITISCTGSSRDVGGFDLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSASKSGNTASLTISGLQAEDEADYYCYSYADGVAFGGGTKLTVLGQP
14.290004
13.180947
128
111
127
110
127
110
39
iomamin5 fab heavy chain
iomamin5 fab light chain
homo sapiens
homo sapiens
B
protein
hiv-1 bg505 sosip gp120,envelope glycoprotein gp120
human immunodeficiency virus 1
52
16
0.67
HL
train
9ehm_N_Q
9ehm
structure of hiv-1 bg505 sosip.664 env trimer in complex with iomamin5 and 10-1074 broadly neutralizing antibodies - class ii
yes
viral protein/immune system
2024-11-23
2025-05-21
electron microscopy
4.2
N.A.
N.A.
40378041
10.1016/j.celrep.2025.115713
0
auth_asym_id
VH:VL
IGHV4
IGLV3
N
Q
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSAS
YVRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLGQP
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSAS
VRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLGQP
16.15816
13.748152
134
110
134
109
134
109
48
10-1074 fab heavy chain
10-1074 fab light chain
homo sapiens
homo sapiens
B
protein
hiv-1 bg505 sosip gp120,envelope glycoprotein gp120
human immunodeficiency virus 1
27
13
0.93
HL
train
9ehm_I_L
9ehm
structure of hiv-1 bg505 sosip.664 env trimer in complex with iomamin5 and 10-1074 broadly neutralizing antibodies - class ii
yes
viral protein/immune system
2024-11-23
2025-05-21
electron microscopy
4.2
N.A.
N.A.
40378041
10.1016/j.celrep.2025.115713
0
auth_asym_id
VH:VL
IGHV1
IGLV2
I
L
QVQLVQSGAQVKKPGASVTVSCTASGYTFTGYHMHWVRQAPGQGLEWMGWINPFRGAVKYAQKFRGRVSMTRDTSIEIFYMELSRLRSDDTAVYYCAREMFDSSADWSPWRGMVAWGQGTLVTVSSAS
QSALTQPASVSGSPGQSITISCTGSSRDVGGFDLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSASKSGNTASLTISGLQAEDEADYYCYSYADGVAFGGGTKLTVLGQP
QVQLVQSGAQVKKPGASVTVSCTASGYTFTGYHMHWVRQAPGQGLEWMGWINPFRGAVKYAQKFRGRVSMTRDTSIEIFYMELSRLRSDDTAVYYCAREMFDSSADWSPWRGMVAWGQGTLVTVSSAS
SALTQPASVSGSPGQSITISCTGSSRDVGGFDLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSASKSGNTASLTISGLQAEDEADYYCYSYADGVAFGGGTKLTVLGQP
14.369328
13.162182
128
111
128
110
128
110
42
iomamin5 fab heavy chain
iomamin5 fab light chain
homo sapiens
homo sapiens
C
protein
hiv-1 bg505 sosip gp120,envelope glycoprotein gp120
human immunodeficiency virus 1
60
18
0.67
HL
train
9ehm_O_R
9ehm
structure of hiv-1 bg505 sosip.664 env trimer in complex with iomamin5 and 10-1074 broadly neutralizing antibodies - class ii
yes
viral protein/immune system
2024-11-23
2025-05-21
electron microscopy
4.2
N.A.
N.A.
40378041
10.1016/j.celrep.2025.115713
0
auth_asym_id
VH:VL
IGHV4
IGLV3
O
R
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSAS
YVRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLGQP
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSAS
VRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLGQP
16.122995
13.742062
134
110
134
109
134
109
45
10-1074 fab heavy chain
10-1074 fab light chain
homo sapiens
homo sapiens
C
protein
hiv-1 bg505 sosip gp120,envelope glycoprotein gp120
human immunodeficiency virus 1
32
16
1
HL
train
9ehs_K
9ehs
structure of a human adenosine a3 receptor complex bound to the covalent antagonist luf7602
yes
signaling protein
2024-11-24
2025-08-20
electron microscopy
3.2
N.A.
N.A.
40825947
10.1038/s41467-025-62872-x
0
auth_asym_id
VHH
IGHV3
N.A.
K
N.A.
HHHHHHGENLYFQGSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSS
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS
N.A.
13.676534
0
136
0
120
0
120
0
0
elbow nanobody
N.A.
synthetic construct
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
9ehs_H_L
9ehs
structure of a human adenosine a3 receptor complex bound to the covalent antagonist luf7602
yes
signaling protein
2024-11-24
2025-08-20
electron microscopy
3.2
N.A.
N.A.
40825947
10.1038/s41467-025-62872-x
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EISEVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
23.384106
22.570595
231
215
225
212
225
212
107
bag2 anti-bril fab heavy chain
bag2 anti-bril fab light chain
synthetic construct
synthetic construct
R
protein
adenosine receptor a3,adenosine a3 receptor fused to bril
homo sapiens
41
17
0.81
HL
train
9hi4_K_L
9hi4
structure of fi6-focused design_03 scaffold in complex with fi6-fab
no
biosynthetic protein
2024-11-24
2025-12-03
x-ray diffraction
2
0.196
0.17
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV4
K
L
QVQLVESGGGVVQPGRSLRLSCAASGFTFSTYAMHWVRQAPGKGLEWVAVISYDANYKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDSQLRSLLYFEWLSQGYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
NSDIVMTQSPDSLAVSLGERATINCKSSQSVTFNYKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQHYRTPPTFGQGTVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVESGGGVVQPGRSLRLSCAASGFTFSTYAMHWVRQAPGKGLEWVAVISYDANYKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDSQLRSLLYFEWLSQGYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
NSDIVMTQSPDSLAVSLGERATINCKSSQSVTFNYKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQHYRTPPTFGQGTVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
23.386528
23.234667
234
219
228
218
231
218
96
fi6 fab heavy chain
fi6 fab light chain
homo sapiens
homo sapiens
C
protein
fi6-focused design_03
bacteroides uniformis atcc 8492
42
17
1
HL
train
9hi4_A_B
9hi4
structure of fi6-focused design_03 scaffold in complex with fi6-fab
no
biosynthetic protein
2024-11-24
2025-12-03
x-ray diffraction
2
0.196
0.17
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV4
A
B
QVQLVESGGGVVQPGRSLRLSCAASGFTFSTYAMHWVRQAPGKGLEWVAVISYDANYKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDSQLRSLLYFEWLSQGYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
NSDIVMTQSPDSLAVSLGERATINCKSSQSVTFNYKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQHYRTPPTFGQGTVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVESGGGVVQPGRSLRLSCAASGFTFSTYAMHWVRQAPGKGLEWVAVISYDANYKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDSQLRSLLYFEWLSQGYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
NSDIVMTQSPDSLAVSLGERATINCKSSQSVTFNYKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQHYRTPPTFGQGTVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
23.58196
23.437845
234
219
227
218
231
218
97
fi6 fab heavy chain
fi6 fab light chain
homo sapiens
homo sapiens
D
protein
fi6-focused design_03
bacteroides uniformis atcc 8492
45
19
1
HL
train
9hi6_H_L
9hi6
structure of scaffold fi6-focused design_04 in complex with fi6-fab
no
biosynthetic protein
2024-11-24
2025-12-03
x-ray diffraction
1.5
0.204
0.177
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV4
H
L
QVQLVESGGGVVQPGRSLRLSCAASGFTFSTYAMHWVRQAPGKGLEWVAVISYDANYKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDSQLRSLLYFEWLSQGYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKG
DIVMTQSPDSLAVSLGERATINCKSSQSVTFNYKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQHYRTPPTFGQGTVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVESGGGVVQPGRSLRLSCAASGFTFSTYAMHWVRQAPGKGLEWVAVISYDANYKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDSQLRSLLYFEWLSQGYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIVMTQSPDSLAVSLGERATINCKSSQSVTFNYKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQHYRTPPTFGQGTVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
22.143673
23.103512
235
217
224
212
230
215
90
fi6 fab heavy chain
fi6-fab light chain
homo sapiens
homo sapiens
A
protein
fi6-focused design_04
bacteroides uniformis atcc 8492
38
15
1
HL
train
9ei9_H_J
9ei9
cryo-em structure of 5e10 fab in complex with h3 influenza victoria 2011 ha trimer
no
immune system
2024-11-25
2025-07-16
electron microscopy
3.89
N.A.
N.A.
40816277
10.1016/j.str.2025.07.015
0
auth_asym_id
VH:VL
IGHV2
IGLV7
H
J
QVTLKESGPGILQPSQTLSLTCSFSGFSLSTFGMGVGWIRQPSGKGLEWLAHIWWDNDEYCNPALKSRLTISKDTSKNHIFLKIANVDTADTATYYCARIFANYGGDAMDYWGQGTSVTVSSA
QAVVTQESALTTSPGGTVILTCRSSTGAVTTSNYANWVQKKPDHLFTGLIGGTSNRVSGVPVRFSGSLIGDKAALTITGAQTEDDAMYFCALWFSTHYVFGGGTKVTVLSQ
QVTLKESGPGILQPSQTLSLTCSFSGFSLSTFGMGVGWIRQPSGKGLEWLAHIWWDNDEYCNPALKSRLTISKDTSKNHIFLKIANVDTADTATYYCARIFANYGGDAMDYWGQGTSVTVSSA
QAVVTQESALTTSPGGTVILTCRSSTGAVTTSNYANWVQKKPDHLFTGLIGGTSNRVSGVPVRFSGSLIGDKAALTITGAQTEDDAMYFCALWFSTHYVFGGGTKVTVLSQ
14.313986
13.565337
123
111
123
111
123
111
47
5e10 fab heavy chain
5e10 fab light chain
mus musculus
mus musculus
B
protein
hemagglutinin ha1
influenza a virus
12
8
1
HL
train
9ei9_A_D
9ei9
cryo-em structure of 5e10 fab in complex with h3 influenza victoria 2011 ha trimer
no
immune system
2024-11-25
2025-07-16
electron microscopy
3.89
N.A.
N.A.
40816277
10.1016/j.str.2025.07.015
0
auth_asym_id
VH:VL
IGHV2
IGLV7
A
D
QVTLKESGPGILQPSQTLSLTCSFSGFSLSTFGMGVGWIRQPSGKGLEWLAHIWWDNDEYCNPALKSRLTISKDTSKNHIFLKIANVDTADTATYYCARIFANYGGDAMDYWGQGTSVTVSSA
QAVVTQESALTTSPGGTVILTCRSSTGAVTTSNYANWVQKKPDHLFTGLIGGTSNRVSGVPVRFSGSLIGDKAALTITGAQTEDDAMYFCALWFSTHYVFGGGTKVTVLSQ
QVTLKESGPGILQPSQTLSLTCSFSGFSLSTFGMGVGWIRQPSGKGLEWLAHIWWDNDEYCNPALKSRLTISKDTSKNHIFLKIANVDTADTATYYCARIFANYGGDAMDYWGQGTSVTVS
QAVVTQESALTTSPGGTVILTCRSSTGAVTTSNYANWVQKKPDHLFTGLIGGTSNRVSGVPVRFSGSLIGDKAALTITGAQTEDDAMYFCALWFSTHYVFGGGTKVTVLS
14.201543
13.555857
123
111
121
110
121
110
48
5e10 fab heavy chain
5e10 fab light chain
mus musculus
mus musculus
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
9ei5_H_L
9ei5
cryo-em structure of apo form of prostaglandin d2 receptor (dp1)-bril-fab complex
yes
membrane protein/immune system
2024-11-25
2025-09-03
electron microscopy
2.84
N.A.
N.A.
41062467
10.1038/s41467-025-64002-z
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EISEVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
EVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
24.5702
23.628916
229
214
225
212
225
212
98
anti-bril fab heavy chain
anti-bril fab light chain
synthetic construct
synthetic construct
A
protein
prostaglandin d2 receptor,soluble cytochrome b562
homo sapiens
32
15
0.88
HL
train
9ei5_K
9ei5
cryo-em structure of apo form of prostaglandin d2 receptor (dp1)-bril-fab complex
yes
membrane protein/immune system
2024-11-25
2025-09-03
electron microscopy
2.84
N.A.
N.A.
41062467
10.1038/s41467-025-64002-z
0
auth_asym_id
VHH
IGHV3
N.A.
K
N.A.
GSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSS
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS
N.A.
14.003868
0
123
0
120
0
120
0
0
anti-fab nanobody synthetic construct
N.A.
synthetic construct
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
9ei0_E
9ei0
human kv1.3 mutant - g427h with a0194009g09 nanobodies
yes
immune system
2024-11-25
2025-12-03
electron microscopy
2.91
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VHH
IGHV3
N.A.
E
N.A.
MEVQLVESGGGLVQAGGSLGLSCSASGLLFSRNSAGWYRQAPGKQREFVARIRMGGSINYADTVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCSSWRTGFYEYWGQGTLVTVSSAAAHHHHHH
N.A.
EVQLVESGGGLVQAGGSLGLSCSASGLLFSRNSAGWYRQAPGKQREFVARIRMGGSINYADTVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCSSWRTGFYEYWGQGTLVTVS
N.A.
13.46655
0
126
0
115
0
115
0
0
a0194009g09 nanobody
N.A.
lama glama
N.A.
A;B
protein;protein
potassium voltage-gated channel subfamily a member 3,green fluorescent protein;potassium voltage-gated channel subfamily a member 3,green fluorescent protein
homo sapiens;homo sapiens
22;26
10;7
0.91;0.54
H_only
train
9ei0_H
9ei0
human kv1.3 mutant - g427h with a0194009g09 nanobodies
yes
immune system
2024-11-25
2025-12-03
electron microscopy
2.91
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VHH
IGHV3
N.A.
H
N.A.
MEVQLVESGGGLVQAGGSLGLSCSASGLLFSRNSAGWYRQAPGKQREFVARIRMGGSINYADTVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCSSWRTGFYEYWGQGTLVTVSSAAAHHHHHH
N.A.
EVQLVESGGGLVQAGGSLGLSCSASGLLFSRNSAGWYRQAPGKQREFVARIRMGGSINYADTVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCSSWRTGFYEYWGQGTLVTVS
N.A.
13.466528
0
126
0
115
0
115
0
0
a0194009g09 nanobody
N.A.
lama glama
N.A.
A;D
protein;protein
potassium voltage-gated channel subfamily a member 3,green fluorescent protein;potassium voltage-gated channel subfamily a member 3,green fluorescent protein
homo sapiens;homo sapiens
26;22
7;10
0.54;0.91
H_only
train
9ei0_F
9ei0
human kv1.3 mutant - g427h with a0194009g09 nanobodies
yes
immune system
2024-11-25
2025-12-03
electron microscopy
2.91
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VHH
IGHV3
N.A.
F
N.A.
MEVQLVESGGGLVQAGGSLGLSCSASGLLFSRNSAGWYRQAPGKQREFVARIRMGGSINYADTVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCSSWRTGFYEYWGQGTLVTVSSAAAHHHHHH
N.A.
EVQLVESGGGLVQAGGSLGLSCSASGLLFSRNSAGWYRQAPGKQREFVARIRMGGSINYADTVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCSSWRTGFYEYWGQGTLVTVS
N.A.
13.466545
0
126
0
115
0
115
0
0
a0194009g09 nanobody
N.A.
lama glama
N.A.
B;C
protein;protein
potassium voltage-gated channel subfamily a member 3,green fluorescent protein;potassium voltage-gated channel subfamily a member 3,green fluorescent protein
homo sapiens;homo sapiens
22;26
10;7
0.91;0.54
H_only
train
9ei0_G
9ei0
human kv1.3 mutant - g427h with a0194009g09 nanobodies
yes
immune system
2024-11-25
2025-12-03
electron microscopy
2.91
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VHH
IGHV3
N.A.
G
N.A.
MEVQLVESGGGLVQAGGSLGLSCSASGLLFSRNSAGWYRQAPGKQREFVARIRMGGSINYADTVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCSSWRTGFYEYWGQGTLVTVSSAAAHHHHHH
N.A.
EVQLVESGGGLVQAGGSLGLSCSASGLLFSRNSAGWYRQAPGKQREFVARIRMGGSINYADTVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCSSWRTGFYEYWGQGTLVTVS
N.A.
13.466539
0
126
0
115
0
115
0
0
a0194009g09 nanobody
N.A.
lama glama
N.A.
C;D
protein;protein
potassium voltage-gated channel subfamily a member 3,green fluorescent protein;potassium voltage-gated channel subfamily a member 3,green fluorescent protein
homo sapiens;homo sapiens
22;26
10;7
0.91;0.54
H_only
train
9eiu_B
9eiu
crystal structure of the human cavin1 hr1 ts/dd mutant domain bound to nanobody b7
yes
protein transport
2024-11-26
2025-02-26
x-ray diffraction
4
0.264
0.203
40260863
10.1242/jcs.263756
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
QVQLQESGGGLVQAGGSLRLSCAVSGIRVNVNAMYWYRQAPGKQRELVAIITTFGSTNYADSAKGRFTISRDNTKNTVYLQMDNLKPEDTAVYYCNAPQFTDRYWGQGTQVTVSSHHHHHH
N.A.
QVQLQESGGGLVQAGGSLRLSCAVSGIRVNVNAMYWYRQAPGKQRELVAIITTFGSTNYADSAKGRFTISRDNTKNTVYLQMDNLKPEDTAVYYCNAPQFTDRYWGQGTQVTVSS
N.A.
13.418888
0
121
0
115
0
115
0
0
nanobody b7
N.A.
vicugna pacos
N.A.
A
peptide
caveolae-associated protein 1
homo sapiens
25
11
0.85
H_only
train
9eit_H_L
9eit
ncs.1 fab in complex with n5 na of a/shorebird/delaware bay/309/2016 (db16, h10n5) -- 4 fabs
no
viral protein
2024-11-26
2025-08-13
electron microscopy
3.35
N.A.
N.A.
40750617
10.1038/s41467-025-62339-z
0
auth_asym_id
VH:VL
IGHV4
IGKV2
H
L
LVKPSETLSLTCSVSGESISSGGYYWTWIRQHPGKGLEWIGNIFDTGSTHYSPSLKTRLTISIDTSKNQFYLRLNSATAADTAVYYCARVGYSLETDRPYYFGLDVWGQGTTVTVSS
DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYTYLDWYLQKPGQSPQLLIYLASNRASGVPDRFSGSGSGTYFTLKISRVEAEDVGVYYCMQAVQTPWTFGQGTKVEIK
LVKPSETLSLTCSVSGESISSGGYYWTWIRQHPGKGLEWIGNIFDTGSTHYSPSLKTRLTISIDTSKNQFYLRLNSATAADTAVYYCARVGYSLETDRPYYFGLDVWGQGTTVTVSS
DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYTYLDWYLQKPGQSPQLLIYLASNRASGVPDRFSGSGSGTYFTLKISRVEAEDVGVYYCMQAVQTPWTFGQGTKVEIK
14.747194
13.744571
117
112
117
112
117
112
51
ncs.1 heavy chain
ncs.1 light chain
homo sapiens
homo sapiens
A
protein
neuraminidase
influenza a virus
54
20
0.95
HL
train