PDB_ID_chain stringlengths 6 10 | PDB_ID stringlengths 4 4 | Title stringlengths 4 230 | Mutation(s) stringclasses 2
values | Classification stringclasses 305
values | Deposit_date stringdate 1976-03-17 00:00:00 2026-01-20 00:00:00 | Release_date stringdate 1976-05-19 00:00:00 2026-02-25 00:00:00 | Method stringclasses 5
values | Resolution stringclasses 459
values | R_free stringclasses 227
values | R_work stringclasses 211
values | PMID stringlengths 4 8 | DOI stringlengths 4 68 | Model_index int64 0 76 | Asym_ID_type stringclasses 2
values | Ab_type stringclasses 30
values | H_subgroup stringclasses 8
values | L_subgroup stringclasses 19
values | H_chain_ID stringclasses 60
values | L_chain_ID stringclasses 58
values | H_fas_seq stringlengths 4 919 | L_fas_seq stringlengths 4 627 | H_filled_pdb_seq stringlengths 4 896 | L_filled_pdb_seq stringlengths 4 523 | H_mean_radius float64 0 79.7 | L_mean_radius float64 0 84.3 | H_fas_seq_len int64 0 919 | L_fas_seq_len int64 0 627 | H_pdb_seq_len int64 0 879 | L_pdb_seq_len int64 0 523 | H_filled_seq_len int64 0 896 | L_filled_seq_len int64 0 523 | HL_inf_res_num int64 0 175 | H_mol_name stringlengths 2 331 | L_mol_name stringlengths 2 151 | H_species stringclasses 68
values | L_species stringclasses 42
values | Ag_chain_ID(s) stringclasses 279
values | Ag_type(s) stringclasses 16
values | Ag_mol_name(s) stringlengths 2 390 | Ag_species stringclasses 743
values | Ab_ag_inf_res_num stringlengths 1 11 | CDR_inf_res_num stringclasses 444
values | CDR_inf_res_ratio stringlengths 1 19 | hl_label stringclasses 3
values | split stringclasses 1
value |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
7k8x_D_F | 7k8x | structure of the sars-cov-2 s 2p trimer in complex with the human neutralizing antibody fab fragment, c121 (state 1) | no | viral protein/immune system | 2020-09-27 | 2020-10-21 | electron microscopy | 3.9 | N.A. | N.A. | 33045718 | 10.1038/s41586-020-2852-1 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | D | F | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWISPVSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARAPLFPTGVLAGDYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEGSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTLVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWISPVSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARAPLFPTGVLAGDYYYYGMDVWGQGTTVTVS | ALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEGSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTLVFGGGTKLTVL | 14.438384 | 13.067867 | 241 | 216 | 128 | 108 | 128 | 108 | 39 | c121 fab heavy chain | c121 fab light chain | homo sapiens | homo sapiens | B;C | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 43;30 | 18;5 | 0.82;0.31 | HL | train |
7k8y_G_I | 7k8y | structure of the sars-cov-2 s 2p trimer in complex with the human neutralizing antibody fab fragment, c121 (state 2) | no | viral protein/immune system | 2020-09-27 | 2020-10-21 | electron microscopy | 4.4 | N.A. | N.A. | 33045718 | 10.1038/s41586-020-2852-1 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | G | I | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWISPVSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARAPLFPTGVLAGDYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEGSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTLVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWISPVSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARAPLFPTGVLAGDYYYYGMDVWGQGTTVTVS | ALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEGSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTLVFGGGTKLTVL | 14.131076 | 12.876162 | 241 | 216 | 128 | 108 | 128 | 108 | 41 | c121 fab heavy chain | c121 fab light chain | homo sapiens | homo sapiens | B;D | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 44;18 | 20;7 | 0.8;0.64 | HL | train |
7k8z_H_L | 7k8z | structure of the sars-cov-2 s 2p trimer in complex with the human neutralizing antibody fab fragment, c135 | no | viral protein/immune system | 2020-09-27 | 2020-10-21 | electron microscopy | 3.5 | N.A. | N.A. | 33045718 | 10.1038/s41586-020-2852-1 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVIPFDGRNKYYADSVTGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCASSSGYLFHSDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | DIQMTQSPSTLSASVGDRVTITCRASQSISNWLAWFQQKPGKAPKLLIYEASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVIPFDGRNKYYADSVTGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCASSSGYLFHSDYWGQGTLVTVS | DIQMTQSPSTLSASVGDRVTITCRASQSISNWLAWFQQKPGKAPKLLIYEASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYPWTFGQGTKVEI | 13.445262 | 12.963397 | 231 | 214 | 118 | 106 | 118 | 106 | 37 | c135 fab heavy chain | c135 fab light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 28 | 14 | 0.93 | HL | train |
7k8z_M_N | 7k8z | structure of the sars-cov-2 s 2p trimer in complex with the human neutralizing antibody fab fragment, c135 | no | viral protein/immune system | 2020-09-27 | 2020-10-21 | electron microscopy | 3.5 | N.A. | N.A. | 33045718 | 10.1038/s41586-020-2852-1 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | M | N | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVIPFDGRNKYYADSVTGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCASSSGYLFHSDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | DIQMTQSPSTLSASVGDRVTITCRASQSISNWLAWFQQKPGKAPKLLIYEASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVIPFDGRNKYYADSVTGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCASSSGYLFHSDYWGQGTLVTV | DIQMTQSPSTLSASVGDRVTITCRASQSISNWLAWFQQKPGKAPKLLIYEASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYPWTFGQGTKVEI | 13.421267 | 12.963388 | 231 | 214 | 117 | 106 | 117 | 106 | 41 | c135 fab heavy chain | c135 fab light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 29 | 16 | 0.94 | HL | train |
7k90_M_N | 7k90 | structure of the sars-cov-2 s 6p trimer in complex with the human neutralizing antibody fab fragment, c144 | no | viral protein/immune system | 2020-09-27 | 2020-10-21 | electron microscopy | 3.24 | N.A. | N.A. | 33045718 | 10.1038/s41586-020-2852-1 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV2 | M | N | EVQLVESGGGLIQPGGSLRLSCAASGFTVSNNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDKSKNTLYLQMNRLRAEDTAVYYCAREGEVEGYNDFWSGYSRDRYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTRVFGTGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLVESGGGLIQPGGSLRLSCAASGFTVSNNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDKSKNTLYLQMNRLRAEDTAVYYCAREGEVEGYNDFWSGYSRDRYYFDYWGQGTLVTVS | ALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTRVFGTGTKVTVL | 15.199274 | 13.11189 | 243 | 216 | 129 | 108 | 129 | 108 | 48 | c144 fab heavy chain | c144 fab light chain | homo sapiens | homo sapiens | A;B | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 43;22 | 20;9 | 0.87;1.0 | HL | train |
7k90_O_P | 7k90 | structure of the sars-cov-2 s 6p trimer in complex with the human neutralizing antibody fab fragment, c144 | no | viral protein/immune system | 2020-09-27 | 2020-10-21 | electron microscopy | 3.24 | N.A. | N.A. | 33045718 | 10.1038/s41586-020-2852-1 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV2 | O | P | EVQLVESGGGLIQPGGSLRLSCAASGFTVSNNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDKSKNTLYLQMNRLRAEDTAVYYCAREGEVEGYNDFWSGYSRDRYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTRVFGTGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLVESGGGLIQPGGSLRLSCAASGFTVSNNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDKSKNTLYLQMNRLRAEDTAVYYCAREGEVEGYNDFWSGYSRDRYYFDYWGQGTLVTVS | ALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTRVFGTGTKVTVL | 15.19803 | 13.106778 | 243 | 216 | 129 | 108 | 129 | 108 | 48 | c144 fab heavy chain | c144 fab light chain | homo sapiens | homo sapiens | A;C | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 22;44 | 9;20 | 1.0;0.87 | HL | train |
7k90_H_L | 7k90 | structure of the sars-cov-2 s 6p trimer in complex with the human neutralizing antibody fab fragment, c144 | no | viral protein/immune system | 2020-09-27 | 2020-10-21 | electron microscopy | 3.24 | N.A. | N.A. | 33045718 | 10.1038/s41586-020-2852-1 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV2 | H | L | EVQLVESGGGLIQPGGSLRLSCAASGFTVSNNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDKSKNTLYLQMNRLRAEDTAVYYCAREGEVEGYNDFWSGYSRDRYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTRVFGTGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLVESGGGLIQPGGSLRLSCAASGFTVSNNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDKSKNTLYLQMNRLRAEDTAVYYCAREGEVEGYNDFWSGYSRDRYYFDYWGQGTLVTVS | ALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTRVFGTGTKVTVL | 15.219125 | 13.108188 | 243 | 216 | 129 | 108 | 129 | 108 | 48 | c144 fab heavy chain | c144 fab light chain | homo sapiens | homo sapiens | B;C | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 42;18 | 19;7 | 0.86;1.0 | HL | train |
7d5p_C | 7d5p | structure of norc transporter in an outward-open conformation in complex with a single-chain indian camelid antibody | no | membrane protein | 2020-09-27 | 2021-06-09 | x-ray diffraction | 3.65 | 0.318 | 0.297 | 34226658 | 10.1038/s42003-021-02357-x | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | QVQLEESGGGSVQAGGSLRLSCAASGYMYSTYSTYCMGWFRQAPGKEREGVAFIKRGDHSTYYTDSVKGRFTISQDSAKNTVSLQMNNLKPEDTAIYYCAADFAHSFLLSVHSGAGQYSYWGQGTQVTVSS | N.A. | QVQLEESGGGSVQAGGSLRLSCAASGYMYSTYSTYCMGWFRQAPGKEREGVAFIKRGDHSTYYTDSVKGRFTISQDSAKNTVSLQMNNLKPEDTAIYYCAADFAHSFLLSVHSGAGQYSYWGQGTQVTVSS | N.A. | 14.408893 | 0 | 131 | 0 | 131 | 0 | 131 | 0 | 0 | icab | N.A. | camelus dromedarius | N.A. | A | protein | drug transporter, putative | staphylococcus aureus subsp. aureus col | 67 | 22 | 0.85 | H_only | train |
7d5p_D | 7d5p | structure of norc transporter in an outward-open conformation in complex with a single-chain indian camelid antibody | no | membrane protein | 2020-09-27 | 2021-06-09 | x-ray diffraction | 3.65 | 0.318 | 0.297 | 34226658 | 10.1038/s42003-021-02357-x | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | QVQLEESGGGSVQAGGSLRLSCAASGYMYSTYSTYCMGWFRQAPGKEREGVAFIKRGDHSTYYTDSVKGRFTISQDSAKNTVSLQMNNLKPEDTAIYYCAADFAHSFLLSVHSGAGQYSYWGQGTQVTVSS | N.A. | QVQLEESGGGSVQAGGSLRLSCAASGYMYSTYSTYCMGWFRQAPGKEREGVAFIKRGDHSTYYTDSVKGRFTISQDSAKNTVSLQMNNLKPEDTAIYYCAADFAHSFLLSVHSGAGQYSYWGQGTQVTVSS | N.A. | 14.406273 | 0 | 131 | 0 | 131 | 0 | 131 | 0 | 0 | icab | N.A. | camelus dromedarius | N.A. | B | protein | drug transporter, putative | staphylococcus aureus subsp. aureus col | 66 | 22 | 0.85 | H_only | train |
7d5q_C | 7d5q | structure of norc transporter (k398a mutant) in an outward-open conformation in complex with a single-chain indian camelid antibody | yes | membrane protein | 2020-09-27 | 2021-06-09 | x-ray diffraction | 3.6 | 0.315 | 0.308 | 34226658 | 10.1038/s42003-021-02357-x | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | QVQLEESGGGSVQAGGSLRLSCAASGYMYSTYSTYCMGWFRQAPGKEREGVAFIKRGDHSTYYTDSVKGRFTISQDSAKNTVSLQMNNLKPEDTAIYYCAADFAHSFLLSVHSGAGQYSYWGQGTQVTVSS | N.A. | QVQLEESGGGSVQAGGSLRLSCAASGYMYSTYSTYCMGWFRQAPGKEREGVAFIKRGDHSTYYTDSVKGRFTISQDSAKNTVSLQMNNLKPEDTAIYYCAADFAHSFLLSVHSGAGQYSYWGQGTQVTVSS | N.A. | 14.361865 | 0 | 131 | 0 | 131 | 0 | 131 | 0 | 0 | icab | N.A. | camelus dromedarius | N.A. | A | protein | drug transporter, putative | staphylococcus aureus subsp. aureus col | 71 | 25 | 0.86 | H_only | train |
7d5q_D | 7d5q | structure of norc transporter (k398a mutant) in an outward-open conformation in complex with a single-chain indian camelid antibody | yes | membrane protein | 2020-09-27 | 2021-06-09 | x-ray diffraction | 3.6 | 0.315 | 0.308 | 34226658 | 10.1038/s42003-021-02357-x | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | QVQLEESGGGSVQAGGSLRLSCAASGYMYSTYSTYCMGWFRQAPGKEREGVAFIKRGDHSTYYTDSVKGRFTISQDSAKNTVSLQMNNLKPEDTAIYYCAADFAHSFLLSVHSGAGQYSYWGQGTQVTVSS | N.A. | QVQLEESGGGSVQAGGSLRLSCAASGYMYSTYSTYCMGWFRQAPGKEREGVAFIKRGDHSTYYTDSVKGRFTISQDSAKNTVSLQMNNLKPEDTAIYYCAADFAHSFLLSVHSGAGQYSYWGQGTQVTVSS | N.A. | 14.353087 | 0 | 131 | 0 | 131 | 0 | 131 | 0 | 0 | icab | N.A. | camelus dromedarius | N.A. | B | protein | drug transporter, putative | staphylococcus aureus subsp. aureus col | 65 | 23 | 0.85 | H_only | train |
7k93_E | 7k93 | denv2 ns1 in complex with neutralizing 2b7 single chain fab variable region (scfv) | no | viral protein | 2020-09-28 | 2020-12-23 | x-ray diffraction | 2.89 | 0.269 | 0.223 | 33414220 | 10.1126/science.abc0476 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | SNAEVQLQQSGPELVKPGASVKMSCKASGCTLTNCFMHWMKQKPGQDLEWIGYINPYNDMTKYSENFKGKATLTSDKSSSTAFMELSSLTSEDSAVYYCARGYLLRTGCFDYWGQGTTLTVSSGGSGGGSGGGSGGGSGGNIVLTQSPASLAVSLGQRATISCRASESVDSYGYSFMHWYQQKPGQPPKVLIYLASNLESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQNNENPLTFGAGTKLELK | N.A. | EVQLQQSGPELVKPGASVKMSCKASGCTLTNCFMHWMKQKPGQDLEWIGYINPYNDMTKYSENFKGKATLTSDKSSSTAFMELSSLTSEDSAVYYCARGYLLRTGCFDYWGQGTTLTVSSGGSGGGSGGGSGGGSGGNIVLTQSPASLAVSLGQRATISCRASESVDSYGYSFMHWYQQKPGQPPKVLIYLASNLESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQNNENPLTFGAGTKLELK | N.A. | 17.521898 | 0 | 251 | 0 | 233 | 0 | 248 | 0 | 0 | 2b7 single chain fab variable region | N.A. | mus musculus | N.A. | A | protein | non-structural protein 1 | dengue virus 2 | 42 | 14 | 0.78 | H_only | train |
7k93_G | 7k93 | denv2 ns1 in complex with neutralizing 2b7 single chain fab variable region (scfv) | no | viral protein | 2020-09-28 | 2020-12-23 | x-ray diffraction | 2.89 | 0.269 | 0.223 | 33414220 | 10.1126/science.abc0476 | 0 | auth_asym_id | scFv | N.A. | N.A. | G | N.A. | SNAEVQLQQSGPELVKPGASVKMSCKASGCTLTNCFMHWMKQKPGQDLEWIGYINPYNDMTKYSENFKGKATLTSDKSSSTAFMELSSLTSEDSAVYYCARGYLLRTGCFDYWGQGTTLTVSSGGSGGGSGGGSGGGSGGNIVLTQSPASLAVSLGQRATISCRASESVDSYGYSFMHWYQQKPGQPPKVLIYLASNLESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQNNENPLTFGAGTKLELK | N.A. | EVQLQQSGPELVKPGASVKMSCKASGCTLTNCFMHWMKQKPGQDLEWIGYINPYNDMTKYSENFKGKATLTSDKSSSTAFMELSSLTSEDSAVYYCARGYLLRTGCFDYWGQGTTLTVSSGGSGGGSGGGSGGGSGGNIVLTQSPASLAVSLGQRATISCRASESVDSYGYSFMHWYQQKPGQPPKVLIYLASNLESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQNNENPLTFGAGTKLELK | N.A. | 17.481504 | 0 | 251 | 0 | 232 | 0 | 248 | 0 | 0 | 2b7 single chain fab variable region | N.A. | mus musculus | N.A. | B | protein | non-structural protein 1 | dengue virus 2 | 40 | 16 | 0.89 | H_only | train |
7k93_I | 7k93 | denv2 ns1 in complex with neutralizing 2b7 single chain fab variable region (scfv) | no | viral protein | 2020-09-28 | 2020-12-23 | x-ray diffraction | 2.89 | 0.269 | 0.223 | 33414220 | 10.1126/science.abc0476 | 0 | auth_asym_id | scFv | N.A. | N.A. | I | N.A. | SNAEVQLQQSGPELVKPGASVKMSCKASGCTLTNCFMHWMKQKPGQDLEWIGYINPYNDMTKYSENFKGKATLTSDKSSSTAFMELSSLTSEDSAVYYCARGYLLRTGCFDYWGQGTTLTVSSGGSGGGSGGGSGGGSGGNIVLTQSPASLAVSLGQRATISCRASESVDSYGYSFMHWYQQKPGQPPKVLIYLASNLESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQNNENPLTFGAGTKLELK | N.A. | EVQLQQSGPELVKPGASVKMSCKASGCTLTNCFMHWMKQKPGQDLEWIGYINPYNDMTKYSENFKGKATLTSDKSSSTAFMELSSLTSEDSAVYYCARGYLLRTGCFDYWGQGTTLTVSSGGSGGGSGGGSGGGSGGNIVLTQSPASLAVSLGQRATISCRASESVDSYGYSFMHWYQQKPGQPPKVLIYLASNLESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQNNENPLTFGAGTKLELK | N.A. | 17.558525 | 0 | 251 | 0 | 232 | 0 | 248 | 0 | 0 | 2b7 single chain fab variable region | N.A. | mus musculus | N.A. | C | protein | non-structural protein 1 | dengue virus 2 | 37 | 15 | 0.94 | H_only | train |
7k93_K | 7k93 | denv2 ns1 in complex with neutralizing 2b7 single chain fab variable region (scfv) | no | viral protein | 2020-09-28 | 2020-12-23 | x-ray diffraction | 2.89 | 0.269 | 0.223 | 33414220 | 10.1126/science.abc0476 | 0 | auth_asym_id | scFv | N.A. | N.A. | K | N.A. | SNAEVQLQQSGPELVKPGASVKMSCKASGCTLTNCFMHWMKQKPGQDLEWIGYINPYNDMTKYSENFKGKATLTSDKSSSTAFMELSSLTSEDSAVYYCARGYLLRTGCFDYWGQGTTLTVSSGGSGGGSGGGSGGGSGGNIVLTQSPASLAVSLGQRATISCRASESVDSYGYSFMHWYQQKPGQPPKVLIYLASNLESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQNNENPLTFGAGTKLELK | N.A. | EVQLQQSGPELVKPGASVKMSCKASGCTLTNCFMHWMKQKPGQDLEWIGYINPYNDMTKYSENFKGKATLTSDKSSSTAFMELSSLTSEDSAVYYCARGYLLRTGCFDYWGQGTTLTVSSGGSGGGSGGGSGGGSGGNIVLTQSPASLAVSLGQRATISCRASESVDSYGYSFMHWYQQKPGQPPKVLIYLASNLESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQNNENPLTFGAGTKLELK | N.A. | 17.47584 | 0 | 251 | 0 | 232 | 0 | 248 | 0 | 0 | 2b7 single chain fab variable region | N.A. | mus musculus | N.A. | D | protein | non-structural protein 1 | dengue virus 2 | 42 | 15 | 0.79 | H_only | train |
7d5u_D | 7d5u | bace2 xaperone complex with n-{3-[(9s)-7-amino-2,2-difluoro-9-(prop-1-yn-1-yl)-6-oxa-8-azaspiro[3.5]non-7-en-9-yl]-4-fluorophenyl}-5-cyanopyridine-2-carboxamide | no | hydrolase/immune system | 2020-09-28 | 2021-03-31 | x-ray diffraction | 2.04 | 0.254 | 0.207 | 33719429 | 10.1021/acs.jmedchem.0c01858 | 0 | auth_asym_id | VH | IGHV3 | N.A. | D | N.A. | AQVQLQESGGGLVQPGGSLRLSCAASGFTFSSAIMTWVRQAPGKGREWVSTIGSDGSITTYADSVKGRFTISRDNARNTLYLQMNSLKPEDTAVYYCTSAGRRGPGTQVTVSSH | N.A. | AQVQLQESGGGLVQPGGSLRLSCAASGFTFSSAIMTWVRQAPGKGREWVSTIGSDGSITTYADSVKGRFTISRDNARNTLYLQMNSLKPEDTAVYYCTSAGRRGPGTQVTVSSH | N.A. | 13.454108 | 0 | 114 | 0 | 114 | 0 | 114 | 0 | 0 | xaperone | N.A. | homo sapiens | N.A. | A | protein | beta-secretase 2 | homo sapiens | 46 | 11 | 0.46 | H_only | train |
7d5z_D_C | 7d5z | crystal structure of ebv gh/gl bound with neutralizing antibody 1d8 | no | viral protein | 2020-09-28 | 2021-10-20 | x-ray diffraction | 4.2 | 0.277 | 0.246 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | D | C | MGWSCIILFLVATATGVHSEVQLVESGGRVVQPGGSLRLSCVTSGFTFSYYPIHWVRQGPGKGLEWVTMMSFDGTSDHCISSVKGRFVMSRDNSRNTLYLEMNKMRLEDTGVYYCARGGWKWPGGAFDVFGPGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYN... | MGWSCIILFLVATATGVHSDIVMTQTPPSLSASVGDRVTLTCRASQAIRNNLAWYQHKPGKAPKRLIYAASTLEDGVPSSFSGSGFGTDFTLTINSLQPEDFATYYCLQHSTYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGRVVQPGGSLRLSCVTSGFTFSYYPIHWVRQGPGKGLEWVTMMSFDGTSDHCISSVKGRFVMSRDNSRNTLYLEMNKMRLEDTGVYYCARGGWKWPGGAFDVFGPGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVE | DIVMTQTPPSLSASVGDRVTLTCRASQAIRNNLAWYQHKPGKAPKRLIYAASTLEDGVPSSFSGSGFGTDFTLTINSLQPEDFATYYCLQHSTYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.496916 | 22.601767 | 470 | 233 | 214 | 213 | 220 | 213 | 89 | heavy chain of 1d8 | light chain of 1d8 | homo sapiens | homo sapiens | A | protein | envelope glycoprotein h | human gammaherpesvirus 4 | 47 | 16 | 0.76 | HL | train |
7d5z_H_G | 7d5z | crystal structure of ebv gh/gl bound with neutralizing antibody 1d8 | no | viral protein | 2020-09-28 | 2021-10-20 | x-ray diffraction | 4.2 | 0.277 | 0.246 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | G | MGWSCIILFLVATATGVHSEVQLVESGGRVVQPGGSLRLSCVTSGFTFSYYPIHWVRQGPGKGLEWVTMMSFDGTSDHCISSVKGRFVMSRDNSRNTLYLEMNKMRLEDTGVYYCARGGWKWPGGAFDVFGPGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYN... | MGWSCIILFLVATATGVHSDIVMTQTPPSLSASVGDRVTLTCRASQAIRNNLAWYQHKPGKAPKRLIYAASTLEDGVPSSFSGSGFGTDFTLTINSLQPEDFATYYCLQHSTYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGRVVQPGGSLRLSCVTSGFTFSYYPIHWVRQGPGKGLEWVTMMSFDGTSDHCISSVKGRFVMSRDNSRNTLYLEMNKMRLEDTGVYYCARGGWKWPGGAFDVFGPGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVE | DIVMTQTPPSLSASVGDRVTLTCRASQAIRNNLAWYQHKPGKAPKRLIYAASTLEDGVPSSFSGSGFGTDFTLTINSLQPEDFATYYCLQHSTYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.485826 | 22.614536 | 470 | 233 | 214 | 213 | 220 | 213 | 90 | heavy chain of 1d8 | light chain of 1d8 | homo sapiens | homo sapiens | E | protein | envelope glycoprotein h | human gammaherpesvirus 4 | 48 | 18 | 0.78 | HL | train |
7d5z_L_K | 7d5z | crystal structure of ebv gh/gl bound with neutralizing antibody 1d8 | no | viral protein | 2020-09-28 | 2021-10-20 | x-ray diffraction | 4.2 | 0.277 | 0.246 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | L | K | MGWSCIILFLVATATGVHSEVQLVESGGRVVQPGGSLRLSCVTSGFTFSYYPIHWVRQGPGKGLEWVTMMSFDGTSDHCISSVKGRFVMSRDNSRNTLYLEMNKMRLEDTGVYYCARGGWKWPGGAFDVFGPGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYN... | MGWSCIILFLVATATGVHSDIVMTQTPPSLSASVGDRVTLTCRASQAIRNNLAWYQHKPGKAPKRLIYAASTLEDGVPSSFSGSGFGTDFTLTINSLQPEDFATYYCLQHSTYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGRVVQPGGSLRLSCVTSGFTFSYYPIHWVRQGPGKGLEWVTMMSFDGTSDHCISSVKGRFVMSRDNSRNTLYLEMNKMRLEDTGVYYCARGGWKWPGGAFDVFGPGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVE | DIVMTQTPPSLSASVGDRVTLTCRASQAIRNNLAWYQHKPGKAPKRLIYAASTLEDGVPSSFSGSGFGTDFTLTINSLQPEDFATYYCLQHSTYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.489552 | 22.603067 | 470 | 233 | 214 | 213 | 220 | 213 | 92 | heavy chain of 1d8 | light chain of 1d8 | homo sapiens | homo sapiens | I | protein | envelope glycoprotein h | human gammaherpesvirus 4 | 50 | 18 | 0.82 | HL | train |
7d5z_P_O | 7d5z | crystal structure of ebv gh/gl bound with neutralizing antibody 1d8 | no | viral protein | 2020-09-28 | 2021-10-20 | x-ray diffraction | 4.2 | 0.277 | 0.246 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | P | O | MGWSCIILFLVATATGVHSEVQLVESGGRVVQPGGSLRLSCVTSGFTFSYYPIHWVRQGPGKGLEWVTMMSFDGTSDHCISSVKGRFVMSRDNSRNTLYLEMNKMRLEDTGVYYCARGGWKWPGGAFDVFGPGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYN... | MGWSCIILFLVATATGVHSDIVMTQTPPSLSASVGDRVTLTCRASQAIRNNLAWYQHKPGKAPKRLIYAASTLEDGVPSSFSGSGFGTDFTLTINSLQPEDFATYYCLQHSTYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGRVVQPGGSLRLSCVTSGFTFSYYPIHWVRQGPGKGLEWVTMMSFDGTSDHCISSVKGRFVMSRDNSRNTLYLEMNKMRLEDTGVYYCARGGWKWPGGAFDVFGPGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVE | DIVMTQTPPSLSASVGDRVTLTCRASQAIRNNLAWYQHKPGKAPKRLIYAASTLEDGVPSSFSGSGFGTDFTLTINSLQPEDFATYYCLQHSTYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.499115 | 22.602203 | 470 | 233 | 214 | 213 | 220 | 213 | 90 | heavy chain of 1d8 | light chain of 1d8 | homo sapiens | homo sapiens | M | protein | envelope glycoprotein h | human gammaherpesvirus 4 | 47 | 15 | 0.75 | HL | train |
7k9z_B_A | 7k9z | crystal structure of sars-cov-2 receptor binding domain in complex with the fab fragments of neutralizing antibodies 298 and 52 | no | immune system | 2020-09-29 | 2020-10-28 | x-ray diffraction | 2.95 | 0.287 | 0.261 | 34135340 | 10.1038/s41467-021-23825-2 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV4 | B | A | QVQLVQSGAEVKKPGASVKVSCKASGGTFSTYGISWVRQAPGQGLEWMGWISPNSGGTDLAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCASDPRDDIAGGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPPTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKKPGASVKVSCKASGGTFSTYGISWVRQAPGQGLEWMGWISPNSGGTDLAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCASDPRDDIAGGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPPTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.955555 | 23.622108 | 222 | 220 | 218 | 220 | 221 | 220 | 93 | 298 fab heavy chain | 298 fab light chain | homo sapiens | homo sapiens | E | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 39 | 18 | 0.75 | HL | train |
7k9z_H_L | 7k9z | crystal structure of sars-cov-2 receptor binding domain in complex with the fab fragments of neutralizing antibodies 298 and 52 | no | immune system | 2020-09-29 | 2020-10-28 | x-ray diffraction | 2.95 | 0.287 | 0.261 | 34135340 | 10.1038/s41467-021-23825-2 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | QVQLVQSGAEVKKPGSSVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGGIIPMFGTTNYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARDRGDTIDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SDIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKAPKLLIYAASSLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQGNGFPLTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGSSVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGGIIPMFGTTNYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARDRGDTIDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | SDIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKAPKLLIYAASSLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQGNGFPLTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.351675 | 22.34734 | 220 | 215 | 212 | 212 | 217 | 212 | 92 | 52 fab heavy chain | 52 fab light chain | homo sapiens | homo sapiens | E | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 55 | 20 | 0.71 | HL | train |
7k9i_H_L | 7k9i | sars-cov-2 spike rbd in complex with neutralizing fab 2b04 (local refinement) | no | viral protein/immune system | 2020-09-29 | 2021-09-29 | electron microscopy | 3.3 | N.A. | N.A. | 34655519 | 10.1016/j.celrep.2021.109881 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV7 | H | L | QVQLKQSGPGLVAPSQSLSITCTVSGFSLINYAISWVRQPPGKGLEWLGVIWTGGGTNYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARKDYYGRYYGMDYWGQGTSVTVS | QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYNNHWVFGGGTKLTVL | QVQLKQSGPGLVAPSQSLSITCTVSGFSLINYAISWVRQPPGKGLEWLGVIWTGGGTNYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARKDYYGRYYGMDYWGQGTSVTVS | QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYNNHWVFGGGTKLTVL | 13.986775 | 13.47188 | 119 | 109 | 119 | 109 | 119 | 109 | 51 | 2b04 heavy chain | 2b04 light chain | mus musculus | mus musculus | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 32 | 17 | 0.89 | HL | train |
7k9k_H_L | 7k9k | sars-cov-2 spike rbd in complex with neutralizing fab 2h04 (local refinement) | no | viral protein/immune system | 2020-09-29 | 2021-09-29 | electron microscopy | 3.14 | N.A. | N.A. | 34655519 | 10.1016/j.celrep.2021.109881 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV6 | H | L | EVQLQQSGAELVKPGASVKMSCKASGYTFTSYWITWVKQRPGQGLEWIGDIYPGSGSTKYNEKFRSEATLTVDTSSTTAYMQLSSLTSEDSAVYYCARWDFYGSRTFDYWGQGTTLTVSSA | DIVLTQSPAILSVSPGERVSFSCRASQNIGTIIHWYQQRTNGSPRLLIKYASESVSGIPSRFSGSGSGTDFTLSINSVESEDIADYYCQQSSSWPLTFGAGTKLEL | EVQLQQSGAELVKPGASVKMSCKASGYTFTSYWITWVKQRPGQGLEWIGDIYPGSGSTKYNEKFRSEATLTVDTSSTTAYMQLSSLTSEDSAVYYCARWDFYGSRTFDYWGQGTTLTVSSA | DIVLTQSPAILSVSPGERVSFSCRASQNIGTIIHWYQQRTNGSPRLLIKYASESVSGIPSRFSGSGSGTDFTLSINSVESEDIADYYCQQSSSWPLTFGAGTKLEL | 14.029717 | 13.280012 | 121 | 106 | 121 | 106 | 121 | 106 | 44 | 2h04 heavy chain | 2h04 light chain | mus musculus | mus musculus | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 34 | 18 | 0.9 | HL | train |
7akd_H_L | 7akd | structure of the sars-cov-2 spike glycoprotein in complex with the 47d11 neutralizing antibody fab fragment | no | viral protein | 2020-09-30 | 2021-05-19 | electron microscopy | 4 | N.A. | N.A. | 33958322 | 10.1126/sciadv.abf5632 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV3 | H | L | QVQLQESGPGLVKPSETLSLTCSVSGGSISSHYWSWIRQPPGKGLEWIGYIYYSGSTNHNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGVLLWFGEPIFEIWGQGTMVTVSS | EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRLLIYGASTRAPGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGGGTKVEI | QVQLQESGPGLVKPSETLSLTCSVSGGSISSHYWSWIRQPPGKGLEWIGYIYYSGSTNHNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGVLLWFGEPIFEIWGQGTMVTVS | EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRLLIYGASTRAPGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGGGTKVEI | 14.180083 | 13.412954 | 121 | 106 | 120 | 106 | 120 | 106 | 36 | 47d11 neutralizing antibody heavy chain | 47d11 neutralizing antibody light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 36 | 14 | 0.88 | HL | train |
7akd_D_E | 7akd | structure of the sars-cov-2 spike glycoprotein in complex with the 47d11 neutralizing antibody fab fragment | no | viral protein | 2020-09-30 | 2021-05-19 | electron microscopy | 4 | N.A. | N.A. | 33958322 | 10.1126/sciadv.abf5632 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV3 | D | E | QVQLQESGPGLVKPSETLSLTCSVSGGSISSHYWSWIRQPPGKGLEWIGYIYYSGSTNHNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGVLLWFGEPIFEIWGQGTMVTVSS | EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRLLIYGASTRAPGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGGGTKVEI | QVQLQESGPGLVKPSETLSLTCSVSGGSISSHYWSWIRQPPGKGLEWIGYIYYSGSTNHNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGVLLWFGEPIFEIWGQGTMVTVS | EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRLLIYGASTRAPGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGGGTKVEI | 14.179142 | 13.412966 | 121 | 106 | 120 | 106 | 120 | 106 | 32 | 47d11 neutralizing antibody heavy chain | 47d11 neutralizing antibody light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 34 | 15 | 0.88 | HL | train |
7d6i_B_C | 7d6i | a neutralizing mab targeting receptor-binding-domain of sars-cov-2 | no | antiviral protein,immune system | 2020-09-30 | 2021-10-13 | x-ray diffraction | 3.41 | 0.255 | 0.226 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV6 | B | C | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCTRAGWVRGAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTHHHHHHHH | NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSNLWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCTRAGWVRGAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSNLWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE | 23.791609 | 21.216612 | 235 | 217 | 212 | 215 | 219 | 215 | 85 | heavy chain of gh12-fab | light chain of gh12-fab | homo sapiens | homo sapiens | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 40 | 14 | 0.74 | HL | train |
7akj_H_L | 7akj | structure of the sars-cov spike glycoprotein in complex with the 47d11 neutralizing antibody fab fragment | no | viral protein | 2020-10-01 | 2021-05-19 | electron microscopy | 3.8 | N.A. | N.A. | 33958322 | 10.1126/sciadv.abf5632 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV3 | H | L | QVQLQESGPGLVKPSETLSLTCSVSGGSISSHYWSWIRQPPGKGLEWIGYIYYSGSTNHNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGVLLWFGEPIFEIWGQGTMVTVSS | EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRLLIYGASTRAPGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGGGTKVEI | QVQLQESGPGLVKPSETLSLTCSVSGGSISSHYWSWIRQPPGKGLEWIGYIYYSGSTNHNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGVLLWFGEPIFEIWGQGTMVTVS | EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRLLIYGASTRAPGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGGGTKVEI | 14.243056 | 13.52505 | 121 | 106 | 120 | 106 | 120 | 106 | 41 | 47d11 neutralizing antibody heavy chain | 47d11 neutralizing antibody light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein | sars coronavirus wh20 | 35 | 13 | 0.81 | HL | train |
7akj_E_D | 7akj | structure of the sars-cov spike glycoprotein in complex with the 47d11 neutralizing antibody fab fragment | no | viral protein | 2020-10-01 | 2021-05-19 | electron microscopy | 3.8 | N.A. | N.A. | 33958322 | 10.1126/sciadv.abf5632 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV3 | E | D | QVQLQESGPGLVKPSETLSLTCSVSGGSISSHYWSWIRQPPGKGLEWIGYIYYSGSTNHNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGVLLWFGEPIFEIWGQGTMVTVSS | EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRLLIYGASTRAPGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGGGTKVEI | QVQLQESGPGLVKPSETLSLTCSVSGGSISSHYWSWIRQPPGKGLEWIGYIYYSGSTNHNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGVLLWFGEPIFEIWGQGTMVTVS | EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRLLIYGASTRAPGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGGGTKVEI | 14.242649 | 13.525041 | 121 | 106 | 120 | 106 | 120 | 106 | 41 | 47d11 neutralizing antibody heavy chain | 47d11 neutralizing antibody light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein | sars coronavirus wh20 | 36 | 14 | 0.82 | HL | train |
7akj_G_F | 7akj | structure of the sars-cov spike glycoprotein in complex with the 47d11 neutralizing antibody fab fragment | no | viral protein | 2020-10-01 | 2021-05-19 | electron microscopy | 3.8 | N.A. | N.A. | 33958322 | 10.1126/sciadv.abf5632 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV3 | G | F | QVQLQESGPGLVKPSETLSLTCSVSGGSISSHYWSWIRQPPGKGLEWIGYIYYSGSTNHNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGVLLWFGEPIFEIWGQGTMVTVSS | EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRLLIYGASTRAPGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGGGTKVEI | QVQLQESGPGLVKPSETLSLTCSVSGGSISSHYWSWIRQPPGKGLEWIGYIYYSGSTNHNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGVLLWFGEPIFEIWGQGTMVTVS | EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRLLIYGASTRAPGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGGGTKVEI | 14.242871 | 13.525059 | 121 | 106 | 120 | 106 | 120 | 106 | 41 | 47d11 neutralizing antibody heavy chain | 47d11 neutralizing antibody light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein | sars coronavirus wh20 | 36 | 14 | 0.82 | HL | train |
7kbb_A_B | 7kbb | cryo-em structure of the hcmv pentamer bound by fabs 2-18 and 8i21 | no | viral protein/immune system | 2020-10-01 | 2021-08-11 | electron microscopy | 4.02 | N.A. | N.A. | 35275718 | 10.1126/sciadv.abm2546 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | A | B | EVQLVQSGGGLVQPGGSLRVSCAASGFSFSDHDMDWVRQAPGKGFEWVGRSRNKDYSSTTEYAASVRGRFTISRHTSEDLLYLELNTVKTEDTAVYFCARGPHHSDRSGYYGGTFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ | DIQMTQSPSSVSASVGDRVIITCRASQGISSWLAWYQQKPGRAPRLLIYDASTLESGVPSRFSGRGSGTEFTLTINSLQPEDFATYYCQQGNMFPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGGGLVQPGGSLRVSCAASGFSFSDHDMDWVRQAPGKGFEWVGRSRNKDYSSTTEYAASVRGRFTISRHTSEDLLYLELNTVKTEDTAVYFCARGPHHSDRSGYYGGTFDIWGQGTMVTVSS | DIQMTQSPSSVSASVGDRVIITCRASQGISSWLAWYQQKPGRAPRLLIYDASTLESGVPSRFSGRGSGTEFTLTINSLQPEDFATYYCQQGNMFPLTFGGGTKVEIK | 14.067465 | 13.153047 | 240 | 214 | 127 | 107 | 127 | 107 | 46 | 2-18 fab heavy chain | 2-18 fab light chain | homo sapiens | homo sapiens | C;E | protein;protein | envelope protein ul128;ul131a | human cytomegalovirus;human cytomegalovirus | 20;32 | 10;15 | 0.91;0.88 | HL | train |
7kbb_H_L | 7kbb | cryo-em structure of the hcmv pentamer bound by fabs 2-18 and 8i21 | no | viral protein/immune system | 2020-10-01 | 2021-08-11 | electron microscopy | 4.02 | N.A. | N.A. | 35275718 | 10.1126/sciadv.abm2546 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | H | L | LVELVESGGGVVQPGRSLRLSCAASGFTFSSDGMHWVRQSPGRGLEWVAFISSDGSTPYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAMYFCAKDWALFRWLRTFDHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ | ETVMTQSPATLSVSPGGRATLSCRASQSVGINLAWYQQKPGQAPRLLIYGASTRASGFPARFSGSGSGTEFTLTITSLQSEDFAVYYCQQYNDWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | LVELVESGGGVVQPGRSLRLSCAASGFTFSSDGMHWVRQSPGRGLEWVAFISSDGSTPYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAMYFCAKDWALFRWLRTFDHWGQGTLVTVSS | ETVMTQSPATLSVSPGGRATLSCRASQSVGINLAWYQQKPGQAPRLLIYGASTRASGFPARFSGSGSGTEFTLTITSLQSEDFAVYYCQQYNDWPPWTFGQGTKVEIK | 14.061214 | 13.219999 | 234 | 215 | 122 | 108 | 122 | 108 | 44 | 8i21 fab heavy chain | 8i21 fab light chain | homo sapiens | homo sapiens | D | protein | envelope glycoprotein ul130 | human cytomegalovirus | 75 | 22 | 0.55 | HL | train |
7kbt_E_F | 7kbt | factor viii in complex with the anti-c2 domain antibody, g99 | no | blood clotting/immune system | 2020-10-02 | 2020-11-18 | x-ray diffraction | 4.15 | 0.338 | 0.3 | N.A. | 10.3389/fimmu.2021.697602 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | E | F | QVQLQQSGAELMKPGASVKISCKATGYTFSSYWIEWVKQRPGHGLEWIGEILPGSGSTNYNERFKGKASFTADSSSNTAYMQLSSLTSEDSAVYYCTRTSYYFGSSYDFDVWGAGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGP | DIQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSSVPKRFSGSRSGSDYSLTISSLDSEDFAVYYCLQYASYPYTFGGGTKVEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | QVQLQQSGAELMKPGASVKISCKATGYTFSSYWIEWVKQRPGHGLEWIGEILPGSGSTNYNERFKGKASFTADSSSNTAYMQLSSLTSEDSAVYYCTRTSYYFGSSYDFDVWGAGTTVTVSSA | MTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSSVPKRFSGSRSGSDYSLTISSLDSEDFAVYYCLQYASYPYTFGGGTKVEI | 14.537435 | 13.303337 | 224 | 214 | 115 | 96 | 123 | 103 | 38 | g99 heavy chain | g99 light chain | mus musculus | mus musculus | A | protein | coagulation factor viii,coagulation factor viii,coagulation factor viii,coagulation factor viii,coagulation factor viii | sus scrofa | 52 | 26 | 0.9 | HL | train |
7kbm_A | 7kbm | reverse transcriptase diabody with r83c mutation crystallized in c2 | no | protein binding | 2020-10-02 | 2021-03-10 | x-ray diffraction | 2 | 0.257 | 0.209 | 33636101 | 10.1016/j.str.2021.02.001 | 0 | auth_asym_id | VHVL | N.A. | N.A. | A | N.A. | MEVQLVESGGGLVQPGGSLRLSCAASGFSLSTSGIGVTWVRQAPGKGLEWLATIWWDDDNRYADSVKGRFTISADTSKNTAYLQMNSLCAEDTAVYYCAQSAITSVTDSAMDHWGQGTLVTVSSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDISSYLNWYQQKPGKAPKLLIYYTSSLHSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYSKFPWTFGQGTKVEIKGSHHHHHH | N.A. | VQLVESGGGLVQPGGSLRLSCAASGFSLSTSGIGVTWVRQAPGKGLEWLATIWWDDDNRYADSVKGRFTISADTSKNTAYLQMNSLCAEDTAVYYCAQSAITSVTDSAMDHWGQGTLVTVSSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDISSYLNWYQQKPGKAPKLLIYYTSSLHSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYSKFPWTFGQGTKVEIK | N.A. | 26.332943 | 0 | 244 | 0 | 230 | 0 | 234 | 0 | 0 | single-chain scfv | N.A. | homo sapiens | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7kbp_A | 7kbp | herceptin diabody with r83t, e85c mutations | no | protein binding | 2020-10-02 | 2021-03-10 | x-ray diffraction | 2.3 | 0.232 | 0.183 | 33636101 | 10.1016/j.str.2021.02.001 | 0 | auth_asym_id | VHVL | N.A. | N.A. | A | N.A. | MEVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLTACDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKGSHHHHHH | N.A. | MEVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLTACDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKGSHH | N.A. | 27.083122 | 0 | 241 | 0 | 233 | 0 | 237 | 0 | 0 | single-chain fv | N.A. | homo sapiens | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7kbp_B | 7kbp | herceptin diabody with r83t, e85c mutations | no | protein binding | 2020-10-02 | 2021-03-10 | x-ray diffraction | 2.3 | 0.232 | 0.183 | 33636101 | 10.1016/j.str.2021.02.001 | 0 | auth_asym_id | VHVL | N.A. | N.A. | B | N.A. | MEVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLTACDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKGSHHHHHH | N.A. | MEVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLTACDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKGSHH | N.A. | 26.511183 | 0 | 241 | 0 | 235 | 0 | 237 | 0 | 0 | single-chain fv | N.A. | homo sapiens | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7kbp_C | 7kbp | herceptin diabody with r83t, e85c mutations | no | protein binding | 2020-10-02 | 2021-03-10 | x-ray diffraction | 2.3 | 0.232 | 0.183 | 33636101 | 10.1016/j.str.2021.02.001 | 0 | auth_asym_id | VHVL | N.A. | N.A. | C | N.A. | MEVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLTACDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKGSHHHHHH | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLTACDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIK | N.A. | 26.684948 | 0 | 241 | 0 | 230 | 0 | 232 | 0 | 0 | single-chain fv | N.A. | homo sapiens | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7kbp_D | 7kbp | herceptin diabody with r83t, e85c mutations | no | protein binding | 2020-10-02 | 2021-03-10 | x-ray diffraction | 2.3 | 0.232 | 0.183 | 33636101 | 10.1016/j.str.2021.02.001 | 0 | auth_asym_id | VHVL | N.A. | N.A. | D | N.A. | MEVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLTACDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKGSHHHHHH | N.A. | MEVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLTACDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKGSHH | N.A. | 26.72578 | 0 | 241 | 0 | 233 | 0 | 237 | 0 | 0 | single-chain fv | N.A. | homo sapiens | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7kbk_C | 7kbk | ricin bound to vhh antibody v6e11 | no | toxin | 2020-10-02 | 2021-08-04 | x-ray diffraction | 2.09 | 0.203 | 0.172 | 34089718 | 10.1016/j.jmb.2021.167086 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | QLQLAESGGGLVQAGGSLNLSCIASRRTLSTSFMAWFRQVPGKEREFVAALRSSDGRPYYGDSVKGRFTVSRDNANTVYLQMNSLKPEDTAIYYCALNRGYSGTGYPSKQYEYNDWGQGTQVTVSSEPKTPKPQ | N.A. | LQLAESGGGLVQAGGSLNLSCIASRRTLSTSFMAWFRQVPGKEREFVAALRSSDGRPYYGDSVKGRFTVSRDNANTVYLQMNSLKPEDTAIYYCALNRGYSGTGYPSKQYEYNDWGQGTQVTVSS | N.A. | 13.743097 | 0 | 134 | 0 | 124 | 0 | 125 | 0 | 0 | vhh antibody v6e11 | N.A. | vicugna pacos | N.A. | A;B | protein;protein | ricin;ricin | ricinus communis;ricinus communis | 22;10 | 10;5 | 0.91;0.83 | H_only | train |
7d77_S | 7d77 | cryo-em structure of the cortisol-bound adhesion receptor gpr97-go complex | no | membrane protein | 2020-10-03 | 2021-02-03 | electron microscopy | 2.9 | N.A. | N.A. | 33408414 | 10.1038/s41586-020-03083-w | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKGS | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.422014 | 0 | 250 | 0 | 231 | 0 | 246 | 0 | 0 | scfv16 | N.A. | synthetic construct | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(o) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 32;24 | 20;10 | 0.91;0.83 | H_only | train |
7kc1_H_L | 7kc1 | cryo-em structure of srr2899884.46167h+medi8852l fab in complex with victoria ha | no | immune system | 2020-10-04 | 2021-05-12 | electron microscopy | 3.41 | N.A. | N.A. | 34135892 | 10.3389/fimmu.2021.662909 | 0 | auth_asym_id | VH:VL | IGHV6 | IGKV1 | H | L | QIQLQQSGPGLVKPSQTLSLTCSISGDTVTNNYAAWDWIRQSPTRGLEWLGRTFYRSKWYKEYALSVKSRLTISPDTSKNQISLQLSSVTPEDTAVYYCARAGITIFGLITGGLDYWGQGSLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | MTQSPSSLSASVGDRVTITCRTSQSLSSYTHWYQQKPGKAPKLLIYAASSRGSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | QIQLQQSGPGLVKPSQTLSLTCSISGDTVTNNYAAWDWIRQSPTRGLEWLGRTFYRSKWYKEYALSVKSRLTISPDTSKNQISLQLSSVTPEDTAVYYCARAGITIFGLITGGLDYWGQGSLVTV | MTQSPSSLSASVGDRVTITCRTSQSLSSYTHWYQQKPGKAPKLLIYAASSRGSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRTFGQGTKVEI | 14.406533 | 12.579999 | 227 | 206 | 125 | 99 | 125 | 99 | 35 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | A;B | protein;protein | hemagglutinin;fusion protein of hemagglutinin and envelope glycoprotein | influenza a virus;influenza a virus | 13;41 | 6;17 | 1.0;0.89 | HL | train |
7kc1_E_F | 7kc1 | cryo-em structure of srr2899884.46167h+medi8852l fab in complex with victoria ha | no | immune system | 2020-10-04 | 2021-05-12 | electron microscopy | 3.41 | N.A. | N.A. | 34135892 | 10.3389/fimmu.2021.662909 | 0 | auth_asym_id | VH:VL | IGHV6 | IGKV1 | E | F | QIQLQQSGPGLVKPSQTLSLTCSISGDTVTNNYAAWDWIRQSPTRGLEWLGRTFYRSKWYKEYALSVKSRLTISPDTSKNQISLQLSSVTPEDTAVYYCARAGITIFGLITGGLDYWGQGSLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | MTQSPSSLSASVGDRVTITCRTSQSLSSYTHWYQQKPGKAPKLLIYAASSRGSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | QIQLQQSGPGLVKPSQTLSLTCSISGDTVTNNYAAWDWIRQSPTRGLEWLGRTFYRSKWYKEYALSVKSRLTISPDTSKNQISLQLSSVTPEDTAVYYCARAGITIFGLITGGLDYWGQGSLVTV | MTQSPSSLSASVGDRVTITCRTSQSLSSYTHWYQQKPGKAPKLLIYAASSRGSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRTFGQGTKVEI | 14.399896 | 12.581264 | 227 | 206 | 125 | 99 | 125 | 99 | 35 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | C;D | protein;protein | hemagglutinin;fusion protein of hemagglutinin and envelope glycoprotein | influenza a virus;influenza a virus | 12;43 | 6;18 | 1.0;0.9 | HL | train |
7kc1_J_K | 7kc1 | cryo-em structure of srr2899884.46167h+medi8852l fab in complex with victoria ha | no | immune system | 2020-10-04 | 2021-05-12 | electron microscopy | 3.41 | N.A. | N.A. | 34135892 | 10.3389/fimmu.2021.662909 | 0 | auth_asym_id | VH:VL | IGHV6 | IGKV1 | J | K | QIQLQQSGPGLVKPSQTLSLTCSISGDTVTNNYAAWDWIRQSPTRGLEWLGRTFYRSKWYKEYALSVKSRLTISPDTSKNQISLQLSSVTPEDTAVYYCARAGITIFGLITGGLDYWGQGSLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | MTQSPSSLSASVGDRVTITCRTSQSLSSYTHWYQQKPGKAPKLLIYAASSRGSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | QIQLQQSGPGLVKPSQTLSLTCSISGDTVTNNYAAWDWIRQSPTRGLEWLGRTFYRSKWYKEYALSVKSRLTISPDTSKNQISLQLSSVTPEDTAVYYCARAGITIFGLITGGLDYWGQGSLVTV | MTQSPSSLSASVGDRVTITCRTSQSLSSYTHWYQQKPGKAPKLLIYAASSRGSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRTFGQGTKVEI | 14.402849 | 12.582535 | 227 | 206 | 125 | 99 | 125 | 99 | 36 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | G;I | protein;protein | hemagglutinin;fusion protein of hemagglutinin and envelope glycoprotein | influenza a virus;influenza a virus | 12;43 | 6;18 | 1.0;0.9 | HL | train |
7d7m_E | 7d7m | cryo-em structure of the prostaglandin e receptor ep4 coupled to g protein | yes | membrane protein | 2020-10-05 | 2020-11-18 | electron microscopy | 3.3 | N.A. | N.A. | 33264604 | 10.1016/j.str.2020.11.007 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSENLYFQ | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.824872 | 0 | 134 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody nb35 | N.A. | lama glama | N.A. | B;D | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(s) subunit alpha isoforms short,guanine nucleotide-binding protein g(s) subunit alpha isoforms short,guanine nucleotide-binding protein g(s) subunit alpha isoforms short | homo sapiens;homo sapiens | 33;49 | 11;14 | 0.65;0.58 | H_only | train |
7kcr_H_L | 7kcr | cryo-em structure of zika virus in complex with e protein cross-linking human monoclonal antibody adi30056 | no | virus/immune system | 2020-10-07 | 2020-12-16 | electron microscopy | 4 | N.A. | N.A. | 33255202 | 10.3390/v12121346 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EVQLLESGGGVVQPGGSLRLSCTASGFTFRNFGIHWVRQAPGKRLEWVAFIRYDGRNKYYADSVKGRFISSRDNSKNMVYLDMKSLRPEDTAIYHCAADGEETSPGSFDYWGQGTLVTVSS | DIVMTQTPSSLAASVGDSVTITCRASESVSTVLNWYQHKPGKAPKLLIYAASTLPSGVPSRFSGSGSGTDFTLSISSLQPEDFAIYYCQQSYFSPRTFGGGTKVEIK | EVQLLESGGGVVQPGGSLRLSCTASGFTFRNFGIHWVRQAPGKRLEWVAFIRYDGRNKYYADSVKGRFISSRDNSKNMVYLDMKSLRPEDTAIYHCAADGEETSPGSFDYWGQGTLVTVSS | DIVMTQTPSSLAASVGDSVTITCRASESVSTVLNWYQHKPGKAPKLLIYAASTLPSGVPSRFSGSGSGTDFTLSISSLQPEDFAIYYCQQSYFSPRTFGGGTKVEIK | 13.863608 | 13.175722 | 121 | 107 | 121 | 107 | 121 | 107 | 48 | adi30056 fab heavy chain variable region | adi30056 fab light chain variable region | homo sapiens | homo sapiens | C | protein | envelope protein e | zika virus zikv/h. sapiens/frenchpolynesia/10087pf/2013 | 48 | 19 | 0.86 | HL | train |
7d85_B_C | 7d85 | crystal structure of anti-erbb3 fab isu104 in complex with human erbb3 extracellular domain 3 | no | immune system | 2020-10-07 | 2021-04-07 | x-ray diffraction | 2.5 | 0.258 | 0.203 | 33782100 | 10.1158/1535-7163.MCT-20-0907 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV1 | B | C | EVQLLESGGGLVQPGGSLRLSCAASGFTFSDYDMSWVRQAPGKGLEWVSTIDLDSGSIYYADSVQGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDLHMGPEGPFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNSVSWYQQLPGTAPKLLIYSDNHRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCQGWDTSLSGHVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSDYDMSWVRQAPGKGLEWVSTIDLDSGSIYYADSVQGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDLHMGPEGPFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | SVLTQPPSASGTPGQRVTISCSGSSSNIGSNSVSWYQQLPGTAPKLLIYSDNHRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCQGWDTSLSGHVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTE | 21.294014 | 23.164669 | 228 | 216 | 218 | 213 | 222 | 213 | 92 | anti-erbb3 fab heavy chain | anti-erbb3 fab light chain | homo sapiens | homo sapiens | A | protein | receptor tyrosine-protein kinase erbb-3 | homo sapiens | 47 | 18 | 0.78 | HL | train |
7d85_E_F | 7d85 | crystal structure of anti-erbb3 fab isu104 in complex with human erbb3 extracellular domain 3 | no | immune system | 2020-10-07 | 2021-04-07 | x-ray diffraction | 2.5 | 0.258 | 0.203 | 33782100 | 10.1158/1535-7163.MCT-20-0907 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV1 | E | F | EVQLLESGGGLVQPGGSLRLSCAASGFTFSDYDMSWVRQAPGKGLEWVSTIDLDSGSIYYADSVQGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDLHMGPEGPFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNSVSWYQQLPGTAPKLLIYSDNHRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCQGWDTSLSGHVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS | EVQLLESGGGLVQPGGSLRLSCAASGFTFSDYDMSWVRQAPGKGLEWVSTIDLDSGSIYYADSVQGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDLHMGPEGPFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | SVLTQPPSASGTPGQRVTISCSGSSSNIGSNSVSWYQQLPGTAPKLLIYSDNHRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCQGWDTSLSGHVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTE | 21.252485 | 22.965948 | 228 | 216 | 217 | 213 | 222 | 213 | 95 | anti-erbb3 fab heavy chain | anti-erbb3 fab light chain | homo sapiens | homo sapiens | D | protein | receptor tyrosine-protein kinase erbb-3 | homo sapiens | 52 | 19 | 0.7 | HL | train |
7kd0_C | 7kd0 | ricin bound to vhh antibody v2c11 | no | toxin | 2020-10-07 | 2021-08-04 | x-ray diffraction | 2.77 | 0.255 | 0.207 | 34089718 | 10.1016/j.jmb.2021.167086 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | AQVQLVESGGGLVQPGGSLRLSCVASGFTFSSTPMNWFRQAPGKEREFVAGVGSRNDIAYYADSVKGRFTVSRDDAKNTVYLQMNSLKPEDTGVYYCKRPAGRIEDELWGQGTQVTVSSEPKTPKPQ | N.A. | AQVQLVESGGGLVQPGGSLRLSCVASGFTFSSTPMNWFRQAPGKEREFVAGVGSRNDIAYYADSVKGRFTVSRDDAKNTVYLQMNSLKPEDTGVYYCKRPAGRIEDELWGQGTQVTV | N.A. | 13.622279 | 0 | 127 | 0 | 117 | 0 | 117 | 0 | 0 | anti-ron nanobody | N.A. | lama glama | N.A. | B | protein | ricin chain b | ricinus communis | 41 | 11 | 0.5 | H_only | train |
7kd2_C | 7kd2 | ricin bound to vhh antibody v11b2 | no | toxin | 2020-10-07 | 2021-08-04 | x-ray diffraction | 2.55 | 0.28 | 0.227 | 34089718 | 10.1016/j.jmb.2021.167086 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | QVQLVETGGGLVQPGGSLKLSCAASGSISSPNVMGWYRQAPGKQRELVATMTSGGNTYSEDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNARDMWDRSHEYWGQGTQVTVSSEPKTPKPQ | N.A. | QVQLVETGGGLVQPGGSLKLSCAASGSISSPNVMGWYRQAPGKQRELVATMTSGGNTYSEDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNARDMWDRSHEYWGQGTQVTV | N.A. | 13.729614 | 0 | 126 | 0 | 115 | 0 | 116 | 0 | 0 | vhh antibody v11b2 | N.A. | vicugna pacos | N.A. | A;B | protein;protein | ricin chain a;ricin chain b | ricinus communis;ricinus communis | 12;40 | 6;11 | 1.0;0.55 | H_only | train |
7d8b_B | 7d8b | engineering disulphide-free autonomous antibody vh domains to modulate intracellular pathways | no | rna binding protein | 2020-10-07 | 2021-08-25 | x-ray diffraction | 2.46 | 0.292 | 0.25 | 35982046 | 10.1038/s41467-022-32463-1 | 0 | auth_asym_id | VH | IGHV3 | N.A. | B | N.A. | MSEVQLVESGGGLVQPGGSLRLSSAISGFSISSTSIDWVRQAPGKGLEWVARISPSSGSTSYADSVKGRFTISADTSKNTVYLQMNSLRAEDTAVYYTGRVAKALNSRSPSFVVNTYSSIGFDYRGQGTLVTVSSGAAEQKLISEEDLNGAAAFEHHHHHH | N.A. | SEVQLVESGGGLVQPGGSLRLSSAISGFSISSTSIDWVRQAPGKGLEWVARISPSSGSTSYADSVKGRFTISADTSKNTVYLQMNSLRAEDTAVYYTGRVAKALNSRSPSFVVNTYSSIGFDYRGQGTLVTVS | N.A. | 13.833289 | 0 | 161 | 0 | 133 | 0 | 133 | 0 | 0 | vh-s4 | N.A. | homo sapiens | N.A. | A | protein | eukaryotic translation initiation factor 4e | homo sapiens | 37 | 12 | 0.6 | H_only | train |
7d8b_D | 7d8b | engineering disulphide-free autonomous antibody vh domains to modulate intracellular pathways | no | rna binding protein | 2020-10-07 | 2021-08-25 | x-ray diffraction | 2.46 | 0.292 | 0.25 | 35982046 | 10.1038/s41467-022-32463-1 | 0 | auth_asym_id | VH | IGHV3 | N.A. | D | N.A. | MSEVQLVESGGGLVQPGGSLRLSSAISGFSISSTSIDWVRQAPGKGLEWVARISPSSGSTSYADSVKGRFTISADTSKNTVYLQMNSLRAEDTAVYYTGRVAKALNSRSPSFVVNTYSSIGFDYRGQGTLVTVSSGAAEQKLISEEDLNGAAAFEHHHHHH | N.A. | SEVQLVESGGGLVQPGGSLRLSSAISGFSISSTSIDWVRQAPGKGLEWVARISPSSGSTSYADSVKGRFTISADTSKNTVYLQMNSLRAEDTAVYYTGRVAKALNSRSPSFVVNTYSSIGFDYRGQGTLVTVS | N.A. | 13.833699 | 0 | 161 | 0 | 133 | 0 | 133 | 0 | 0 | vh-s4 | N.A. | homo sapiens | N.A. | C | protein | eukaryotic translation initiation factor 4e | homo sapiens | 37 | 14 | 0.67 | H_only | train |
7kde_S_T | 7kde | bg505 sosip.664 in complex with the v3-targeting rhesus macaque antibody 1485 and human gp120-gp41 interface antibody 8anc195 | yes | viral protein/immune system | 2020-10-08 | 2020-10-28 | electron microscopy | 3.55 | N.A. | N.A. | 33084569 | 10.7554/eLife.61991 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | S | T | QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISVSA | DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEV | 15.025875 | 13.341887 | 244 | 215 | 132 | 107 | 132 | 107 | 48 | 8anc195 fab heavy chain | 8anc195 fab light chain | homo sapiens | homo sapiens | A;E | protein;protein | hiv-1 envelope glycoprotein bg505 sosip.664 gp41;envelope glycoprotein gp120 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 26;37 | 11;11 | 0.92;0.65 | HL | train |
7kde_O_P | 7kde | bg505 sosip.664 in complex with the v3-targeting rhesus macaque antibody 1485 and human gp120-gp41 interface antibody 8anc195 | yes | viral protein/immune system | 2020-10-08 | 2020-10-28 | electron microscopy | 3.55 | N.A. | N.A. | 33084569 | 10.7554/eLife.61991 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | O | P | QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISVSA | DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEV | 15.035997 | 13.346988 | 244 | 215 | 132 | 107 | 132 | 107 | 50 | 8anc195 fab heavy chain | 8anc195 fab light chain | homo sapiens | homo sapiens | B;G | protein;protein | hiv-1 envelope glycoprotein bg505 sosip.664 gp41;envelope glycoprotein gp120 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 24;36 | 12;11 | 1.0;0.65 | HL | train |
7kde_Q_R | 7kde | bg505 sosip.664 in complex with the v3-targeting rhesus macaque antibody 1485 and human gp120-gp41 interface antibody 8anc195 | yes | viral protein/immune system | 2020-10-08 | 2020-10-28 | electron microscopy | 3.55 | N.A. | N.A. | 33084569 | 10.7554/eLife.61991 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | Q | R | QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISVSA | DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEV | 15.0362 | 13.326348 | 244 | 215 | 132 | 107 | 132 | 107 | 49 | 8anc195 fab heavy chain | 8anc195 fab light chain | homo sapiens | homo sapiens | C;F | protein;protein | hiv-1 envelope glycoprotein bg505 sosip.664 gp41;envelope glycoprotein gp120 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 23;35 | 10;10 | 0.91;0.62 | HL | train |
7kde_M_N | 7kde | bg505 sosip.664 in complex with the v3-targeting rhesus macaque antibody 1485 and human gp120-gp41 interface antibody 8anc195 | yes | viral protein/immune system | 2020-10-08 | 2020-10-28 | electron microscopy | 3.55 | N.A. | N.A. | 33084569 | 10.7554/eLife.61991 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV1 | M | N | EVQLVESGPGLVKASETLSLTCTVSGYNIRSNNWWSWVRQPPGKGLEWIGGVYANSEITNYNSSLKSRVSISQDAWRNKFSLKLKSVTDADTAVYYCVRGPNHWEYFDSGNNEYFEFWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | QSALTQPPSVSGAPGQRVTISCTGTSSNIENYHAFWYQQFSGMAPKLLIRDNDKRPSGVSDRFSGSKSGASASLTITGLQTDDEADYYCQSYDSGLRSYIFASGTRLTVLGQPKASPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGPGLVKASETLSLTCTVSGYNIRSNNWWSWVRQPPGKGLEWIGGVYANSEITNYNSSLKSRVSISQDAWRNKFSLKLKSVTDADTAVYYCVRGPNHWEYFDSGNNEYFEFWGQGALVTVSSA | SALTQPPSVSGAPGQRVTISCTGTSSNIENYHAFWYQQFSGMAPKLLIRDNDKRPSGVSDRFSGSKSGASASLTITGLQTDDEADYYCQSYDSGLRSYIFASGTRLTV | 14.761641 | 13.420788 | 233 | 216 | 129 | 103 | 129 | 108 | 37 | ab 1485 heavy chain | ab 1485 light chain | homo sapiens | homo sapiens | E | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 17 | 8 | 0.89 | HL | train |
7kde_J_I | 7kde | bg505 sosip.664 in complex with the v3-targeting rhesus macaque antibody 1485 and human gp120-gp41 interface antibody 8anc195 | yes | viral protein/immune system | 2020-10-08 | 2020-10-28 | electron microscopy | 3.55 | N.A. | N.A. | 33084569 | 10.7554/eLife.61991 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV1 | J | I | EVQLVESGPGLVKASETLSLTCTVSGYNIRSNNWWSWVRQPPGKGLEWIGGVYANSEITNYNSSLKSRVSISQDAWRNKFSLKLKSVTDADTAVYYCVRGPNHWEYFDSGNNEYFEFWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | QSALTQPPSVSGAPGQRVTISCTGTSSNIENYHAFWYQQFSGMAPKLLIRDNDKRPSGVSDRFSGSKSGASASLTITGLQTDDEADYYCQSYDSGLRSYIFASGTRLTVLGQPKASPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGPGLVKASETLSLTCTVSGYNIRSNNWWSWVRQPPGKGLEWIGGVYANSEITNYNSSLKSRVSISQDAWRNKFSLKLKSVTDADTAVYYCVRGPNHWEYFDSGNNEYFEFWGQGALVTVSSA | SALTQPPSVSGAPGQRVTISCTGTSSNIENYHAFWYQQFSGMAPKLLIRDNDKRPSGVSDRFSGSKSGASASLTITGLQTDDEADYYCQSYDSGLRSYIFASGTRLTV | 14.712434 | 13.400695 | 233 | 216 | 129 | 103 | 129 | 108 | 38 | ab 1485 heavy chain | ab 1485 light chain | homo sapiens | homo sapiens | F | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 20 | 8 | 0.89 | HL | train |
7kde_H_L | 7kde | bg505 sosip.664 in complex with the v3-targeting rhesus macaque antibody 1485 and human gp120-gp41 interface antibody 8anc195 | yes | viral protein/immune system | 2020-10-08 | 2020-10-28 | electron microscopy | 3.55 | N.A. | N.A. | 33084569 | 10.7554/eLife.61991 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV1 | H | L | EVQLVESGPGLVKASETLSLTCTVSGYNIRSNNWWSWVRQPPGKGLEWIGGVYANSEITNYNSSLKSRVSISQDAWRNKFSLKLKSVTDADTAVYYCVRGPNHWEYFDSGNNEYFEFWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | QSALTQPPSVSGAPGQRVTISCTGTSSNIENYHAFWYQQFSGMAPKLLIRDNDKRPSGVSDRFSGSKSGASASLTITGLQTDDEADYYCQSYDSGLRSYIFASGTRLTVLGQPKASPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGPGLVKASETLSLTCTVSGYNIRSNNWWSWVRQPPGKGLEWIGGVYANSEITNYNSSLKSRVSISQDAWRNKFSLKLKSVTDADTAVYYCVRGPNHWEYFDSGNNEYFEFWGQGALVTVSSA | SALTQPPSVSGAPGQRVTISCTGTSSNIENYHAFWYQQFSGMAPKLLIRDNDKRPSGVSDRFSGSKSGASASLTITGLQTDDEADYYCQSYDSGLRSYIFASGTRLTV | 14.671352 | 13.425488 | 233 | 216 | 129 | 103 | 129 | 108 | 35 | ab 1485 heavy chain | ab 1485 light chain | homo sapiens | homo sapiens | G | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 15 | 7 | 0.88 | HL | train |
7kdd_D_E | 7kdd | hcmv postfusion gb in complex with sm5-1 fab | no | viral protein/immune system | 2020-10-08 | 2021-03-17 | electron microscopy | 3.5 | N.A. | N.A. | 33674318 | 10.1126/sciadv.abf3178 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV1 | D | E | QVQLVQSGAEVRKPGASVKVSCKASGYSLKDHYMVWVRQAPGQGLEWMGWINPQSGGTGYGQKFQGRVTMTRDTSTNTAYMILSSLRSDDTAVYFCARDGAKTVSNSGLSLLYYHNRLDAWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGGGGGAGGGGGHHHHHHGSWSHPQFEK | QSVLTQPPSVSAAPGQMVTISCSGSSSNIGKNYVSWYQQLPGAAPKLLIFDNNKRPSGTPDRFSGSKSGTSATLVITGLQTGDEADYYCGTPDRSLSVIFGGGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAEVRKPGASVKVSCKASGYSLKDHYMVWVRQAPGQGLEWMGWINPQSGGTGYGQKFQGRVTMTRDTSTNTAYMILSSLRSDDTAVYFCARDGAKTVSNSGLSLLYYHNRLDAWGQGTMVTVSS | QSVLTQPPSVSAAPGQMVTISCSGSSSNIGKNYVSWYQQLPGAAPKLLIFDNNKRPSGTPDRFSGSKSGTSATLVITGLQTGDEADYYCGTPDRSLSVIFGGGTKVTVLG | 14.795757 | 13.560521 | 261 | 215 | 131 | 110 | 131 | 110 | 40 | sm5-1 fab antibody heavy chain | sm5-1 fab antibody light chain | homo sapiens | homo sapiens | A | protein | envelope glycoprotein b | human cytomegalovirus (strain towne) | 34 | 16 | 0.94 | HL | train |
7kdd_F_G | 7kdd | hcmv postfusion gb in complex with sm5-1 fab | no | viral protein/immune system | 2020-10-08 | 2021-03-17 | electron microscopy | 3.5 | N.A. | N.A. | 33674318 | 10.1126/sciadv.abf3178 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV1 | F | G | QVQLVQSGAEVRKPGASVKVSCKASGYSLKDHYMVWVRQAPGQGLEWMGWINPQSGGTGYGQKFQGRVTMTRDTSTNTAYMILSSLRSDDTAVYFCARDGAKTVSNSGLSLLYYHNRLDAWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGGGGGAGGGGGHHHHHHGSWSHPQFEK | QSVLTQPPSVSAAPGQMVTISCSGSSSNIGKNYVSWYQQLPGAAPKLLIFDNNKRPSGTPDRFSGSKSGTSATLVITGLQTGDEADYYCGTPDRSLSVIFGGGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAEVRKPGASVKVSCKASGYSLKDHYMVWVRQAPGQGLEWMGWINPQSGGTGYGQKFQGRVTMTRDTSTNTAYMILSSLRSDDTAVYFCARDGAKTVSNSGLSLLYYHNRLDAWGQGTMVTVSS | QSVLTQPPSVSAAPGQMVTISCSGSSSNIGKNYVSWYQQLPGAAPKLLIFDNNKRPSGTPDRFSGSKSGTSATLVITGLQTGDEADYYCGTPDRSLSVIFGGGTKVTVLG | 14.802444 | 13.558861 | 261 | 215 | 131 | 110 | 131 | 110 | 39 | sm5-1 fab antibody heavy chain | sm5-1 fab antibody light chain | homo sapiens | homo sapiens | B | protein | envelope glycoprotein b | human cytomegalovirus (strain towne) | 34 | 16 | 0.89 | HL | train |
7kdd_H_I | 7kdd | hcmv postfusion gb in complex with sm5-1 fab | no | viral protein/immune system | 2020-10-08 | 2021-03-17 | electron microscopy | 3.5 | N.A. | N.A. | 33674318 | 10.1126/sciadv.abf3178 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV1 | H | I | QVQLVQSGAEVRKPGASVKVSCKASGYSLKDHYMVWVRQAPGQGLEWMGWINPQSGGTGYGQKFQGRVTMTRDTSTNTAYMILSSLRSDDTAVYFCARDGAKTVSNSGLSLLYYHNRLDAWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGGGGGAGGGGGHHHHHHGSWSHPQFEK | QSVLTQPPSVSAAPGQMVTISCSGSSSNIGKNYVSWYQQLPGAAPKLLIFDNNKRPSGTPDRFSGSKSGTSATLVITGLQTGDEADYYCGTPDRSLSVIFGGGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAEVRKPGASVKVSCKASGYSLKDHYMVWVRQAPGQGLEWMGWINPQSGGTGYGQKFQGRVTMTRDTSTNTAYMILSSLRSDDTAVYFCARDGAKTVSNSGLSLLYYHNRLDAWGQGTMVTVSS | QSVLTQPPSVSAAPGQMVTISCSGSSSNIGKNYVSWYQQLPGAAPKLLIFDNNKRPSGTPDRFSGSKSGTSATLVITGLQTGDEADYYCGTPDRSLSVIFGGGTKVTVLG | 14.787402 | 13.54011 | 261 | 215 | 131 | 110 | 131 | 110 | 41 | sm5-1 fab antibody heavy chain | sm5-1 fab antibody light chain | homo sapiens | homo sapiens | C | protein | envelope glycoprotein b | human cytomegalovirus (strain towne) | 34 | 16 | 0.94 | HL | train |
7kdm_C | 7kdm | ricin bound to vhh antibody v5g6 | no | toxin | 2020-10-08 | 2021-08-04 | x-ray diffraction | 2.3 | 0.238 | 0.187 | 34089718 | 10.1016/j.jmb.2021.167086 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | QVQLAESGGGLVQAGGSLRLSCAASGRTFSDYAMGWFRQAPGKERDFVAGITSSGGGTYYADSVKGRFTITRDNYKNTLYLQMDSLKPEDTAVYYCKGTADGSSSLGYLEVWGQGTLVTVSSEPKTPKPQ | N.A. | QLAESGGGLVQAGGSLRLSCAASGRTFSDYAMGWFRQAPGKERDFVAGITSSGGGTYYADSVKGRFTITRDNYKNTLYLQMDSLKPEDTAVYYCKGTADGSSSLGYLEVWGQGTLVTV | N.A. | 13.566735 | 0 | 130 | 0 | 109 | 0 | 118 | 0 | 0 | anti-ron nanobody | N.A. | lama glama | N.A. | A;B | protein;protein | ricin chain a;ricin chain b | ricinus communis;ricinus communis | 12;46 | 6;11 | 0.86;0.42 | H_only | train |
7kdm_F | 7kdm | ricin bound to vhh antibody v5g6 | no | toxin | 2020-10-08 | 2021-08-04 | x-ray diffraction | 2.3 | 0.238 | 0.187 | 34089718 | 10.1016/j.jmb.2021.167086 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | QVQLAESGGGLVQAGGSLRLSCAASGRTFSDYAMGWFRQAPGKERDFVAGITSSGGGTYYADSVKGRFTITRDNYKNTLYLQMDSLKPEDTAVYYCKGTADGSSSLGYLEVWGQGTLVTVSSEPKTPKPQ | N.A. | QLAESGGGLVQAGGSLRLSCAASGRTFSDYAMGWFRQAPGKERDFVAGITSSGGGTYYADSVKGRFTITRDNYKNTLYLQMDSLKPEDTAVYYCKGTADGSSSLGYLEVWGQGTLVTV | N.A. | 13.553175 | 0 | 130 | 0 | 109 | 0 | 118 | 0 | 0 | anti-ron nanobody | N.A. | lama glama | N.A. | D;E | protein;protein | ricin chain a;ricin chain b | ricinus communis;ricinus communis | 13;46 | 6;11 | 0.75;0.41 | H_only | train |
7kd6_C_D | 7kd6 | insulin receptor l1-cr plus alphact fragment in co-complex with fv 83-7 and single-chain insulin sci-b | no | signaling protein | 2020-10-08 | 2021-10-13 | x-ray diffraction | 2.6 | 0.221 | 0.189 | 36181268 | 10.1016/j.bpj.2022.09.038 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV4 | C | D | AGSQVQLKESGPGLVAPSQSLSITCTVSGFPLTAYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARDPYGSKPMDYWGQGTSVTVSSSLVPR | AGSDIVMSQSPSSLVVSVGEKVTMSCKSSQSLLYSSNQKNFLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYFRYRTFGGGTKLEIKSSDYKD | SQVQLKESGPGLVAPSQSLSITCTVSGFPLTAYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARDPYGSKPMDYWGQGTSVTVSSSLVP | GSDIVMSQSPSSLVVSVGEKVTMSCKSSQSLLYSSNQKNFLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYFRYRTFGGGTKLEIKS | 14.202436 | 13.945647 | 126 | 121 | 123 | 115 | 123 | 115 | 47 | fv 83-7 heavy chain | fv 83-7 light chain | mus musculus | mus musculus | E | protein | insulin receptor subunit alpha | homo sapiens | 38 | 17 | 0.85 | HL | train |
7kd6_I_J | 7kd6 | insulin receptor l1-cr plus alphact fragment in co-complex with fv 83-7 and single-chain insulin sci-b | no | signaling protein | 2020-10-08 | 2021-10-13 | x-ray diffraction | 2.6 | 0.221 | 0.189 | 36181268 | 10.1016/j.bpj.2022.09.038 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV4 | I | J | AGSQVQLKESGPGLVAPSQSLSITCTVSGFPLTAYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARDPYGSKPMDYWGQGTSVTVSSSLVPR | AGSDIVMSQSPSSLVVSVGEKVTMSCKSSQSLLYSSNQKNFLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYFRYRTFGGGTKLEIKSSDYKD | SQVQLKESGPGLVAPSQSLSITCTVSGFPLTAYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARDPYGSKPMDYWGQGTSVTVSSSLVP | GSDIVMSQSPSSLVVSVGEKVTMSCKSSQSLLYSSNQKNFLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYFRYRTFGGGTKLEIKS | 14.056383 | 13.938581 | 126 | 121 | 123 | 115 | 123 | 115 | 46 | fv 83-7 heavy chain | fv 83-7 light chain | mus musculus | mus musculus | K | protein | insulin receptor subunit alpha | homo sapiens | 38 | 17 | 0.85 | HL | train |
7kd6_O_P | 7kd6 | insulin receptor l1-cr plus alphact fragment in co-complex with fv 83-7 and single-chain insulin sci-b | no | signaling protein | 2020-10-08 | 2021-10-13 | x-ray diffraction | 2.6 | 0.221 | 0.189 | 36181268 | 10.1016/j.bpj.2022.09.038 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV4 | O | P | AGSQVQLKESGPGLVAPSQSLSITCTVSGFPLTAYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARDPYGSKPMDYWGQGTSVTVSSSLVPR | AGSDIVMSQSPSSLVVSVGEKVTMSCKSSQSLLYSSNQKNFLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYFRYRTFGGGTKLEIKSSDYKD | SQVQLKESGPGLVAPSQSLSITCTVSGFPLTAYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARDPYGSKPMDYWGQGTSVTVSSSLVPR | AGSDIVMSQSPSSLVVSVGEKVTMSCKSSQSLLYSSNQKNFLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYFRYRTFGGGTKLEIK | 14.429503 | 13.954239 | 126 | 121 | 124 | 115 | 124 | 115 | 47 | fv 83-7 heavy chain | fv 83-7 light chain | mus musculus | mus musculus | Q | protein | insulin receptor subunit alpha | homo sapiens | 37 | 17 | 0.85 | HL | train |
7kd6_U_V | 7kd6 | insulin receptor l1-cr plus alphact fragment in co-complex with fv 83-7 and single-chain insulin sci-b | no | signaling protein | 2020-10-08 | 2021-10-13 | x-ray diffraction | 2.6 | 0.221 | 0.189 | 36181268 | 10.1016/j.bpj.2022.09.038 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV4 | U | V | AGSQVQLKESGPGLVAPSQSLSITCTVSGFPLTAYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARDPYGSKPMDYWGQGTSVTVSSSLVPR | AGSDIVMSQSPSSLVVSVGEKVTMSCKSSQSLLYSSNQKNFLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYFRYRTFGGGTKLEIKSSDYKD | SQVQLKESGPGLVAPSQSLSITCTVSGFPLTAYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARDPYGSKPMDYWGQGTSVTVSS | GSDIVMSQSPSSLVVSVGEKVTMSCKSSQSLLYSSNQKNFLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYFRYRTFGGGTKLEIK | 13.655509 | 13.858058 | 126 | 121 | 119 | 114 | 119 | 114 | 47 | fv 83-7 heavy chain | fv 83-7 light chain | mus musculus | mus musculus | W | protein | insulin receptor subunit alpha | homo sapiens | 42 | 18 | 0.82 | HL | train |
7ke1_A_B | 7ke1 | factor h enhancing human antibody fragment (fab) to meningococcal factor h binding protein | no | immune system | 2020-10-09 | 2021-06-09 | x-ray diffraction | 1.5 | 0.183 | 0.162 | 34125873 | 10.1371/journal.ppat.1009655 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | A | B | QVQLVESGGGLVQPGGSLRLSCVTSGFTFRSYAMTWVRQAPGKGLEWVSSISHSGGSTKYADSVKGRLTISRDDSMDTLYLQMNSLRAEDTAIYYCAKDQISYPAASPLDYWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKLEHHHHHH | AEIVLTQSPGTLSLSPGERATLSCRASQSFSSFSLAWYQQKPGQAPRLLIYAPSNRATGIADRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKLYACEVTHQGLSSPVTKSFNRGECS | QVQLVESGGGLVQPGGSLRLSCVTSGFTFRSYAMTWVRQAPGKGLEWVSSISHSGGSTKYADSVKGRLTISRDDSMDTLYLQMNSLRAEDTAIYYCAKDQISYPAASPLDYWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | EIVLTQSPGTLSLSPGERATLSCRASQSFSSFSLAWYQQKPGQAPRLLIYAPSNRATGIADRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKLYACEVTHQGLSSPVTKSFNRGE | 21.200474 | 23.111828 | 235 | 217 | 217 | 214 | 222 | 214 | 89 | immunoglobulin gamma, heavy chain fd fragment | immunoglobulin gamma, kappa light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
7ke1_C_D | 7ke1 | factor h enhancing human antibody fragment (fab) to meningococcal factor h binding protein | no | immune system | 2020-10-09 | 2021-06-09 | x-ray diffraction | 1.5 | 0.183 | 0.162 | 34125873 | 10.1371/journal.ppat.1009655 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | C | D | QVQLVESGGGLVQPGGSLRLSCVTSGFTFRSYAMTWVRQAPGKGLEWVSSISHSGGSTKYADSVKGRLTISRDDSMDTLYLQMNSLRAEDTAIYYCAKDQISYPAASPLDYWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKLEHHHHHH | AEIVLTQSPGTLSLSPGERATLSCRASQSFSSFSLAWYQQKPGQAPRLLIYAPSNRATGIADRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKLYACEVTHQGLSSPVTKSFNRGECS | QVQLVESGGGLVQPGGSLRLSCVTSGFTFRSYAMTWVRQAPGKGLEWVSSISHSGGSTKYADSVKGRLTISRDDSMDTLYLQMNSLRAEDTAIYYCAKDQISYPAASPLDYWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | EIVLTQSPGTLSLSPGERATLSCRASQSFSSFSLAWYQQKPGQAPRLLIYAPSNRATGIADRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKLYACEVTHQGLSSPVTKSFNRGE | 21.076988 | 23.168545 | 235 | 217 | 216 | 214 | 222 | 214 | 89 | immunoglobulin gamma, heavy chain fd fragment | immunoglobulin gamma, kappa light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
7kdu_C | 7kdu | ricin bound to vhh antibody v5e4 | no | toxin | 2020-10-09 | 2021-08-04 | x-ray diffraction | 2.81 | 0.294 | 0.237 | 34089718 | 10.1016/j.jmb.2021.167086 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | NAQVQLVETGGGLVQAGGSLRLSCVASGGTFSSYAMGWFRQAPGKERDFVAGISLSGAGTYYQDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCKATGERGYGDQGYLEVWGRGTLVTVSSEPKTPKPQ | N.A. | NAQVQLVETGGGLVQAGGSLRLSCVASGGTFSSYAMGWFRQAPGKERDFVAGISLSGAGTYYQDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCKATGERGYGDQGYLEVWGRGTLVTVSSEPKT | N.A. | 13.406974 | 0 | 133 | 0 | 98 | 0 | 129 | 0 | 0 | vhh antibody v5e4 | N.A. | vicugna pacos | N.A. | A;B | protein;protein | ricin chain a;ricin chain b | ricinus communis;ricinus communis | 12;44 | 6;11 | 1.0;0.46 | H_only | train |
7kej_G_J | 7kej | bdbv-289 bound to ebov gpdmuc makona | no | viral protein/immune system | 2020-10-11 | 2021-06-23 | electron microscopy | 3.8 | N.A. | N.A. | 33852862 | 10.1016/j.celrep.2021.108984 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV3 | G | J | MELGLRWVFLVAILEGVQCQVQLVQSGAEVKKPGSSVKVSCKASGATFGSDTVTWVRQAPGQGLEWMGGIIPFFGEANYAQRFQGRVTITADKSTNTAYMELSSLRSEDTAVYFCARQINEMATFGEIHYYTYMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | MGWSCIILFLVATATGVHGSELTQDPAVSVALGQTVRITCQGDSLRNYYASWYQQKPRQAPVLVFYGKNNRPSGIPDRFSGSSSGNTASLTISGAQAEDEADYYCNSRDSSSNHLVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | VQLVQSGAEVKKPGSSVKVSCKASGATFGSDTVTWVRQAPGQGLEWMGGIIPFFGEANYAQRFQGRVTITADKSTNTAYMELSSLRSEDTAVYFCARQINEMATFGEIHYYTYMDVWGQGTLVTVSSAS | GSELTQDPAVSVALGQTVRITCQGDSLRNYYASWYQQKPRQAPVLVFYGKNNRPSGIPDRFSGSSSGNTASLTISGAQAEDEADYYCNSRDSSSNHLVFGGGTKLTVLSQ | 15.731814 | 13.694193 | 251 | 231 | 129 | 110 | 129 | 110 | 48 | antibody fab heavy chain (hc) bdbv-289 | antibody fab light chain (lc) bdbv-289 | homo sapiens | homo sapiens | A | protein | virion spike glycoprotein | ebola virus | 57 | 25 | 0.89 | HL | train |
7kej_H_K | 7kej | bdbv-289 bound to ebov gpdmuc makona | no | viral protein/immune system | 2020-10-11 | 2021-06-23 | electron microscopy | 3.8 | N.A. | N.A. | 33852862 | 10.1016/j.celrep.2021.108984 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV3 | H | K | MELGLRWVFLVAILEGVQCQVQLVQSGAEVKKPGSSVKVSCKASGATFGSDTVTWVRQAPGQGLEWMGGIIPFFGEANYAQRFQGRVTITADKSTNTAYMELSSLRSEDTAVYFCARQINEMATFGEIHYYTYMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | MGWSCIILFLVATATGVHGSELTQDPAVSVALGQTVRITCQGDSLRNYYASWYQQKPRQAPVLVFYGKNNRPSGIPDRFSGSSSGNTASLTISGAQAEDEADYYCNSRDSSSNHLVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | VQLVQSGAEVKKPGSSVKVSCKASGATFGSDTVTWVRQAPGQGLEWMGGIIPFFGEANYAQRFQGRVTITADKSTNTAYMELSSLRSEDTAVYFCARQINEMATFGEIHYYTYMDVWGQGTLVTVSSAS | GSELTQDPAVSVALGQTVRITCQGDSLRNYYASWYQQKPRQAPVLVFYGKNNRPSGIPDRFSGSSSGNTASLTISGAQAEDEADYYCNSRDSSSNHLVFGGGTKLTVLSQ | 15.731819 | 13.694193 | 251 | 231 | 129 | 110 | 129 | 110 | 48 | antibody fab heavy chain (hc) bdbv-289 | antibody fab light chain (lc) bdbv-289 | homo sapiens | homo sapiens | B | protein | virion spike glycoprotein | ebola virus | 57 | 25 | 0.89 | HL | train |
7kej_I_L | 7kej | bdbv-289 bound to ebov gpdmuc makona | no | viral protein/immune system | 2020-10-11 | 2021-06-23 | electron microscopy | 3.8 | N.A. | N.A. | 33852862 | 10.1016/j.celrep.2021.108984 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV3 | I | L | MELGLRWVFLVAILEGVQCQVQLVQSGAEVKKPGSSVKVSCKASGATFGSDTVTWVRQAPGQGLEWMGGIIPFFGEANYAQRFQGRVTITADKSTNTAYMELSSLRSEDTAVYFCARQINEMATFGEIHYYTYMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | MGWSCIILFLVATATGVHGSELTQDPAVSVALGQTVRITCQGDSLRNYYASWYQQKPRQAPVLVFYGKNNRPSGIPDRFSGSSSGNTASLTISGAQAEDEADYYCNSRDSSSNHLVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | VQLVQSGAEVKKPGSSVKVSCKASGATFGSDTVTWVRQAPGQGLEWMGGIIPFFGEANYAQRFQGRVTITADKSTNTAYMELSSLRSEDTAVYFCARQINEMATFGEIHYYTYMDVWGQGTLVTVSSAS | GSELTQDPAVSVALGQTVRITCQGDSLRNYYASWYQQKPRQAPVLVFYGKNNRPSGIPDRFSGSSSGNTASLTISGAQAEDEADYYCNSRDSSSNHLVFGGGTKLTVLSQ | 15.731817 | 13.69419 | 251 | 231 | 129 | 110 | 129 | 110 | 48 | antibody fab heavy chain (hc) bdbv-289 | antibody fab light chain (lc) bdbv-289 | homo sapiens | homo sapiens | C | protein | virion spike glycoprotein | ebola virus | 57 | 25 | 0.89 | HL | train |
7keo_A_B | 7keo | crystal structure of k29-linked di-ubiquitin in complex with synthetic antigen binding fragment | no | protein binding | 2020-10-11 | 2021-07-28 | x-ray diffraction | 2.9 | 0.282 | 0.236 | 34239127 | 10.1038/s41589-021-00823-5 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | A | B | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVASIYSYYGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYGFAGQPETWYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQAYVEPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVASIYSYYGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYGFAGQPETWYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQAYVEPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.122095 | 23.058945 | 235 | 215 | 227 | 214 | 227 | 214 | 116 | synthetic antigen binding fragment, heavy chain | synthetic antigen binding fragment, light chain | homo sapiens | homo sapiens | C;D | protein;protein | ubiquitin;ubiquitin | homo sapiens;homo sapiens | 23;35 | 9;18 | 0.82;1.0 | HL | train |
7keo_E_F | 7keo | crystal structure of k29-linked di-ubiquitin in complex with synthetic antigen binding fragment | no | protein binding | 2020-10-11 | 2021-07-28 | x-ray diffraction | 2.9 | 0.282 | 0.236 | 34239127 | 10.1038/s41589-021-00823-5 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | E | F | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVASIYSYYGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYGFAGQPETWYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQAYVEPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVASIYSYYGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYGFAGQPETWYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQAYVEPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.87979 | 23.093842 | 235 | 215 | 225 | 214 | 225 | 214 | 114 | synthetic antigen binding fragment, heavy chain | synthetic antigen binding fragment, light chain | homo sapiens | homo sapiens | G;H | protein;protein | ubiquitin;ubiquitin | homo sapiens;homo sapiens | 24;40 | 8;21 | 0.73;1.0 | HL | train |
7ket_A_B | 7ket | factor h enhancing human antibody fragment (fab) to meningococcal factor h binding protein | no | immune system | 2020-10-12 | 2021-06-09 | x-ray diffraction | 2 | 0.281 | 0.234 | 34125873 | 10.1371/journal.ppat.1009655 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | A | B | QVQLVESGGGLVQPGGSLRLSCVTSGFTFRSYAMTWVRQAPGKGLEWVSSISHSGGSTKYADSVKGRLTISRDDSMDTLYLQMNSLRAEDTAIYYCAKDQISYPAASPLDYWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKLEHHHHHH | AEIVLTQSPGTLSLSPGERATLSCRASQSFSSFSLAWYQQKPGQAPRLLIYAPSNRATGIADRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKLYACEVTHQGLSSPVTKSFNRGECS | QVQLVESGGGLVQPGGSLRLSCVTSGFTFRSYAMTWVRQAPGKGLEWVSSISHSGGSTKYADSVKGRLTISRDDSMDTLYLQMNSLRAEDTAIYYCAKDQISYPAASPLDYWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | IVLTQSPGTLSLSPGERATLSCRASQSFSSFSLAWYQQKPGQAPRLLIYAPSNRATGIADRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKLYACEVTHQGLSSPVTKSFNRGEC | 21.807413 | 22.651625 | 235 | 217 | 217 | 209 | 223 | 214 | 92 | immunoglobulin gamma, heavy chain fd fragment | immunoglobulin gamma, kappa light chain | homo sapiens | homo sapiens | C | protein | factor h binding protein | neisseria meningitidis | 49 | 19 | 0.83 | HL | train |
7anq_B | 7anq | complete pcsk9 c-ter domain in complex with vhh p1.40 | no | hydrolase | 2020-10-12 | 2021-10-20 | x-ray diffraction | 2.2 | 0.256 | 0.213 | 36566984 | 10.1016/j.molmet.2022.101662 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVKLEESGGGLVQAGGSLRLSCSPSDRTFSAYAMGWFRQVPGREREFVATIRDSDASIYYTDSVKGRFTISRDNAKNTVYLQMNSLIPDDTAVYYCAARQYYSGRVYSTFREEYDYWGQGTQVTVSS | N.A. | QVKLEESGGGLVQAGGSLRLSCSPSDRTFSAYAMGWFRQVPGREREFVATIRDSDASIYYTDSVKGRFTISRDNAKNTVYLQMNSLIPDDTAVYYCAARQYYSGRVYSTFREEYDYWGQGTQVTVSS | N.A. | 13.85703 | 0 | 127 | 0 | 127 | 0 | 127 | 0 | 0 | vhh p1.40 minibody anti-cter pcsk9 | N.A. | lama glama | N.A. | A | protein | proprotein convertase subtilisin/kexin type 9 | homo sapiens | 45 | 5 | 0.28 | H_only | train |
7kew_G_J | 7kew | bundibugyo virus gp (mucin deleted) bound to antibody fab bdbv-43 | no | viral protein/immune system | 2020-10-13 | 2021-04-28 | electron microscopy | 4.16 | N.A. | N.A. | 33852862 | 10.1016/j.celrep.2021.108984 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | G | J | MELGLRWVFLVAILEGVQCQVQLVQSGAEVKKPGSSVKVSCRASGDSFSRKYGISWVRQAPGQGFEWMGTIMPIVGLTTSAQKFQGRVTITADKSTSTAHMELNSLTSEDTAIYYCARDEIIGARPHWFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | MGWSCIILFLVATATGVHEIVMTQSPAIMSVSPGKRATLSCRASQSVSSNLAWYQRKPGQAPRLLIYGSSTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCLQYYNWPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGSSVKVSCRASGDSFSRKYGISWVRQAPGQGFEWMGTIMPIVGLTTSAQKFQGRVTITADKSTSTAHMELNSLTSEDTAIYYCARDEIIGARPHWFDSWGQGTLVTVS | EIVMTQSPAIMSVSPGKRATLSCRASQSVSSNLAWYQRKPGQAPRLLIYGSSTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCLQYYNWPRTFGQGTKVEI | 13.82885 | 12.997515 | 246 | 232 | 122 | 106 | 122 | 106 | 48 | bdbv-43 fab heavy chain | bdbv-43 fab light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein 1 | bundibugyo ebolavirus | 44 | 18 | 0.78 | HL | train |
7kew_H_K | 7kew | bundibugyo virus gp (mucin deleted) bound to antibody fab bdbv-43 | no | viral protein/immune system | 2020-10-13 | 2021-04-28 | electron microscopy | 4.16 | N.A. | N.A. | 33852862 | 10.1016/j.celrep.2021.108984 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | H | K | MELGLRWVFLVAILEGVQCQVQLVQSGAEVKKPGSSVKVSCRASGDSFSRKYGISWVRQAPGQGFEWMGTIMPIVGLTTSAQKFQGRVTITADKSTSTAHMELNSLTSEDTAIYYCARDEIIGARPHWFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | MGWSCIILFLVATATGVHEIVMTQSPAIMSVSPGKRATLSCRASQSVSSNLAWYQRKPGQAPRLLIYGSSTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCLQYYNWPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGSSVKVSCRASGDSFSRKYGISWVRQAPGQGFEWMGTIMPIVGLTTSAQKFQGRVTITADKSTSTAHMELNSLTSEDTAIYYCARDEIIGARPHWFDSWGQGTLVTVS | EIVMTQSPAIMSVSPGKRATLSCRASQSVSSNLAWYQRKPGQAPRLLIYGSSTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCLQYYNWPRTFGQGTKVEI | 13.828869 | 12.997533 | 246 | 232 | 122 | 106 | 122 | 106 | 48 | bdbv-43 fab heavy chain | bdbv-43 fab light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein 1 | bundibugyo ebolavirus | 44 | 18 | 0.78 | HL | train |
7kew_I_L | 7kew | bundibugyo virus gp (mucin deleted) bound to antibody fab bdbv-43 | no | viral protein/immune system | 2020-10-13 | 2021-04-28 | electron microscopy | 4.16 | N.A. | N.A. | 33852862 | 10.1016/j.celrep.2021.108984 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | I | L | MELGLRWVFLVAILEGVQCQVQLVQSGAEVKKPGSSVKVSCRASGDSFSRKYGISWVRQAPGQGFEWMGTIMPIVGLTTSAQKFQGRVTITADKSTSTAHMELNSLTSEDTAIYYCARDEIIGARPHWFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | MGWSCIILFLVATATGVHEIVMTQSPAIMSVSPGKRATLSCRASQSVSSNLAWYQRKPGQAPRLLIYGSSTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCLQYYNWPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGSSVKVSCRASGDSFSRKYGISWVRQAPGQGFEWMGTIMPIVGLTTSAQKFQGRVTITADKSTSTAHMELNSLTSEDTAIYYCARDEIIGARPHWFDSWGQGTLVTVS | EIVMTQSPAIMSVSPGKRATLSCRASQSVSSNLAWYQRKPGQAPRLLIYGSSTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCLQYYNWPRTFGQGTKVEI | 13.828857 | 12.997487 | 246 | 232 | 122 | 106 | 122 | 106 | 48 | bdbv-43 fab heavy chain | bdbv-43 fab light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein 1 | bundibugyo ebolavirus | 44 | 18 | 0.78 | HL | train |
7kf9_G_J | 7kf9 | ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-296 and ebov-515 | no | viral protein/immune system | 2020-10-13 | 2021-04-28 | electron microscopy | 4.4 | N.A. | N.A. | 33852862 | 10.1016/j.celrep.2021.108984 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV1 | G | J | MELGLRWVFLVAILEGVQCQVQLVESGPGLVKPSQTLSLICTVSGGSISSGDFYWSWIRQPPGKGLEWIGFFYYSGITYYNPSLKSRVSISRDTSTNQFSLKLRSVTAADTAVYYCARVRGGRITLGQGDMYYYSGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | MGWSCIILFLVATATGVHQSVLTQPPSASGTPGQRVSISCSGSRSNIGGNTVDWYQQLPGTDPKLLIYSNDQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGHWVFGGGTKLTVLQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVESGPGLVKPSQTLSLICTVSGGSISSGDFYWSWIRQPPGKGLEWIGFFYYSGITYYNPSLKSRVSISRDTSTNQFSLKLRSVTAADTAVYYCARVRGGRITLGQGDMYYYSGMDVWGQGTLVTVSS | SVLTQPPSASGTPGQRVSISCSGSRSNIGGNTVDWYQQLPGTDPKLLIYSNDQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGHWVFGGGTKLTVL | 14.465996 | 13.189534 | 254 | 234 | 131 | 110 | 131 | 110 | 43 | antibody fab ebov-296 heavy chain | antibody fab ebov-296 light chain | homo sapiens | homo sapiens | A | protein | virion spike glycoprotein 1 | ebola virus | 54 | 26 | 0.84 | HL | train |
7kf9_H_K | 7kf9 | ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-296 and ebov-515 | no | viral protein/immune system | 2020-10-13 | 2021-04-28 | electron microscopy | 4.4 | N.A. | N.A. | 33852862 | 10.1016/j.celrep.2021.108984 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV1 | H | K | MELGLRWVFLVAILEGVQCQVQLVESGPGLVKPSQTLSLICTVSGGSISSGDFYWSWIRQPPGKGLEWIGFFYYSGITYYNPSLKSRVSISRDTSTNQFSLKLRSVTAADTAVYYCARVRGGRITLGQGDMYYYSGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | MGWSCIILFLVATATGVHQSVLTQPPSASGTPGQRVSISCSGSRSNIGGNTVDWYQQLPGTDPKLLIYSNDQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGHWVFGGGTKLTVLQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVESGPGLVKPSQTLSLICTVSGGSISSGDFYWSWIRQPPGKGLEWIGFFYYSGITYYNPSLKSRVSISRDTSTNQFSLKLRSVTAADTAVYYCARVRGGRITLGQGDMYYYSGMDVWGQGTLVTVSS | SVLTQPPSASGTPGQRVSISCSGSRSNIGGNTVDWYQQLPGTDPKLLIYSNDQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGHWVFGGGTKLTVL | 14.465975 | 13.189543 | 254 | 234 | 131 | 110 | 131 | 110 | 43 | antibody fab ebov-296 heavy chain | antibody fab ebov-296 light chain | homo sapiens | homo sapiens | B | protein | virion spike glycoprotein 1 | ebola virus | 54 | 26 | 0.84 | HL | train |
7kf9_I_L | 7kf9 | ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-296 and ebov-515 | no | viral protein/immune system | 2020-10-13 | 2021-04-28 | electron microscopy | 4.4 | N.A. | N.A. | 33852862 | 10.1016/j.celrep.2021.108984 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV1 | I | L | MELGLRWVFLVAILEGVQCQVQLVESGPGLVKPSQTLSLICTVSGGSISSGDFYWSWIRQPPGKGLEWIGFFYYSGITYYNPSLKSRVSISRDTSTNQFSLKLRSVTAADTAVYYCARVRGGRITLGQGDMYYYSGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | MGWSCIILFLVATATGVHQSVLTQPPSASGTPGQRVSISCSGSRSNIGGNTVDWYQQLPGTDPKLLIYSNDQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGHWVFGGGTKLTVLQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVESGPGLVKPSQTLSLICTVSGGSISSGDFYWSWIRQPPGKGLEWIGFFYYSGITYYNPSLKSRVSISRDTSTNQFSLKLRSVTAADTAVYYCARVRGGRITLGQGDMYYYSGMDVWGQGTLVTVSS | SVLTQPPSASGTPGQRVSISCSGSRSNIGGNTVDWYQQLPGTDPKLLIYSNDQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGHWVFGGGTKLTVL | 14.465974 | 13.189537 | 254 | 234 | 131 | 110 | 131 | 110 | 43 | antibody fab ebov-296 heavy chain | antibody fab ebov-296 light chain | homo sapiens | homo sapiens | C | protein | virion spike glycoprotein 1 | ebola virus | 54 | 26 | 0.84 | HL | train |
7kfb_G_J | 7kfb | ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-442 | no | viral protein/immune system | 2020-10-13 | 2021-04-28 | electron microscopy | 3.9 | N.A. | N.A. | 33852862 | 10.1016/j.celrep.2021.108984 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | G | J | EVQLVESGGGLVKPGGSLRLSCTGSGGTGFTFKYAGMSWVRQAPGKGPEWIGRIKSRIDGGTTDYAAPVKDRFIVSRDDSRNTLYLQMNSLKTEDTAVYYCATGSGKGPSASFGESYYYYDFINVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | ESVLTQSPGTLSLSPGERATLSCRASQSISRKYLAWYQQKPGQAPRLLIYGSSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCHQYESSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC | EVQLVESGGGLVKPGGSLRLSCTGSGGTGFTFKYAGMSWVRQAPGKGPEWIGRIKSRIDGGTTDYAAPVKDRFIVSRDDSRNTLYLQMNSLKTEDTAVYYCATGSGKGPSASFGESYYYYDFINVWGKGTTVTVSS | ESVLTQSPGTLSLSPGERATLSCRASQSISRKYLAWYQQKPGQAPRLLIYGSSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCHQYESSPWTFGQGTKVEI | 15.370915 | 13.097326 | 240 | 215 | 136 | 107 | 136 | 107 | 40 | antibody fab ebov-442 heavy chain | antibody fab ebov-442 light chain | homo sapiens | homo sapiens | A | protein | virion spike glycoprotein 1 | ebola virus | 47 | 20 | 0.91 | HL | train |
7kfb_H_K | 7kfb | ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-442 | no | viral protein/immune system | 2020-10-13 | 2021-04-28 | electron microscopy | 3.9 | N.A. | N.A. | 33852862 | 10.1016/j.celrep.2021.108984 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | H | K | EVQLVESGGGLVKPGGSLRLSCTGSGGTGFTFKYAGMSWVRQAPGKGPEWIGRIKSRIDGGTTDYAAPVKDRFIVSRDDSRNTLYLQMNSLKTEDTAVYYCATGSGKGPSASFGESYYYYDFINVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | ESVLTQSPGTLSLSPGERATLSCRASQSISRKYLAWYQQKPGQAPRLLIYGSSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCHQYESSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC | EVQLVESGGGLVKPGGSLRLSCTGSGGTGFTFKYAGMSWVRQAPGKGPEWIGRIKSRIDGGTTDYAAPVKDRFIVSRDDSRNTLYLQMNSLKTEDTAVYYCATGSGKGPSASFGESYYYYDFINVWGKGTTVTVSS | ESVLTQSPGTLSLSPGERATLSCRASQSISRKYLAWYQQKPGQAPRLLIYGSSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCHQYESSPWTFGQGTKVEI | 15.370816 | 13.0973 | 240 | 215 | 136 | 107 | 136 | 107 | 40 | antibody fab ebov-442 heavy chain | antibody fab ebov-442 light chain | homo sapiens | homo sapiens | B | protein | virion spike glycoprotein 1 | ebola virus | 47 | 20 | 0.91 | HL | train |
7kfb_I_L | 7kfb | ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-442 | no | viral protein/immune system | 2020-10-13 | 2021-04-28 | electron microscopy | 3.9 | N.A. | N.A. | 33852862 | 10.1016/j.celrep.2021.108984 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | I | L | EVQLVESGGGLVKPGGSLRLSCTGSGGTGFTFKYAGMSWVRQAPGKGPEWIGRIKSRIDGGTTDYAAPVKDRFIVSRDDSRNTLYLQMNSLKTEDTAVYYCATGSGKGPSASFGESYYYYDFINVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | ESVLTQSPGTLSLSPGERATLSCRASQSISRKYLAWYQQKPGQAPRLLIYGSSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCHQYESSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC | EVQLVESGGGLVKPGGSLRLSCTGSGGTGFTFKYAGMSWVRQAPGKGPEWIGRIKSRIDGGTTDYAAPVKDRFIVSRDDSRNTLYLQMNSLKTEDTAVYYCATGSGKGPSASFGESYYYYDFINVWGKGTTVTVSS | ESVLTQSPGTLSLSPGERATLSCRASQSISRKYLAWYQQKPGQAPRLLIYGSSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCHQYESSPWTFGQGTKVEI | 15.37086 | 13.09738 | 240 | 215 | 136 | 107 | 136 | 107 | 40 | antibody fab ebov-442 heavy chain | antibody fab ebov-442 light chain | homo sapiens | homo sapiens | C | protein | virion spike glycoprotein 1 | ebola virus | 47 | 20 | 0.91 | HL | train |
7kfe_G_I | 7kfe | bundibugyo virus gp (mucin deleted) bound to antibody fab bdbv-329 | no | viral protein/immune system | 2020-10-13 | 2021-04-28 | electron microscopy | 6.6 | N.A. | N.A. | 33852862 | 10.1016/j.celrep.2021.108984 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | G | I | QVQLVQSGAEVKKPGSSVKVSCKASGGTFDTYAISWVRQAPGQGLEWMGGIIPVLGIVDYAQKFQGRVTITAAKFTNIAYMELSSLRSEDAAVYYCARGLRSLSPRGQEGPTPAPGWRRAQYHYYYMDVWGTGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | EIVMTQSPGTLSLSPGERATLSCRASQSVSSNYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGPDFTLTISRLEPEDFAVYYCQQYGSSPGTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC | QVQLVQSGAEVKKPGSSVKVSCKASGGTFDTYAISWVRQAPGQGLEWMGGIIPVLGIVDYAQKFQGRVTITAAKFTNIAYMELSSLRSEDAAVYYCARGLRSLSPRGQEGPTPAPGWRRAQYHYYYMDVWGTGTLVTVSS | EIVMTQSPGTLSLSPGERATLSCRASQSVSSNYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGPDFTLTISRLEPEDFAVYYCQQYGSSPGTFGGGTKVEIK | 15.170376 | 12.901276 | 244 | 215 | 140 | 108 | 140 | 108 | 52 | antibody bdbv-329 heavy chain | antibody bdbv-329 light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein 1 | bundibugyo ebolavirus | 50 | 22 | 0.88 | HL | train |
7kfe_H_J | 7kfe | bundibugyo virus gp (mucin deleted) bound to antibody fab bdbv-329 | no | viral protein/immune system | 2020-10-13 | 2021-04-28 | electron microscopy | 6.6 | N.A. | N.A. | 33852862 | 10.1016/j.celrep.2021.108984 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | H | J | QVQLVQSGAEVKKPGSSVKVSCKASGGTFDTYAISWVRQAPGQGLEWMGGIIPVLGIVDYAQKFQGRVTITAAKFTNIAYMELSSLRSEDAAVYYCARGLRSLSPRGQEGPTPAPGWRRAQYHYYYMDVWGTGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | EIVMTQSPGTLSLSPGERATLSCRASQSVSSNYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGPDFTLTISRLEPEDFAVYYCQQYGSSPGTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC | QVQLVQSGAEVKKPGSSVKVSCKASGGTFDTYAISWVRQAPGQGLEWMGGIIPVLGIVDYAQKFQGRVTITAAKFTNIAYMELSSLRSEDAAVYYCARGLRSLSPRGQEGPTPAPGWRRAQYHYYYMDVWGTGTLVTVSS | EIVMTQSPGTLSLSPGERATLSCRASQSVSSNYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGPDFTLTISRLEPEDFAVYYCQQYGSSPGTFGGGTKVEIK | 15.233375 | 12.935051 | 244 | 215 | 140 | 108 | 140 | 108 | 54 | antibody bdbv-329 heavy chain | antibody bdbv-329 light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein 1 | bundibugyo ebolavirus | 43 | 20 | 0.91 | HL | train |
7kfg_A_B | 7kfg | antibody fab bdbv-289 | no | immune system | 2020-10-13 | 2021-04-28 | x-ray diffraction | 3 | 0.268 | 0.221 | 33852862 | 10.1016/j.celrep.2021.108984 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGLV3 | A | B | QVQLVQSGAEVKKPGSSVKVSCKASGATFGSDTVTWVRQAPGQGLEWMGGIIPFFGEANYAQRFQGRVTITADKSTNTAYMELSSLRSEDTAVYFCARQINEMATFGEIHYYTYMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | GSELTQDPAVSVALGQTVRITCQGDSLRNYYASWYQQKPRQAPVLVFYGKNNRPSGIPDRFSGSSSGNTASLTISGAQAEDEADYYCNSRDSSSNHLVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAEVKKPGSSVKVSCKASGATFGSDTVTWVRQAPGQGLEWMGGIIPFFGEANYAQRFQGRVTITADKSTNTAYMELSSLRSEDTAVYFCARQINEMATFGEIHYYTYMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | GSELTQDPAVSVALGQTVRITCQGDSLRNYYASWYQQKPRQAPVLVFYGKNNRPSGIPDRFSGSSSGNTASLTISGAQAEDEADYYCNSRDSSSNHLVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 24.454887 | 22.719929 | 232 | 214 | 223 | 211 | 229 | 211 | 98 | antibody fab bdbv-289 heavy chain | antibody fab bdbv-289 light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
7kfh_G_J | 7kfh | ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-437 | no | viral protein/immune system | 2020-10-13 | 2021-04-28 | electron microscopy | 3.8 | N.A. | N.A. | 33852862 | 10.1016/j.celrep.2021.108984 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | G | J | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSRDIFSWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADKSTSTVFMELSGLRSEDTAVYFCARGPPLRGERSWFGESEKYDYFYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | QIVLTQSPGTLSLSPGERATLSCRASQSVSNSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSISRLEPEDFAVYYCQQYGTSPCTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSRDIFSWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADKSTSTVFMELSGLRSEDTAVYFCARGPPLRGERSWFGESEKYDYFYMDVWGKGTTVTVSS | QIVLTQSPGTLSLSPGERATLSCRASQSVSNSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSISRLEPEDFAVYYCQQYGTSPCTFGQGTKLEIK | 16.013353 | 13.12022 | 237 | 215 | 133 | 108 | 133 | 108 | 36 | antibody fab ebov-437 heavy chain | antibody fab ebov-437 light chain | homo sapiens | homo sapiens | A | protein | virion spike glycoprotein 1 | ebola virus | 53 | 20 | 0.8 | HL | train |
7kfh_H_K | 7kfh | ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-437 | no | viral protein/immune system | 2020-10-13 | 2021-04-28 | electron microscopy | 3.8 | N.A. | N.A. | 33852862 | 10.1016/j.celrep.2021.108984 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | H | K | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSRDIFSWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADKSTSTVFMELSGLRSEDTAVYFCARGPPLRGERSWFGESEKYDYFYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | QIVLTQSPGTLSLSPGERATLSCRASQSVSNSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSISRLEPEDFAVYYCQQYGTSPCTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSRDIFSWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADKSTSTVFMELSGLRSEDTAVYFCARGPPLRGERSWFGESEKYDYFYMDVWGKGTTVTVSS | QIVLTQSPGTLSLSPGERATLSCRASQSVSNSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSISRLEPEDFAVYYCQQYGTSPCTFGQGTKLEIK | 16.013332 | 13.120261 | 237 | 215 | 133 | 108 | 133 | 108 | 36 | antibody fab ebov-437 heavy chain | antibody fab ebov-437 light chain | homo sapiens | homo sapiens | B | protein | virion spike glycoprotein 1 | ebola virus | 53 | 20 | 0.8 | HL | train |
7kfh_I_L | 7kfh | ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-437 | no | viral protein/immune system | 2020-10-13 | 2021-04-28 | electron microscopy | 3.8 | N.A. | N.A. | 33852862 | 10.1016/j.celrep.2021.108984 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | I | L | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSRDIFSWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADKSTSTVFMELSGLRSEDTAVYFCARGPPLRGERSWFGESEKYDYFYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | QIVLTQSPGTLSLSPGERATLSCRASQSVSNSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSISRLEPEDFAVYYCQQYGTSPCTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSRDIFSWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADKSTSTVFMELSGLRSEDTAVYFCARGPPLRGERSWFGESEKYDYFYMDVWGKGTTVTVSS | QIVLTQSPGTLSLSPGERATLSCRASQSVSNSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSISRLEPEDFAVYYCQQYGTSPCTFGQGTKLEIK | 16.01335 | 13.120239 | 237 | 215 | 133 | 108 | 133 | 108 | 36 | antibody fab ebov-437 heavy chain | antibody fab ebov-437 light chain | homo sapiens | homo sapiens | C | protein | virion spike glycoprotein 1 | ebola virus | 53 | 20 | 0.8 | HL | train |
7kez_H_L | 7kez | crystal structure of bh1 fab variant (cdr h3 loop design 16_0325) in complex with vegf | no | immune system | 2020-10-13 | 2021-11-10 | x-ray diffraction | 2.31 | 0.235 | 0.178 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGGAVAGTGVYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTGHHHHHHHHG | DIQMTQSPSSLSASVGDRVTITCRASQDIPRSISGYVAWYQQKPGKAPKLLIYWGSYLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGGAVAGTGVYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQDIPRSISGYVAWYQQKPGKAPKLLIYWGSYLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 21.256058 | 23.701834 | 239 | 218 | 220 | 216 | 224 | 216 | 92 | anti-vegf-a fab bh1 heavy chain | anti-vegf-a fab bh1 light chain | homo sapiens | homo sapiens | V | protein | isoform l-vegf206 of vascular endothelial growth factor a | homo sapiens | 37 | 20 | 0.87 | HL | train |
7kf1_A_B | 7kf1 | crystal structure of bh1 fab variant (cdr h3 loop design 14_0130) in complex with vegf | no | immune system | 2020-10-13 | 2021-11-10 | x-ray diffraction | 2.45 | 0.232 | 0.189 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | A | B | EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAKLGIGYYYYGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTGHHHHHHHHG | DIQMTQSPSSLSASVGDRVTITCRASQDIPRSISGYVAWYQQKPGKAPKLLIYWGSYLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAKLGIGYYYYGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRASQDIPRSISGYVAWYQQKPGKAPKLLIYWGSYLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 21.060678 | 23.745913 | 237 | 218 | 215 | 216 | 221 | 216 | 94 | anti-vegf-a fab bh1 heavy chain | anti-vegf-a fab bh1 light chain | homo sapiens | homo sapiens | C | protein | isoform l-vegf206 of vascular endothelial growth factor a | homo sapiens | 34 | 17 | 0.85 | HL | train |
7kf1_D_E | 7kf1 | crystal structure of bh1 fab variant (cdr h3 loop design 14_0130) in complex with vegf | no | immune system | 2020-10-13 | 2021-11-10 | x-ray diffraction | 2.45 | 0.232 | 0.189 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | D | E | EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAKLGIGYYYYGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTGHHHHHHHHG | DIQMTQSPSSLSASVGDRVTITCRASQDIPRSISGYVAWYQQKPGKAPKLLIYWGSYLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAKLGIGYYYYGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQDIPRSISGYVAWYQQKPGKAPKLLIYWGSYLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 21.2471 | 23.791555 | 237 | 218 | 216 | 217 | 222 | 217 | 91 | anti-vegf-a fab bh1 heavy chain | anti-vegf-a fab bh1 light chain | homo sapiens | homo sapiens | F | protein | isoform l-vegf206 of vascular endothelial growth factor a | homo sapiens | 34 | 17 | 0.85 | HL | train |
7kf1_G_I | 7kf1 | crystal structure of bh1 fab variant (cdr h3 loop design 14_0130) in complex with vegf | no | immune system | 2020-10-13 | 2021-11-10 | x-ray diffraction | 2.45 | 0.232 | 0.189 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | G | I | EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAKLGIGYYYYGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTGHHHHHHHHG | DIQMTQSPSSLSASVGDRVTITCRASQDIPRSISGYVAWYQQKPGKAPKLLIYWGSYLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAKLGIGYYYYGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQDIPRSISGYVAWYQQKPGKAPKLLIYWGSYLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 21.090485 | 23.84128 | 237 | 218 | 217 | 217 | 222 | 217 | 91 | anti-vegf-a fab bh1 heavy chain | anti-vegf-a fab bh1 light chain | homo sapiens | homo sapiens | J | protein | isoform l-vegf206 of vascular endothelial growth factor a | homo sapiens | 34 | 17 | 0.85 | HL | train |
7kf1_H_L | 7kf1 | crystal structure of bh1 fab variant (cdr h3 loop design 14_0130) in complex with vegf | no | immune system | 2020-10-13 | 2021-11-10 | x-ray diffraction | 2.45 | 0.232 | 0.189 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAKLGIGYYYYGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTGHHHHHHHHG | DIQMTQSPSSLSASVGDRVTITCRASQDIPRSISGYVAWYQQKPGKAPKLLIYWGSYLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAKLGIGYYYYGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | DIQMTQSPSSLSASVGDRVTITCRASQDIPRSISGYVAWYQQKPGKAPKLLIYWGSYLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 21.814335 | 23.874968 | 237 | 218 | 225 | 217 | 225 | 217 | 102 | anti-vegf-a fab bh1 heavy chain | anti-vegf-a fab bh1 light chain | homo sapiens | homo sapiens | V | protein | isoform l-vegf206 of vascular endothelial growth factor a | homo sapiens | 35 | 17 | 0.85 | HL | train |
7d9z_H_L | 7d9z | crystal structure of anti-basigin fab fragment | no | immune system | 2020-10-14 | 2021-10-20 | x-ray diffraction | 1.12 | 0.15 | 0.121 | 34625749 | 10.1038/s41594-021-00665-8 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | QSVEESGGRLVTPGTPLTLTCTVSGFSLSDYAMSWVRQAPGKGLEWIGIIYASGSTYYASWAKGRFTISKTSTTVDLKITSPTTEDTATYFCARYYAGSDIWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK | ADVVMTQTPSSVSAAVGGTVTINCQASQSISAYLAWYQQKPGQPPKLLIYDASDLASGVSSRFKGSGSGTQFTLTISDLECADAATYYCQTYYAIITYGAAFGGGTEVVVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDCTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | SVEESGGRLVTPGTPLTLTCTVSGFSLSDYAMSWVRQAPGKGLEWIGIIYASGSTYYASWAKGRFTISKTSTTVDLKITSPTTEDTATYFCARYYAGSDIWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | ADVVMTQTPSSVSAAVGGTVTINCQASQSISAYLAWYQQKPGQPPKLLIYDASDLASGVSSRFKGSGSGTQFTLTISDLECADAATYYCQTYYAIITYGAAFGGGTEVVVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDCTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 20.633633 | 23.421518 | 217 | 218 | 207 | 217 | 213 | 217 | 97 | heavy chain of antibody fab fragment | light chain of antibody fab fragment | oryctolagus cuniculus | oryctolagus cuniculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
7kfv_H_L | 7kfv | structural basis for a germline-biased antibody response to sars-cov-2 (rbd:c1a-b12 fab) | no | immune system/viral protein | 2020-10-15 | 2020-12-02 | x-ray diffraction | 2.1 | 0.215 | 0.183 | 33200128 | 10.1101/2020.11.13.381533 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGATYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGDVSGYRYGLDYWGQGTLVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDR | DIQLTQSPSSLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQLISYPGTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGATYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGDVSGYRYGLDYWGQGTLVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDR | DIQLTQSPSSLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQLISYPGTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.507719 | 23.318817 | 225 | 214 | 225 | 214 | 225 | 214 | 101 | heavy chain of antibody c1a-b12 fab | light chain of antibody c1a-b3 fab | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 68 | 24 | 0.71 | HL | train |
7kfv_C_D | 7kfv | structural basis for a germline-biased antibody response to sars-cov-2 (rbd:c1a-b12 fab) | no | immune system/viral protein | 2020-10-15 | 2020-12-02 | x-ray diffraction | 2.1 | 0.215 | 0.183 | 33200128 | 10.1101/2020.11.13.381533 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | C | D | EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGATYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGDVSGYRYGLDYWGQGTLVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDR | DIQLTQSPSSLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQLISYPGTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGATYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGDVSGYRYGLDYWGQGTLVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDR | DIQLTQSPSSLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQLISYPGTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.74606 | 23.288048 | 225 | 214 | 225 | 214 | 225 | 214 | 103 | heavy chain of antibody c1a-b12 fab | light chain of antibody c1a-b3 fab | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 70 | 25 | 0.71 | HL | train |
7kfv_F_G | 7kfv | structural basis for a germline-biased antibody response to sars-cov-2 (rbd:c1a-b12 fab) | no | immune system/viral protein | 2020-10-15 | 2020-12-02 | x-ray diffraction | 2.1 | 0.215 | 0.183 | 33200128 | 10.1101/2020.11.13.381533 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | F | G | EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGATYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGDVSGYRYGLDYWGQGTLVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDR | DIQLTQSPSSLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQLISYPGTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGATYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGDVSGYRYGLDYWGQGTLVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | DIQLTQSPSSLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQLISYPGTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.888594 | 22.51291 | 225 | 214 | 219 | 214 | 222 | 214 | 102 | heavy chain of antibody c1a-b12 fab | light chain of antibody c1a-b3 fab | homo sapiens | homo sapiens | E | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 72 | 26 | 0.72 | HL | train |
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