PDB_ID_chain stringlengths 6 10 | PDB_ID stringlengths 4 4 | Title stringlengths 4 230 | Mutation(s) stringclasses 2
values | Classification stringclasses 305
values | Deposit_date stringdate 1976-03-17 00:00:00 2026-01-20 00:00:00 | Release_date stringdate 1976-05-19 00:00:00 2026-02-25 00:00:00 | Method stringclasses 5
values | Resolution stringclasses 459
values | R_free stringclasses 227
values | R_work stringclasses 211
values | PMID stringlengths 4 8 | DOI stringlengths 4 68 | Model_index int64 0 76 | Asym_ID_type stringclasses 2
values | Ab_type stringclasses 30
values | H_subgroup stringclasses 8
values | L_subgroup stringclasses 19
values | H_chain_ID stringclasses 60
values | L_chain_ID stringclasses 58
values | H_fas_seq stringlengths 4 919 | L_fas_seq stringlengths 4 627 | H_filled_pdb_seq stringlengths 4 896 | L_filled_pdb_seq stringlengths 4 523 | H_mean_radius float64 0 79.7 | L_mean_radius float64 0 84.3 | H_fas_seq_len int64 0 919 | L_fas_seq_len int64 0 627 | H_pdb_seq_len int64 0 879 | L_pdb_seq_len int64 0 523 | H_filled_seq_len int64 0 896 | L_filled_seq_len int64 0 523 | HL_inf_res_num int64 0 175 | H_mol_name stringlengths 2 331 | L_mol_name stringlengths 2 151 | H_species stringclasses 68
values | L_species stringclasses 42
values | Ag_chain_ID(s) stringclasses 279
values | Ag_type(s) stringclasses 16
values | Ag_mol_name(s) stringlengths 2 390 | Ag_species stringclasses 743
values | Ab_ag_inf_res_num stringlengths 1 11 | CDR_inf_res_num stringclasses 444
values | CDR_inf_res_ratio stringlengths 1 19 | hl_label stringclasses 3
values | split stringclasses 1
value |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
9eit_I_M | 9eit | ncs.1 fab in complex with n5 na of a/shorebird/delaware bay/309/2016 (db16, h10n5) -- 4 fabs | no | viral protein | 2024-11-26 | 2025-08-13 | electron microscopy | 3.35 | N.A. | N.A. | 40750617 | 10.1038/s41467-025-62339-z | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV2 | I | M | LVKPSETLSLTCSVSGESISSGGYYWTWIRQHPGKGLEWIGNIFDTGSTHYSPSLKTRLTISIDTSKNQFYLRLNSATAADTAVYYCARVGYSLETDRPYYFGLDVWGQGTTVTVSS | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYTYLDWYLQKPGQSPQLLIYLASNRASGVPDRFSGSGSGTYFTLKISRVEAEDVGVYYCMQAVQTPWTFGQGTKVEIK | LVKPSETLSLTCSVSGESISSGGYYWTWIRQHPGKGLEWIGNIFDTGSTHYSPSLKTRLTISIDTSKNQFYLRLNSATAADTAVYYCARVGYSLETDRPYYFGLDVWGQGTTVTVSS | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYTYLDWYLQKPGQSPQLLIYLASNRASGVPDRFSGSGSGTYFTLKISRVEAEDVGVYYCMQAVQTPWTFGQGTKVEIK | 14.738783 | 13.747921 | 117 | 112 | 117 | 112 | 117 | 112 | 48 | ncs.1 heavy chain | ncs.1 light chain | homo sapiens | homo sapiens | D | protein | neuraminidase | influenza a virus | 54 | 21 | 0.95 | HL | train |
9eit_N_O | 9eit | ncs.1 fab in complex with n5 na of a/shorebird/delaware bay/309/2016 (db16, h10n5) -- 4 fabs | no | viral protein | 2024-11-26 | 2025-08-13 | electron microscopy | 3.35 | N.A. | N.A. | 40750617 | 10.1038/s41467-025-62339-z | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV2 | N | O | LVKPSETLSLTCSVSGESISSGGYYWTWIRQHPGKGLEWIGNIFDTGSTHYSPSLKTRLTISIDTSKNQFYLRLNSATAADTAVYYCARVGYSLETDRPYYFGLDVWGQGTTVTVSS | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYTYLDWYLQKPGQSPQLLIYLASNRASGVPDRFSGSGSGTYFTLKISRVEAEDVGVYYCMQAVQTPWTFGQGTKVEIK | LVKPSETLSLTCSVSGESISSGGYYWTWIRQHPGKGLEWIGNIFDTGSTHYSPSLKTRLTISIDTSKNQFYLRLNSATAADTAVYYCARVGYSLETDRPYYFGLDVWGQGTTVTVSS | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYTYLDWYLQKPGQSPQLLIYLASNRASGVPDRFSGSGSGTYFTLKISRVEAEDVGVYYCMQAVQTPWTFGQGTKVEIK | 14.745175 | 13.736967 | 117 | 112 | 117 | 112 | 117 | 112 | 47 | ncs.1 heavy chain | ncs.1 light chain | homo sapiens | homo sapiens | G | protein | neuraminidase | influenza a virus | 54 | 20 | 0.95 | HL | train |
9eit_S_T | 9eit | ncs.1 fab in complex with n5 na of a/shorebird/delaware bay/309/2016 (db16, h10n5) -- 4 fabs | no | viral protein | 2024-11-26 | 2025-08-13 | electron microscopy | 3.35 | N.A. | N.A. | 40750617 | 10.1038/s41467-025-62339-z | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV2 | S | T | LVKPSETLSLTCSVSGESISSGGYYWTWIRQHPGKGLEWIGNIFDTGSTHYSPSLKTRLTISIDTSKNQFYLRLNSATAADTAVYYCARVGYSLETDRPYYFGLDVWGQGTTVTVSS | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYTYLDWYLQKPGQSPQLLIYLASNRASGVPDRFSGSGSGTYFTLKISRVEAEDVGVYYCMQAVQTPWTFGQGTKVEIK | LVKPSETLSLTCSVSGESISSGGYYWTWIRQHPGKGLEWIGNIFDTGSTHYSPSLKTRLTISIDTSKNQFYLRLNSATAADTAVYYCARVGYSLETDRPYYFGLDVWGQGTTVTVSS | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYTYLDWYLQKPGQSPQLLIYLASNRASGVPDRFSGSGSGTYFTLKISRVEAEDVGVYYCMQAVQTPWTFGQGTKVEIK | 14.752282 | 13.750243 | 117 | 112 | 117 | 112 | 117 | 112 | 52 | ncs.1 heavy chain | ncs.1 light chain | homo sapiens | homo sapiens | P | protein | neuraminidase | influenza a virus | 55 | 23 | 0.96 | HL | train |
9eje_H_L | 9eje | ncs.1 fab in complex with n5 na of a/shorebird/delaware bay/309/2016 (db16, h10n5) -- 3 fabs | no | viral protein | 2024-11-27 | 2025-08-13 | electron microscopy | 4.18 | N.A. | N.A. | 40750617 | 10.1038/s41467-025-62339-z | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV2 | H | L | QVQLPESGPRLVKPSETLSLTCSVSGESISSGGYYWTWIRQHPGKGLEWIGNIFDTGSTHYSPSLKTRLTISIDTSKNQFYLRLNSATAADTAVYYCARVGYSLETDRPYYFGLDVWGQGTTVTVSS | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYTYLDWYLQKPGQSPQLLIYLASNRASGVPDRFSGSGSGTYFTLKISRVEAEDVGVYYCMQAVQTPWTFGQGTKVEIK | LVKPSETLSLTCSVSGESISSGGYYWTWIRQHPGKGLEWIGNIFDTGSTHYSPSLKTRLTISIDTSKNQFYLRLNSATAADTAVYYCARVGYSLETDRPYYFGLDVWGQGTTVTVSS | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYTYLDWYLQKPGQSPQLLIYLASNRASGVPDRFSGSGSGTYFTLKISRVEAEDVGVYYCMQAVQTPWTFGQGTKVEIK | 14.751758 | 13.723231 | 127 | 112 | 117 | 112 | 117 | 112 | 50 | ncs.1 heavy chain | ncs.1 light chain | homo sapiens | homo sapiens | A | protein | neuraminidase | influenza a virus | 56 | 18 | 0.75 | HL | train |
9eje_I_M | 9eje | ncs.1 fab in complex with n5 na of a/shorebird/delaware bay/309/2016 (db16, h10n5) -- 3 fabs | no | viral protein | 2024-11-27 | 2025-08-13 | electron microscopy | 4.18 | N.A. | N.A. | 40750617 | 10.1038/s41467-025-62339-z | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV2 | I | M | QVQLPESGPRLVKPSETLSLTCSVSGESISSGGYYWTWIRQHPGKGLEWIGNIFDTGSTHYSPSLKTRLTISIDTSKNQFYLRLNSATAADTAVYYCARVGYSLETDRPYYFGLDVWGQGTTVTVSS | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYTYLDWYLQKPGQSPQLLIYLASNRASGVPDRFSGSGSGTYFTLKISRVEAEDVGVYYCMQAVQTPWTFGQGTKVEIK | LVKPSETLSLTCSVSGESISSGGYYWTWIRQHPGKGLEWIGNIFDTGSTHYSPSLKTRLTISIDTSKNQFYLRLNSATAADTAVYYCARVGYSLETDRPYYFGLDVWGQGTTVTVSS | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYTYLDWYLQKPGQSPQLLIYLASNRASGVPDRFSGSGSGTYFTLKISRVEAEDVGVYYCMQAVQTPWTFGQGTKVEIK | 14.738957 | 13.717644 | 127 | 112 | 117 | 112 | 117 | 112 | 49 | ncs.1 heavy chain | ncs.1 light chain | homo sapiens | homo sapiens | D | protein | neuraminidase | influenza a virus | 55 | 18 | 0.75 | HL | train |
9eje_S_T | 9eje | ncs.1 fab in complex with n5 na of a/shorebird/delaware bay/309/2016 (db16, h10n5) -- 3 fabs | no | viral protein | 2024-11-27 | 2025-08-13 | electron microscopy | 4.18 | N.A. | N.A. | 40750617 | 10.1038/s41467-025-62339-z | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV2 | S | T | QVQLPESGPRLVKPSETLSLTCSVSGESISSGGYYWTWIRQHPGKGLEWIGNIFDTGSTHYSPSLKTRLTISIDTSKNQFYLRLNSATAADTAVYYCARVGYSLETDRPYYFGLDVWGQGTTVTVSS | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYTYLDWYLQKPGQSPQLLIYLASNRASGVPDRFSGSGSGTYFTLKISRVEAEDVGVYYCMQAVQTPWTFGQGTKVEIK | LVKPSETLSLTCSVSGESISSGGYYWTWIRQHPGKGLEWIGNIFDTGSTHYSPSLKTRLTISIDTSKNQFYLRLNSATAADTAVYYCARVGYSLETDRPYYFGLDVWGQGTTVTVSS | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYTYLDWYLQKPGQSPQLLIYLASNRASGVPDRFSGSGSGTYFTLKISRVEAEDVGVYYCMQAVQTPWTFGQGTKVEIK | 14.746071 | 13.726345 | 127 | 112 | 117 | 112 | 117 | 112 | 50 | ncs.1 heavy chain | ncs.1 light chain | homo sapiens | homo sapiens | P | protein | neuraminidase | influenza a virus | 55 | 18 | 0.75 | HL | train |
9ejf_H_L | 9ejf | ncs.1.1 fab in complex with the snap of a/california/04/2009 (ca09, h1n1) -- 4 fabs [c4 reconstruction] | no | viral protein | 2024-11-27 | 2025-08-13 | electron microscopy | 2.29 | N.A. | N.A. | 40750617 | 10.1038/s41467-025-62339-z | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV2 | H | L | QVQLQESGPRLVKPSETLSLTCSVSGESISSGGYYWTWIRQHPGKGLEWIGNIFDTGSTDYSPSLKTRLTISIDTSKNQFYLRLNSATAADTAVYYCARVGFSLETDRPYYLGLDVWGQGTTVTVSS | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYTYLDWYLQKPGQSPQLLISFTSNRASGVPDRFSGSGSGTYFTLKISRVEAEDVGVYYCMQAVQTPWTFGQGTKVEIK | VQLQESGPRLVKPSETLSLTCSVSGESISSGGYYWTWIRQHPGKGLEWIGNIFDTGSTDYSPSLKTRLTISIDTSKNQFYLRLNSATAADTAVYYCARVGFSLETDRPYYLGLDVWGQGTTVTVSS | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYTYLDWYLQKPGQSPQLLISFTSNRASGVPDRFSGSGSGTYFTLKISRVEAEDVGVYYCMQAVQTPWTFGQGTKVEIK | 14.638727 | 13.694981 | 127 | 112 | 126 | 112 | 126 | 112 | 47 | ncs.1.1 heavy chain | ncs.1.1 light chain | homo sapiens | homo sapiens | D | protein | neuraminidase | influenza a virus | 55 | 18 | 0.82 | HL | train |
9ejf_I_M | 9ejf | ncs.1.1 fab in complex with the snap of a/california/04/2009 (ca09, h1n1) -- 4 fabs [c4 reconstruction] | no | viral protein | 2024-11-27 | 2025-08-13 | electron microscopy | 2.29 | N.A. | N.A. | 40750617 | 10.1038/s41467-025-62339-z | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV2 | I | M | QVQLQESGPRLVKPSETLSLTCSVSGESISSGGYYWTWIRQHPGKGLEWIGNIFDTGSTDYSPSLKTRLTISIDTSKNQFYLRLNSATAADTAVYYCARVGFSLETDRPYYLGLDVWGQGTTVTVSS | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYTYLDWYLQKPGQSPQLLISFTSNRASGVPDRFSGSGSGTYFTLKISRVEAEDVGVYYCMQAVQTPWTFGQGTKVEIK | VQLQESGPRLVKPSETLSLTCSVSGESISSGGYYWTWIRQHPGKGLEWIGNIFDTGSTDYSPSLKTRLTISIDTSKNQFYLRLNSATAADTAVYYCARVGFSLETDRPYYLGLDVWGQGTTVTVSS | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYTYLDWYLQKPGQSPQLLISFTSNRASGVPDRFSGSGSGTYFTLKISRVEAEDVGVYYCMQAVQTPWTFGQGTKVEIK | 14.650582 | 13.706955 | 127 | 112 | 126 | 112 | 126 | 112 | 46 | ncs.1.1 heavy chain | ncs.1.1 light chain | homo sapiens | homo sapiens | E | protein | neuraminidase | influenza a virus | 51 | 18 | 0.86 | HL | train |
9ejf_J_N | 9ejf | ncs.1.1 fab in complex with the snap of a/california/04/2009 (ca09, h1n1) -- 4 fabs [c4 reconstruction] | no | viral protein | 2024-11-27 | 2025-08-13 | electron microscopy | 2.29 | N.A. | N.A. | 40750617 | 10.1038/s41467-025-62339-z | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV2 | J | N | QVQLQESGPRLVKPSETLSLTCSVSGESISSGGYYWTWIRQHPGKGLEWIGNIFDTGSTDYSPSLKTRLTISIDTSKNQFYLRLNSATAADTAVYYCARVGFSLETDRPYYLGLDVWGQGTTVTVSS | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYTYLDWYLQKPGQSPQLLISFTSNRASGVPDRFSGSGSGTYFTLKISRVEAEDVGVYYCMQAVQTPWTFGQGTKVEIK | VQLQESGPRLVKPSETLSLTCSVSGESISSGGYYWTWIRQHPGKGLEWIGNIFDTGSTDYSPSLKTRLTISIDTSKNQFYLRLNSATAADTAVYYCARVGFSLETDRPYYLGLDVWGQGTTVTVSS | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYTYLDWYLQKPGQSPQLLISFTSNRASGVPDRFSGSGSGTYFTLKISRVEAEDVGVYYCMQAVQTPWTFGQGTKVEIK | 14.647267 | 13.702736 | 127 | 112 | 126 | 112 | 126 | 112 | 49 | ncs.1.1 heavy chain | ncs.1.1 light chain | homo sapiens | homo sapiens | F | protein | neuraminidase | influenza a virus | 51 | 17 | 0.81 | HL | train |
9ejf_O_P | 9ejf | ncs.1.1 fab in complex with the snap of a/california/04/2009 (ca09, h1n1) -- 4 fabs [c4 reconstruction] | no | viral protein | 2024-11-27 | 2025-08-13 | electron microscopy | 2.29 | N.A. | N.A. | 40750617 | 10.1038/s41467-025-62339-z | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV2 | O | P | QVQLQESGPRLVKPSETLSLTCSVSGESISSGGYYWTWIRQHPGKGLEWIGNIFDTGSTDYSPSLKTRLTISIDTSKNQFYLRLNSATAADTAVYYCARVGFSLETDRPYYLGLDVWGQGTTVTVSS | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYTYLDWYLQKPGQSPQLLISFTSNRASGVPDRFSGSGSGTYFTLKISRVEAEDVGVYYCMQAVQTPWTFGQGTKVEIK | VQLQESGPRLVKPSETLSLTCSVSGESISSGGYYWTWIRQHPGKGLEWIGNIFDTGSTDYSPSLKTRLTISIDTSKNQFYLRLNSATAADTAVYYCARVGFSLETDRPYYLGLDVWGQGTTVTVSS | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYTYLDWYLQKPGQSPQLLISFTSNRASGVPDRFSGSGSGTYFTLKISRVEAEDVGVYYCMQAVQTPWTFGQGTKVEIK | 14.64352 | 13.697507 | 127 | 112 | 126 | 112 | 126 | 112 | 47 | ncs.1.1 heavy chain | ncs.1.1 light chain | homo sapiens | homo sapiens | K | protein | neuraminidase | influenza a virus | 51 | 17 | 0.81 | HL | train |
9ejc_D | 9ejc | cryo-em structure of cxcl1-kshv orf74-gi-scfv16 complex | yes | viral protein/signaling protein | 2024-11-27 | 2025-09-03 | electron microscopy | 2.98 | N.A. | N.A. | 40998787 | 10.1038/s41467-025-63457-4 | 0 | auth_asym_id | scFv | N.A. | N.A. | D | N.A. | METDTLLLWVLLLWVPGSTGDVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAALEVLFQGPHHHHHHHH | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.64566 | 0 | 287 | 0 | 233 | 0 | 247 | 0 | 0 | scfv recombinant mouse monoclonal antibody (scfv16) | N.A. | mus musculus | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1 | homo sapiens;homo sapiens | 25;33 | 11;20 | 0.85;0.91 | H_only | train |
9hjk_B | 9hjk | cryo-em structure of the arabidopsis thaliana cat4 transporter in the outward-open apo state | no | membrane protein | 2024-11-29 | 2025-12-10 | electron microscopy | 3.27 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH | IGHV3 | N.A. | B | N.A. | GSSSQVQLVESGGGLVQAGGSLRLSCAASGFPVNMYWMHWYRQAPGKEREWVAAIQSYGQWTAYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVGVGGYYLGQGTQVTVS | N.A. | QVQLVESGGGLVQAGGSLRLSCAASGFPVNMYWMHWYRQAPGKEREWVAAIQSYGQWTAYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVGVGGYYLGQGTQVTVS | N.A. | 13.325976 | 0 | 118 | 0 | 114 | 0 | 114 | 0 | 0 | sybb5 | N.A. | synthetic construct | N.A. | A | protein | cationic amino acid transporter 4, vacuolar | arabidopsis thaliana | 43 | 12 | 0.55 | H_only | train |
9ejz_H | 9ejz | human m5 muscarinic acetylcholine receptor complex with mini-gq, agonist acetylcholine and positive allosteric modulator vu6007678 | no | membrane protein | 2024-11-30 | 2025-08-13 | electron microscopy | 2.06 | N.A. | N.A. | 40745154 | 10.1038/s41467-025-62212-z | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAHHHHHHHH | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | 17.135414 | 0 | 259 | 0 | 235 | 0 | 248 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein gq chimera;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;rattus norvegicus | 39;27 | 24;11 | 0.89;0.79 | H_only | train |
9ejz_N | 9ejz | human m5 muscarinic acetylcholine receptor complex with mini-gq, agonist acetylcholine and positive allosteric modulator vu6007678 | no | membrane protein | 2024-11-30 | 2025-08-13 | electron microscopy | 2.06 | N.A. | N.A. | 40745154 | 10.1038/s41467-025-62212-z | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | 13.337107 | 0 | 156 | 0 | 126 | 0 | 126 | 0 | 0 | nanobody 35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein gq chimera;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;rattus norvegicus | 48;31 | 13;11 | 0.54;0.73 | H_only | train |
9kt3_H_K | 9kt3 | structure of eg.5.1 s trimer with 2 down-rbds complex with antibody cyfn1006-2. | yes | viral protein/immune system | 2024-12-01 | 2025-01-29 | electron microscopy | 3.63 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | H | K | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | QSALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST | 23.09939 | 24.00099 | 218 | 215 | 218 | 203 | 218 | 203 | 83 | cyfn1006-2 heavy chain | cyfn1006-2 light chain | synthetic construct | escherichia phage t4 | A | protein | spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 39 | 20 | 1 | HL | train |
9kt3_I_L | 9kt3 | structure of eg.5.1 s trimer with 2 down-rbds complex with antibody cyfn1006-2. | yes | viral protein/immune system | 2024-12-01 | 2025-01-29 | electron microscopy | 3.63 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | I | L | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | QSALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST | 23.17665 | 24.210175 | 218 | 215 | 218 | 203 | 218 | 203 | 85 | cyfn1006-2 heavy chain | cyfn1006-2 light chain | synthetic construct | escherichia phage t4 | B | protein | spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 47 | 21 | 0.91 | HL | train |
9kt3_G_J | 9kt3 | structure of eg.5.1 s trimer with 2 down-rbds complex with antibody cyfn1006-2. | yes | viral protein/immune system | 2024-12-01 | 2025-01-29 | electron microscopy | 3.63 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGLV2 | G | J | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | QSALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QMQLVQSGAEVKKPGESLKISCKGSGYTFSYYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLHWSSLKASDTAMYYCARQGDLGDWILLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | SALTQPPSASGSPGQSVTISCTGASSDVGGYNYVSWYQQHPGKAPKLMIYEVNKRPSGVPDRFSGSKSGNTASLTISGLQADDEADYYCCSYALSRVVFGGGTMLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST | 23.7453 | 24.287228 | 218 | 215 | 218 | 203 | 218 | 203 | 93 | cyfn1006-2 heavy chain | cyfn1006-2 light chain | synthetic construct | escherichia phage t4 | C | protein | spike glycoprotein,fibritin,expression tag | severe acute respiratory syndrome coronavirus 2 | 44 | 22 | 0.92 | HL | train |
9hk1_H_L | 9hk1 | pd1 signaling receptor bound to fab complex | no | immunosuppressant | 2024-12-02 | 2025-01-15 | x-ray diffraction | 2.03 | 0.276 | 0.21 | 38354703 | 10.1016/j.immuni.2024.01.007 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | QVQLVQSGAEVKKPGASVKVSCKAFGYTFTTYPIEWMRQAPGKGLEWIGNFHPYNDDTKYNEKFQGRVTLTVDKSSTTVYMELSSLRSEDTAVYYCARENYGSHGGFVYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH | ENQLTQSPSSLSASVGDRVTITCRASSSVISSYLHWYQQKPGKAPKLLIYSTSNLASGVPSRFSGSGSGTDYTLTISSLQPEDFATYYCQQYNSYPLTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKVSCKAFGYTFTTYPIEWMRQAPGKGLEWIGNFHPYNDDTKYNEKFQGRVTLTVDKSSTTVYMELSSLRSEDTAVYYCARENYGSHGGFVYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | ENQLTQSPSSLSASVGDRVTITCRASSSVISSYLHWYQQKPGKAPKLLIYSTSNLASGVPSRFSGSGSGTDYTLTISSLQPEDFATYYCQQYNSYPLTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.513842 | 22.680662 | 227 | 215 | 214 | 212 | 220 | 212 | 95 | antibody fab heavy chain | antibody fab light chain | mus musculus | mus musculus | A | protein | programmed cell death protein 1 | homo sapiens | 44 | 18 | 0.78 | HL | train |
9hk1_I_M | 9hk1 | pd1 signaling receptor bound to fab complex | no | immunosuppressant | 2024-12-02 | 2025-01-15 | x-ray diffraction | 2.03 | 0.276 | 0.21 | 38354703 | 10.1016/j.immuni.2024.01.007 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | I | M | QVQLVQSGAEVKKPGASVKVSCKAFGYTFTTYPIEWMRQAPGKGLEWIGNFHPYNDDTKYNEKFQGRVTLTVDKSSTTVYMELSSLRSEDTAVYYCARENYGSHGGFVYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH | ENQLTQSPSSLSASVGDRVTITCRASSSVISSYLHWYQQKPGKAPKLLIYSTSNLASGVPSRFSGSGSGTDYTLTISSLQPEDFATYYCQQYNSYPLTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKVSCKAFGYTFTTYPIEWMRQAPGKGLEWIGNFHPYNDDTKYNEKFQGRVTLTVDKSSTTVYMELSSLRSEDTAVYYCARENYGSHGGFVYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | ENQLTQSPSSLSASVGDRVTITCRASSSVISSYLHWYQQKPGKAPKLLIYSTSNLASGVPSRFSGSGSGTDYTLTISSLQPEDFATYYCQQYNSYPLTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.44744 | 22.710098 | 227 | 215 | 213 | 212 | 220 | 212 | 94 | antibody fab heavy chain | antibody fab light chain | mus musculus | mus musculus | B | protein | programmed cell death protein 1 | homo sapiens | 43 | 17 | 0.85 | HL | train |
9ekh_H_L | 9ekh | cryo-em structure ono3030297-bound prostaglandin d2 receptor (dp1)-bril-fab complex | yes | membrane protein | 2024-12-02 | 2025-09-03 | electron microscopy | 2.89 | N.A. | N.A. | 41062467 | 10.1038/s41467-025-64002-z | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | EVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 24.710089 | 23.591393 | 229 | 214 | 225 | 212 | 225 | 212 | 92 | anti-bril fab heavy chain | anti-bril fab light chain | synthetic construct | synthetic construct | A | protein | prostaglandin d2 receptor,soluble cytochrome b562 | homo sapiens | 35 | 15 | 0.83 | HL | train |
9ekh_K | 9ekh | cryo-em structure ono3030297-bound prostaglandin d2 receptor (dp1)-bril-fab complex | yes | membrane protein | 2024-12-02 | 2025-09-03 | electron microscopy | 2.89 | N.A. | N.A. | 41062467 | 10.1038/s41467-025-64002-z | 0 | auth_asym_id | VHH | IGHV3 | N.A. | K | N.A. | GSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS | N.A. | 13.9896 | 0 | 123 | 0 | 120 | 0 | 120 | 0 | 0 | anti-fab nanobody | N.A. | synthetic construct | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9kt9_E | 9kt9 | cryo-em structure of hca1-gi complex with 3,5-dhba | yes | signaling protein/immune system | 2024-12-02 | 2025-12-10 | electron microscopy | 2.7 | N.A. | N.A. | 39936872 | 10.1021/acs.jmedchem.4c02567 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | MVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAALEVLFQGPHHHHHHHH | N.A. | MVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.614634 | 0 | 267 | 0 | 233 | 0 | 247 | 0 | 0 | scfv16 | N.A. | homo sapiens | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1 | homo sapiens;homo sapiens | 24;32 | 10;18 | 0.77;0.9 | H_only | train |
9kug_H | 9kug | structure of ep67 bound to human c5ar1 in complex with go | yes | signaling protein | 2024-12-03 | 2025-11-26 | electron microscopy | 3.07 | N.A. | N.A. | 40501890 | 10.1101/2025.05.26.656101 | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.946716 | 0 | 248 | 0 | 233 | 0 | 247 | 0 | 0 | antibody fragment - scfv16 | N.A. | mus musculus | N.A. | B;C | protein;protein | guanine nucleotide-binding protein g(o) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 23;21 | 15;8 | 1.0;0.8 | H_only | train |
9kux_A | 9kux | cryo-em structure of dimeric apjr and one beta-arrestin complex with small molecules | no | signaling protein | 2024-12-04 | 2025-09-17 | electron microscopy | 3.57 | N.A. | N.A. | 40790299 | 10.1038/s41467-025-62870-z | 0 | auth_asym_id | VHVL+ | N.A. | N.A. | A | N.A. | MGDKGTRVFKKASPNGKLTVYLGKRDFVDHIDLVEPVDGVVLVDPEYLKERRVYVTLTAAFRYGREDLDVLGLTFRKDLFVANVQSFPPAPEDKKPLTRLQERLIKKLGEHAYPFTFEIPPNLPSSVTLQPGPEDTGKAIGVDYEVKAFVAENLEEKIHKRNSVRLVIEKVQYAPERPGPQPTAETTRQFLMSDKPLHLEASLDKEIYYHGEPISVNVHVTNNTNKTVKKIKISVRQYADIVLFNTAQYKVPVAMEEADDTVAPSSTFSKVYTLTPFLANNREKRGLALDGKLKHEDTNLASSTLLREGANREILGIIVS... | N.A. | TRVFKKASPNGKLTVYLGKRDFVDHIDLVEPVDGVVLVDPEYLKERRVYVTLTAAFRYGREDLDVLGLTFRKDLFVANVQSFPPAPEDKKPLTRLQERLIKKLGEHAYPFTFEIPPNLPSSVTLQPGPEDTGKAIGVDYEVKAFVAENLEEKIHKRNSVRLVIEKVQYAPERPGPQPTAETTRQFLMSDKPLHLEASLDKEIYYHGEPISVNVHVTNNTNKTVKKIKISVRQYADIVLFNTAQYKVPVAMEEADDTVAPSSTFSKVYTLTPFLANNREKRGLALDGKLKHEDTNLASSTLLREGANREILGIIVSYKVKV... | N.A. | 27.479992 | 0 | 621 | 0 | 578 | 0 | 615 | 0 | 0 | beta arrestin-scfv30 | N.A. | homo sapiens | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9kur_G_D | 9kur | crystal structure of mab ncov400fab with sars-cov-2 n-ctd complex | no | viral protein | 2024-12-04 | 2025-10-15 | x-ray diffraction | 2.06 | 0.249 | 0.199 | 40830575 | 10.1038/s42003-025-08648-x | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | G | D | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSVIYSGGSSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDHLELSAAGSQINYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTSHWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSVIYSGGSSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDHLELSAAGSQINYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTSHWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE | 24.178827 | 22.771236 | 235 | 215 | 220 | 213 | 231 | 213 | 92 | 400fab heavy chain | 400fab light chain | homo sapiens | homo sapiens | A;B | protein;protein | nucleoprotein;nucleoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 39;20 | 23;9 | 0.92;0.9 | HL | train |
9kur_H_L | 9kur | crystal structure of mab ncov400fab with sars-cov-2 n-ctd complex | no | viral protein | 2024-12-04 | 2025-10-15 | x-ray diffraction | 2.06 | 0.249 | 0.199 | 40830575 | 10.1038/s42003-025-08648-x | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | H | L | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSVIYSGGSSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDHLELSAAGSQINYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTSHWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSVIYSGGSSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDHLELSAAGSQINYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | SYELTQPPSVSVSPGQTARITCSGDALPKQYAYWYQQKPGQAPVLVIYKDSERPSGIPERFSGSSSGTTVTLTISGVQAEDEADYYCQSADSSGTSHWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP | 23.769175 | 22.836819 | 235 | 215 | 223 | 211 | 230 | 211 | 88 | 400fab heavy chain | 400fab light chain | homo sapiens | homo sapiens | A;B | protein;protein | nucleoprotein;nucleoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 21;39 | 10;24 | 0.91;0.96 | HL | train |
9kv6_H | 9kv6 | structure of mouse tlqp21 bound to mouse c3ar in complex with go | yes | signaling protein | 2024-12-04 | 2025-11-26 | electron microscopy | 2.88 | N.A. | N.A. | 40501890 | 10.1101/2025.05.26.656101 | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | 17.116497 | 0 | 248 | 0 | 230 | 0 | 248 | 0 | 0 | antibody fragment - scfv16 | N.A. | mus musculus | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(o) subunit alpha | homo sapiens;homo sapiens | 24;32 | 9;21 | 0.75;0.91 | H_only | train |
9kv8_H | 9kv8 | structure of human tlqp21 bound to mouse c3ar in complex with go | yes | signaling protein | 2024-12-04 | 2025-11-26 | electron microscopy | 3.17 | N.A. | N.A. | 40501890 | 10.1101/2025.05.26.656101 | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.058863 | 0 | 248 | 0 | 230 | 0 | 247 | 0 | 0 | antibody fragment - scfv16 | N.A. | mus musculus | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(o) subunit alpha | homo sapiens;homo sapiens | 22;32 | 7;20 | 0.7;0.87 | H_only | train |
9hkq_F | 9hkq | structure of vhh5 targeting ny-eso-1(sllmwitqc)/hla-a*02:01 | no | protein binding | 2024-12-04 | 2025-12-17 | electron microscopy | 3.3 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGNISAVYTMGWYRQAPGKEREFVAAIDYGGSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCASYYHGYWGQGTQVTVSS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGNISAVYTMGWYRQAPGKEREFVAAIDYGGSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCASYYHGYWGQGTQVTVS | N.A. | 13.272627 | 0 | 113 | 0 | 112 | 0 | 112 | 0 | 0 | single domain antibody vhh5 | N.A. | synthetic construct | N.A. | B | protein | mhc class i antigen | homo sapiens | 51 | 10 | 0.4 | H_only | train |
9hkq_D_E | 9hkq | structure of vhh5 targeting ny-eso-1(sllmwitqc)/hla-a*02:01 | no | protein binding | 2024-12-04 | 2025-12-17 | electron microscopy | 3.3 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV2 | IGKV3 | D | E | QVTLKESGPGILQPSQTLSLTCSFSGFSLSTSGMGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLKSRLTISKDTSSNQVFLKITSVDTADTATYYCARVYYGYDGGFFDYWGQGTTLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | QIVLTQSPAIMSASPGEKVTITCSASSSVSYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCHQRSSYPLTFGAGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFN | QVTLKESGPGILQPSQTLSLTCSFSGFSLSTSGMGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLKSRLTISKDTSSNQVFLKITSVDTADTATYYCARVYYGYDGGFFDYWGQGTTLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | QIVLTQSPAIMSASPGEKVTITCSASSSVSYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCHQRSSYPLTFGAGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFN | 22.612492 | 22.281094 | 224 | 209 | 223 | 209 | 224 | 209 | 101 | bm17 antibody heavy chain | bm17 antibody light chain | mus musculus | mus musculus | C | protein | beta-2-microglobulin | homo sapiens | 42 | 19 | 0.83 | HL | train |
9mdz_E | 9mdz | anti-il23r vhh | no | immune system | 2024-12-05 | 2025-05-21 | x-ray diffraction | 1.27 | 0.159 | 0.145 | 40434646 | 10.1073/pnas.2501635122 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGFTFSTYAMAWFRQAPGKEREFVAESWSSGTTYYGASVVGRFTMSRDDSKNTVYLQMNSLRAEDTAVYYCAAKRPDAGWQTYDYWGQGTLVTVSS | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGFTFSTYAMAWFRQAPGKEREFVAESWSSGTTYYGASVVGRFTMSRDDSKNTVYLQMNSLRAEDTAVYYCAAKRPDAGWQTYDYWGQGTLVTVSS | N.A. | 13.587772 | 0 | 120 | 0 | 120 | 0 | 120 | 0 | 0 | anti-il23r vhh | N.A. | lama glama | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9hlw_Q | 9hlw | prostate specific membrane antigen (psma) in complex with nanobody7 | no | membrane protein | 2024-12-05 | 2025-07-16 | electron microscopy | 2.66 | N.A. | N.A. | 40609945 | 10.1016/j.ijbiomac.2025.145693 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | Q | N.A. | QVQLQESGGGSVQAGGSLRLSCTAPGYTDSNYYMSWFRQAPGKEREWVAGVNTGRGSTSYADSVKGRFTISQDNAKNTMFLQMNSLKPEDTAIYYCAVAACHFCDSLPKTQDEYILWGQGTQVTVSSAAAYPYDVPDYGSHHHHHH | N.A. | QVQLQESGGGSVQAGGSLRLSCTAPGYTDSNYYMSWFRQAPGKEREWVAGVNTGRGSTSYADSVKGRFTISQDNAKNTMFLQMNSLKPEDTAIYYCAVAACHFCDSLPKTQDEYILWGQGTQVTVS | N.A. | 13.866686 | 0 | 146 | 0 | 126 | 0 | 126 | 0 | 0 | nano body 7 | N.A. | camelus dromedarius | N.A. | A | protein | glutamate carboxypeptidase 2 | homo sapiens | 43 | 17 | 0.74 | H_only | train |
9hlw_H | 9hlw | prostate specific membrane antigen (psma) in complex with nanobody7 | no | membrane protein | 2024-12-05 | 2025-07-16 | electron microscopy | 2.66 | N.A. | N.A. | 40609945 | 10.1016/j.ijbiomac.2025.145693 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | H | N.A. | QVQLQESGGGSVQAGGSLRLSCTAPGYTDSNYYMSWFRQAPGKEREWVAGVNTGRGSTSYADSVKGRFTISQDNAKNTMFLQMNSLKPEDTAIYYCAVAACHFCDSLPKTQDEYILWGQGTQVTVSSAAAYPYDVPDYGSHHHHHH | N.A. | QVQLQESGGGSVQAGGSLRLSCTAPGYTDSNYYMSWFRQAPGKEREWVAGVNTGRGSTSYADSVKGRFTISQDNAKNTMFLQMNSLKPEDTAIYYCAVAACHFCDSLPKTQDEYILWGQGTQVTVS | N.A. | 13.877554 | 0 | 146 | 0 | 126 | 0 | 126 | 0 | 0 | nano body 7 | N.A. | camelus dromedarius | N.A. | E | protein | glutamate carboxypeptidase 2 | homo sapiens | 41 | 16 | 0.76 | H_only | train |
9kvd_A_B | 9kvd | cryo-em structure of sars-cov-2 prototype spike protein in complex with triple-nab 3g5, 4h5 and 4c11 | no | viral protein/immune system | 2024-12-05 | 2025-08-20 | electron microscopy | 3.44 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | A | B | EVQLVESGGDLVKPGGSLRLSCVASGFTFSRHEMHWVRQAPGEGLEWLSVISETGGTTYYADSVKGRFTISRDNAKNSVFLQMNSLRAEDTAVYFCVRDGGDPAGTVRFFDYWGQGVLVTVSS | DIQMSQSPSSLSASVGDRVTITCRASQGITSFLNWYQKKPGKAPTLLIYSSNRLASAVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQYISFPLTFGGGTKVELK | VQLVESGGDLVKPGGSLRLSCVASGFTFSRHEMHWVRQAPGEGLEWLSVISETGGTTYYADSVKGRFTISRDNAKNSVFLQMNSLRAEDTAVYFCVRDGGDPAGTVRFFDYWGQGVLVTVS | DIQMSQSPSSLSASVGDRVTITCRASQGITSFLNWYQKKPGKAPTLLIYSSNRLASAVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQYISFPLTFGGGTKVELK | 13.857014 | 13.238172 | 123 | 107 | 121 | 107 | 121 | 107 | 41 | the heavy chain of 4c11 | the light chain of 4c11 | macaca mulatta | macaca mulatta | C | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 42 | 20 | 0.87 | HL | train |
9kvd_D_F | 9kvd | cryo-em structure of sars-cov-2 prototype spike protein in complex with triple-nab 3g5, 4h5 and 4c11 | no | viral protein/immune system | 2024-12-05 | 2025-08-20 | electron microscopy | 3.44 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV1 | D | F | QVQLQESGPGLVKPSETLSLTCAVSGGSISSGYGWNWIRQPPGKGLEWVGYIYGSSGSTNYNPSLKNRVTISKDASKNQFSLKVRSVTATDTAIYYCARDTYPSAWSWGYWGQGVLVTVSS | QSVLTQPPSVSGAPGQKVTISCTGSSSNIEVYDVHWYQQLPGTAPKLLIYDNNQRPSGISDRFSGSKSGTSASLAITGLQTEDEADYYCQSYDTSLNAYIFGAGTRLTVL | VQLQESGPGLVKPSETLSLTCAVSGGSISSGYGWNWIRQPPGKGLEWVGYIYGSSGSTNYNPSLKNRVTISKDASKNQFSLKVRSVTATDTAIYYCARDTYPSAWSWGYWGQGVLVTVS | QSVLTQPPSVSGAPGQKVTISCTGSSSNIEVYDVHWYQQLPGTAPKLLIYDNNQRPSGISDRFSGSKSGTSASLAITGLQTEDEADYYCQSYDTSLNAYIFGAGTRLTV | 13.591326 | 13.344209 | 121 | 110 | 119 | 107 | 119 | 109 | 43 | the heavy chain of 4h5 | the light chain of 4h5 | macaca mulatta | macaca mulatta | C | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 58 | 22 | 0.71 | HL | train |
9kvd_E_G | 9kvd | cryo-em structure of sars-cov-2 prototype spike protein in complex with triple-nab 3g5, 4h5 and 4c11 | no | viral protein/immune system | 2024-12-05 | 2025-08-20 | electron microscopy | 3.44 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV2 | E | G | QVQLQESGPGLVKPSETLSLTCAVSGVSISSFLWNWIRQPPGKGLEWIGEINGNSGSTYYNPSLKSRVTISKDASKSQFSLILGSVTAADTAVYYCATRDSGPRGVDDYWGQGVLVTVSS | DIVMTQIPLSLPVTPGEPASISCRSSQTLLHSGSAHTSLDWYLQKPGQSPQLLIYMVSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSVDFPYSFGQGTKVEIK | VQLQESGPGLVKPSETLSLTCAVSGVSISSFLWNWIRQPPGKGLEWIGEINGNSGSTYYNPSLKSRVTISKDASKSQFSLILGSVTAADTAVYYCATRDSGPRGVDDYWGQGVLVTVSS | DIVMTQIPLSLPVTPGEPASISCRSSQTLLHSGSAHTSLDWYLQKPGQSPQLLIYMVSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSVDFPYSFGQGTKVEIK | 13.953174 | 13.330471 | 120 | 113 | 115 | 105 | 119 | 113 | 39 | the heavy chain of 3g5 | the light chain of 3g5 | macaca mulatta | macaca mulatta | C | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 61 | 23 | 0.64 | HL | train |
9kve_A_B | 9kve | cryo-em structure of sars-cov-2 prototype spike protein in complex with triple-nab 4h1, 4a5 and 4c1 | no | viral protein/immune system | 2024-12-05 | 2025-08-20 | electron microscopy | 2.98 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV1 | A | B | EVQLVESGGGLAKPGGSLRLSCAASGFTFSSYWMNWVRQAPGKGLEWVSVINSGGDNAYYADSVKGRFTTSRDNSKSTLSLQMNSLREEDTAVYYCAKDRNLYYYDSGYYTEFSFDYWGQGVLVTVSS | QSVLTQPPSVSGDPGQSVTISCTGSSSNIGGYYVNWYQQFPGTAPKLLIYDDNNRPSGVSDRFSGSKSGTSASLTITGLQPGDEADYHCSGWDSSLSAVLFGRGTRLTVL | EVQLVESGGGLAKPGGSLRLSCAASGFTFSSYWMNWVRQAPGKGLEWVSVINSGGDNAYYADSVKGRFTTSRDNSKSTLSLQMNSLREEDTAVYYCAKDRNLYYYDSGYYTEFSFDYWGQGVLVTVSS | QSVLTQPPSVSGDPGQSVTISCTGSSSNIGGYYVNWYQQFPGTAPKLLIYDDNNRPSGVSDRFSGSKSGTSASLTITGLQPGDEADYHCSGWDSSLSAVLFGRGTRLTVL | 14.30461 | 13.358984 | 128 | 110 | 128 | 110 | 128 | 110 | 45 | the heavy chain of 4c1 | the light chain of 4c1 | macaca mulatta | macaca mulatta | C | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 48 | 22 | 0.92 | HL | train |
9kve_D_F | 9kve | cryo-em structure of sars-cov-2 prototype spike protein in complex with triple-nab 4h1, 4a5 and 4c1 | no | viral protein/immune system | 2024-12-05 | 2025-08-20 | electron microscopy | 2.98 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV2 | D | F | QVQLQESGPGLVKPSETLSLSCAVSGASISSYWWNWFRQSPGKGLEWIGKINGNSGITYYNPSLKSRLTISKDASKKQLSLTLTSVTAADTAVYFCATRDGNIVGVADYWGQGVLVTVSS | DVVMTQTPLSLPVTPGEPASISCRSSQSLFDGGHPYTSLDWYLQKPGQSPQLLIYMVSNRASGVPDRFSGSASGTDFTLKISRVEAEDVGVYFCMQSVEYPYSFGQGTTVDFK | QVQLQESGPGLVKPSETLSLSCAVSGASISSYWWNWFRQSPGKGLEWIGKINGNSGITYYNPSLKSRLTISKDASKKQLSLTLTSVTAADTAVYFCATRDGNIVGVADYWGQGVLVTVSS | DVVMTQTPLSLPVTPGEPASISCRSSQSLFDGGHPYTSLDWYLQKPGQSPQLLIYMVSNRASGVPDRFSGSASGTDFTLKISRVEAEDVGVYFCMQSVEYPYSFGQGTTVDFK | 14.068832 | 13.709859 | 120 | 113 | 120 | 113 | 120 | 113 | 37 | the heavy chain of 4h1 | the light chain of 4h1 | macaca mulatta | macaca mulatta | C | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 66 | 27 | 0.71 | HL | train |
9kve_E_G | 9kve | cryo-em structure of sars-cov-2 prototype spike protein in complex with triple-nab 4h1, 4a5 and 4c1 | no | viral protein/immune system | 2024-12-05 | 2025-08-20 | electron microscopy | 2.98 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | E | G | EVQLVESGGGLVKPGGSLRLSCVASGFTFSDYEMHWVRQAPGKGLEWVSVISESGGTTYYADSVKGRFTISRDNAKNSLFLQMNSLRAEDTAVYYCTRVVIVVFTAMRHFDYWGQGVLVTVSS | DIQMTQSPSSLSAPVGDTVTITCRASQGINSYLNWFQQKPGKAPKLLIYDASTLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCLQYNNYPFTFGPGTRLDIK | VQLVESGGGLVKPGGSLRLSCVASGFTFSDYEMHWVRQAPGKGLEWVSVISESGGTTYYADSVKGRFTISRDNAKNSLFLQMNSLRAEDTAVYYCTRVVIVVFTAMRHFDYWGQGVLVTVSS | DIQMTQSPSSLSAPVGDTVTITCRASQGINSYLNWFQQKPGKAPKLLIYDASTLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCLQYNNYPFTFGPGTRLDIK | 13.978164 | 13.208085 | 123 | 107 | 122 | 107 | 122 | 107 | 47 | the heavy chain of 4a5 | the light chain of 4a5 | macaca mulatta | macaca mulatta | C | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 46 | 21 | 0.91 | HL | train |
9md2_H_L | 9md2 | neuraminidase in complex with mab 5-6 | no | viral protein/immune system | 2024-12-05 | 2025-08-27 | electron microscopy | 3.4 | N.A. | N.A. | 40815640 | 10.1126/sciadv.adv8257 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV5 | H | L | EVQLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARGGYYGSSYWYFDVWGTGTPVTVSS | ETTVTQSPASLSMAVGKKVTIRCITSTGVDDDMNWYQQKPGEPPKLLISEGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADYYCLQSDNLPYTFGGGTKLEIK | EVQLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARGGYYGSSYWYFDVWGTGTPVTVSS | ETTVTQSPASLSMAVGKKVTIRCITSTGVDDDMNWYQQKPGEPPKLLISEGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADYYCLQSDNLPYTFGGGTKLEIK | 13.674509 | 13.146302 | 122 | 107 | 122 | 107 | 122 | 107 | 45 | mab 5-6 heavy chain | mab 5-6 light chain | mus musculus | mus musculus | A;B | protein;protein | neuraminidase ind11;neuraminidase ind11 | influenza a virus;influenza a virus | 45;20 | 19;9 | 0.86;0.82 | HL | train |
9md2_G_K | 9md2 | neuraminidase in complex with mab 5-6 | no | viral protein/immune system | 2024-12-05 | 2025-08-27 | electron microscopy | 3.4 | N.A. | N.A. | 40815640 | 10.1126/sciadv.adv8257 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV5 | G | K | EVQLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARGGYYGSSYWYFDVWGTGTPVTVSS | ETTVTQSPASLSMAVGKKVTIRCITSTGVDDDMNWYQQKPGEPPKLLISEGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADYYCLQSDNLPYTFGGGTKLEIK | EVQLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARGGYYGSSYWYFDVWGTGTPVTVSS | ETTVTQSPASLSMAVGKKVTIRCITSTGVDDDMNWYQQKPGEPPKLLISEGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADYYCLQSDNLPYTFGGGTKLEIK | 13.673402 | 13.145992 | 122 | 107 | 122 | 107 | 122 | 107 | 45 | mab 5-6 heavy chain | mab 5-6 light chain | mus musculus | mus musculus | A;D | protein;protein | neuraminidase ind11;neuraminidase ind11 | influenza a virus;influenza a virus | 22;44 | 9;19 | 0.82;0.86 | HL | train |
9md2_E_I | 9md2 | neuraminidase in complex with mab 5-6 | no | viral protein/immune system | 2024-12-05 | 2025-08-27 | electron microscopy | 3.4 | N.A. | N.A. | 40815640 | 10.1126/sciadv.adv8257 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV5 | E | I | EVQLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARGGYYGSSYWYFDVWGTGTPVTVSS | ETTVTQSPASLSMAVGKKVTIRCITSTGVDDDMNWYQQKPGEPPKLLISEGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADYYCLQSDNLPYTFGGGTKLEIK | EVQLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARGGYYGSSYWYFDVWGTGTPVTVSS | ETTVTQSPASLSMAVGKKVTIRCITSTGVDDDMNWYQQKPGEPPKLLISEGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADYYCLQSDNLPYTFGGGTKLEIK | 13.674572 | 13.147236 | 122 | 107 | 122 | 107 | 122 | 107 | 45 | mab 5-6 heavy chain | mab 5-6 light chain | mus musculus | mus musculus | B;C | protein;protein | neuraminidase ind11;neuraminidase ind11 | influenza a virus;influenza a virus | 46;20 | 19;9 | 0.83;0.82 | HL | train |
9md2_F_J | 9md2 | neuraminidase in complex with mab 5-6 | no | viral protein/immune system | 2024-12-05 | 2025-08-27 | electron microscopy | 3.4 | N.A. | N.A. | 40815640 | 10.1126/sciadv.adv8257 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV5 | F | J | EVQLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARGGYYGSSYWYFDVWGTGTPVTVSS | ETTVTQSPASLSMAVGKKVTIRCITSTGVDDDMNWYQQKPGEPPKLLISEGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADYYCLQSDNLPYTFGGGTKLEIK | EVQLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCARGGYYGSSYWYFDVWGTGTPVTVSS | ETTVTQSPASLSMAVGKKVTIRCITSTGVDDDMNWYQQKPGEPPKLLISEGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADYYCLQSDNLPYTFGGGTKLEIK | 13.672529 | 13.143152 | 122 | 107 | 122 | 107 | 122 | 107 | 45 | mab 5-6 heavy chain | mab 5-6 light chain | mus musculus | mus musculus | C;D | protein;protein | neuraminidase ind11;neuraminidase ind11 | influenza a virus;influenza a virus | 45;21 | 19;9 | 0.86;0.82 | HL | train |
9md3_H_L | 9md3 | neuraminidase in complex with mab 5-12 | no | viral protein/immune system | 2024-12-05 | 2025-08-27 | electron microscopy | 2.9 | N.A. | N.A. | 40815640 | 10.1126/sciadv.adv8257 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV7 | H | L | EVKLVESGGGLVQPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARSDDGDYFDYWGQGTTLTVSS | DIVLTQSPASLAVSLGQRATISCRASQSVSTSSYSYMHWYQQKPGQPPKLLIKYASNLESGVPARFSGSGSGTDFTLNIHPVEEEDTATYYCQHSWEIPLTFGAGTKLELK | EVKLVESGGGLVQPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARSDDGDYFDYWGQGTTLTVSS | DIVLTQSPASLAVSLGQRATISCRASQSVSTSSYSYMHWYQQKPGQPPKLLIKYASNLESGVPARFSGSGSGTDFTLNIHPVEEEDTATYYCQHSWEIPLTFGAGTKLELK | 13.510478 | 13.380008 | 118 | 111 | 118 | 111 | 118 | 111 | 44 | mab 5-12 heavy chain | mab 5-12 light chain | mus musculus | mus musculus | A | protein | neuraminidase | influenza a virus | 45 | 19 | 0.79 | HL | train |
9md3_E_I | 9md3 | neuraminidase in complex with mab 5-12 | no | viral protein/immune system | 2024-12-05 | 2025-08-27 | electron microscopy | 2.9 | N.A. | N.A. | 40815640 | 10.1126/sciadv.adv8257 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV7 | E | I | EVKLVESGGGLVQPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARSDDGDYFDYWGQGTTLTVSS | DIVLTQSPASLAVSLGQRATISCRASQSVSTSSYSYMHWYQQKPGQPPKLLIKYASNLESGVPARFSGSGSGTDFTLNIHPVEEEDTATYYCQHSWEIPLTFGAGTKLELK | EVKLVESGGGLVQPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARSDDGDYFDYWGQGTTLTVSS | DIVLTQSPASLAVSLGQRATISCRASQSVSTSSYSYMHWYQQKPGQPPKLLIKYASNLESGVPARFSGSGSGTDFTLNIHPVEEEDTATYYCQHSWEIPLTFGAGTKLELK | 13.511493 | 13.377693 | 118 | 111 | 118 | 111 | 118 | 111 | 44 | mab 5-12 heavy chain | mab 5-12 light chain | mus musculus | mus musculus | B | protein | neuraminidase | influenza a virus | 46 | 19 | 0.79 | HL | train |
9md3_F_J | 9md3 | neuraminidase in complex with mab 5-12 | no | viral protein/immune system | 2024-12-05 | 2025-08-27 | electron microscopy | 2.9 | N.A. | N.A. | 40815640 | 10.1126/sciadv.adv8257 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV7 | F | J | EVKLVESGGGLVQPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARSDDGDYFDYWGQGTTLTVSS | DIVLTQSPASLAVSLGQRATISCRASQSVSTSSYSYMHWYQQKPGQPPKLLIKYASNLESGVPARFSGSGSGTDFTLNIHPVEEEDTATYYCQHSWEIPLTFGAGTKLELK | EVKLVESGGGLVQPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARSDDGDYFDYWGQGTTLTVSS | DIVLTQSPASLAVSLGQRATISCRASQSVSTSSYSYMHWYQQKPGQPPKLLIKYASNLESGVPARFSGSGSGTDFTLNIHPVEEEDTATYYCQHSWEIPLTFGAGTKLELK | 13.511788 | 13.383699 | 118 | 111 | 118 | 111 | 118 | 111 | 42 | mab 5-12 heavy chain | mab 5-12 light chain | mus musculus | mus musculus | C | protein | neuraminidase | influenza a virus | 47 | 19 | 0.79 | HL | train |
9md3_G_K | 9md3 | neuraminidase in complex with mab 5-12 | no | viral protein/immune system | 2024-12-05 | 2025-08-27 | electron microscopy | 2.9 | N.A. | N.A. | 40815640 | 10.1126/sciadv.adv8257 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV7 | G | K | EVKLVESGGGLVQPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARSDDGDYFDYWGQGTTLTVSS | DIVLTQSPASLAVSLGQRATISCRASQSVSTSSYSYMHWYQQKPGQPPKLLIKYASNLESGVPARFSGSGSGTDFTLNIHPVEEEDTATYYCQHSWEIPLTFGAGTKLELK | EVKLVESGGGLVQPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARSDDGDYFDYWGQGTTLTVSS | DIVLTQSPASLAVSLGQRATISCRASQSVSTSSYSYMHWYQQKPGQPPKLLIKYASNLESGVPARFSGSGSGTDFTLNIHPVEEEDTATYYCQHSWEIPLTFGAGTKLELK | 13.511075 | 13.380991 | 118 | 111 | 118 | 111 | 118 | 111 | 44 | mab 5-12 heavy chain | mab 5-12 light chain | mus musculus | mus musculus | D | protein | neuraminidase | influenza a virus | 45 | 19 | 0.79 | HL | train |
9md5_H_L | 9md5 | neuraminidase in complex with mab 6-23.2 | no | viral protein/immune system | 2024-12-05 | 2025-08-27 | electron microscopy | 2.9 | N.A. | N.A. | 40815640 | 10.1126/sciadv.adv8257 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EMKLVESEGGLVQPGRSMKLSCTASGFTFSDYYMAWVRQVPEKGLEWVAKINYDGSSTYYLDSLKSRFFISRDNAKNILYLQMSSLKSEDTATYYCARAHYVDERSYWYFDVWGTGTTVTVSS | DIVMTQSHKFMSTSVGDRVSITCKASQDVGPAVAWYRQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSEDLADYFCQQFSSYPLTFGSGTKLEIK | EMKLVESEGGLVQPGRSMKLSCTASGFTFSDYYMAWVRQVPEKGLEWVAKINYDGSSTYYLDSLKSRFFISRDNAKNILYLQMSSLKSEDTATYYCARAHYVDERSYWYFDVWGTGTTVTVSS | DIVMTQSHKFMSTSVGDRVSITCKASQDVGPAVAWYRQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSEDLADYFCQQFSSYPLTFGSGTKLEIK | 14.153822 | 13.103398 | 123 | 107 | 123 | 107 | 123 | 107 | 44 | mab 6-23.2 heavy chain | mab 6-23.2 light chain | mus musculus | mus musculus | A | protein | neuraminidase | influenza a virus | 71 | 22 | 0.71 | HL | train |
9md5_E_I | 9md5 | neuraminidase in complex with mab 6-23.2 | no | viral protein/immune system | 2024-12-05 | 2025-08-27 | electron microscopy | 2.9 | N.A. | N.A. | 40815640 | 10.1126/sciadv.adv8257 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | E | I | EMKLVESEGGLVQPGRSMKLSCTASGFTFSDYYMAWVRQVPEKGLEWVAKINYDGSSTYYLDSLKSRFFISRDNAKNILYLQMSSLKSEDTATYYCARAHYVDERSYWYFDVWGTGTTVTVSS | DIVMTQSHKFMSTSVGDRVSITCKASQDVGPAVAWYRQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSEDLADYFCQQFSSYPLTFGSGTKLEIK | EMKLVESEGGLVQPGRSMKLSCTASGFTFSDYYMAWVRQVPEKGLEWVAKINYDGSSTYYLDSLKSRFFISRDNAKNILYLQMSSLKSEDTATYYCARAHYVDERSYWYFDVWGTGTTVTVSS | DIVMTQSHKFMSTSVGDRVSITCKASQDVGPAVAWYRQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSEDLADYFCQQFSSYPLTFGSGTKLEIK | 14.156074 | 13.103441 | 123 | 107 | 123 | 107 | 123 | 107 | 44 | mab 6-23.2 heavy chain | mab 6-23.2 light chain | mus musculus | mus musculus | B | protein | neuraminidase | influenza a virus | 71 | 22 | 0.71 | HL | train |
9md5_F_J | 9md5 | neuraminidase in complex with mab 6-23.2 | no | viral protein/immune system | 2024-12-05 | 2025-08-27 | electron microscopy | 2.9 | N.A. | N.A. | 40815640 | 10.1126/sciadv.adv8257 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | F | J | EMKLVESEGGLVQPGRSMKLSCTASGFTFSDYYMAWVRQVPEKGLEWVAKINYDGSSTYYLDSLKSRFFISRDNAKNILYLQMSSLKSEDTATYYCARAHYVDERSYWYFDVWGTGTTVTVSS | DIVMTQSHKFMSTSVGDRVSITCKASQDVGPAVAWYRQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSEDLADYFCQQFSSYPLTFGSGTKLEIK | EMKLVESEGGLVQPGRSMKLSCTASGFTFSDYYMAWVRQVPEKGLEWVAKINYDGSSTYYLDSLKSRFFISRDNAKNILYLQMSSLKSEDTATYYCARAHYVDERSYWYFDVWGTGTTVTVSS | DIVMTQSHKFMSTSVGDRVSITCKASQDVGPAVAWYRQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSEDLADYFCQQFSSYPLTFGSGTKLEIK | 14.156152 | 13.103721 | 123 | 107 | 123 | 107 | 123 | 107 | 44 | mab 6-23.2 heavy chain | mab 6-23.2 light chain | mus musculus | mus musculus | C | protein | neuraminidase | influenza a virus | 70 | 22 | 0.71 | HL | train |
9md5_G_K | 9md5 | neuraminidase in complex with mab 6-23.2 | no | viral protein/immune system | 2024-12-05 | 2025-08-27 | electron microscopy | 2.9 | N.A. | N.A. | 40815640 | 10.1126/sciadv.adv8257 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | G | K | EMKLVESEGGLVQPGRSMKLSCTASGFTFSDYYMAWVRQVPEKGLEWVAKINYDGSSTYYLDSLKSRFFISRDNAKNILYLQMSSLKSEDTATYYCARAHYVDERSYWYFDVWGTGTTVTVSS | DIVMTQSHKFMSTSVGDRVSITCKASQDVGPAVAWYRQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSEDLADYFCQQFSSYPLTFGSGTKLEIK | EMKLVESEGGLVQPGRSMKLSCTASGFTFSDYYMAWVRQVPEKGLEWVAKINYDGSSTYYLDSLKSRFFISRDNAKNILYLQMSSLKSEDTATYYCARAHYVDERSYWYFDVWGTGTTVTVSS | DIVMTQSHKFMSTSVGDRVSITCKASQDVGPAVAWYRQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQSEDLADYFCQQFSSYPLTFGSGTKLEIK | 14.153779 | 13.103615 | 123 | 107 | 123 | 107 | 123 | 107 | 44 | mab 6-23.2 heavy chain | mab 6-23.2 light chain | mus musculus | mus musculus | D | protein | neuraminidase | influenza a virus | 71 | 22 | 0.71 | HL | train |
9md6_H_L | 9md6 | neuraminidase in complex with mab 6-23.1 | no | viral protein/immune system | 2024-12-05 | 2025-08-27 | electron microscopy | 2.7 | N.A. | N.A. | 40815640 | 10.1126/sciadv.adv8257 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | H | L | QVQLQQPGTELVKPGASVKLSCKTSGFSFTSDWIHWVKQRPGQGLEWIGNINPSNGGPSYNEKFKSKATLTVDKSSSTAYMQLNSLTSEDSAVYYCSQSGNYDYDDYAMDYWGQGTSVTVSS | DIVMTQSHKFMSTLVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTIRNVQSEDLADYLCHQYSSYPLTFGAGTKLELR | QVQLQQPGTELVKPGASVKLSCKTSGFSFTSDWIHWVKQRPGQGLEWIGNINPSNGGPSYNEKFKSKATLTVDKSSSTAYMQLNSLTSEDSAVYYCSQSGNYDYDDYAMDYWGQGTSVTVSS | DIVMTQSHKFMSTLVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTIRNVQSEDLADYLCHQYSSYPLTFGAGTKLELR | 14.167822 | 13.181941 | 122 | 107 | 122 | 107 | 122 | 107 | 42 | heavy chain | light chain | mus musculus | mus musculus | A | protein | neuraminidase | influenza a virus | 66 | 24 | 0.73 | HL | train |
9md6_E_I | 9md6 | neuraminidase in complex with mab 6-23.1 | no | viral protein/immune system | 2024-12-05 | 2025-08-27 | electron microscopy | 2.7 | N.A. | N.A. | 40815640 | 10.1126/sciadv.adv8257 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | E | I | QVQLQQPGTELVKPGASVKLSCKTSGFSFTSDWIHWVKQRPGQGLEWIGNINPSNGGPSYNEKFKSKATLTVDKSSSTAYMQLNSLTSEDSAVYYCSQSGNYDYDDYAMDYWGQGTSVTVSS | DIVMTQSHKFMSTLVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTIRNVQSEDLADYLCHQYSSYPLTFGAGTKLELR | QVQLQQPGTELVKPGASVKLSCKTSGFSFTSDWIHWVKQRPGQGLEWIGNINPSNGGPSYNEKFKSKATLTVDKSSSTAYMQLNSLTSEDSAVYYCSQSGNYDYDDYAMDYWGQGTSVTVSS | DIVMTQSHKFMSTLVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTIRNVQSEDLADYLCHQYSSYPLTFGAGTKLELR | 14.167825 | 13.181938 | 122 | 107 | 122 | 107 | 122 | 107 | 42 | heavy chain | light chain | mus musculus | mus musculus | B | protein | neuraminidase | influenza a virus | 66 | 24 | 0.73 | HL | train |
9md6_F_J | 9md6 | neuraminidase in complex with mab 6-23.1 | no | viral protein/immune system | 2024-12-05 | 2025-08-27 | electron microscopy | 2.7 | N.A. | N.A. | 40815640 | 10.1126/sciadv.adv8257 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | F | J | QVQLQQPGTELVKPGASVKLSCKTSGFSFTSDWIHWVKQRPGQGLEWIGNINPSNGGPSYNEKFKSKATLTVDKSSSTAYMQLNSLTSEDSAVYYCSQSGNYDYDDYAMDYWGQGTSVTVSS | DIVMTQSHKFMSTLVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTIRNVQSEDLADYLCHQYSSYPLTFGAGTKLELR | QVQLQQPGTELVKPGASVKLSCKTSGFSFTSDWIHWVKQRPGQGLEWIGNINPSNGGPSYNEKFKSKATLTVDKSSSTAYMQLNSLTSEDSAVYYCSQSGNYDYDDYAMDYWGQGTSVTVSS | DIVMTQSHKFMSTLVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTIRNVQSEDLADYLCHQYSSYPLTFGAGTKLELR | 14.169118 | 13.182215 | 122 | 107 | 122 | 107 | 122 | 107 | 42 | heavy chain | light chain | mus musculus | mus musculus | C | protein | neuraminidase | influenza a virus | 66 | 24 | 0.73 | HL | train |
9md6_G_K | 9md6 | neuraminidase in complex with mab 6-23.1 | no | viral protein/immune system | 2024-12-05 | 2025-08-27 | electron microscopy | 2.7 | N.A. | N.A. | 40815640 | 10.1126/sciadv.adv8257 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | G | K | QVQLQQPGTELVKPGASVKLSCKTSGFSFTSDWIHWVKQRPGQGLEWIGNINPSNGGPSYNEKFKSKATLTVDKSSSTAYMQLNSLTSEDSAVYYCSQSGNYDYDDYAMDYWGQGTSVTVSS | DIVMTQSHKFMSTLVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTIRNVQSEDLADYLCHQYSSYPLTFGAGTKLELR | QVQLQQPGTELVKPGASVKLSCKTSGFSFTSDWIHWVKQRPGQGLEWIGNINPSNGGPSYNEKFKSKATLTVDKSSSTAYMQLNSLTSEDSAVYYCSQSGNYDYDDYAMDYWGQGTSVTVSS | DIVMTQSHKFMSTLVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTIRNVQSEDLADYLCHQYSSYPLTFGAGTKLELR | 14.167825 | 13.181941 | 122 | 107 | 122 | 107 | 122 | 107 | 42 | heavy chain | light chain | mus musculus | mus musculus | D | protein | neuraminidase | influenza a virus | 66 | 24 | 0.73 | HL | train |
9hls_C | 9hls | structure of a16/g9 (vaccinia virus) in complex with vhh d07, vhh b01 and vhh c05 | no | viral protein | 2024-12-05 | 2025-09-03 | x-ray diffraction | 3.2 | 0.292 | 0.237 | 40865523 | 10.1016/j.cell.2025.07.040 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | MGEVQLQASGGGLVQPGGSLRLSCAASGIVFSNNRMSWYRQAPGKQREVVATITSGGATDYQDSVEGRFTISRDMAKNTVYLQMNSLKPEDTAVYFCNARRDNFATAIYWGQGTQVTVSSLEHHHHHHHHGSGLVPRGSGLNDIFEAQKIEWHE | N.A. | EVQLQASGGGLVQPGGSLRLSCAASGIVFSNNRMSWYRQAPGKQREVVATITSGGATDYQDSVEGRFTISRDMAKNTVYLQMNSLKPEDTAVYFCNARRDNFATAIYWGQGTQVTVS | N.A. | 13.678183 | 0 | 154 | 0 | 117 | 0 | 117 | 0 | 0 | vhh d07 | N.A. | vicugna pacos | N.A. | B | protein | entry-fusion complex protein opg094 | vaccinia virus western reserve | 42 | 6 | 0.29 | H_only | train |
9hls_E | 9hls | structure of a16/g9 (vaccinia virus) in complex with vhh d07, vhh b01 and vhh c05 | no | viral protein | 2024-12-05 | 2025-09-03 | x-ray diffraction | 3.2 | 0.292 | 0.237 | 40865523 | 10.1016/j.cell.2025.07.040 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | MGDVQLVESGGGLVQAGGSLGLSCAASGTIFAVNTMGWYRQAPGKQREMVATSSYYGRTNYADSAKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNYERVAFGSARETYWGQGTQVTVSSLEHHHHHHHHGSGLVPRGSGLNDIFEAQKIEWHE | N.A. | DVQLVESGGGLVQAGGSLGLSCAASGTIFAVNTMGWYRQAPGKQREMVATSSYYGRTNYADSAKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNYERVAFGSARETYWGQGTQVTVSS | N.A. | 14.178197 | 0 | 156 | 0 | 120 | 0 | 120 | 0 | 0 | vhh c05 | N.A. | vicugna pacos | N.A. | B | protein | entry-fusion complex protein opg094 | vaccinia virus western reserve | 39 | 18 | 0.95 | H_only | train |
9hls_D | 9hls | structure of a16/g9 (vaccinia virus) in complex with vhh d07, vhh b01 and vhh c05 | no | viral protein | 2024-12-05 | 2025-09-03 | x-ray diffraction | 3.2 | 0.292 | 0.237 | 40865523 | 10.1016/j.cell.2025.07.040 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | MGEVQLAESGGGLVEPGGSLRLSCAASGRIFSINYMGWGRQAPGKQRELVATITSGGSTNYVDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNANIRSTPWSSEDSWGQGTQVTVSSLEHHHHHHHHGSGLVPRGSGLNDIFEAQKIEWHE | N.A. | VQLAESGGGLVEPGGSLRLSCAASGRIFSINYMGWGRQAPGKQRELVATITSGGSTNYVDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNANIRSTPWSSEDSWGQGTQVTV | N.A. | 14.12462 | 0 | 156 | 0 | 117 | 0 | 117 | 0 | 0 | vhh b01 | N.A. | vicugna pacos | N.A. | B;A | protein;protein | entry-fusion complex protein opg094;virion membrane protein opg143 | vaccinia virus western reserve;vaccinia virus western reserve | 39;27 | 14;10 | 0.78;0.83 | H_only | train |
9hls_H | 9hls | structure of a16/g9 (vaccinia virus) in complex with vhh d07, vhh b01 and vhh c05 | no | viral protein | 2024-12-05 | 2025-09-03 | x-ray diffraction | 3.2 | 0.292 | 0.237 | 40865523 | 10.1016/j.cell.2025.07.040 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | H | N.A. | MGEVQLQASGGGLVQPGGSLRLSCAASGIVFSNNRMSWYRQAPGKQREVVATITSGGATDYQDSVEGRFTISRDMAKNTVYLQMNSLKPEDTAVYFCNARRDNFATAIYWGQGTQVTVSSLEHHHHHHHHGSGLVPRGSGLNDIFEAQKIEWHE | N.A. | EVQLQASGGGLVQPGGSLRLSCAASGIVFSNNRMSWYRQAPGKQREVVATITSGGATDYQDSVEGRFTISRDMAKNTVYLQMNSLKPEDTAVYFCNARRDNFATAIYWGQGTQVTVS | N.A. | 13.636191 | 0 | 154 | 0 | 113 | 0 | 117 | 0 | 0 | vhh d07 | N.A. | vicugna pacos | N.A. | G | protein | entry-fusion complex protein opg094 | vaccinia virus western reserve | 43 | 6 | 0.27 | H_only | train |
9hls_J | 9hls | structure of a16/g9 (vaccinia virus) in complex with vhh d07, vhh b01 and vhh c05 | no | viral protein | 2024-12-05 | 2025-09-03 | x-ray diffraction | 3.2 | 0.292 | 0.237 | 40865523 | 10.1016/j.cell.2025.07.040 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | J | N.A. | MGDVQLVESGGGLVQAGGSLGLSCAASGTIFAVNTMGWYRQAPGKQREMVATSSYYGRTNYADSAKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNYERVAFGSARETYWGQGTQVTVSSLEHHHHHHHHGSGLVPRGSGLNDIFEAQKIEWHE | N.A. | DVQLVESGGGLVQAGGSLGLSCAASGTIFAVNTMGWYRQAPGKQREMVATSSYYGRTNYADSAKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNYERVAFGSARETYWGQGTQVTVSSL | N.A. | 14.298783 | 0 | 156 | 0 | 121 | 0 | 121 | 0 | 0 | vhh c05 | N.A. | vicugna pacos | N.A. | G | protein | entry-fusion complex protein opg094 | vaccinia virus western reserve | 38 | 18 | 0.95 | H_only | train |
9hls_I | 9hls | structure of a16/g9 (vaccinia virus) in complex with vhh d07, vhh b01 and vhh c05 | no | viral protein | 2024-12-05 | 2025-09-03 | x-ray diffraction | 3.2 | 0.292 | 0.237 | 40865523 | 10.1016/j.cell.2025.07.040 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | I | N.A. | MGEVQLAESGGGLVEPGGSLRLSCAASGRIFSINYMGWGRQAPGKQRELVATITSGGSTNYVDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNANIRSTPWSSEDSWGQGTQVTVSSLEHHHHHHHHGSGLVPRGSGLNDIFEAQKIEWHE | N.A. | VQLAESGGGLVEPGGSLRLSCAASGRIFSINYMGWGRQAPGKQRELVATITSGGSTNYVDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNANIRSTPWSSEDSWGQGTQVTV | N.A. | 14.134429 | 0 | 156 | 0 | 117 | 0 | 117 | 0 | 0 | vhh b01 | N.A. | vicugna pacos | N.A. | G;F | protein;protein | entry-fusion complex protein opg094;virion membrane protein opg143 | vaccinia virus western reserve;vaccinia virus western reserve | 40;24 | 14;10 | 0.78;0.91 | H_only | train |
9kwg_H | 9kwg | structure of mouse c5a bound mouse c5ar1 in complex with go | yes | signaling protein | 2024-12-05 | 2025-11-26 | electron microscopy | 3.15 | N.A. | N.A. | 40501890 | 10.1101/2025.05.26.656101 | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.32881 | 0 | 248 | 0 | 230 | 0 | 247 | 0 | 0 | antibody fragment - scfv16 | N.A. | mus musculus | N.A. | C;B | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(o) subunit alpha | homo sapiens;homo sapiens | 24;32 | 9;19 | 0.75;0.86 | H_only | train |
9kvi_E | 9kvi | a cryo_em structure of 5_ht1a complex with dmt | no | membrane protein | 2024-12-05 | 2025-12-03 | electron microscopy | 2.54 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.26966 | 0 | 247 | 0 | 232 | 0 | 247 | 0 | 0 | scfv16 | N.A. | homo sapiens | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1 | homo sapiens;homo sapiens | 24;38 | 11;23 | 0.92;0.92 | H_only | train |
9kvj_C_D | 9kvj | cryo-em structure of sars-cov-2 ba.5 spike protein in complex with nab 1c4 (local refinement) | yes | viral protein/immune system | 2024-12-05 | 2025-12-10 | electron microscopy | 3.82 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV7 | IGKV3 | C | D | QIQLVQSGPELKKPGETVKISCKASGYTFTDYGLNWVKQAPGKGLKWMGWINTYSGEPTYNDEFRGRFAFSLETSTITAYLKINNLKNEDTATYFCARGGNWDWYFDVWGAGTTVTVSS | DIVLTQSPATLSVTPGDNVSLSCRASQIISNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNTWPLTCGSGTKLELN | QIQLVQSGPELKKPGETVKISCKASGYTFTDYGLNWVKQAPGKGLKWMGWINTYSGEPTYNDEFRGRFAFSLETSTITAYLKINNLKNEDTATYFCARGGNWDWYFDVWGAGTTVTVSS | DIVLTQSPATLSVTPGDNVSLSCRASQIISNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNTWPLTCGSGTKLELN | 14.057257 | 13.411825 | 119 | 107 | 119 | 107 | 119 | 107 | 40 | heavy chain of nab 1c4 | light chain of nab 1c4 | mus musculus | mus musculus | G | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 34 | 16 | 0.89 | HL | train |
9kvk_A_B | 9kvk | cryo-em structure of sars-cov-2 spike protein in complex with three-nab 8h12, 3e2 and 1c4 | no | viral protein/immune system | 2024-12-05 | 2025-12-10 | electron microscopy | 3.44 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | A | B | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAQIRRKANNHATYYAESVKGRFTISRDDSKSSVYLQMNSLRAEDTGIYYCIRGMTYAMDFWGQGTSVTVS | DIVMTQFQKFMSTSVGDRVSITCKASQNVRTAVAWYQQKPGQSPKAMIYLASNRHRGVPDRFTGSGCGTDFTLTISNVQCEDLADYFCLQHRNYPLTFGGGTKLEIK | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAQIRRKANNHATYYAESVKGRFTISRDDSKSSVYLQMNSLRAEDTGIYYCIRGMTYAMDFWGQGTSVTVS | DIVMTQFQKFMSTSVGDRVSITCKASQNVRTAVAWYQQKPGQSPKAMIYLASNRHRGVPDRFTGSGCGTDFTLTISNVQCEDLADYFCLQHRNYPLTFGGGTKLEIK | 13.816378 | 13.5475 | 118 | 107 | 118 | 107 | 118 | 107 | 41 | heavy chain of nab 8h12 | light chain of nab 8h12 | mus musculus | mus musculus | G | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 33 | 16 | 0.84 | HL | train |
9kvk_C_D | 9kvk | cryo-em structure of sars-cov-2 spike protein in complex with three-nab 8h12, 3e2 and 1c4 | no | viral protein/immune system | 2024-12-05 | 2025-12-10 | electron microscopy | 3.44 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV7 | IGKV3 | C | D | QIQLVQSGPELKKPGETVKISCKASGYTFTDYGLNWVKQAPGKGLKWMGWINTYSGEPTYNDEFRGRFAFSLETSTITAYLKINNLKNEDTATYFCARGGNWDWYFDVWGAGTTVTVSS | DIVLTQSPATLSVTPGDNVSLSCRASQIISNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNTWPLTCGSGTKLELN | QIQLVQSGPELKKPGETVKISCKASGYTFTDYGLNWVKQAPGKGLKWMGWINTYSGEPTYNDEFRGRFAFSLETSTITAYLKINNLKNEDTATYFCARGGNWDWYFDVWGAGTTVTVSS | DIVLTQSPATLSVTPGDNVSLSCRASQIISNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNTWPLTCGSGTKLELN | 14.022237 | 13.412018 | 119 | 107 | 119 | 107 | 119 | 107 | 33 | heavy chain of nab 8h12 | light chain of nab 8h12 | mus musculus | mus musculus | G | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 34 | 17 | 0.94 | HL | train |
9kvk_H_L | 9kvk | cryo-em structure of sars-cov-2 spike protein in complex with three-nab 8h12, 3e2 and 1c4 | no | viral protein/immune system | 2024-12-05 | 2025-12-10 | electron microscopy | 3.44 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | H | L | EVMLVESGGGVVKPGGSLKLSCAASGFSFSTYAMSWIRQTPEKSLEWVAAISSGGTNTYYPGSVKGRFTISRDKAMNTLYLQLSSLRSEDTAMYYCVRHSGNYVDSVMDYWGQGTSVTVSS | QIVLTQSPAIMSASLGEEITLTCSVSSSVSDMHWYQQKSGTSPKVFIYSTSNLASGVPSRFSGSGSGTFYSLTISSVEAEDAAYYYCHQWSSWTFGGGTKLEIK | EVMLVESGGGVVKPGGSLKLSCAASGFSFSTYAMSWIRQTPEKSLEWVAAISSGGTNTYYPGSVKGRFTISRDKAMNTLYLQLSSLRSEDTAMYYCVRHSGNYVDSVMDYWGQGTSVTVSS | QIVLTQSPAIMSASLGEEITLTCSVSSSVSDMHWYQQKSGTSPKVFIYSTSNLASGVPSRFSGSGSGTFYSLTISSVEAEDAAYYYCHQWSSWTFGGGTKLEIK | 13.619259 | 13.029076 | 121 | 104 | 121 | 104 | 121 | 104 | 40 | heavy chain of nab 3e2 | light chain of nab 3e2 | mus musculus | mus musculus | G | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 42 | 17 | 0.77 | HL | train |
9kvq_A_B | 9kvq | cryo-em structure of sars-cov-2 ba.1 spike protein in complex with three-nab 8h12, 3e2 and 1c4 | yes | viral protein/immune system | 2024-12-05 | 2025-12-10 | electron microscopy | 3.95 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | A | B | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAQIRRKANNHATYYAESVKGRFTISRDDSKSSVYLQMNSLRAEDTGIYYCIRGMTYAMDFWGQGTSVTVSS | DIVMTQFQKFMSTSVGDRVSITCKASQNVRTAVAWYQQKPGQSPKAMIYLASNRHRGVPDRFTGSGCGTDFTLTISNVQCEDLADYFCLQHRNYPLTFGGGTKLEIK | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAQIRRKANNHATYYAESVKGRFTISRDDSKSSVYLQMNSLRAEDTGIYYCIRGMTYAMDFWGQGTSVTVS | DIVMTQFQKFMSTSVGDRVSITCKASQNVRTAVAWYQQKPGQSPKAMIYLASNRHRGVPDRFTGSGCGTDFTLTISNVQCEDLADYFCLQHRNYPLTFGGGTKLEIK | 13.872398 | 13.615853 | 119 | 107 | 118 | 107 | 118 | 107 | 45 | heavy chain of 8h12 | light chain of 8h12 | mus musculus | mus musculus | G | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 35 | 17 | 0.81 | HL | train |
9kvq_C_D | 9kvq | cryo-em structure of sars-cov-2 ba.1 spike protein in complex with three-nab 8h12, 3e2 and 1c4 | yes | viral protein/immune system | 2024-12-05 | 2025-12-10 | electron microscopy | 3.95 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV7 | IGKV3 | C | D | QIQLVQSGPELKKPGETVKISCKASGYTFTDYGLNWVKQAPGKGLKWMGWINTYSGEPTYNDEFRGRFAFSLETSTITAYLKINNLKNEDTATYFCARGGNWDWYFDVWGAGTTVTVSS | DIVLTQSPATLSVTPGDNVSLSCRASQIISNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNTWPLTCGSGTKLELN | QIQLVQSGPELKKPGETVKISCKASGYTFTDYGLNWVKQAPGKGLKWMGWINTYSGEPTYNDEFRGRFAFSLETSTITAYLKINNLKNEDTATYFCARGGNWDWYFDVWGAGTTVTVSS | DIVLTQSPATLSVTPGDNVSLSCRASQIISNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNTWPLTCGSGTKLELN | 14.022569 | 13.43171 | 119 | 107 | 119 | 107 | 119 | 107 | 39 | heavy chain of 1c4 | light chain of 1c4 | mus musculus | mus musculus | G | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 33 | 16 | 0.89 | HL | train |
9kvq_H_L | 9kvq | cryo-em structure of sars-cov-2 ba.1 spike protein in complex with three-nab 8h12, 3e2 and 1c4 | yes | viral protein/immune system | 2024-12-05 | 2025-12-10 | electron microscopy | 3.95 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | H | L | EVMLVESGGGVVKPGGSLKLSCAASGFSFSTYAMSWIRQTPEKSLEWVAAISSGGTNTYYPGSVKGRFTISRDKAMNTLYLQLSSLRSEDTAMYYCVRHSGNYVDSVMDYWGQGTSVTVSS | QIVLTQSPAIMSASLGEEITLTCSVSSSVSDMHWYQQKSGTSPKVFIYSTSNLASGVPSRFSGSGSGTFYSLTISSVEAEDAAYYYCHQWSSWTFGGGTKLEIK | EVMLVESGGGVVKPGGSLKLSCAASGFSFSTYAMSWIRQTPEKSLEWVAAISSGGTNTYYPGSVKGRFTISRDKAMNTLYLQLSSLRSEDTAMYYCVRHSGNYVDSVMDYWGQGTSVTVSS | QIVLTQSPAIMSASLGEEITLTCSVSSSVSDMHWYQQKSGTSPKVFIYSTSNLASGVPSRFSGSGSGTFYSLTISSVEAEDAAYYYCHQWSSWTFGGGTKLEIK | 13.723768 | 13.075765 | 121 | 104 | 121 | 104 | 121 | 104 | 44 | heavy chain of 3e2 | light chain of 3e2 | mus musculus | mus musculus | G | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 40 | 15 | 0.71 | HL | train |
9kvt_A_B | 9kvt | cryo-em structure of sars-cov-2 ba.2 spike protein in complex with triple-nab 8h12, 3e2 and 1c4 (local refinement) | yes | viral protein/immune system | 2024-12-05 | 2025-12-10 | electron microscopy | 3.9 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | A | B | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAQIRRKANNHATYYAESVKGRFTISRDDSKSSVYLQMNSLRAEDTGIYYCIRGMTYAMDFWGQGTSVTVSS | DIVMTQFQKFMSTSVGDRVSITCKASQNVRTAVAWYQQKPGQSPKAMIYLASNRHRGVPDRFTGSGCGTDFTLTISNVQCEDLADYFCLQHRNYPLTFGGGTKLEIK | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAQIRRKANNHATYYAESVKGRFTISRDDSKSSVYLQMNSLRAEDTGIYYCIRGMTYAMDFWGQGTSVTVS | DIVMTQFQKFMSTSVGDRVSITCKASQNVRTAVAWYQQKPGQSPKAMIYLASNRHRGVPDRFTGSGCGTDFTLTISNVQCEDLADYFCLQHRNYPLTFGGGTKLEIK | 13.926281 | 13.578053 | 119 | 107 | 118 | 107 | 118 | 107 | 41 | the heavy chain of 8h12 | the light chain of 8h12 | mus musculus | mus musculus | G | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 32 | 17 | 0.89 | HL | train |
9kvt_C_D | 9kvt | cryo-em structure of sars-cov-2 ba.2 spike protein in complex with triple-nab 8h12, 3e2 and 1c4 (local refinement) | yes | viral protein/immune system | 2024-12-05 | 2025-12-10 | electron microscopy | 3.9 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV7 | IGKV3 | C | D | QIQLVQSGPELKKPGETVKISCKASGYTFTDYGLNWVKQAPGKGLKWMGWINTYSGEPTYNDEFRGRFAFSLETSTITAYLKINNLKNEDTATYFCARGGNWDWYFDVWGAGTTVTVSS | DIVLTQSPATLSVTPGDNVSLSCRASQIISNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNTWPLTCGSGTKLELN | QIQLVQSGPELKKPGETVKISCKASGYTFTDYGLNWVKQAPGKGLKWMGWINTYSGEPTYNDEFRGRFAFSLETSTITAYLKINNLKNEDTATYFCARGGNWDWYFDVWGAGTTVTVSS | DIVLTQSPATLSVTPGDNVSLSCRASQIISNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNTWPLTCGSGTKLELN | 14.04407 | 13.433197 | 119 | 107 | 119 | 107 | 119 | 107 | 36 | the heavy chain of 1c4 | the light chain of 1c4 | mus musculus | mus musculus | G | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 39 | 18 | 0.86 | HL | train |
9kvt_H_L | 9kvt | cryo-em structure of sars-cov-2 ba.2 spike protein in complex with triple-nab 8h12, 3e2 and 1c4 (local refinement) | yes | viral protein/immune system | 2024-12-05 | 2025-12-10 | electron microscopy | 3.9 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | H | L | EVMLVESGGGVVKPGGSLKLSCAASGFSFSTYAMSWIRQTPEKSLEWVAAISSGGTNTYYPGSVKGRFTISRDKAMNTLYLQLSSLRSEDTAMYYCVRHSGNYVDSVMDYWGQGTSVTVSS | QIVLTQSPAIMSASLGEEITLTCSVSSSVSDMHWYQQKSGTSPKVFIYSTSNLASGVPSRFSGSGSGTFYSLTISSVEAEDAAYYYCHQWSSWTFGGGTKLEIK | EVMLVESGGGVVKPGGSLKLSCAASGFSFSTYAMSWIRQTPEKSLEWVAAISSGGTNTYYPGSVKGRFTISRDKAMNTLYLQLSSLRSEDTAMYYCVRHSGNYVDSVMDYWGQGTSVTVSS | QIVLTQSPAIMSASLGEEITLTCSVSSSVSDMHWYQQKSGTSPKVFIYSTSNLASGVPSRFSGSGSGTFYSLTISSVEAEDAAYYYCHQWSSWTFGGGTKLEIK | 13.736746 | 13.111181 | 121 | 104 | 121 | 104 | 121 | 104 | 41 | the heavy chain of 3e2 | the light chain of 3e2 | mus musculus | mus musculus | G | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 38 | 14 | 0.7 | HL | train |
9kwe_H_L | 9kwe | cryo-em structure of the ict01-btn3a1/btn3a2 complex | no | immune system | 2024-12-05 | 2025-12-10 | electron microscopy | 3.7 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | EFGLSWLFLVAILKGVQCQVQLVQSGAEVKKPGASVKLSCKASGYIFTRYYMYWVKQRPGQGLEWIGEINPNNGGTKFNEKFKNRATLTVDKSISTAYMELSRLRSDDTAVYYCSREDDYDGTPFAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGGSHHHHHHHH | MDMRVPAQLLGLLLLWLSGARCDIQMTQSPSSLSASVGDRVTITCHASQNINVWLSWYQQKPGKAPKLLIYKASNLHTGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQGQTYPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKLSCKASGYIFTRYYMYWVKQRPGQGLEWIGEINPNNGGTKFNEKFKNRATLTVDKSISTAYMELSRLRSDDTAVYYCSREDDYDGTPFAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSSLSASVGDRVTITCHASQNINVWLSWYQQKPGKAPKLLIYKASNLHTGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQGQTYPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.367367 | 23.74571 | 254 | 236 | 225 | 214 | 225 | 214 | 103 | ict01 heavy chain | ict01 light chain | homo sapiens | homo sapiens | E | protein | butyrophilin subfamily 3 member a2 | homo sapiens | 35 | 20 | 0.95 | HL | train |
9hll_B | 9hll | murine am i-domain in complex with nanobody acr3 | no | immune system | 2024-12-05 | 2025-12-17 | x-ray diffraction | 2.17 | 0.259 | 0.202 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLVESGGGLVQAGGSLRLSCTTSGFTFDDYAIGWFRQAPGKEREGVSCISSSEGKYYSDSAKGRFTISSDNAKNTVYLQMNNLKPEDTAVYYCAAEWNNFGRLCMYPDYWGQGTQVTVSSLEHHHHHH | N.A. | QVQLVESGGGLVQAGGSLRLSCTTSGFTFDDYAIGWFRQAPGKEREGVSCISSSEGKYYSDSAKGRFTISSDNAKNTVYLQMNNLKPEDTAVYYCAAEWNNFGRLCMYPDYWGQGTQVTVSS | N.A. | 13.906695 | 0 | 130 | 0 | 122 | 0 | 122 | 0 | 0 | acr3 nanobody | N.A. | lama glama | N.A. | A | protein | integrin alpha-m | mus musculus | 16 | 6 | 1 | H_only | train |
9hll_C | 9hll | murine am i-domain in complex with nanobody acr3 | no | immune system | 2024-12-05 | 2025-12-17 | x-ray diffraction | 2.17 | 0.259 | 0.202 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | QVQLVESGGGLVQAGGSLRLSCTTSGFTFDDYAIGWFRQAPGKEREGVSCISSSEGKYYSDSAKGRFTISSDNAKNTVYLQMNNLKPEDTAVYYCAAEWNNFGRLCMYPDYWGQGTQVTVSSLEHHHHHH | N.A. | QVQLVESGGGLVQAGGSLRLSCTTSGFTFDDYAIGWFRQAPGKEREGVSCISSSEGKYYSDSAKGRFTISSDNAKNTVYLQMNNLKPEDTAVYYCAAEWNNFGRLCMYPDYWGQGTQVTVSS | N.A. | 13.768341 | 0 | 130 | 0 | 122 | 0 | 122 | 0 | 0 | acr3 nanobody | N.A. | lama glama | N.A. | A | protein | integrin alpha-m | mus musculus | 31 | 9 | 0.64 | H_only | train |
9hll_D | 9hll | murine am i-domain in complex with nanobody acr3 | no | immune system | 2024-12-05 | 2025-12-17 | x-ray diffraction | 2.17 | 0.259 | 0.202 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | QVQLVESGGGLVQAGGSLRLSCTTSGFTFDDYAIGWFRQAPGKEREGVSCISSSEGKYYSDSAKGRFTISSDNAKNTVYLQMNNLKPEDTAVYYCAAEWNNFGRLCMYPDYWGQGTQVTVSSLEHHHHHH | N.A. | QVQLVESGGGLVQAGGSLRLSCTTSGFTFDDYAIGWFRQAPGKEREGVSCISSSEGKYYSDSAKGRFTISSDNAKNTVYLQMNNLKPEDTAVYYCAAEWNNFGRLCMYPDYWGQGTQVTVSSLEH | N.A. | 14.423384 | 0 | 130 | 0 | 125 | 0 | 125 | 0 | 0 | acr3 nanobody | N.A. | lama glama | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9kx6_H | 9kx6 | structure of human c5a-desarg bound mouse c5ar1 in complex with go | yes | signaling protein | 2024-12-06 | 2025-11-26 | electron microscopy | 3.11 | N.A. | N.A. | 40501890 | 10.1101/2025.05.26.656101 | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKGSLEVLFQ | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.311232 | 0 | 256 | 0 | 230 | 0 | 247 | 0 | 0 | antibody fragment scfv16 | N.A. | mus musculus | N.A. | C;B | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(o) subunit alpha | homo sapiens;homo sapiens | 25;28 | 10;16 | 0.77;0.89 | H_only | train |
9me4_H_L | 9me4 | antibody fragments from mab475 and mab824 bound to the adhesin protein fimh | no | cell adhesion/immune system | 2024-12-06 | 2025-11-26 | electron microscopy | 3.2 | N.A. | N.A. | 41298446 | 10.1038/s41467-025-65666-3 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | QVQLQQSGAELVRPGSSVKISCKASGYAFSSYWMNWVKQRPGQGLEWIGQIYPRDGDTNYNGKFMDKVTLTADKSSNTAYMQLSSLTSEDSAVYFCEVGRGFYGMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKI | ELQMTQSPKFMSTSVGDRVSVTCKASQNVSNVAWYQQKPGQSPKAMIYSASYRYSGVPGRFTGSGSGTDFTLTINNVQSEDLATYFCQQNSSFPFTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | QVQLQQSGAELVRPGSSVKISCKASGYAFSSYWMNWVKQRPGQGLEWIGQIYPRDGDTNYNGKFMDKVTLTADKSSNTAYMQLSSLTSEDSAVYFCEVGRGFYGMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKI | ELQMTQSPKFMSTSVGDRVSVTCKASQNVSNVAWYQQKPGQSPKAMIYSASYRYSGVPGRFTGSGSGTDFTLTINNVQSEDLATYFCQQNSSFPFTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | 23.245575 | 23.229172 | 215 | 213 | 215 | 213 | 215 | 213 | 91 | mab475 heavy chain fragment | mab475 light chain fragment | mus musculus | mus musculus | A | protein | type 1 fimbrin d-mannose specific adhesin | escherichia coli | 19 | 9 | 1 | HL | train |
9me4_I_M | 9me4 | antibody fragments from mab475 and mab824 bound to the adhesin protein fimh | no | cell adhesion/immune system | 2024-12-06 | 2025-11-26 | electron microscopy | 3.2 | N.A. | N.A. | 41298446 | 10.1038/s41467-025-65666-3 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | I | M | EIQLQQSGPERMKPGASVKISCKASGYSFTTYYIHWVKQSHGRSLEWIGYIDPFNDDTNYNQKFKGKATLTVDKSSSTAYMHLSSLTSEDSAVYYCARSYYGSLDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASST | DIQMTQTTSSLSASLGDRVTISCRASQGVNNYLNWYQQKPDGSVKLLIYYTSNLHSGAPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQANMVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEAR | EIQLQQSGPERMKPGASVKISCKASGYSFTTYYIHWVKQSHGRSLEWIGYIDPFNDDTNYNQKFKGKATLTVDKSSSTAYMHLSSLTSEDSAVYYCARSYYGSLDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASST | DIQMTQTTSSLSASLGDRVTISCRASQGVNNYLNWYQQKPDGSVKLLIYYTSNLHSGAPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQANMVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEAR | 23.00376 | 22.850124 | 208 | 197 | 208 | 197 | 208 | 197 | 94 | mab824 heavy chain fragment | mab824 light chain fragment | mus musculus | mus musculus | A | protein | type 1 fimbrin d-mannose specific adhesin | escherichia coli | 52 | 21 | 0.78 | HL | train |
9me5_H_L | 9me5 | antibody fragments from mab824 and mab926 bound to the adhesin protein fimh | no | cell adhesion/immune system | 2024-12-06 | 2025-11-26 | electron microscopy | 3.1 | N.A. | N.A. | 41298446 | 10.1038/s41467-025-65666-3 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV2 | H | L | QVQLQQSGAELATPGASVKMSCKASGYTSTNYWIHWVKQRPGQGLEWIGYINPTSGYTEYNQNFKDKATLTADKSSSTAYMQLTSLTSEDSAVYYCARGVIRDFWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKI | ELVMTQTPLSLPVSLGDQASISCRSSQNIVHNNGNTYLEWYLQSPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | QVQLQQSGAELATPGASVKMSCKASGYTSTNYWIHWVKQRPGQGLEWIGYINPTSGYTEYNQNFKDKATLTADKSSSTAYMQLTSLTSEDSAVYYCARGVIRDFWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKI | ELVMTQTPLSLPVSLGDQASISCRSSQNIVHNNGNTYLEWYLQSPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | 22.98384 | 23.607573 | 212 | 219 | 212 | 219 | 212 | 219 | 94 | mab926 heavy chain fragment | mab926 light chain fragment | mus musculus | mus musculus | A | protein | type 1 fimbrin d-mannose specific adhesin | escherichia coli | 52 | 20 | 0.74 | HL | train |
9me5_I_M | 9me5 | antibody fragments from mab824 and mab926 bound to the adhesin protein fimh | no | cell adhesion/immune system | 2024-12-06 | 2025-11-26 | electron microscopy | 3.1 | N.A. | N.A. | 41298446 | 10.1038/s41467-025-65666-3 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | I | M | EIQLQQSGPERMKPGASVKISCKASGYSFTTYYIHWVKQSHGRSLEWIGYIDPFNDDTNYNQKFKGKATLTVDKSSSTAYMHLSSLTSEDSAVYYCARSYYGSLDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASST | DIQMTQTTSSLSASLGDRVTISCRASQGVNNYLNWYQQKPDGSVKLLIYYTSNLHSGAPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQANMVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEAR | EIQLQQSGPERMKPGASVKISCKASGYSFTTYYIHWVKQSHGRSLEWIGYIDPFNDDTNYNQKFKGKATLTVDKSSSTAYMHLSSLTSEDSAVYYCARSYYGSLDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASST | DIQMTQTTSSLSASLGDRVTISCRASQGVNNYLNWYQQKPDGSVKLLIYYTSNLHSGAPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQANMVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEAR | 23.03185 | 22.772 | 208 | 197 | 208 | 197 | 208 | 197 | 88 | mab824 heavy chain fragment | mab824 light chain fragment | mus musculus | mus musculus | A | protein | type 1 fimbrin d-mannose specific adhesin | escherichia coli | 50 | 19 | 0.79 | HL | train |
9me6_H_L | 9me6 | antibody fragments from mab21, mab475, and mab824 bound to the adhesin protein fimh | no | cell adhesion/immune system | 2024-12-06 | 2025-11-26 | electron microscopy | 3.2 | N.A. | N.A. | 41298446 | 10.1038/s41467-025-65666-3 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | QVQLQQSGAELVRPGSSVKISCKASGYAFSSYWMNWVKQRPGQGLEWIGQIYPRDGDTNYNGKFMDKVTLTADKSSNTAYMQLSSLTSEDSAVYFCEVGRGFYGMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKI | ELQMTQSPKFMSTSVGDRVSVTCKASQNVSNVAWYQQKPGQSPKAMIYSASYRYSGVPGRFTGSGSGTDFTLTINNVQSEDLATYFCQQNSSFPFTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | QVQLQQSGAELVRPGSSVKISCKASGYAFSSYWMNWVKQRPGQGLEWIGQIYPRDGDTNYNGKFMDKVTLTADKSSNTAYMQLSSLTSEDSAVYFCEVGRGFYGMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKI | ELQMTQSPKFMSTSVGDRVSVTCKASQNVSNVAWYQQKPGQSPKAMIYSASYRYSGVPGRFTGSGSGTDFTLTINNVQSEDLATYFCQQNSSFPFTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | 23.251457 | 23.190876 | 215 | 213 | 215 | 213 | 215 | 213 | 93 | mab475 heavy chain fragment | mab475 light chain fragment | mus musculus | mus musculus | A | protein | type 1 fimbrin d-mannose specific adhesin | escherichia coli | 19 | 10 | 1 | HL | train |
9me6_I_M | 9me6 | antibody fragments from mab21, mab475, and mab824 bound to the adhesin protein fimh | no | cell adhesion/immune system | 2024-12-06 | 2025-11-26 | electron microscopy | 3.2 | N.A. | N.A. | 41298446 | 10.1038/s41467-025-65666-3 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | I | M | EIQLQQSGPERMKPGASVKISCKASGYSFTTYYIHWVKQSHGRSLEWIGYIDPFNDDTNYNQKFKGKATLTVDKSSSTAYMHLSSLTSEDSAVYYCARSYYGSLDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASST | DIQMTQTTSSLSASLGDRVTISCRASQGVNNYLNWYQQKPDGSVKLLIYYTSNLHSGAPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQANMVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEAR | EIQLQQSGPERMKPGASVKISCKASGYSFTTYYIHWVKQSHGRSLEWIGYIDPFNDDTNYNQKFKGKATLTVDKSSSTAYMHLSSLTSEDSAVYYCARSYYGSLDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASST | DIQMTQTTSSLSASLGDRVTISCRASQGVNNYLNWYQQKPDGSVKLLIYYTSNLHSGAPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQANMVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEAR | 23.008984 | 22.859226 | 208 | 197 | 208 | 197 | 208 | 197 | 90 | mab824 heavy chain fragment | mab824 light chain fragment | mus musculus | mus musculus | A | protein | type 1 fimbrin d-mannose specific adhesin | escherichia coli | 45 | 19 | 0.76 | HL | train |
9me6_J_N | 9me6 | antibody fragments from mab21, mab475, and mab824 bound to the adhesin protein fimh | no | cell adhesion/immune system | 2024-12-06 | 2025-11-26 | electron microscopy | 3.2 | N.A. | N.A. | 41298446 | 10.1038/s41467-025-65666-3 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | J | N | EVLLKQSGPEKVKPGASVKIPCKASGYTFTDYNIDWVKQSHGTSLEWIGHLDPNSGGTVYNQKFRGKATLTVDKSSSTAYLELRSLTSEDTAVYYCARSTMGVYRSDGYYAMDYWGQGTSVTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSS | QIVLTQSPAIMSASLGEEITLTCSASSSISYMHWYQQKSGTSPKILIYSTSNQASGVPSRFSGSGSGTFYSLTISSVEAEDAADYYCHQWSSYPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTK | EVLLKQSGPEKVKPGASVKIPCKASGYTFTDYNIDWVKQSHGTSLEWIGHLDPNSGGTVYNQKFRGKATLTVDKSSSTAYLELRSLTSEDTAVYYCARSTMGVYRSDGYYAMDYWGQGTSVTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSS | QIVLTQSPAIMSASLGEEITLTCSASSSISYMHWYQQKSGTSPKILIYSTSNQASGVPSRFSGSGSGTFYSLTISSVEAEDAADYYCHQWSSYPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTK | 21.319769 | 22.005295 | 198 | 182 | 198 | 182 | 198 | 182 | 90 | mab21 heavy chain fragment | mab21 light chain fragment | mus musculus | mus musculus | A | protein | type 1 fimbrin d-mannose specific adhesin | escherichia coli | 37 | 17 | 0.89 | HL | train |
9me7_I_M | 9me7 | antibody fragments from mab21 and mab824 bound to the adhesin protein fimh containing alpha-methyl mannose | no | cell adhesion/immune system | 2024-12-06 | 2025-11-26 | electron microscopy | 3.1 | N.A. | N.A. | 41298446 | 10.1038/s41467-025-65666-3 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | I | M | EIQLQQSGPERMKPGASVKISCKASGYSFTTYYIHWVKQSHGRSLEWIGYIDPFNDDTNYNQKFKGKATLTVDKSSSTAYMHLSSLTSEDSAVYYCARSYYGSLDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASST | DIQMTQTTSSLSASLGDRVTISCRASQGVNNYLNWYQQKPDGSVKLLIYYTSNLHSGAPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQANMVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEAR | EIQLQQSGPERMKPGASVKISCKASGYSFTTYYIHWVKQSHGRSLEWIGYIDPFNDDTNYNQKFKGKATLTVDKSSSTAYMHLSSLTSEDSAVYYCARSYYGSLDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASST | DIQMTQTTSSLSASLGDRVTISCRASQGVNNYLNWYQQKPDGSVKLLIYYTSNLHSGAPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQANMVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEAR | 23.027391 | 22.879412 | 208 | 197 | 208 | 197 | 208 | 197 | 93 | mab824 heavy chain fragment | mab824 light chain fragment | mus musculus | mus musculus | A | protein | type 1 fimbrin d-mannose specific adhesin | escherichia coli | 42 | 19 | 0.83 | HL | train |
9me7_J_N | 9me7 | antibody fragments from mab21 and mab824 bound to the adhesin protein fimh containing alpha-methyl mannose | no | cell adhesion/immune system | 2024-12-06 | 2025-11-26 | electron microscopy | 3.1 | N.A. | N.A. | 41298446 | 10.1038/s41467-025-65666-3 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | J | N | EVLLKQSGPEKVKPGASVKIPCKASGYTFTDYNIDWVKQSHGTSLEWIGHLDPNSGGTVYNQKFRGKATLTVDKSSSTAYLELRSLTSEDTAVYYCARSTMGVYRSDGYYAMDYWGQGTSVTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSS | QIVLTQSPAIMSASLGEEITLTCSASSSISYMHWYQQKSGTSPKILIYSTSNQASGVPSRFSGSGSGTFYSLTISSVEAEDAADYYCHQWSSYPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTK | EVLLKQSGPEKVKPGASVKIPCKASGYTFTDYNIDWVKQSHGTSLEWIGHLDPNSGGTVYNQKFRGKATLTVDKSSSTAYLELRSLTSEDTAVYYCARSTMGVYRSDGYYAMDYWGQGTSVTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSS | QIVLTQSPAIMSASLGEEITLTCSASSSISYMHWYQQKSGTSPKILIYSTSNQASGVPSRFSGSGSGTFYSLTISSVEAEDAADYYCHQWSSYPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTK | 21.367102 | 22.010801 | 198 | 182 | 198 | 182 | 198 | 182 | 87 | mab21 heavy chain fragment | mab21 light chain fragment | mus musculus | mus musculus | A | protein | type 1 fimbrin d-mannose specific adhesin | escherichia coli | 39 | 18 | 0.9 | HL | train |
9kxs_H | 9kxs | structure of ep67 bound mouse c5ar1 in complex with go | yes | signaling protein | 2024-12-07 | 2025-11-26 | electron microscopy | 3.31 | N.A. | N.A. | 40501890 | 10.1101/2025.05.26.656101 | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKGSLEVLFQ | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | 18.064398 | 0 | 256 | 0 | 234 | 0 | 248 | 0 | 0 | antibody fragment scfv16 | N.A. | mus musculus | N.A. | C;B | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(o) subunit alpha | homo sapiens;homo sapiens | 21;28 | 10;17 | 0.83;0.94 | H_only | train |
9mer_H_L | 9mer | structure of h1h5:flua20 chimeric influenza ha complex | no | viral protein/immune system | 2024-12-08 | 2025-03-19 | x-ray diffraction | 2 | 0.215 | 0.206 | 40027756 | 10.1101/2024.12.17.628867 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | H | L | QVQLEESGPGLVKPSETLSLTCSVSGVSVTSDIYYWTWIRQPPGKGLEWIGYIFYNGDTNYNPSLKSRVTMSIDTSKNEFSLRLTSVTAADTAVYFCARGTEDLGYCSSGSCPNHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCHHHHHH | DIVMTQSPSSLSASIGDRVTITCRPSQNIRSFLNWFQHKPGKAPKLLIYAASNLQSGVPSRFSGSGSGTEFTLTIRSLQPEDFATYYCQQSYNTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLEESGPGLVKPSETLSLTCSVSGVSVTSDIYYWTWIRQPPGKGLEWIGYIFYNGDTNYNPSLKSRVTMSIDTSKNEFSLRLTSVTAADTAVYFCARGTEDLGYCSSGSCPNHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | DIVMTQSPSSLSASIGDRVTITCRPSQNIRSFLNWFQHKPGKAPKLLIYAASNLQSGVPSRFSGSGSGTEFTLTIRSLQPEDFATYYCQQSYNTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.163044 | 23.47945 | 235 | 214 | 227 | 214 | 227 | 214 | 102 | flua20 heavy chain fab | flua20 light chain fab | homo sapiens | homo sapiens | B | protein | h1h5 ha | influenza a virus | 35 | 15 | 0.79 | HL | train |
9hml_C | 9hml | kir2dl1 bound to rifin pfke01_040007400 | no | immune system | 2024-12-09 | 2025-04-09 | x-ray diffraction | 2.17 | 0.232 | 0.221 | 40500441 | 10.1038/s41586-025-09091-y | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | QRQLVESGGGLVQPGGSLRLSCAASGRSFSDYTMGWFRQAPGKEREFVAAISWSGGSTYADSVKGRFIISRDNVKNTVYLQMNSLEPEDTAVYYCAAERTGWSSEYDYWGKGTPVTVSSGHHHHHH | N.A. | QRQLVESGGGLVQPGGSLRLSCAASGRSFSDYTMGWFRQAPGKEREFVAAISWSGGSTYADSVKGRFIISRDNVKNTVYLQMNSLEPEDTAVYYCAAERTGWSSEYDYWGKGTPVTVSS | N.A. | 13.804437 | 0 | 126 | 0 | 119 | 0 | 119 | 0 | 0 | nanobody nb1 | N.A. | escherichia coli | N.A. | B | protein | kir2dl protein | homo sapiens | 40 | 12 | 0.92 | H_only | train |
9mfg_G | 9mfg | complex of il23 receptor and vhh | no | immune system | 2024-12-09 | 2025-05-21 | x-ray diffraction | 2.85 | 0.246 | 0.204 | 40434646 | 10.1073/pnas.2501635122 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | G | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGFTFSTYAMAWFRQAPGKEREFVAESWSSGTTYYGASVVGRFTMSRDDSKNTVYLQMNSLRAEDTAVYYCAAKRPDAGWQTYDYWGQGTLVTVSS | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGFTFSTYAMAWFRQAPGKEREFVAESWSSGTTYYGASVVGRFTMSRDDSKNTVYLQMNSLRAEDTAVYYCAAKRPDAGWQTYDYWGQGTLVTVSS | N.A. | 13.587969 | 0 | 120 | 0 | 120 | 0 | 120 | 0 | 0 | vhh | N.A. | lama glama | N.A. | A | protein | interleukin-23 receptor | homo sapiens | 47 | 11 | 0.48 | H_only | train |
9mfg_H | 9mfg | complex of il23 receptor and vhh | no | immune system | 2024-12-09 | 2025-05-21 | x-ray diffraction | 2.85 | 0.246 | 0.204 | 40434646 | 10.1073/pnas.2501635122 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | H | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGFTFSTYAMAWFRQAPGKEREFVAESWSSGTTYYGASVVGRFTMSRDDSKNTVYLQMNSLRAEDTAVYYCAAKRPDAGWQTYDYWGQGTLVTVSS | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGFTFSTYAMAWFRQAPGKEREFVAESWSSGTTYYGASVVGRFTMSRDDSKNTVYLQMNSLRAEDTAVYYCAAKRPDAGWQTYDYWGQGTLVTVSS | N.A. | 13.607423 | 0 | 120 | 0 | 120 | 0 | 120 | 0 | 0 | vhh | N.A. | lama glama | N.A. | B | protein | interleukin-23 receptor | homo sapiens | 50 | 11 | 0.46 | H_only | train |
9mfg_F | 9mfg | complex of il23 receptor and vhh | no | immune system | 2024-12-09 | 2025-05-21 | x-ray diffraction | 2.85 | 0.246 | 0.204 | 40434646 | 10.1073/pnas.2501635122 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGFTFSTYAMAWFRQAPGKEREFVAESWSSGTTYYGASVVGRFTMSRDDSKNTVYLQMNSLRAEDTAVYYCAAKRPDAGWQTYDYWGQGTLVTVSS | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGFTFSTYAMAWFRQAPGKEREFVAESWSSGTTYYGASVVGRFTMSRDDSKNTVYLQMNSLRAEDTAVYYCAAKRPDAGWQTYDYWGQGTLVTVSS | N.A. | 13.609348 | 0 | 120 | 0 | 120 | 0 | 120 | 0 | 0 | vhh | N.A. | lama glama | N.A. | C | protein | interleukin-23 receptor | homo sapiens | 52 | 12 | 0.46 | H_only | train |
9mfg_E | 9mfg | complex of il23 receptor and vhh | no | immune system | 2024-12-09 | 2025-05-21 | x-ray diffraction | 2.85 | 0.246 | 0.204 | 40434646 | 10.1073/pnas.2501635122 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGFTFSTYAMAWFRQAPGKEREFVAESWSSGTTYYGASVVGRFTMSRDDSKNTVYLQMNSLRAEDTAVYYCAAKRPDAGWQTYDYWGQGTLVTVSS | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGFTFSTYAMAWFRQAPGKEREFVAESWSSGTTYYGASVVGRFTMSRDDSKNTVYLQMNSLRAEDTAVYYCAAKRPDAGWQTYDYWGQGTLVTVSS | N.A. | 13.608964 | 0 | 120 | 0 | 120 | 0 | 120 | 0 | 0 | vhh | N.A. | lama glama | N.A. | D | protein | interleukin-23 receptor | homo sapiens | 52 | 11 | 0.41 | H_only | train |
9kyu_I_M | 9kyu | structure of beta-arrestin1 in complex with mouse c5ar1pp | no | signaling protein | 2024-12-09 | 2025-11-26 | electron microscopy | 2.72 | N.A. | N.A. | 40501890 | 10.1101/2025.05.26.656101 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | I | M | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKGLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRQFWYSGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHHHHHHHH | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYKYVPVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKGLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRQFWYSGLDYWGQGTLVTV | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYKYVPVTFGQGTKVEI | 13.575439 | 12.919971 | 237 | 215 | 117 | 106 | 117 | 106 | 37 | fab30 heavy chain | fab30 light chain | mus musculus | mus musculus | A | protein | beta-arrestin-1 | rattus norvegicus | 32 | 12 | 0.92 | HL | train |
9kyu_R_Q | 9kyu | structure of beta-arrestin1 in complex with mouse c5ar1pp | no | signaling protein | 2024-12-09 | 2025-11-26 | electron microscopy | 2.72 | N.A. | N.A. | 40501890 | 10.1101/2025.05.26.656101 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | R | Q | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKGLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRQFWYSGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHHHHHHHH | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYKYVPVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKGLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRQFWYSGLDYWGQGTLVTV | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYKYVPVTFGQGTKVEI | 13.563114 | 12.956395 | 237 | 215 | 117 | 106 | 117 | 106 | 36 | fab30 heavy chain | fab30 light chain | mus musculus | mus musculus | D | protein | beta-arrestin-1 | rattus norvegicus | 32 | 12 | 0.92 | HL | train |
9kz2_H | 9kz2 | structure of ep67 bound human c3ar in complex with go | yes | signaling protein | 2024-12-09 | 2025-11-26 | electron microscopy | 3.43 | N.A. | N.A. | 40501890 | 10.1101/2025.05.26.656101 | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | 17.566263 | 0 | 248 | 0 | 234 | 0 | 248 | 0 | 0 | antibody fragment - scfv16 | N.A. | mus musculus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(o) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 23;21 | 13;8 | 0.93;0.73 | H_only | train |
9mgb_c | 9mgb | scfv antibody cl33 bound to r-phycoerythrin | no | immune system | 2024-12-10 | 2025-08-06 | electron microscopy | 2.1 | N.A. | N.A. | 40744007 | 10.1016/j.str.2025.07.006 | 0 | auth_asym_id | scFv | N.A. | N.A. | c | N.A. | MVHSEVQLQQSGAELARPGASVKLSCKASGYTFTSYGISWVKQRTGQGLEWIGEIYPRSGNTYYNEKFKGKATLTADKSSSTAYMELRSLTSEDSAVYFCARQGYYANSQFTYWGQGTLVTVSAAAGGGGSGGGGSGGGGSVHSDIQMTQTTSSLSASLGDRVTISCSASQGISNYLNWYQQKPDGTVKLLIYYTSSLHSGVPSRFSGSGSGTDYSLTISNLEPEDIATYYCQQYSKLPWTFGGGTNLEIKHHHHHH | N.A. | EVQLQQSGAELARPGASVKLSCKASGYTFTSYGISWVKQRTGQGLEWIGEIYPRSGNTYYNEKFKGKATLTADKSSSTAYMELRSLTSEDSAVYFCARQGYYANSQFTYWGQGTLVTVSAAAGGGGSGGGGSGGGGSVHSDIQMTQTTSSLSASLGDRVTISCSASQGISNYLNWYQQKPDGTVKLLIYYTSSLHSGVPSRFSGSGSGTDYSLTISNLEPEDIATYYCQQYSKLPWTFGGGTNLEI | N.A. | 16.797316 | 0 | 257 | 0 | 225 | 0 | 246 | 0 | 0 | cl33 scfv | N.A. | mus musculus | N.A. | A | protein | r-phycoerythrin alpha chain | neopyropia tenera | 41 | 17 | 0.81 | H_only | train |
9mgb_i | 9mgb | scfv antibody cl33 bound to r-phycoerythrin | no | immune system | 2024-12-10 | 2025-08-06 | electron microscopy | 2.1 | N.A. | N.A. | 40744007 | 10.1016/j.str.2025.07.006 | 0 | auth_asym_id | scFv | N.A. | N.A. | i | N.A. | MVHSEVQLQQSGAELARPGASVKLSCKASGYTFTSYGISWVKQRTGQGLEWIGEIYPRSGNTYYNEKFKGKATLTADKSSSTAYMELRSLTSEDSAVYFCARQGYYANSQFTYWGQGTLVTVSAAAGGGGSGGGGSGGGGSVHSDIQMTQTTSSLSASLGDRVTISCSASQGISNYLNWYQQKPDGTVKLLIYYTSSLHSGVPSRFSGSGSGTDYSLTISNLEPEDIATYYCQQYSKLPWTFGGGTNLEIKHHHHHH | N.A. | EVQLQQSGAELARPGASVKLSCKASGYTFTSYGISWVKQRTGQGLEWIGEIYPRSGNTYYNEKFKGKATLTADKSSSTAYMELRSLTSEDSAVYFCARQGYYANSQFTYWGQGTLVTVSAAAGGGGSGGGGSGGGGSVHSDIQMTQTTSSLSASLGDRVTISCSASQGISNYLNWYQQKPDGTVKLLIYYTSSLHSGVPSRFSGSGSGTDYSLTISNLEPEDIATYYCQQYSKLPWTFGGGTNLEI | N.A. | 16.775654 | 0 | 257 | 0 | 225 | 0 | 246 | 0 | 0 | cl33 scfv | N.A. | mus musculus | N.A. | C | protein | r-phycoerythrin alpha chain | neopyropia tenera | 43 | 17 | 0.77 | H_only | train |
9mgb_a | 9mgb | scfv antibody cl33 bound to r-phycoerythrin | no | immune system | 2024-12-10 | 2025-08-06 | electron microscopy | 2.1 | N.A. | N.A. | 40744007 | 10.1016/j.str.2025.07.006 | 0 | auth_asym_id | scFv | N.A. | N.A. | a | N.A. | MVHSEVQLQQSGAELARPGASVKLSCKASGYTFTSYGISWVKQRTGQGLEWIGEIYPRSGNTYYNEKFKGKATLTADKSSSTAYMELRSLTSEDSAVYFCARQGYYANSQFTYWGQGTLVTVSAAAGGGGSGGGGSGGGGSVHSDIQMTQTTSSLSASLGDRVTISCSASQGISNYLNWYQQKPDGTVKLLIYYTSSLHSGVPSRFSGSGSGTDYSLTISNLEPEDIATYYCQQYSKLPWTFGGGTNLEIKHHHHHH | N.A. | EVQLQQSGAELARPGASVKLSCKASGYTFTSYGISWVKQRTGQGLEWIGEIYPRSGNTYYNEKFKGKATLTADKSSSTAYMELRSLTSEDSAVYFCARQGYYANSQFTYWGQGTLVTVSAAAGGGGSGGGGSGGGGSVHSDIQMTQTTSSLSASLGDRVTISCSASQGISNYLNWYQQKPDGTVKLLIYYTSSLHSGVPSRFSGSGSGTDYSLTISNLEPEDIATYYCQQYSKLPWTFGGGTNLEI | N.A. | 16.78897 | 0 | 257 | 0 | 225 | 0 | 246 | 0 | 0 | cl33 scfv | N.A. | mus musculus | N.A. | F | protein | r-phycoerythrin alpha chain | neopyropia tenera | 40 | 17 | 0.85 | H_only | train |
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