PDB_ID_chain
stringlengths
6
10
PDB_ID
stringlengths
4
4
Title
stringlengths
4
230
Mutation(s)
stringclasses
2 values
Classification
stringclasses
305 values
Deposit_date
stringdate
1976-03-17 00:00:00
2026-01-20 00:00:00
Release_date
stringdate
1976-05-19 00:00:00
2026-02-25 00:00:00
Method
stringclasses
5 values
Resolution
stringclasses
459 values
R_free
stringclasses
227 values
R_work
stringclasses
211 values
PMID
stringlengths
4
8
DOI
stringlengths
4
68
Model_index
int64
0
76
Asym_ID_type
stringclasses
2 values
Ab_type
stringclasses
30 values
H_subgroup
stringclasses
8 values
L_subgroup
stringclasses
19 values
H_chain_ID
stringclasses
60 values
L_chain_ID
stringclasses
58 values
H_fas_seq
stringlengths
4
919
L_fas_seq
stringlengths
4
627
H_filled_pdb_seq
stringlengths
4
896
L_filled_pdb_seq
stringlengths
4
523
H_mean_radius
float64
0
79.7
L_mean_radius
float64
0
84.3
H_fas_seq_len
int64
0
919
L_fas_seq_len
int64
0
627
H_pdb_seq_len
int64
0
879
L_pdb_seq_len
int64
0
523
H_filled_seq_len
int64
0
896
L_filled_seq_len
int64
0
523
HL_inf_res_num
int64
0
175
H_mol_name
stringlengths
2
331
L_mol_name
stringlengths
2
151
H_species
stringclasses
68 values
L_species
stringclasses
42 values
Ag_chain_ID(s)
stringclasses
279 values
Ag_type(s)
stringclasses
16 values
Ag_mol_name(s)
stringlengths
2
390
Ag_species
stringclasses
743 values
Ab_ag_inf_res_num
stringlengths
1
11
CDR_inf_res_num
stringclasses
444 values
CDR_inf_res_ratio
stringlengths
1
19
hl_label
stringclasses
3 values
split
stringclasses
1 value
7k8x_D_F
7k8x
structure of the sars-cov-2 s 2p trimer in complex with the human neutralizing antibody fab fragment, c121 (state 1)
no
viral protein/immune system
2020-09-27
2020-10-21
electron microscopy
3.9
N.A.
N.A.
33045718
10.1038/s41586-020-2852-1
0
auth_asym_id
VH:VL
IGHV1
IGLV2
D
F
QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWISPVSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARAPLFPTGVLAGDYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEGSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTLVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWISPVSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARAPLFPTGVLAGDYYYYGMDVWGQGTTVTVS
ALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEGSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTLVFGGGTKLTVL
14.438384
13.067867
241
216
128
108
128
108
39
c121 fab heavy chain
c121 fab light chain
homo sapiens
homo sapiens
B;C
protein;protein
spike glycoprotein;spike glycoprotein
severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2
43;30
18;5
0.82;0.31
HL
train
7k8y_G_I
7k8y
structure of the sars-cov-2 s 2p trimer in complex with the human neutralizing antibody fab fragment, c121 (state 2)
no
viral protein/immune system
2020-09-27
2020-10-21
electron microscopy
4.4
N.A.
N.A.
33045718
10.1038/s41586-020-2852-1
0
auth_asym_id
VH:VL
IGHV1
IGLV2
G
I
QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWISPVSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARAPLFPTGVLAGDYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEGSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTLVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWISPVSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARAPLFPTGVLAGDYYYYGMDVWGQGTTVTVS
ALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEGSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSSTLVFGGGTKLTVL
14.131076
12.876162
241
216
128
108
128
108
41
c121 fab heavy chain
c121 fab light chain
homo sapiens
homo sapiens
B;D
protein;protein
spike glycoprotein;spike glycoprotein
severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2
44;18
20;7
0.8;0.64
HL
train
7k8z_H_L
7k8z
structure of the sars-cov-2 s 2p trimer in complex with the human neutralizing antibody fab fragment, c135
no
viral protein/immune system
2020-09-27
2020-10-21
electron microscopy
3.5
N.A.
N.A.
33045718
10.1038/s41586-020-2852-1
0
auth_asym_id
VH:VL
IGHV3
IGKV1
H
L
QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVIPFDGRNKYYADSVTGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCASSSGYLFHSDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
DIQMTQSPSTLSASVGDRVTITCRASQSISNWLAWFQQKPGKAPKLLIYEASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVIPFDGRNKYYADSVTGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCASSSGYLFHSDYWGQGTLVTVS
DIQMTQSPSTLSASVGDRVTITCRASQSISNWLAWFQQKPGKAPKLLIYEASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYPWTFGQGTKVEI
13.445262
12.963397
231
214
118
106
118
106
37
c135 fab heavy chain
c135 fab light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
28
14
0.93
HL
train
7k8z_M_N
7k8z
structure of the sars-cov-2 s 2p trimer in complex with the human neutralizing antibody fab fragment, c135
no
viral protein/immune system
2020-09-27
2020-10-21
electron microscopy
3.5
N.A.
N.A.
33045718
10.1038/s41586-020-2852-1
0
auth_asym_id
VH:VL
IGHV3
IGKV1
M
N
QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVIPFDGRNKYYADSVTGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCASSSGYLFHSDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
DIQMTQSPSTLSASVGDRVTITCRASQSISNWLAWFQQKPGKAPKLLIYEASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVIPFDGRNKYYADSVTGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCASSSGYLFHSDYWGQGTLVTV
DIQMTQSPSTLSASVGDRVTITCRASQSISNWLAWFQQKPGKAPKLLIYEASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYPWTFGQGTKVEI
13.421267
12.963388
231
214
117
106
117
106
41
c135 fab heavy chain
c135 fab light chain
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
29
16
0.94
HL
train
7k90_M_N
7k90
structure of the sars-cov-2 s 6p trimer in complex with the human neutralizing antibody fab fragment, c144
no
viral protein/immune system
2020-09-27
2020-10-21
electron microscopy
3.24
N.A.
N.A.
33045718
10.1038/s41586-020-2852-1
0
auth_asym_id
VH:VL
IGHV3
IGLV2
M
N
EVQLVESGGGLIQPGGSLRLSCAASGFTVSNNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDKSKNTLYLQMNRLRAEDTAVYYCAREGEVEGYNDFWSGYSRDRYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTRVFGTGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLVESGGGLIQPGGSLRLSCAASGFTVSNNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDKSKNTLYLQMNRLRAEDTAVYYCAREGEVEGYNDFWSGYSRDRYYFDYWGQGTLVTVS
ALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTRVFGTGTKVTVL
15.199274
13.11189
243
216
129
108
129
108
48
c144 fab heavy chain
c144 fab light chain
homo sapiens
homo sapiens
A;B
protein;protein
spike glycoprotein;spike glycoprotein
severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2
43;22
20;9
0.87;1.0
HL
train
7k90_O_P
7k90
structure of the sars-cov-2 s 6p trimer in complex with the human neutralizing antibody fab fragment, c144
no
viral protein/immune system
2020-09-27
2020-10-21
electron microscopy
3.24
N.A.
N.A.
33045718
10.1038/s41586-020-2852-1
0
auth_asym_id
VH:VL
IGHV3
IGLV2
O
P
EVQLVESGGGLIQPGGSLRLSCAASGFTVSNNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDKSKNTLYLQMNRLRAEDTAVYYCAREGEVEGYNDFWSGYSRDRYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTRVFGTGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLVESGGGLIQPGGSLRLSCAASGFTVSNNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDKSKNTLYLQMNRLRAEDTAVYYCAREGEVEGYNDFWSGYSRDRYYFDYWGQGTLVTVS
ALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTRVFGTGTKVTVL
15.19803
13.106778
243
216
129
108
129
108
48
c144 fab heavy chain
c144 fab light chain
homo sapiens
homo sapiens
A;C
protein;protein
spike glycoprotein;spike glycoprotein
severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2
22;44
9;20
1.0;0.87
HL
train
7k90_H_L
7k90
structure of the sars-cov-2 s 6p trimer in complex with the human neutralizing antibody fab fragment, c144
no
viral protein/immune system
2020-09-27
2020-10-21
electron microscopy
3.24
N.A.
N.A.
33045718
10.1038/s41586-020-2852-1
0
auth_asym_id
VH:VL
IGHV3
IGLV2
H
L
EVQLVESGGGLIQPGGSLRLSCAASGFTVSNNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDKSKNTLYLQMNRLRAEDTAVYYCAREGEVEGYNDFWSGYSRDRYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTRVFGTGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLVESGGGLIQPGGSLRLSCAASGFTVSNNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDKSKNTLYLQMNRLRAEDTAVYYCAREGEVEGYNDFWSGYSRDRYYFDYWGQGTLVTVS
ALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTRVFGTGTKVTVL
15.219125
13.108188
243
216
129
108
129
108
48
c144 fab heavy chain
c144 fab light chain
homo sapiens
homo sapiens
B;C
protein;protein
spike glycoprotein;spike glycoprotein
severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2
42;18
19;7
0.86;1.0
HL
train
7d5p_C
7d5p
structure of norc transporter in an outward-open conformation in complex with a single-chain indian camelid antibody
no
membrane protein
2020-09-27
2021-06-09
x-ray diffraction
3.65
0.318
0.297
34226658
10.1038/s42003-021-02357-x
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
QVQLEESGGGSVQAGGSLRLSCAASGYMYSTYSTYCMGWFRQAPGKEREGVAFIKRGDHSTYYTDSVKGRFTISQDSAKNTVSLQMNNLKPEDTAIYYCAADFAHSFLLSVHSGAGQYSYWGQGTQVTVSS
N.A.
QVQLEESGGGSVQAGGSLRLSCAASGYMYSTYSTYCMGWFRQAPGKEREGVAFIKRGDHSTYYTDSVKGRFTISQDSAKNTVSLQMNNLKPEDTAIYYCAADFAHSFLLSVHSGAGQYSYWGQGTQVTVSS
N.A.
14.408893
0
131
0
131
0
131
0
0
icab
N.A.
camelus dromedarius
N.A.
A
protein
drug transporter, putative
staphylococcus aureus subsp. aureus col
67
22
0.85
H_only
train
7d5p_D
7d5p
structure of norc transporter in an outward-open conformation in complex with a single-chain indian camelid antibody
no
membrane protein
2020-09-27
2021-06-09
x-ray diffraction
3.65
0.318
0.297
34226658
10.1038/s42003-021-02357-x
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
QVQLEESGGGSVQAGGSLRLSCAASGYMYSTYSTYCMGWFRQAPGKEREGVAFIKRGDHSTYYTDSVKGRFTISQDSAKNTVSLQMNNLKPEDTAIYYCAADFAHSFLLSVHSGAGQYSYWGQGTQVTVSS
N.A.
QVQLEESGGGSVQAGGSLRLSCAASGYMYSTYSTYCMGWFRQAPGKEREGVAFIKRGDHSTYYTDSVKGRFTISQDSAKNTVSLQMNNLKPEDTAIYYCAADFAHSFLLSVHSGAGQYSYWGQGTQVTVSS
N.A.
14.406273
0
131
0
131
0
131
0
0
icab
N.A.
camelus dromedarius
N.A.
B
protein
drug transporter, putative
staphylococcus aureus subsp. aureus col
66
22
0.85
H_only
train
7d5q_C
7d5q
structure of norc transporter (k398a mutant) in an outward-open conformation in complex with a single-chain indian camelid antibody
yes
membrane protein
2020-09-27
2021-06-09
x-ray diffraction
3.6
0.315
0.308
34226658
10.1038/s42003-021-02357-x
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
QVQLEESGGGSVQAGGSLRLSCAASGYMYSTYSTYCMGWFRQAPGKEREGVAFIKRGDHSTYYTDSVKGRFTISQDSAKNTVSLQMNNLKPEDTAIYYCAADFAHSFLLSVHSGAGQYSYWGQGTQVTVSS
N.A.
QVQLEESGGGSVQAGGSLRLSCAASGYMYSTYSTYCMGWFRQAPGKEREGVAFIKRGDHSTYYTDSVKGRFTISQDSAKNTVSLQMNNLKPEDTAIYYCAADFAHSFLLSVHSGAGQYSYWGQGTQVTVSS
N.A.
14.361865
0
131
0
131
0
131
0
0
icab
N.A.
camelus dromedarius
N.A.
A
protein
drug transporter, putative
staphylococcus aureus subsp. aureus col
71
25
0.86
H_only
train
7d5q_D
7d5q
structure of norc transporter (k398a mutant) in an outward-open conformation in complex with a single-chain indian camelid antibody
yes
membrane protein
2020-09-27
2021-06-09
x-ray diffraction
3.6
0.315
0.308
34226658
10.1038/s42003-021-02357-x
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
QVQLEESGGGSVQAGGSLRLSCAASGYMYSTYSTYCMGWFRQAPGKEREGVAFIKRGDHSTYYTDSVKGRFTISQDSAKNTVSLQMNNLKPEDTAIYYCAADFAHSFLLSVHSGAGQYSYWGQGTQVTVSS
N.A.
QVQLEESGGGSVQAGGSLRLSCAASGYMYSTYSTYCMGWFRQAPGKEREGVAFIKRGDHSTYYTDSVKGRFTISQDSAKNTVSLQMNNLKPEDTAIYYCAADFAHSFLLSVHSGAGQYSYWGQGTQVTVSS
N.A.
14.353087
0
131
0
131
0
131
0
0
icab
N.A.
camelus dromedarius
N.A.
B
protein
drug transporter, putative
staphylococcus aureus subsp. aureus col
65
23
0.85
H_only
train
7k93_E
7k93
denv2 ns1 in complex with neutralizing 2b7 single chain fab variable region (scfv)
no
viral protein
2020-09-28
2020-12-23
x-ray diffraction
2.89
0.269
0.223
33414220
10.1126/science.abc0476
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
SNAEVQLQQSGPELVKPGASVKMSCKASGCTLTNCFMHWMKQKPGQDLEWIGYINPYNDMTKYSENFKGKATLTSDKSSSTAFMELSSLTSEDSAVYYCARGYLLRTGCFDYWGQGTTLTVSSGGSGGGSGGGSGGGSGGNIVLTQSPASLAVSLGQRATISCRASESVDSYGYSFMHWYQQKPGQPPKVLIYLASNLESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQNNENPLTFGAGTKLELK
N.A.
EVQLQQSGPELVKPGASVKMSCKASGCTLTNCFMHWMKQKPGQDLEWIGYINPYNDMTKYSENFKGKATLTSDKSSSTAFMELSSLTSEDSAVYYCARGYLLRTGCFDYWGQGTTLTVSSGGSGGGSGGGSGGGSGGNIVLTQSPASLAVSLGQRATISCRASESVDSYGYSFMHWYQQKPGQPPKVLIYLASNLESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQNNENPLTFGAGTKLELK
N.A.
17.521898
0
251
0
233
0
248
0
0
2b7 single chain fab variable region
N.A.
mus musculus
N.A.
A
protein
non-structural protein 1
dengue virus 2
42
14
0.78
H_only
train
7k93_G
7k93
denv2 ns1 in complex with neutralizing 2b7 single chain fab variable region (scfv)
no
viral protein
2020-09-28
2020-12-23
x-ray diffraction
2.89
0.269
0.223
33414220
10.1126/science.abc0476
0
auth_asym_id
scFv
N.A.
N.A.
G
N.A.
SNAEVQLQQSGPELVKPGASVKMSCKASGCTLTNCFMHWMKQKPGQDLEWIGYINPYNDMTKYSENFKGKATLTSDKSSSTAFMELSSLTSEDSAVYYCARGYLLRTGCFDYWGQGTTLTVSSGGSGGGSGGGSGGGSGGNIVLTQSPASLAVSLGQRATISCRASESVDSYGYSFMHWYQQKPGQPPKVLIYLASNLESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQNNENPLTFGAGTKLELK
N.A.
EVQLQQSGPELVKPGASVKMSCKASGCTLTNCFMHWMKQKPGQDLEWIGYINPYNDMTKYSENFKGKATLTSDKSSSTAFMELSSLTSEDSAVYYCARGYLLRTGCFDYWGQGTTLTVSSGGSGGGSGGGSGGGSGGNIVLTQSPASLAVSLGQRATISCRASESVDSYGYSFMHWYQQKPGQPPKVLIYLASNLESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQNNENPLTFGAGTKLELK
N.A.
17.481504
0
251
0
232
0
248
0
0
2b7 single chain fab variable region
N.A.
mus musculus
N.A.
B
protein
non-structural protein 1
dengue virus 2
40
16
0.89
H_only
train
7k93_I
7k93
denv2 ns1 in complex with neutralizing 2b7 single chain fab variable region (scfv)
no
viral protein
2020-09-28
2020-12-23
x-ray diffraction
2.89
0.269
0.223
33414220
10.1126/science.abc0476
0
auth_asym_id
scFv
N.A.
N.A.
I
N.A.
SNAEVQLQQSGPELVKPGASVKMSCKASGCTLTNCFMHWMKQKPGQDLEWIGYINPYNDMTKYSENFKGKATLTSDKSSSTAFMELSSLTSEDSAVYYCARGYLLRTGCFDYWGQGTTLTVSSGGSGGGSGGGSGGGSGGNIVLTQSPASLAVSLGQRATISCRASESVDSYGYSFMHWYQQKPGQPPKVLIYLASNLESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQNNENPLTFGAGTKLELK
N.A.
EVQLQQSGPELVKPGASVKMSCKASGCTLTNCFMHWMKQKPGQDLEWIGYINPYNDMTKYSENFKGKATLTSDKSSSTAFMELSSLTSEDSAVYYCARGYLLRTGCFDYWGQGTTLTVSSGGSGGGSGGGSGGGSGGNIVLTQSPASLAVSLGQRATISCRASESVDSYGYSFMHWYQQKPGQPPKVLIYLASNLESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQNNENPLTFGAGTKLELK
N.A.
17.558525
0
251
0
232
0
248
0
0
2b7 single chain fab variable region
N.A.
mus musculus
N.A.
C
protein
non-structural protein 1
dengue virus 2
37
15
0.94
H_only
train
7k93_K
7k93
denv2 ns1 in complex with neutralizing 2b7 single chain fab variable region (scfv)
no
viral protein
2020-09-28
2020-12-23
x-ray diffraction
2.89
0.269
0.223
33414220
10.1126/science.abc0476
0
auth_asym_id
scFv
N.A.
N.A.
K
N.A.
SNAEVQLQQSGPELVKPGASVKMSCKASGCTLTNCFMHWMKQKPGQDLEWIGYINPYNDMTKYSENFKGKATLTSDKSSSTAFMELSSLTSEDSAVYYCARGYLLRTGCFDYWGQGTTLTVSSGGSGGGSGGGSGGGSGGNIVLTQSPASLAVSLGQRATISCRASESVDSYGYSFMHWYQQKPGQPPKVLIYLASNLESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQNNENPLTFGAGTKLELK
N.A.
EVQLQQSGPELVKPGASVKMSCKASGCTLTNCFMHWMKQKPGQDLEWIGYINPYNDMTKYSENFKGKATLTSDKSSSTAFMELSSLTSEDSAVYYCARGYLLRTGCFDYWGQGTTLTVSSGGSGGGSGGGSGGGSGGNIVLTQSPASLAVSLGQRATISCRASESVDSYGYSFMHWYQQKPGQPPKVLIYLASNLESGVPARFSGSGSRTDFTLTIDPVEADDAATYYCQQNNENPLTFGAGTKLELK
N.A.
17.47584
0
251
0
232
0
248
0
0
2b7 single chain fab variable region
N.A.
mus musculus
N.A.
D
protein
non-structural protein 1
dengue virus 2
42
15
0.79
H_only
train
7d5u_D
7d5u
bace2 xaperone complex with n-{3-[(9s)-7-amino-2,2-difluoro-9-(prop-1-yn-1-yl)-6-oxa-8-azaspiro[3.5]non-7-en-9-yl]-4-fluorophenyl}-5-cyanopyridine-2-carboxamide
no
hydrolase/immune system
2020-09-28
2021-03-31
x-ray diffraction
2.04
0.254
0.207
33719429
10.1021/acs.jmedchem.0c01858
0
auth_asym_id
VH
IGHV3
N.A.
D
N.A.
AQVQLQESGGGLVQPGGSLRLSCAASGFTFSSAIMTWVRQAPGKGREWVSTIGSDGSITTYADSVKGRFTISRDNARNTLYLQMNSLKPEDTAVYYCTSAGRRGPGTQVTVSSH
N.A.
AQVQLQESGGGLVQPGGSLRLSCAASGFTFSSAIMTWVRQAPGKGREWVSTIGSDGSITTYADSVKGRFTISRDNARNTLYLQMNSLKPEDTAVYYCTSAGRRGPGTQVTVSSH
N.A.
13.454108
0
114
0
114
0
114
0
0
xaperone
N.A.
homo sapiens
N.A.
A
protein
beta-secretase 2
homo sapiens
46
11
0.46
H_only
train
7d5z_D_C
7d5z
crystal structure of ebv gh/gl bound with neutralizing antibody 1d8
no
viral protein
2020-09-28
2021-10-20
x-ray diffraction
4.2
0.277
0.246
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
D
C
MGWSCIILFLVATATGVHSEVQLVESGGRVVQPGGSLRLSCVTSGFTFSYYPIHWVRQGPGKGLEWVTMMSFDGTSDHCISSVKGRFVMSRDNSRNTLYLEMNKMRLEDTGVYYCARGGWKWPGGAFDVFGPGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYN...
MGWSCIILFLVATATGVHSDIVMTQTPPSLSASVGDRVTLTCRASQAIRNNLAWYQHKPGKAPKRLIYAASTLEDGVPSSFSGSGFGTDFTLTINSLQPEDFATYYCLQHSTYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGRVVQPGGSLRLSCVTSGFTFSYYPIHWVRQGPGKGLEWVTMMSFDGTSDHCISSVKGRFVMSRDNSRNTLYLEMNKMRLEDTGVYYCARGGWKWPGGAFDVFGPGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVE
DIVMTQTPPSLSASVGDRVTLTCRASQAIRNNLAWYQHKPGKAPKRLIYAASTLEDGVPSSFSGSGFGTDFTLTINSLQPEDFATYYCLQHSTYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.496916
22.601767
470
233
214
213
220
213
89
heavy chain of 1d8
light chain of 1d8
homo sapiens
homo sapiens
A
protein
envelope glycoprotein h
human gammaherpesvirus 4
47
16
0.76
HL
train
7d5z_H_G
7d5z
crystal structure of ebv gh/gl bound with neutralizing antibody 1d8
no
viral protein
2020-09-28
2021-10-20
x-ray diffraction
4.2
0.277
0.246
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
G
MGWSCIILFLVATATGVHSEVQLVESGGRVVQPGGSLRLSCVTSGFTFSYYPIHWVRQGPGKGLEWVTMMSFDGTSDHCISSVKGRFVMSRDNSRNTLYLEMNKMRLEDTGVYYCARGGWKWPGGAFDVFGPGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYN...
MGWSCIILFLVATATGVHSDIVMTQTPPSLSASVGDRVTLTCRASQAIRNNLAWYQHKPGKAPKRLIYAASTLEDGVPSSFSGSGFGTDFTLTINSLQPEDFATYYCLQHSTYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGRVVQPGGSLRLSCVTSGFTFSYYPIHWVRQGPGKGLEWVTMMSFDGTSDHCISSVKGRFVMSRDNSRNTLYLEMNKMRLEDTGVYYCARGGWKWPGGAFDVFGPGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVE
DIVMTQTPPSLSASVGDRVTLTCRASQAIRNNLAWYQHKPGKAPKRLIYAASTLEDGVPSSFSGSGFGTDFTLTINSLQPEDFATYYCLQHSTYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.485826
22.614536
470
233
214
213
220
213
90
heavy chain of 1d8
light chain of 1d8
homo sapiens
homo sapiens
E
protein
envelope glycoprotein h
human gammaherpesvirus 4
48
18
0.78
HL
train
7d5z_L_K
7d5z
crystal structure of ebv gh/gl bound with neutralizing antibody 1d8
no
viral protein
2020-09-28
2021-10-20
x-ray diffraction
4.2
0.277
0.246
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
L
K
MGWSCIILFLVATATGVHSEVQLVESGGRVVQPGGSLRLSCVTSGFTFSYYPIHWVRQGPGKGLEWVTMMSFDGTSDHCISSVKGRFVMSRDNSRNTLYLEMNKMRLEDTGVYYCARGGWKWPGGAFDVFGPGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYN...
MGWSCIILFLVATATGVHSDIVMTQTPPSLSASVGDRVTLTCRASQAIRNNLAWYQHKPGKAPKRLIYAASTLEDGVPSSFSGSGFGTDFTLTINSLQPEDFATYYCLQHSTYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGRVVQPGGSLRLSCVTSGFTFSYYPIHWVRQGPGKGLEWVTMMSFDGTSDHCISSVKGRFVMSRDNSRNTLYLEMNKMRLEDTGVYYCARGGWKWPGGAFDVFGPGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVE
DIVMTQTPPSLSASVGDRVTLTCRASQAIRNNLAWYQHKPGKAPKRLIYAASTLEDGVPSSFSGSGFGTDFTLTINSLQPEDFATYYCLQHSTYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.489552
22.603067
470
233
214
213
220
213
92
heavy chain of 1d8
light chain of 1d8
homo sapiens
homo sapiens
I
protein
envelope glycoprotein h
human gammaherpesvirus 4
50
18
0.82
HL
train
7d5z_P_O
7d5z
crystal structure of ebv gh/gl bound with neutralizing antibody 1d8
no
viral protein
2020-09-28
2021-10-20
x-ray diffraction
4.2
0.277
0.246
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
P
O
MGWSCIILFLVATATGVHSEVQLVESGGRVVQPGGSLRLSCVTSGFTFSYYPIHWVRQGPGKGLEWVTMMSFDGTSDHCISSVKGRFVMSRDNSRNTLYLEMNKMRLEDTGVYYCARGGWKWPGGAFDVFGPGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYN...
MGWSCIILFLVATATGVHSDIVMTQTPPSLSASVGDRVTLTCRASQAIRNNLAWYQHKPGKAPKRLIYAASTLEDGVPSSFSGSGFGTDFTLTINSLQPEDFATYYCLQHSTYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGRVVQPGGSLRLSCVTSGFTFSYYPIHWVRQGPGKGLEWVTMMSFDGTSDHCISSVKGRFVMSRDNSRNTLYLEMNKMRLEDTGVYYCARGGWKWPGGAFDVFGPGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVE
DIVMTQTPPSLSASVGDRVTLTCRASQAIRNNLAWYQHKPGKAPKRLIYAASTLEDGVPSSFSGSGFGTDFTLTINSLQPEDFATYYCLQHSTYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.499115
22.602203
470
233
214
213
220
213
90
heavy chain of 1d8
light chain of 1d8
homo sapiens
homo sapiens
M
protein
envelope glycoprotein h
human gammaherpesvirus 4
47
15
0.75
HL
train
7k9z_B_A
7k9z
crystal structure of sars-cov-2 receptor binding domain in complex with the fab fragments of neutralizing antibodies 298 and 52
no
immune system
2020-09-29
2020-10-28
x-ray diffraction
2.95
0.287
0.261
34135340
10.1038/s41467-021-23825-2
0
auth_asym_id
FabH:FabL
IGHV1
IGKV4
B
A
QVQLVQSGAEVKKPGASVKVSCKASGGTFSTYGISWVRQAPGQGLEWMGWISPNSGGTDLAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCASDPRDDIAGGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPPTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLVQSGAEVKKPGASVKVSCKASGGTFSTYGISWVRQAPGQGLEWMGWISPNSGGTDLAQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCASDPRDDIAGGYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPPTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
21.955555
23.622108
222
220
218
220
221
220
93
298 fab heavy chain
298 fab light chain
homo sapiens
homo sapiens
E
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
39
18
0.75
HL
train
7k9z_H_L
7k9z
crystal structure of sars-cov-2 receptor binding domain in complex with the fab fragments of neutralizing antibodies 298 and 52
no
immune system
2020-09-29
2020-10-28
x-ray diffraction
2.95
0.287
0.261
34135340
10.1038/s41467-021-23825-2
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
H
L
QVQLVQSGAEVKKPGSSVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGGIIPMFGTTNYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARDRGDTIDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
SDIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKAPKLLIYAASSLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQGNGFPLTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAEVKKPGSSVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGGIIPMFGTTNYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARDRGDTIDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
SDIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKAPKLLIYAASSLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQGNGFPLTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
22.351675
22.34734
220
215
212
212
217
212
92
52 fab heavy chain
52 fab light chain
homo sapiens
homo sapiens
E
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
55
20
0.71
HL
train
7k9i_H_L
7k9i
sars-cov-2 spike rbd in complex with neutralizing fab 2b04 (local refinement)
no
viral protein/immune system
2020-09-29
2021-09-29
electron microscopy
3.3
N.A.
N.A.
34655519
10.1016/j.celrep.2021.109881
0
auth_asym_id
VH:VL
IGHV4
IGLV7
H
L
QVQLKQSGPGLVAPSQSLSITCTVSGFSLINYAISWVRQPPGKGLEWLGVIWTGGGTNYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARKDYYGRYYGMDYWGQGTSVTVS
QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYNNHWVFGGGTKLTVL
QVQLKQSGPGLVAPSQSLSITCTVSGFSLINYAISWVRQPPGKGLEWLGVIWTGGGTNYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARKDYYGRYYGMDYWGQGTSVTVS
QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYNNHWVFGGGTKLTVL
13.986775
13.47188
119
109
119
109
119
109
51
2b04 heavy chain
2b04 light chain
mus musculus
mus musculus
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
32
17
0.89
HL
train
7k9k_H_L
7k9k
sars-cov-2 spike rbd in complex with neutralizing fab 2h04 (local refinement)
no
viral protein/immune system
2020-09-29
2021-09-29
electron microscopy
3.14
N.A.
N.A.
34655519
10.1016/j.celrep.2021.109881
0
auth_asym_id
VH:VL
IGHV1
IGKV6
H
L
EVQLQQSGAELVKPGASVKMSCKASGYTFTSYWITWVKQRPGQGLEWIGDIYPGSGSTKYNEKFRSEATLTVDTSSTTAYMQLSSLTSEDSAVYYCARWDFYGSRTFDYWGQGTTLTVSSA
DIVLTQSPAILSVSPGERVSFSCRASQNIGTIIHWYQQRTNGSPRLLIKYASESVSGIPSRFSGSGSGTDFTLSINSVESEDIADYYCQQSSSWPLTFGAGTKLEL
EVQLQQSGAELVKPGASVKMSCKASGYTFTSYWITWVKQRPGQGLEWIGDIYPGSGSTKYNEKFRSEATLTVDTSSTTAYMQLSSLTSEDSAVYYCARWDFYGSRTFDYWGQGTTLTVSSA
DIVLTQSPAILSVSPGERVSFSCRASQNIGTIIHWYQQRTNGSPRLLIKYASESVSGIPSRFSGSGSGTDFTLSINSVESEDIADYYCQQSSSWPLTFGAGTKLEL
14.029717
13.280012
121
106
121
106
121
106
44
2h04 heavy chain
2h04 light chain
mus musculus
mus musculus
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
34
18
0.9
HL
train
7akd_H_L
7akd
structure of the sars-cov-2 spike glycoprotein in complex with the 47d11 neutralizing antibody fab fragment
no
viral protein
2020-09-30
2021-05-19
electron microscopy
4
N.A.
N.A.
33958322
10.1126/sciadv.abf5632
0
auth_asym_id
VH:VL
IGHV4
IGKV3
H
L
QVQLQESGPGLVKPSETLSLTCSVSGGSISSHYWSWIRQPPGKGLEWIGYIYYSGSTNHNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGVLLWFGEPIFEIWGQGTMVTVSS
EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRLLIYGASTRAPGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGGGTKVEI
QVQLQESGPGLVKPSETLSLTCSVSGGSISSHYWSWIRQPPGKGLEWIGYIYYSGSTNHNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGVLLWFGEPIFEIWGQGTMVTVS
EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRLLIYGASTRAPGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGGGTKVEI
14.180083
13.412954
121
106
120
106
120
106
36
47d11 neutralizing antibody heavy chain
47d11 neutralizing antibody light chain
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
36
14
0.88
HL
train
7akd_D_E
7akd
structure of the sars-cov-2 spike glycoprotein in complex with the 47d11 neutralizing antibody fab fragment
no
viral protein
2020-09-30
2021-05-19
electron microscopy
4
N.A.
N.A.
33958322
10.1126/sciadv.abf5632
0
auth_asym_id
VH:VL
IGHV4
IGKV3
D
E
QVQLQESGPGLVKPSETLSLTCSVSGGSISSHYWSWIRQPPGKGLEWIGYIYYSGSTNHNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGVLLWFGEPIFEIWGQGTMVTVSS
EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRLLIYGASTRAPGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGGGTKVEI
QVQLQESGPGLVKPSETLSLTCSVSGGSISSHYWSWIRQPPGKGLEWIGYIYYSGSTNHNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGVLLWFGEPIFEIWGQGTMVTVS
EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRLLIYGASTRAPGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGGGTKVEI
14.179142
13.412966
121
106
120
106
120
106
32
47d11 neutralizing antibody heavy chain
47d11 neutralizing antibody light chain
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
34
15
0.88
HL
train
7d6i_B_C
7d6i
a neutralizing mab targeting receptor-binding-domain of sars-cov-2
no
antiviral protein,immune system
2020-09-30
2021-10-13
x-ray diffraction
3.41
0.255
0.226
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGLV6
B
C
EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCTRAGWVRGAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTHHHHHHHH
NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSNLWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMSWVRQAPGKGLEWVANIKQDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCTRAGWVRGAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSNLWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE
23.791609
21.216612
235
217
212
215
219
215
85
heavy chain of gh12-fab
light chain of gh12-fab
homo sapiens
homo sapiens
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
40
14
0.74
HL
train
7akj_H_L
7akj
structure of the sars-cov spike glycoprotein in complex with the 47d11 neutralizing antibody fab fragment
no
viral protein
2020-10-01
2021-05-19
electron microscopy
3.8
N.A.
N.A.
33958322
10.1126/sciadv.abf5632
0
auth_asym_id
VH:VL
IGHV4
IGKV3
H
L
QVQLQESGPGLVKPSETLSLTCSVSGGSISSHYWSWIRQPPGKGLEWIGYIYYSGSTNHNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGVLLWFGEPIFEIWGQGTMVTVSS
EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRLLIYGASTRAPGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGGGTKVEI
QVQLQESGPGLVKPSETLSLTCSVSGGSISSHYWSWIRQPPGKGLEWIGYIYYSGSTNHNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGVLLWFGEPIFEIWGQGTMVTVS
EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRLLIYGASTRAPGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGGGTKVEI
14.243056
13.52505
121
106
120
106
120
106
41
47d11 neutralizing antibody heavy chain
47d11 neutralizing antibody light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein
sars coronavirus wh20
35
13
0.81
HL
train
7akj_E_D
7akj
structure of the sars-cov spike glycoprotein in complex with the 47d11 neutralizing antibody fab fragment
no
viral protein
2020-10-01
2021-05-19
electron microscopy
3.8
N.A.
N.A.
33958322
10.1126/sciadv.abf5632
0
auth_asym_id
VH:VL
IGHV4
IGKV3
E
D
QVQLQESGPGLVKPSETLSLTCSVSGGSISSHYWSWIRQPPGKGLEWIGYIYYSGSTNHNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGVLLWFGEPIFEIWGQGTMVTVSS
EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRLLIYGASTRAPGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGGGTKVEI
QVQLQESGPGLVKPSETLSLTCSVSGGSISSHYWSWIRQPPGKGLEWIGYIYYSGSTNHNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGVLLWFGEPIFEIWGQGTMVTVS
EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRLLIYGASTRAPGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGGGTKVEI
14.242649
13.525041
121
106
120
106
120
106
41
47d11 neutralizing antibody heavy chain
47d11 neutralizing antibody light chain
homo sapiens
homo sapiens
B
protein
spike glycoprotein
sars coronavirus wh20
36
14
0.82
HL
train
7akj_G_F
7akj
structure of the sars-cov spike glycoprotein in complex with the 47d11 neutralizing antibody fab fragment
no
viral protein
2020-10-01
2021-05-19
electron microscopy
3.8
N.A.
N.A.
33958322
10.1126/sciadv.abf5632
0
auth_asym_id
VH:VL
IGHV4
IGKV3
G
F
QVQLQESGPGLVKPSETLSLTCSVSGGSISSHYWSWIRQPPGKGLEWIGYIYYSGSTNHNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGVLLWFGEPIFEIWGQGTMVTVSS
EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRLLIYGASTRAPGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGGGTKVEI
QVQLQESGPGLVKPSETLSLTCSVSGGSISSHYWSWIRQPPGKGLEWIGYIYYSGSTNHNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGVLLWFGEPIFEIWGQGTMVTVS
EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRLLIYGASTRAPGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGGGTKVEI
14.242871
13.525059
121
106
120
106
120
106
41
47d11 neutralizing antibody heavy chain
47d11 neutralizing antibody light chain
homo sapiens
homo sapiens
C
protein
spike glycoprotein
sars coronavirus wh20
36
14
0.82
HL
train
7kbb_A_B
7kbb
cryo-em structure of the hcmv pentamer bound by fabs 2-18 and 8i21
no
viral protein/immune system
2020-10-01
2021-08-11
electron microscopy
4.02
N.A.
N.A.
35275718
10.1126/sciadv.abm2546
0
auth_asym_id
VH:VL
IGHV3
IGKV1
A
B
EVQLVQSGGGLVQPGGSLRVSCAASGFSFSDHDMDWVRQAPGKGFEWVGRSRNKDYSSTTEYAASVRGRFTISRHTSEDLLYLELNTVKTEDTAVYFCARGPHHSDRSGYYGGTFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ
DIQMTQSPSSVSASVGDRVIITCRASQGISSWLAWYQQKPGRAPRLLIYDASTLESGVPSRFSGRGSGTEFTLTINSLQPEDFATYYCQQGNMFPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLVQSGGGLVQPGGSLRVSCAASGFSFSDHDMDWVRQAPGKGFEWVGRSRNKDYSSTTEYAASVRGRFTISRHTSEDLLYLELNTVKTEDTAVYFCARGPHHSDRSGYYGGTFDIWGQGTMVTVSS
DIQMTQSPSSVSASVGDRVIITCRASQGISSWLAWYQQKPGRAPRLLIYDASTLESGVPSRFSGRGSGTEFTLTINSLQPEDFATYYCQQGNMFPLTFGGGTKVEIK
14.067465
13.153047
240
214
127
107
127
107
46
2-18 fab heavy chain
2-18 fab light chain
homo sapiens
homo sapiens
C;E
protein;protein
envelope protein ul128;ul131a
human cytomegalovirus;human cytomegalovirus
20;32
10;15
0.91;0.88
HL
train
7kbb_H_L
7kbb
cryo-em structure of the hcmv pentamer bound by fabs 2-18 and 8i21
no
viral protein/immune system
2020-10-01
2021-08-11
electron microscopy
4.02
N.A.
N.A.
35275718
10.1126/sciadv.abm2546
0
auth_asym_id
VH:VL
IGHV3
IGKV3
H
L
LVELVESGGGVVQPGRSLRLSCAASGFTFSSDGMHWVRQSPGRGLEWVAFISSDGSTPYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAMYFCAKDWALFRWLRTFDHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ
ETVMTQSPATLSVSPGGRATLSCRASQSVGINLAWYQQKPGQAPRLLIYGASTRASGFPARFSGSGSGTEFTLTITSLQSEDFAVYYCQQYNDWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
LVELVESGGGVVQPGRSLRLSCAASGFTFSSDGMHWVRQSPGRGLEWVAFISSDGSTPYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAMYFCAKDWALFRWLRTFDHWGQGTLVTVSS
ETVMTQSPATLSVSPGGRATLSCRASQSVGINLAWYQQKPGQAPRLLIYGASTRASGFPARFSGSGSGTEFTLTITSLQSEDFAVYYCQQYNDWPPWTFGQGTKVEIK
14.061214
13.219999
234
215
122
108
122
108
44
8i21 fab heavy chain
8i21 fab light chain
homo sapiens
homo sapiens
D
protein
envelope glycoprotein ul130
human cytomegalovirus
75
22
0.55
HL
train
7kbt_E_F
7kbt
factor viii in complex with the anti-c2 domain antibody, g99
no
blood clotting/immune system
2020-10-02
2020-11-18
x-ray diffraction
4.15
0.338
0.3
N.A.
10.3389/fimmu.2021.697602
0
auth_asym_id
VH:VL
IGHV1
IGKV1
E
F
QVQLQQSGAELMKPGASVKISCKATGYTFSSYWIEWVKQRPGHGLEWIGEILPGSGSTNYNERFKGKASFTADSSSNTAYMQLSSLTSEDSAVYYCTRTSYYFGSSYDFDVWGAGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGP
DIQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSSVPKRFSGSRSGSDYSLTISSLDSEDFAVYYCLQYASYPYTFGGGTKVEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
QVQLQQSGAELMKPGASVKISCKATGYTFSSYWIEWVKQRPGHGLEWIGEILPGSGSTNYNERFKGKASFTADSSSNTAYMQLSSLTSEDSAVYYCTRTSYYFGSSYDFDVWGAGTTVTVSSA
MTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSSVPKRFSGSRSGSDYSLTISSLDSEDFAVYYCLQYASYPYTFGGGTKVEI
14.537435
13.303337
224
214
115
96
123
103
38
g99 heavy chain
g99 light chain
mus musculus
mus musculus
A
protein
coagulation factor viii,coagulation factor viii,coagulation factor viii,coagulation factor viii,coagulation factor viii
sus scrofa
52
26
0.9
HL
train
7kbm_A
7kbm
reverse transcriptase diabody with r83c mutation crystallized in c2
no
protein binding
2020-10-02
2021-03-10
x-ray diffraction
2
0.257
0.209
33636101
10.1016/j.str.2021.02.001
0
auth_asym_id
VHVL
N.A.
N.A.
A
N.A.
MEVQLVESGGGLVQPGGSLRLSCAASGFSLSTSGIGVTWVRQAPGKGLEWLATIWWDDDNRYADSVKGRFTISADTSKNTAYLQMNSLCAEDTAVYYCAQSAITSVTDSAMDHWGQGTLVTVSSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDISSYLNWYQQKPGKAPKLLIYYTSSLHSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYSKFPWTFGQGTKVEIKGSHHHHHH
N.A.
VQLVESGGGLVQPGGSLRLSCAASGFSLSTSGIGVTWVRQAPGKGLEWLATIWWDDDNRYADSVKGRFTISADTSKNTAYLQMNSLCAEDTAVYYCAQSAITSVTDSAMDHWGQGTLVTVSSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDISSYLNWYQQKPGKAPKLLIYYTSSLHSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYSKFPWTFGQGTKVEIK
N.A.
26.332943
0
244
0
230
0
234
0
0
single-chain scfv
N.A.
homo sapiens
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
7kbp_A
7kbp
herceptin diabody with r83t, e85c mutations
no
protein binding
2020-10-02
2021-03-10
x-ray diffraction
2.3
0.232
0.183
33636101
10.1016/j.str.2021.02.001
0
auth_asym_id
VHVL
N.A.
N.A.
A
N.A.
MEVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLTACDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKGSHHHHHH
N.A.
MEVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLTACDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKGSHH
N.A.
27.083122
0
241
0
233
0
237
0
0
single-chain fv
N.A.
homo sapiens
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
7kbp_B
7kbp
herceptin diabody with r83t, e85c mutations
no
protein binding
2020-10-02
2021-03-10
x-ray diffraction
2.3
0.232
0.183
33636101
10.1016/j.str.2021.02.001
0
auth_asym_id
VHVL
N.A.
N.A.
B
N.A.
MEVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLTACDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKGSHHHHHH
N.A.
MEVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLTACDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKGSHH
N.A.
26.511183
0
241
0
235
0
237
0
0
single-chain fv
N.A.
homo sapiens
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
7kbp_C
7kbp
herceptin diabody with r83t, e85c mutations
no
protein binding
2020-10-02
2021-03-10
x-ray diffraction
2.3
0.232
0.183
33636101
10.1016/j.str.2021.02.001
0
auth_asym_id
VHVL
N.A.
N.A.
C
N.A.
MEVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLTACDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKGSHHHHHH
N.A.
EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLTACDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIK
N.A.
26.684948
0
241
0
230
0
232
0
0
single-chain fv
N.A.
homo sapiens
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
7kbp_D
7kbp
herceptin diabody with r83t, e85c mutations
no
protein binding
2020-10-02
2021-03-10
x-ray diffraction
2.3
0.232
0.183
33636101
10.1016/j.str.2021.02.001
0
auth_asym_id
VHVL
N.A.
N.A.
D
N.A.
MEVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLTACDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKGSHHHHHH
N.A.
MEVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLTACDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKGSHH
N.A.
26.72578
0
241
0
233
0
237
0
0
single-chain fv
N.A.
homo sapiens
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
7kbk_C
7kbk
ricin bound to vhh antibody v6e11
no
toxin
2020-10-02
2021-08-04
x-ray diffraction
2.09
0.203
0.172
34089718
10.1016/j.jmb.2021.167086
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
QLQLAESGGGLVQAGGSLNLSCIASRRTLSTSFMAWFRQVPGKEREFVAALRSSDGRPYYGDSVKGRFTVSRDNANTVYLQMNSLKPEDTAIYYCALNRGYSGTGYPSKQYEYNDWGQGTQVTVSSEPKTPKPQ
N.A.
LQLAESGGGLVQAGGSLNLSCIASRRTLSTSFMAWFRQVPGKEREFVAALRSSDGRPYYGDSVKGRFTVSRDNANTVYLQMNSLKPEDTAIYYCALNRGYSGTGYPSKQYEYNDWGQGTQVTVSS
N.A.
13.743097
0
134
0
124
0
125
0
0
vhh antibody v6e11
N.A.
vicugna pacos
N.A.
A;B
protein;protein
ricin;ricin
ricinus communis;ricinus communis
22;10
10;5
0.91;0.83
H_only
train
7d77_S
7d77
cryo-em structure of the cortisol-bound adhesion receptor gpr97-go complex
no
membrane protein
2020-10-03
2021-02-03
electron microscopy
2.9
N.A.
N.A.
33408414
10.1038/s41586-020-03083-w
0
auth_asym_id
scFv
N.A.
N.A.
S
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKGS
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.422014
0
250
0
231
0
246
0
0
scfv16
N.A.
synthetic construct
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(o) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
32;24
20;10
0.91;0.83
H_only
train
7kc1_H_L
7kc1
cryo-em structure of srr2899884.46167h+medi8852l fab in complex with victoria ha
no
immune system
2020-10-04
2021-05-12
electron microscopy
3.41
N.A.
N.A.
34135892
10.3389/fimmu.2021.662909
0
auth_asym_id
VH:VL
IGHV6
IGKV1
H
L
QIQLQQSGPGLVKPSQTLSLTCSISGDTVTNNYAAWDWIRQSPTRGLEWLGRTFYRSKWYKEYALSVKSRLTISPDTSKNQISLQLSSVTPEDTAVYYCARAGITIFGLITGGLDYWGQGSLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
MTQSPSSLSASVGDRVTITCRTSQSLSSYTHWYQQKPGKAPKLLIYAASSRGSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
QIQLQQSGPGLVKPSQTLSLTCSISGDTVTNNYAAWDWIRQSPTRGLEWLGRTFYRSKWYKEYALSVKSRLTISPDTSKNQISLQLSSVTPEDTAVYYCARAGITIFGLITGGLDYWGQGSLVTV
MTQSPSSLSASVGDRVTITCRTSQSLSSYTHWYQQKPGKAPKLLIYAASSRGSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRTFGQGTKVEI
14.406533
12.579999
227
206
125
99
125
99
35
fab heavy chain
fab light chain
homo sapiens
homo sapiens
A;B
protein;protein
hemagglutinin;fusion protein of hemagglutinin and envelope glycoprotein
influenza a virus;influenza a virus
13;41
6;17
1.0;0.89
HL
train
7kc1_E_F
7kc1
cryo-em structure of srr2899884.46167h+medi8852l fab in complex with victoria ha
no
immune system
2020-10-04
2021-05-12
electron microscopy
3.41
N.A.
N.A.
34135892
10.3389/fimmu.2021.662909
0
auth_asym_id
VH:VL
IGHV6
IGKV1
E
F
QIQLQQSGPGLVKPSQTLSLTCSISGDTVTNNYAAWDWIRQSPTRGLEWLGRTFYRSKWYKEYALSVKSRLTISPDTSKNQISLQLSSVTPEDTAVYYCARAGITIFGLITGGLDYWGQGSLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
MTQSPSSLSASVGDRVTITCRTSQSLSSYTHWYQQKPGKAPKLLIYAASSRGSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
QIQLQQSGPGLVKPSQTLSLTCSISGDTVTNNYAAWDWIRQSPTRGLEWLGRTFYRSKWYKEYALSVKSRLTISPDTSKNQISLQLSSVTPEDTAVYYCARAGITIFGLITGGLDYWGQGSLVTV
MTQSPSSLSASVGDRVTITCRTSQSLSSYTHWYQQKPGKAPKLLIYAASSRGSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRTFGQGTKVEI
14.399896
12.581264
227
206
125
99
125
99
35
fab heavy chain
fab light chain
homo sapiens
homo sapiens
C;D
protein;protein
hemagglutinin;fusion protein of hemagglutinin and envelope glycoprotein
influenza a virus;influenza a virus
12;43
6;18
1.0;0.9
HL
train
7kc1_J_K
7kc1
cryo-em structure of srr2899884.46167h+medi8852l fab in complex with victoria ha
no
immune system
2020-10-04
2021-05-12
electron microscopy
3.41
N.A.
N.A.
34135892
10.3389/fimmu.2021.662909
0
auth_asym_id
VH:VL
IGHV6
IGKV1
J
K
QIQLQQSGPGLVKPSQTLSLTCSISGDTVTNNYAAWDWIRQSPTRGLEWLGRTFYRSKWYKEYALSVKSRLTISPDTSKNQISLQLSSVTPEDTAVYYCARAGITIFGLITGGLDYWGQGSLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
MTQSPSSLSASVGDRVTITCRTSQSLSSYTHWYQQKPGKAPKLLIYAASSRGSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
QIQLQQSGPGLVKPSQTLSLTCSISGDTVTNNYAAWDWIRQSPTRGLEWLGRTFYRSKWYKEYALSVKSRLTISPDTSKNQISLQLSSVTPEDTAVYYCARAGITIFGLITGGLDYWGQGSLVTV
MTQSPSSLSASVGDRVTITCRTSQSLSSYTHWYQQKPGKAPKLLIYAASSRGSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSRTFGQGTKVEI
14.402849
12.582535
227
206
125
99
125
99
36
fab heavy chain
fab light chain
homo sapiens
homo sapiens
G;I
protein;protein
hemagglutinin;fusion protein of hemagglutinin and envelope glycoprotein
influenza a virus;influenza a virus
12;43
6;18
1.0;0.9
HL
train
7d7m_E
7d7m
cryo-em structure of the prostaglandin e receptor ep4 coupled to g protein
yes
membrane protein
2020-10-05
2020-11-18
electron microscopy
3.3
N.A.
N.A.
33264604
10.1016/j.str.2020.11.007
0
auth_asym_id
VHH
IGHV3
N.A.
E
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSENLYFQ
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
13.824872
0
134
0
128
0
128
0
0
nanobody nb35
N.A.
lama glama
N.A.
B;D
protein;protein
guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(s) subunit alpha isoforms short,guanine nucleotide-binding protein g(s) subunit alpha isoforms short,guanine nucleotide-binding protein g(s) subunit alpha isoforms short
homo sapiens;homo sapiens
33;49
11;14
0.65;0.58
H_only
train
7kcr_H_L
7kcr
cryo-em structure of zika virus in complex with e protein cross-linking human monoclonal antibody adi30056
no
virus/immune system
2020-10-07
2020-12-16
electron microscopy
4
N.A.
N.A.
33255202
10.3390/v12121346
0
auth_asym_id
VH:VL
IGHV3
IGKV1
H
L
EVQLLESGGGVVQPGGSLRLSCTASGFTFRNFGIHWVRQAPGKRLEWVAFIRYDGRNKYYADSVKGRFISSRDNSKNMVYLDMKSLRPEDTAIYHCAADGEETSPGSFDYWGQGTLVTVSS
DIVMTQTPSSLAASVGDSVTITCRASESVSTVLNWYQHKPGKAPKLLIYAASTLPSGVPSRFSGSGSGTDFTLSISSLQPEDFAIYYCQQSYFSPRTFGGGTKVEIK
EVQLLESGGGVVQPGGSLRLSCTASGFTFRNFGIHWVRQAPGKRLEWVAFIRYDGRNKYYADSVKGRFISSRDNSKNMVYLDMKSLRPEDTAIYHCAADGEETSPGSFDYWGQGTLVTVSS
DIVMTQTPSSLAASVGDSVTITCRASESVSTVLNWYQHKPGKAPKLLIYAASTLPSGVPSRFSGSGSGTDFTLSISSLQPEDFAIYYCQQSYFSPRTFGGGTKVEIK
13.863608
13.175722
121
107
121
107
121
107
48
adi30056 fab heavy chain variable region
adi30056 fab light chain variable region
homo sapiens
homo sapiens
C
protein
envelope protein e
zika virus zikv/h. sapiens/frenchpolynesia/10087pf/2013
48
19
0.86
HL
train
7d85_B_C
7d85
crystal structure of anti-erbb3 fab isu104 in complex with human erbb3 extracellular domain 3
no
immune system
2020-10-07
2021-04-07
x-ray diffraction
2.5
0.258
0.203
33782100
10.1158/1535-7163.MCT-20-0907
0
auth_asym_id
FabH:FabL
IGHV3
IGLV1
B
C
EVQLLESGGGLVQPGGSLRLSCAASGFTFSDYDMSWVRQAPGKGLEWVSTIDLDSGSIYYADSVQGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDLHMGPEGPFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNSVSWYQQLPGTAPKLLIYSDNHRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCQGWDTSLSGHVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS
EVQLLESGGGLVQPGGSLRLSCAASGFTFSDYDMSWVRQAPGKGLEWVSTIDLDSGSIYYADSVQGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDLHMGPEGPFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
SVLTQPPSASGTPGQRVTISCSGSSSNIGSNSVSWYQQLPGTAPKLLIYSDNHRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCQGWDTSLSGHVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTE
21.294014
23.164669
228
216
218
213
222
213
92
anti-erbb3 fab heavy chain
anti-erbb3 fab light chain
homo sapiens
homo sapiens
A
protein
receptor tyrosine-protein kinase erbb-3
homo sapiens
47
18
0.78
HL
train
7d85_E_F
7d85
crystal structure of anti-erbb3 fab isu104 in complex with human erbb3 extracellular domain 3
no
immune system
2020-10-07
2021-04-07
x-ray diffraction
2.5
0.258
0.203
33782100
10.1158/1535-7163.MCT-20-0907
0
auth_asym_id
FabH:FabL
IGHV3
IGLV1
E
F
EVQLLESGGGLVQPGGSLRLSCAASGFTFSDYDMSWVRQAPGKGLEWVSTIDLDSGSIYYADSVQGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDLHMGPEGPFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNSVSWYQQLPGTAPKLLIYSDNHRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCQGWDTSLSGHVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS
EVQLLESGGGLVQPGGSLRLSCAASGFTFSDYDMSWVRQAPGKGLEWVSTIDLDSGSIYYADSVQGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDLHMGPEGPFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
SVLTQPPSASGTPGQRVTISCSGSSSNIGSNSVSWYQQLPGTAPKLLIYSDNHRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCQGWDTSLSGHVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTE
21.252485
22.965948
228
216
217
213
222
213
95
anti-erbb3 fab heavy chain
anti-erbb3 fab light chain
homo sapiens
homo sapiens
D
protein
receptor tyrosine-protein kinase erbb-3
homo sapiens
52
19
0.7
HL
train
7kd0_C
7kd0
ricin bound to vhh antibody v2c11
no
toxin
2020-10-07
2021-08-04
x-ray diffraction
2.77
0.255
0.207
34089718
10.1016/j.jmb.2021.167086
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
AQVQLVESGGGLVQPGGSLRLSCVASGFTFSSTPMNWFRQAPGKEREFVAGVGSRNDIAYYADSVKGRFTVSRDDAKNTVYLQMNSLKPEDTGVYYCKRPAGRIEDELWGQGTQVTVSSEPKTPKPQ
N.A.
AQVQLVESGGGLVQPGGSLRLSCVASGFTFSSTPMNWFRQAPGKEREFVAGVGSRNDIAYYADSVKGRFTVSRDDAKNTVYLQMNSLKPEDTGVYYCKRPAGRIEDELWGQGTQVTV
N.A.
13.622279
0
127
0
117
0
117
0
0
anti-ron nanobody
N.A.
lama glama
N.A.
B
protein
ricin chain b
ricinus communis
41
11
0.5
H_only
train
7kd2_C
7kd2
ricin bound to vhh antibody v11b2
no
toxin
2020-10-07
2021-08-04
x-ray diffraction
2.55
0.28
0.227
34089718
10.1016/j.jmb.2021.167086
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
QVQLVETGGGLVQPGGSLKLSCAASGSISSPNVMGWYRQAPGKQRELVATMTSGGNTYSEDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNARDMWDRSHEYWGQGTQVTVSSEPKTPKPQ
N.A.
QVQLVETGGGLVQPGGSLKLSCAASGSISSPNVMGWYRQAPGKQRELVATMTSGGNTYSEDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNARDMWDRSHEYWGQGTQVTV
N.A.
13.729614
0
126
0
115
0
116
0
0
vhh antibody v11b2
N.A.
vicugna pacos
N.A.
A;B
protein;protein
ricin chain a;ricin chain b
ricinus communis;ricinus communis
12;40
6;11
1.0;0.55
H_only
train
7d8b_B
7d8b
engineering disulphide-free autonomous antibody vh domains to modulate intracellular pathways
no
rna binding protein
2020-10-07
2021-08-25
x-ray diffraction
2.46
0.292
0.25
35982046
10.1038/s41467-022-32463-1
0
auth_asym_id
VH
IGHV3
N.A.
B
N.A.
MSEVQLVESGGGLVQPGGSLRLSSAISGFSISSTSIDWVRQAPGKGLEWVARISPSSGSTSYADSVKGRFTISADTSKNTVYLQMNSLRAEDTAVYYTGRVAKALNSRSPSFVVNTYSSIGFDYRGQGTLVTVSSGAAEQKLISEEDLNGAAAFEHHHHHH
N.A.
SEVQLVESGGGLVQPGGSLRLSSAISGFSISSTSIDWVRQAPGKGLEWVARISPSSGSTSYADSVKGRFTISADTSKNTVYLQMNSLRAEDTAVYYTGRVAKALNSRSPSFVVNTYSSIGFDYRGQGTLVTVS
N.A.
13.833289
0
161
0
133
0
133
0
0
vh-s4
N.A.
homo sapiens
N.A.
A
protein
eukaryotic translation initiation factor 4e
homo sapiens
37
12
0.6
H_only
train
7d8b_D
7d8b
engineering disulphide-free autonomous antibody vh domains to modulate intracellular pathways
no
rna binding protein
2020-10-07
2021-08-25
x-ray diffraction
2.46
0.292
0.25
35982046
10.1038/s41467-022-32463-1
0
auth_asym_id
VH
IGHV3
N.A.
D
N.A.
MSEVQLVESGGGLVQPGGSLRLSSAISGFSISSTSIDWVRQAPGKGLEWVARISPSSGSTSYADSVKGRFTISADTSKNTVYLQMNSLRAEDTAVYYTGRVAKALNSRSPSFVVNTYSSIGFDYRGQGTLVTVSSGAAEQKLISEEDLNGAAAFEHHHHHH
N.A.
SEVQLVESGGGLVQPGGSLRLSSAISGFSISSTSIDWVRQAPGKGLEWVARISPSSGSTSYADSVKGRFTISADTSKNTVYLQMNSLRAEDTAVYYTGRVAKALNSRSPSFVVNTYSSIGFDYRGQGTLVTVS
N.A.
13.833699
0
161
0
133
0
133
0
0
vh-s4
N.A.
homo sapiens
N.A.
C
protein
eukaryotic translation initiation factor 4e
homo sapiens
37
14
0.67
H_only
train
7kde_S_T
7kde
bg505 sosip.664 in complex with the v3-targeting rhesus macaque antibody 1485 and human gp120-gp41 interface antibody 8anc195
yes
viral protein/immune system
2020-10-08
2020-10-28
electron microscopy
3.55
N.A.
N.A.
33084569
10.7554/eLife.61991
0
auth_asym_id
VH:VL
IGHV1
IGKV1
S
T
QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISVSA
DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEV
15.025875
13.341887
244
215
132
107
132
107
48
8anc195 fab heavy chain
8anc195 fab light chain
homo sapiens
homo sapiens
A;E
protein;protein
hiv-1 envelope glycoprotein bg505 sosip.664 gp41;envelope glycoprotein gp120
human immunodeficiency virus 1;human immunodeficiency virus 1
26;37
11;11
0.92;0.65
HL
train
7kde_O_P
7kde
bg505 sosip.664 in complex with the v3-targeting rhesus macaque antibody 1485 and human gp120-gp41 interface antibody 8anc195
yes
viral protein/immune system
2020-10-08
2020-10-28
electron microscopy
3.55
N.A.
N.A.
33084569
10.7554/eLife.61991
0
auth_asym_id
VH:VL
IGHV1
IGKV1
O
P
QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISVSA
DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEV
15.035997
13.346988
244
215
132
107
132
107
50
8anc195 fab heavy chain
8anc195 fab light chain
homo sapiens
homo sapiens
B;G
protein;protein
hiv-1 envelope glycoprotein bg505 sosip.664 gp41;envelope glycoprotein gp120
human immunodeficiency virus 1;human immunodeficiency virus 1
24;36
12;11
1.0;0.65
HL
train
7kde_Q_R
7kde
bg505 sosip.664 in complex with the v3-targeting rhesus macaque antibody 1485 and human gp120-gp41 interface antibody 8anc195
yes
viral protein/immune system
2020-10-08
2020-10-28
electron microscopy
3.55
N.A.
N.A.
33084569
10.7554/eLife.61991
0
auth_asym_id
VH:VL
IGHV1
IGKV1
Q
R
QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISVSA
DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEV
15.0362
13.326348
244
215
132
107
132
107
49
8anc195 fab heavy chain
8anc195 fab light chain
homo sapiens
homo sapiens
C;F
protein;protein
hiv-1 envelope glycoprotein bg505 sosip.664 gp41;envelope glycoprotein gp120
human immunodeficiency virus 1;human immunodeficiency virus 1
23;35
10;10
0.91;0.62
HL
train
7kde_M_N
7kde
bg505 sosip.664 in complex with the v3-targeting rhesus macaque antibody 1485 and human gp120-gp41 interface antibody 8anc195
yes
viral protein/immune system
2020-10-08
2020-10-28
electron microscopy
3.55
N.A.
N.A.
33084569
10.7554/eLife.61991
0
auth_asym_id
VH:VL
IGHV4
IGLV1
M
N
EVQLVESGPGLVKASETLSLTCTVSGYNIRSNNWWSWVRQPPGKGLEWIGGVYANSEITNYNSSLKSRVSISQDAWRNKFSLKLKSVTDADTAVYYCVRGPNHWEYFDSGNNEYFEFWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
QSALTQPPSVSGAPGQRVTISCTGTSSNIENYHAFWYQQFSGMAPKLLIRDNDKRPSGVSDRFSGSKSGASASLTITGLQTDDEADYYCQSYDSGLRSYIFASGTRLTVLGQPKASPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
EVQLVESGPGLVKASETLSLTCTVSGYNIRSNNWWSWVRQPPGKGLEWIGGVYANSEITNYNSSLKSRVSISQDAWRNKFSLKLKSVTDADTAVYYCVRGPNHWEYFDSGNNEYFEFWGQGALVTVSSA
SALTQPPSVSGAPGQRVTISCTGTSSNIENYHAFWYQQFSGMAPKLLIRDNDKRPSGVSDRFSGSKSGASASLTITGLQTDDEADYYCQSYDSGLRSYIFASGTRLTV
14.761641
13.420788
233
216
129
103
129
108
37
ab 1485 heavy chain
ab 1485 light chain
homo sapiens
homo sapiens
E
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
17
8
0.89
HL
train
7kde_J_I
7kde
bg505 sosip.664 in complex with the v3-targeting rhesus macaque antibody 1485 and human gp120-gp41 interface antibody 8anc195
yes
viral protein/immune system
2020-10-08
2020-10-28
electron microscopy
3.55
N.A.
N.A.
33084569
10.7554/eLife.61991
0
auth_asym_id
VH:VL
IGHV4
IGLV1
J
I
EVQLVESGPGLVKASETLSLTCTVSGYNIRSNNWWSWVRQPPGKGLEWIGGVYANSEITNYNSSLKSRVSISQDAWRNKFSLKLKSVTDADTAVYYCVRGPNHWEYFDSGNNEYFEFWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
QSALTQPPSVSGAPGQRVTISCTGTSSNIENYHAFWYQQFSGMAPKLLIRDNDKRPSGVSDRFSGSKSGASASLTITGLQTDDEADYYCQSYDSGLRSYIFASGTRLTVLGQPKASPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
EVQLVESGPGLVKASETLSLTCTVSGYNIRSNNWWSWVRQPPGKGLEWIGGVYANSEITNYNSSLKSRVSISQDAWRNKFSLKLKSVTDADTAVYYCVRGPNHWEYFDSGNNEYFEFWGQGALVTVSSA
SALTQPPSVSGAPGQRVTISCTGTSSNIENYHAFWYQQFSGMAPKLLIRDNDKRPSGVSDRFSGSKSGASASLTITGLQTDDEADYYCQSYDSGLRSYIFASGTRLTV
14.712434
13.400695
233
216
129
103
129
108
38
ab 1485 heavy chain
ab 1485 light chain
homo sapiens
homo sapiens
F
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
20
8
0.89
HL
train
7kde_H_L
7kde
bg505 sosip.664 in complex with the v3-targeting rhesus macaque antibody 1485 and human gp120-gp41 interface antibody 8anc195
yes
viral protein/immune system
2020-10-08
2020-10-28
electron microscopy
3.55
N.A.
N.A.
33084569
10.7554/eLife.61991
0
auth_asym_id
VH:VL
IGHV4
IGLV1
H
L
EVQLVESGPGLVKASETLSLTCTVSGYNIRSNNWWSWVRQPPGKGLEWIGGVYANSEITNYNSSLKSRVSISQDAWRNKFSLKLKSVTDADTAVYYCVRGPNHWEYFDSGNNEYFEFWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
QSALTQPPSVSGAPGQRVTISCTGTSSNIENYHAFWYQQFSGMAPKLLIRDNDKRPSGVSDRFSGSKSGASASLTITGLQTDDEADYYCQSYDSGLRSYIFASGTRLTVLGQPKASPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
EVQLVESGPGLVKASETLSLTCTVSGYNIRSNNWWSWVRQPPGKGLEWIGGVYANSEITNYNSSLKSRVSISQDAWRNKFSLKLKSVTDADTAVYYCVRGPNHWEYFDSGNNEYFEFWGQGALVTVSSA
SALTQPPSVSGAPGQRVTISCTGTSSNIENYHAFWYQQFSGMAPKLLIRDNDKRPSGVSDRFSGSKSGASASLTITGLQTDDEADYYCQSYDSGLRSYIFASGTRLTV
14.671352
13.425488
233
216
129
103
129
108
35
ab 1485 heavy chain
ab 1485 light chain
homo sapiens
homo sapiens
G
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
15
7
0.88
HL
train
7kdd_D_E
7kdd
hcmv postfusion gb in complex with sm5-1 fab
no
viral protein/immune system
2020-10-08
2021-03-17
electron microscopy
3.5
N.A.
N.A.
33674318
10.1126/sciadv.abf3178
0
auth_asym_id
VH:VL
IGHV1
IGLV1
D
E
QVQLVQSGAEVRKPGASVKVSCKASGYSLKDHYMVWVRQAPGQGLEWMGWINPQSGGTGYGQKFQGRVTMTRDTSTNTAYMILSSLRSDDTAVYFCARDGAKTVSNSGLSLLYYHNRLDAWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGGGGGAGGGGGHHHHHHGSWSHPQFEK
QSVLTQPPSVSAAPGQMVTISCSGSSSNIGKNYVSWYQQLPGAAPKLLIFDNNKRPSGTPDRFSGSKSGTSATLVITGLQTGDEADYYCGTPDRSLSVIFGGGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVQSGAEVRKPGASVKVSCKASGYSLKDHYMVWVRQAPGQGLEWMGWINPQSGGTGYGQKFQGRVTMTRDTSTNTAYMILSSLRSDDTAVYFCARDGAKTVSNSGLSLLYYHNRLDAWGQGTMVTVSS
QSVLTQPPSVSAAPGQMVTISCSGSSSNIGKNYVSWYQQLPGAAPKLLIFDNNKRPSGTPDRFSGSKSGTSATLVITGLQTGDEADYYCGTPDRSLSVIFGGGTKVTVLG
14.795757
13.560521
261
215
131
110
131
110
40
sm5-1 fab antibody heavy chain
sm5-1 fab antibody light chain
homo sapiens
homo sapiens
A
protein
envelope glycoprotein b
human cytomegalovirus (strain towne)
34
16
0.94
HL
train
7kdd_F_G
7kdd
hcmv postfusion gb in complex with sm5-1 fab
no
viral protein/immune system
2020-10-08
2021-03-17
electron microscopy
3.5
N.A.
N.A.
33674318
10.1126/sciadv.abf3178
0
auth_asym_id
VH:VL
IGHV1
IGLV1
F
G
QVQLVQSGAEVRKPGASVKVSCKASGYSLKDHYMVWVRQAPGQGLEWMGWINPQSGGTGYGQKFQGRVTMTRDTSTNTAYMILSSLRSDDTAVYFCARDGAKTVSNSGLSLLYYHNRLDAWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGGGGGAGGGGGHHHHHHGSWSHPQFEK
QSVLTQPPSVSAAPGQMVTISCSGSSSNIGKNYVSWYQQLPGAAPKLLIFDNNKRPSGTPDRFSGSKSGTSATLVITGLQTGDEADYYCGTPDRSLSVIFGGGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVQSGAEVRKPGASVKVSCKASGYSLKDHYMVWVRQAPGQGLEWMGWINPQSGGTGYGQKFQGRVTMTRDTSTNTAYMILSSLRSDDTAVYFCARDGAKTVSNSGLSLLYYHNRLDAWGQGTMVTVSS
QSVLTQPPSVSAAPGQMVTISCSGSSSNIGKNYVSWYQQLPGAAPKLLIFDNNKRPSGTPDRFSGSKSGTSATLVITGLQTGDEADYYCGTPDRSLSVIFGGGTKVTVLG
14.802444
13.558861
261
215
131
110
131
110
39
sm5-1 fab antibody heavy chain
sm5-1 fab antibody light chain
homo sapiens
homo sapiens
B
protein
envelope glycoprotein b
human cytomegalovirus (strain towne)
34
16
0.89
HL
train
7kdd_H_I
7kdd
hcmv postfusion gb in complex with sm5-1 fab
no
viral protein/immune system
2020-10-08
2021-03-17
electron microscopy
3.5
N.A.
N.A.
33674318
10.1126/sciadv.abf3178
0
auth_asym_id
VH:VL
IGHV1
IGLV1
H
I
QVQLVQSGAEVRKPGASVKVSCKASGYSLKDHYMVWVRQAPGQGLEWMGWINPQSGGTGYGQKFQGRVTMTRDTSTNTAYMILSSLRSDDTAVYFCARDGAKTVSNSGLSLLYYHNRLDAWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGGGGGAGGGGGHHHHHHGSWSHPQFEK
QSVLTQPPSVSAAPGQMVTISCSGSSSNIGKNYVSWYQQLPGAAPKLLIFDNNKRPSGTPDRFSGSKSGTSATLVITGLQTGDEADYYCGTPDRSLSVIFGGGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVQSGAEVRKPGASVKVSCKASGYSLKDHYMVWVRQAPGQGLEWMGWINPQSGGTGYGQKFQGRVTMTRDTSTNTAYMILSSLRSDDTAVYFCARDGAKTVSNSGLSLLYYHNRLDAWGQGTMVTVSS
QSVLTQPPSVSAAPGQMVTISCSGSSSNIGKNYVSWYQQLPGAAPKLLIFDNNKRPSGTPDRFSGSKSGTSATLVITGLQTGDEADYYCGTPDRSLSVIFGGGTKVTVLG
14.787402
13.54011
261
215
131
110
131
110
41
sm5-1 fab antibody heavy chain
sm5-1 fab antibody light chain
homo sapiens
homo sapiens
C
protein
envelope glycoprotein b
human cytomegalovirus (strain towne)
34
16
0.94
HL
train
7kdm_C
7kdm
ricin bound to vhh antibody v5g6
no
toxin
2020-10-08
2021-08-04
x-ray diffraction
2.3
0.238
0.187
34089718
10.1016/j.jmb.2021.167086
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
QVQLAESGGGLVQAGGSLRLSCAASGRTFSDYAMGWFRQAPGKERDFVAGITSSGGGTYYADSVKGRFTITRDNYKNTLYLQMDSLKPEDTAVYYCKGTADGSSSLGYLEVWGQGTLVTVSSEPKTPKPQ
N.A.
QLAESGGGLVQAGGSLRLSCAASGRTFSDYAMGWFRQAPGKERDFVAGITSSGGGTYYADSVKGRFTITRDNYKNTLYLQMDSLKPEDTAVYYCKGTADGSSSLGYLEVWGQGTLVTV
N.A.
13.566735
0
130
0
109
0
118
0
0
anti-ron nanobody
N.A.
lama glama
N.A.
A;B
protein;protein
ricin chain a;ricin chain b
ricinus communis;ricinus communis
12;46
6;11
0.86;0.42
H_only
train
7kdm_F
7kdm
ricin bound to vhh antibody v5g6
no
toxin
2020-10-08
2021-08-04
x-ray diffraction
2.3
0.238
0.187
34089718
10.1016/j.jmb.2021.167086
0
auth_asym_id
VHH
IGHV3
N.A.
F
N.A.
QVQLAESGGGLVQAGGSLRLSCAASGRTFSDYAMGWFRQAPGKERDFVAGITSSGGGTYYADSVKGRFTITRDNYKNTLYLQMDSLKPEDTAVYYCKGTADGSSSLGYLEVWGQGTLVTVSSEPKTPKPQ
N.A.
QLAESGGGLVQAGGSLRLSCAASGRTFSDYAMGWFRQAPGKERDFVAGITSSGGGTYYADSVKGRFTITRDNYKNTLYLQMDSLKPEDTAVYYCKGTADGSSSLGYLEVWGQGTLVTV
N.A.
13.553175
0
130
0
109
0
118
0
0
anti-ron nanobody
N.A.
lama glama
N.A.
D;E
protein;protein
ricin chain a;ricin chain b
ricinus communis;ricinus communis
13;46
6;11
0.75;0.41
H_only
train
7kd6_C_D
7kd6
insulin receptor l1-cr plus alphact fragment in co-complex with fv 83-7 and single-chain insulin sci-b
no
signaling protein
2020-10-08
2021-10-13
x-ray diffraction
2.6
0.221
0.189
36181268
10.1016/j.bpj.2022.09.038
0
auth_asym_id
VH:VL
IGHV4
IGKV4
C
D
AGSQVQLKESGPGLVAPSQSLSITCTVSGFPLTAYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARDPYGSKPMDYWGQGTSVTVSSSLVPR
AGSDIVMSQSPSSLVVSVGEKVTMSCKSSQSLLYSSNQKNFLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYFRYRTFGGGTKLEIKSSDYKD
SQVQLKESGPGLVAPSQSLSITCTVSGFPLTAYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARDPYGSKPMDYWGQGTSVTVSSSLVP
GSDIVMSQSPSSLVVSVGEKVTMSCKSSQSLLYSSNQKNFLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYFRYRTFGGGTKLEIKS
14.202436
13.945647
126
121
123
115
123
115
47
fv 83-7 heavy chain
fv 83-7 light chain
mus musculus
mus musculus
E
protein
insulin receptor subunit alpha
homo sapiens
38
17
0.85
HL
train
7kd6_I_J
7kd6
insulin receptor l1-cr plus alphact fragment in co-complex with fv 83-7 and single-chain insulin sci-b
no
signaling protein
2020-10-08
2021-10-13
x-ray diffraction
2.6
0.221
0.189
36181268
10.1016/j.bpj.2022.09.038
0
auth_asym_id
VH:VL
IGHV4
IGKV4
I
J
AGSQVQLKESGPGLVAPSQSLSITCTVSGFPLTAYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARDPYGSKPMDYWGQGTSVTVSSSLVPR
AGSDIVMSQSPSSLVVSVGEKVTMSCKSSQSLLYSSNQKNFLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYFRYRTFGGGTKLEIKSSDYKD
SQVQLKESGPGLVAPSQSLSITCTVSGFPLTAYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARDPYGSKPMDYWGQGTSVTVSSSLVP
GSDIVMSQSPSSLVVSVGEKVTMSCKSSQSLLYSSNQKNFLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYFRYRTFGGGTKLEIKS
14.056383
13.938581
126
121
123
115
123
115
46
fv 83-7 heavy chain
fv 83-7 light chain
mus musculus
mus musculus
K
protein
insulin receptor subunit alpha
homo sapiens
38
17
0.85
HL
train
7kd6_O_P
7kd6
insulin receptor l1-cr plus alphact fragment in co-complex with fv 83-7 and single-chain insulin sci-b
no
signaling protein
2020-10-08
2021-10-13
x-ray diffraction
2.6
0.221
0.189
36181268
10.1016/j.bpj.2022.09.038
0
auth_asym_id
VH:VL
IGHV4
IGKV4
O
P
AGSQVQLKESGPGLVAPSQSLSITCTVSGFPLTAYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARDPYGSKPMDYWGQGTSVTVSSSLVPR
AGSDIVMSQSPSSLVVSVGEKVTMSCKSSQSLLYSSNQKNFLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYFRYRTFGGGTKLEIKSSDYKD
SQVQLKESGPGLVAPSQSLSITCTVSGFPLTAYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARDPYGSKPMDYWGQGTSVTVSSSLVPR
AGSDIVMSQSPSSLVVSVGEKVTMSCKSSQSLLYSSNQKNFLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYFRYRTFGGGTKLEIK
14.429503
13.954239
126
121
124
115
124
115
47
fv 83-7 heavy chain
fv 83-7 light chain
mus musculus
mus musculus
Q
protein
insulin receptor subunit alpha
homo sapiens
37
17
0.85
HL
train
7kd6_U_V
7kd6
insulin receptor l1-cr plus alphact fragment in co-complex with fv 83-7 and single-chain insulin sci-b
no
signaling protein
2020-10-08
2021-10-13
x-ray diffraction
2.6
0.221
0.189
36181268
10.1016/j.bpj.2022.09.038
0
auth_asym_id
VH:VL
IGHV4
IGKV4
U
V
AGSQVQLKESGPGLVAPSQSLSITCTVSGFPLTAYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARDPYGSKPMDYWGQGTSVTVSSSLVPR
AGSDIVMSQSPSSLVVSVGEKVTMSCKSSQSLLYSSNQKNFLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYFRYRTFGGGTKLEIKSSDYKD
SQVQLKESGPGLVAPSQSLSITCTVSGFPLTAYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDTARYYCARDPYGSKPMDYWGQGTSVTVSS
GSDIVMSQSPSSLVVSVGEKVTMSCKSSQSLLYSSNQKNFLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYFRYRTFGGGTKLEIK
13.655509
13.858058
126
121
119
114
119
114
47
fv 83-7 heavy chain
fv 83-7 light chain
mus musculus
mus musculus
W
protein
insulin receptor subunit alpha
homo sapiens
42
18
0.82
HL
train
7ke1_A_B
7ke1
factor h enhancing human antibody fragment (fab) to meningococcal factor h binding protein
no
immune system
2020-10-09
2021-06-09
x-ray diffraction
1.5
0.183
0.162
34125873
10.1371/journal.ppat.1009655
0
auth_asym_id
FabH:FabL
IGHV3
IGKV3
A
B
QVQLVESGGGLVQPGGSLRLSCVTSGFTFRSYAMTWVRQAPGKGLEWVSSISHSGGSTKYADSVKGRLTISRDDSMDTLYLQMNSLRAEDTAIYYCAKDQISYPAASPLDYWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKLEHHHHHH
AEIVLTQSPGTLSLSPGERATLSCRASQSFSSFSLAWYQQKPGQAPRLLIYAPSNRATGIADRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKLYACEVTHQGLSSPVTKSFNRGECS
QVQLVESGGGLVQPGGSLRLSCVTSGFTFRSYAMTWVRQAPGKGLEWVSSISHSGGSTKYADSVKGRLTISRDDSMDTLYLQMNSLRAEDTAIYYCAKDQISYPAASPLDYWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
EIVLTQSPGTLSLSPGERATLSCRASQSFSSFSLAWYQQKPGQAPRLLIYAPSNRATGIADRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKLYACEVTHQGLSSPVTKSFNRGE
21.200474
23.111828
235
217
217
214
222
214
89
immunoglobulin gamma, heavy chain fd fragment
immunoglobulin gamma, kappa light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7ke1_C_D
7ke1
factor h enhancing human antibody fragment (fab) to meningococcal factor h binding protein
no
immune system
2020-10-09
2021-06-09
x-ray diffraction
1.5
0.183
0.162
34125873
10.1371/journal.ppat.1009655
0
auth_asym_id
FabH:FabL
IGHV3
IGKV3
C
D
QVQLVESGGGLVQPGGSLRLSCVTSGFTFRSYAMTWVRQAPGKGLEWVSSISHSGGSTKYADSVKGRLTISRDDSMDTLYLQMNSLRAEDTAIYYCAKDQISYPAASPLDYWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKLEHHHHHH
AEIVLTQSPGTLSLSPGERATLSCRASQSFSSFSLAWYQQKPGQAPRLLIYAPSNRATGIADRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKLYACEVTHQGLSSPVTKSFNRGECS
QVQLVESGGGLVQPGGSLRLSCVTSGFTFRSYAMTWVRQAPGKGLEWVSSISHSGGSTKYADSVKGRLTISRDDSMDTLYLQMNSLRAEDTAIYYCAKDQISYPAASPLDYWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
EIVLTQSPGTLSLSPGERATLSCRASQSFSSFSLAWYQQKPGQAPRLLIYAPSNRATGIADRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKLYACEVTHQGLSSPVTKSFNRGE
21.076988
23.168545
235
217
216
214
222
214
89
immunoglobulin gamma, heavy chain fd fragment
immunoglobulin gamma, kappa light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7kdu_C
7kdu
ricin bound to vhh antibody v5e4
no
toxin
2020-10-09
2021-08-04
x-ray diffraction
2.81
0.294
0.237
34089718
10.1016/j.jmb.2021.167086
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
NAQVQLVETGGGLVQAGGSLRLSCVASGGTFSSYAMGWFRQAPGKERDFVAGISLSGAGTYYQDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCKATGERGYGDQGYLEVWGRGTLVTVSSEPKTPKPQ
N.A.
NAQVQLVETGGGLVQAGGSLRLSCVASGGTFSSYAMGWFRQAPGKERDFVAGISLSGAGTYYQDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCKATGERGYGDQGYLEVWGRGTLVTVSSEPKT
N.A.
13.406974
0
133
0
98
0
129
0
0
vhh antibody v5e4
N.A.
vicugna pacos
N.A.
A;B
protein;protein
ricin chain a;ricin chain b
ricinus communis;ricinus communis
12;44
6;11
1.0;0.46
H_only
train
7kej_G_J
7kej
bdbv-289 bound to ebov gpdmuc makona
no
viral protein/immune system
2020-10-11
2021-06-23
electron microscopy
3.8
N.A.
N.A.
33852862
10.1016/j.celrep.2021.108984
0
auth_asym_id
VH:VL
IGHV1
IGLV3
G
J
MELGLRWVFLVAILEGVQCQVQLVQSGAEVKKPGSSVKVSCKASGATFGSDTVTWVRQAPGQGLEWMGGIIPFFGEANYAQRFQGRVTITADKSTNTAYMELSSLRSEDTAVYFCARQINEMATFGEIHYYTYMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
MGWSCIILFLVATATGVHGSELTQDPAVSVALGQTVRITCQGDSLRNYYASWYQQKPRQAPVLVFYGKNNRPSGIPDRFSGSSSGNTASLTISGAQAEDEADYYCNSRDSSSNHLVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC
VQLVQSGAEVKKPGSSVKVSCKASGATFGSDTVTWVRQAPGQGLEWMGGIIPFFGEANYAQRFQGRVTITADKSTNTAYMELSSLRSEDTAVYFCARQINEMATFGEIHYYTYMDVWGQGTLVTVSSAS
GSELTQDPAVSVALGQTVRITCQGDSLRNYYASWYQQKPRQAPVLVFYGKNNRPSGIPDRFSGSSSGNTASLTISGAQAEDEADYYCNSRDSSSNHLVFGGGTKLTVLSQ
15.731814
13.694193
251
231
129
110
129
110
48
antibody fab heavy chain (hc) bdbv-289
antibody fab light chain (lc) bdbv-289
homo sapiens
homo sapiens
A
protein
virion spike glycoprotein
ebola virus
57
25
0.89
HL
train
7kej_H_K
7kej
bdbv-289 bound to ebov gpdmuc makona
no
viral protein/immune system
2020-10-11
2021-06-23
electron microscopy
3.8
N.A.
N.A.
33852862
10.1016/j.celrep.2021.108984
0
auth_asym_id
VH:VL
IGHV1
IGLV3
H
K
MELGLRWVFLVAILEGVQCQVQLVQSGAEVKKPGSSVKVSCKASGATFGSDTVTWVRQAPGQGLEWMGGIIPFFGEANYAQRFQGRVTITADKSTNTAYMELSSLRSEDTAVYFCARQINEMATFGEIHYYTYMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
MGWSCIILFLVATATGVHGSELTQDPAVSVALGQTVRITCQGDSLRNYYASWYQQKPRQAPVLVFYGKNNRPSGIPDRFSGSSSGNTASLTISGAQAEDEADYYCNSRDSSSNHLVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC
VQLVQSGAEVKKPGSSVKVSCKASGATFGSDTVTWVRQAPGQGLEWMGGIIPFFGEANYAQRFQGRVTITADKSTNTAYMELSSLRSEDTAVYFCARQINEMATFGEIHYYTYMDVWGQGTLVTVSSAS
GSELTQDPAVSVALGQTVRITCQGDSLRNYYASWYQQKPRQAPVLVFYGKNNRPSGIPDRFSGSSSGNTASLTISGAQAEDEADYYCNSRDSSSNHLVFGGGTKLTVLSQ
15.731819
13.694193
251
231
129
110
129
110
48
antibody fab heavy chain (hc) bdbv-289
antibody fab light chain (lc) bdbv-289
homo sapiens
homo sapiens
B
protein
virion spike glycoprotein
ebola virus
57
25
0.89
HL
train
7kej_I_L
7kej
bdbv-289 bound to ebov gpdmuc makona
no
viral protein/immune system
2020-10-11
2021-06-23
electron microscopy
3.8
N.A.
N.A.
33852862
10.1016/j.celrep.2021.108984
0
auth_asym_id
VH:VL
IGHV1
IGLV3
I
L
MELGLRWVFLVAILEGVQCQVQLVQSGAEVKKPGSSVKVSCKASGATFGSDTVTWVRQAPGQGLEWMGGIIPFFGEANYAQRFQGRVTITADKSTNTAYMELSSLRSEDTAVYFCARQINEMATFGEIHYYTYMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
MGWSCIILFLVATATGVHGSELTQDPAVSVALGQTVRITCQGDSLRNYYASWYQQKPRQAPVLVFYGKNNRPSGIPDRFSGSSSGNTASLTISGAQAEDEADYYCNSRDSSSNHLVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC
VQLVQSGAEVKKPGSSVKVSCKASGATFGSDTVTWVRQAPGQGLEWMGGIIPFFGEANYAQRFQGRVTITADKSTNTAYMELSSLRSEDTAVYFCARQINEMATFGEIHYYTYMDVWGQGTLVTVSSAS
GSELTQDPAVSVALGQTVRITCQGDSLRNYYASWYQQKPRQAPVLVFYGKNNRPSGIPDRFSGSSSGNTASLTISGAQAEDEADYYCNSRDSSSNHLVFGGGTKLTVLSQ
15.731817
13.69419
251
231
129
110
129
110
48
antibody fab heavy chain (hc) bdbv-289
antibody fab light chain (lc) bdbv-289
homo sapiens
homo sapiens
C
protein
virion spike glycoprotein
ebola virus
57
25
0.89
HL
train
7keo_A_B
7keo
crystal structure of k29-linked di-ubiquitin in complex with synthetic antigen binding fragment
no
protein binding
2020-10-11
2021-07-28
x-ray diffraction
2.9
0.282
0.236
34239127
10.1038/s41589-021-00823-5
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
A
B
EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVASIYSYYGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYGFAGQPETWYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQAYVEPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVASIYSYYGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYGFAGQPETWYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQAYVEPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
22.122095
23.058945
235
215
227
214
227
214
116
synthetic antigen binding fragment, heavy chain
synthetic antigen binding fragment, light chain
homo sapiens
homo sapiens
C;D
protein;protein
ubiquitin;ubiquitin
homo sapiens;homo sapiens
23;35
9;18
0.82;1.0
HL
train
7keo_E_F
7keo
crystal structure of k29-linked di-ubiquitin in complex with synthetic antigen binding fragment
no
protein binding
2020-10-11
2021-07-28
x-ray diffraction
2.9
0.282
0.236
34239127
10.1038/s41589-021-00823-5
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
E
F
EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVASIYSYYGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYGFAGQPETWYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQAYVEPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLVESGGGLVQPGGSLRLSCAASGFNVSYSSIHWVRQAPGKGLEWVASIYSYYGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYGFAGQPETWYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQAYVEPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
21.87979
23.093842
235
215
225
214
225
214
114
synthetic antigen binding fragment, heavy chain
synthetic antigen binding fragment, light chain
homo sapiens
homo sapiens
G;H
protein;protein
ubiquitin;ubiquitin
homo sapiens;homo sapiens
24;40
8;21
0.73;1.0
HL
train
7ket_A_B
7ket
factor h enhancing human antibody fragment (fab) to meningococcal factor h binding protein
no
immune system
2020-10-12
2021-06-09
x-ray diffraction
2
0.281
0.234
34125873
10.1371/journal.ppat.1009655
0
auth_asym_id
FabH:FabL
IGHV3
IGKV3
A
B
QVQLVESGGGLVQPGGSLRLSCVTSGFTFRSYAMTWVRQAPGKGLEWVSSISHSGGSTKYADSVKGRLTISRDDSMDTLYLQMNSLRAEDTAIYYCAKDQISYPAASPLDYWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKLEHHHHHH
AEIVLTQSPGTLSLSPGERATLSCRASQSFSSFSLAWYQQKPGQAPRLLIYAPSNRATGIADRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKLYACEVTHQGLSSPVTKSFNRGECS
QVQLVESGGGLVQPGGSLRLSCVTSGFTFRSYAMTWVRQAPGKGLEWVSSISHSGGSTKYADSVKGRLTISRDDSMDTLYLQMNSLRAEDTAIYYCAKDQISYPAASPLDYWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
IVLTQSPGTLSLSPGERATLSCRASQSFSSFSLAWYQQKPGQAPRLLIYAPSNRATGIADRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKLYACEVTHQGLSSPVTKSFNRGEC
21.807413
22.651625
235
217
217
209
223
214
92
immunoglobulin gamma, heavy chain fd fragment
immunoglobulin gamma, kappa light chain
homo sapiens
homo sapiens
C
protein
factor h binding protein
neisseria meningitidis
49
19
0.83
HL
train
7anq_B
7anq
complete pcsk9 c-ter domain in complex with vhh p1.40
no
hydrolase
2020-10-12
2021-10-20
x-ray diffraction
2.2
0.256
0.213
36566984
10.1016/j.molmet.2022.101662
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
QVKLEESGGGLVQAGGSLRLSCSPSDRTFSAYAMGWFRQVPGREREFVATIRDSDASIYYTDSVKGRFTISRDNAKNTVYLQMNSLIPDDTAVYYCAARQYYSGRVYSTFREEYDYWGQGTQVTVSS
N.A.
QVKLEESGGGLVQAGGSLRLSCSPSDRTFSAYAMGWFRQVPGREREFVATIRDSDASIYYTDSVKGRFTISRDNAKNTVYLQMNSLIPDDTAVYYCAARQYYSGRVYSTFREEYDYWGQGTQVTVSS
N.A.
13.85703
0
127
0
127
0
127
0
0
vhh p1.40 minibody anti-cter pcsk9
N.A.
lama glama
N.A.
A
protein
proprotein convertase subtilisin/kexin type 9
homo sapiens
45
5
0.28
H_only
train
7kew_G_J
7kew
bundibugyo virus gp (mucin deleted) bound to antibody fab bdbv-43
no
viral protein/immune system
2020-10-13
2021-04-28
electron microscopy
4.16
N.A.
N.A.
33852862
10.1016/j.celrep.2021.108984
0
auth_asym_id
VH:VL
IGHV1
IGKV3
G
J
MELGLRWVFLVAILEGVQCQVQLVQSGAEVKKPGSSVKVSCRASGDSFSRKYGISWVRQAPGQGFEWMGTIMPIVGLTTSAQKFQGRVTITADKSTSTAHMELNSLTSEDTAIYYCARDEIIGARPHWFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
MGWSCIILFLVATATGVHEIVMTQSPAIMSVSPGKRATLSCRASQSVSSNLAWYQRKPGQAPRLLIYGSSTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCLQYYNWPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAEVKKPGSSVKVSCRASGDSFSRKYGISWVRQAPGQGFEWMGTIMPIVGLTTSAQKFQGRVTITADKSTSTAHMELNSLTSEDTAIYYCARDEIIGARPHWFDSWGQGTLVTVS
EIVMTQSPAIMSVSPGKRATLSCRASQSVSSNLAWYQRKPGQAPRLLIYGSSTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCLQYYNWPRTFGQGTKVEI
13.82885
12.997515
246
232
122
106
122
106
48
bdbv-43 fab heavy chain
bdbv-43 fab light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein 1
bundibugyo ebolavirus
44
18
0.78
HL
train
7kew_H_K
7kew
bundibugyo virus gp (mucin deleted) bound to antibody fab bdbv-43
no
viral protein/immune system
2020-10-13
2021-04-28
electron microscopy
4.16
N.A.
N.A.
33852862
10.1016/j.celrep.2021.108984
0
auth_asym_id
VH:VL
IGHV1
IGKV3
H
K
MELGLRWVFLVAILEGVQCQVQLVQSGAEVKKPGSSVKVSCRASGDSFSRKYGISWVRQAPGQGFEWMGTIMPIVGLTTSAQKFQGRVTITADKSTSTAHMELNSLTSEDTAIYYCARDEIIGARPHWFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
MGWSCIILFLVATATGVHEIVMTQSPAIMSVSPGKRATLSCRASQSVSSNLAWYQRKPGQAPRLLIYGSSTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCLQYYNWPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAEVKKPGSSVKVSCRASGDSFSRKYGISWVRQAPGQGFEWMGTIMPIVGLTTSAQKFQGRVTITADKSTSTAHMELNSLTSEDTAIYYCARDEIIGARPHWFDSWGQGTLVTVS
EIVMTQSPAIMSVSPGKRATLSCRASQSVSSNLAWYQRKPGQAPRLLIYGSSTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCLQYYNWPRTFGQGTKVEI
13.828869
12.997533
246
232
122
106
122
106
48
bdbv-43 fab heavy chain
bdbv-43 fab light chain
homo sapiens
homo sapiens
B
protein
spike glycoprotein 1
bundibugyo ebolavirus
44
18
0.78
HL
train
7kew_I_L
7kew
bundibugyo virus gp (mucin deleted) bound to antibody fab bdbv-43
no
viral protein/immune system
2020-10-13
2021-04-28
electron microscopy
4.16
N.A.
N.A.
33852862
10.1016/j.celrep.2021.108984
0
auth_asym_id
VH:VL
IGHV1
IGKV3
I
L
MELGLRWVFLVAILEGVQCQVQLVQSGAEVKKPGSSVKVSCRASGDSFSRKYGISWVRQAPGQGFEWMGTIMPIVGLTTSAQKFQGRVTITADKSTSTAHMELNSLTSEDTAIYYCARDEIIGARPHWFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
MGWSCIILFLVATATGVHEIVMTQSPAIMSVSPGKRATLSCRASQSVSSNLAWYQRKPGQAPRLLIYGSSTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCLQYYNWPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAEVKKPGSSVKVSCRASGDSFSRKYGISWVRQAPGQGFEWMGTIMPIVGLTTSAQKFQGRVTITADKSTSTAHMELNSLTSEDTAIYYCARDEIIGARPHWFDSWGQGTLVTVS
EIVMTQSPAIMSVSPGKRATLSCRASQSVSSNLAWYQRKPGQAPRLLIYGSSTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCLQYYNWPRTFGQGTKVEI
13.828857
12.997487
246
232
122
106
122
106
48
bdbv-43 fab heavy chain
bdbv-43 fab light chain
homo sapiens
homo sapiens
C
protein
spike glycoprotein 1
bundibugyo ebolavirus
44
18
0.78
HL
train
7kf9_G_J
7kf9
ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-296 and ebov-515
no
viral protein/immune system
2020-10-13
2021-04-28
electron microscopy
4.4
N.A.
N.A.
33852862
10.1016/j.celrep.2021.108984
0
auth_asym_id
VH:VL
IGHV4
IGLV1
G
J
MELGLRWVFLVAILEGVQCQVQLVESGPGLVKPSQTLSLICTVSGGSISSGDFYWSWIRQPPGKGLEWIGFFYYSGITYYNPSLKSRVSISRDTSTNQFSLKLRSVTAADTAVYYCARVRGGRITLGQGDMYYYSGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
MGWSCIILFLVATATGVHQSVLTQPPSASGTPGQRVSISCSGSRSNIGGNTVDWYQQLPGTDPKLLIYSNDQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGHWVFGGGTKLTVLQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVESGPGLVKPSQTLSLICTVSGGSISSGDFYWSWIRQPPGKGLEWIGFFYYSGITYYNPSLKSRVSISRDTSTNQFSLKLRSVTAADTAVYYCARVRGGRITLGQGDMYYYSGMDVWGQGTLVTVSS
SVLTQPPSASGTPGQRVSISCSGSRSNIGGNTVDWYQQLPGTDPKLLIYSNDQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGHWVFGGGTKLTVL
14.465996
13.189534
254
234
131
110
131
110
43
antibody fab ebov-296 heavy chain
antibody fab ebov-296 light chain
homo sapiens
homo sapiens
A
protein
virion spike glycoprotein 1
ebola virus
54
26
0.84
HL
train
7kf9_H_K
7kf9
ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-296 and ebov-515
no
viral protein/immune system
2020-10-13
2021-04-28
electron microscopy
4.4
N.A.
N.A.
33852862
10.1016/j.celrep.2021.108984
0
auth_asym_id
VH:VL
IGHV4
IGLV1
H
K
MELGLRWVFLVAILEGVQCQVQLVESGPGLVKPSQTLSLICTVSGGSISSGDFYWSWIRQPPGKGLEWIGFFYYSGITYYNPSLKSRVSISRDTSTNQFSLKLRSVTAADTAVYYCARVRGGRITLGQGDMYYYSGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
MGWSCIILFLVATATGVHQSVLTQPPSASGTPGQRVSISCSGSRSNIGGNTVDWYQQLPGTDPKLLIYSNDQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGHWVFGGGTKLTVLQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVESGPGLVKPSQTLSLICTVSGGSISSGDFYWSWIRQPPGKGLEWIGFFYYSGITYYNPSLKSRVSISRDTSTNQFSLKLRSVTAADTAVYYCARVRGGRITLGQGDMYYYSGMDVWGQGTLVTVSS
SVLTQPPSASGTPGQRVSISCSGSRSNIGGNTVDWYQQLPGTDPKLLIYSNDQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGHWVFGGGTKLTVL
14.465975
13.189543
254
234
131
110
131
110
43
antibody fab ebov-296 heavy chain
antibody fab ebov-296 light chain
homo sapiens
homo sapiens
B
protein
virion spike glycoprotein 1
ebola virus
54
26
0.84
HL
train
7kf9_I_L
7kf9
ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-296 and ebov-515
no
viral protein/immune system
2020-10-13
2021-04-28
electron microscopy
4.4
N.A.
N.A.
33852862
10.1016/j.celrep.2021.108984
0
auth_asym_id
VH:VL
IGHV4
IGLV1
I
L
MELGLRWVFLVAILEGVQCQVQLVESGPGLVKPSQTLSLICTVSGGSISSGDFYWSWIRQPPGKGLEWIGFFYYSGITYYNPSLKSRVSISRDTSTNQFSLKLRSVTAADTAVYYCARVRGGRITLGQGDMYYYSGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
MGWSCIILFLVATATGVHQSVLTQPPSASGTPGQRVSISCSGSRSNIGGNTVDWYQQLPGTDPKLLIYSNDQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGHWVFGGGTKLTVLQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVESGPGLVKPSQTLSLICTVSGGSISSGDFYWSWIRQPPGKGLEWIGFFYYSGITYYNPSLKSRVSISRDTSTNQFSLKLRSVTAADTAVYYCARVRGGRITLGQGDMYYYSGMDVWGQGTLVTVSS
SVLTQPPSASGTPGQRVSISCSGSRSNIGGNTVDWYQQLPGTDPKLLIYSNDQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNGHWVFGGGTKLTVL
14.465974
13.189537
254
234
131
110
131
110
43
antibody fab ebov-296 heavy chain
antibody fab ebov-296 light chain
homo sapiens
homo sapiens
C
protein
virion spike glycoprotein 1
ebola virus
54
26
0.84
HL
train
7kfb_G_J
7kfb
ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-442
no
viral protein/immune system
2020-10-13
2021-04-28
electron microscopy
3.9
N.A.
N.A.
33852862
10.1016/j.celrep.2021.108984
0
auth_asym_id
VH:VL
IGHV3
IGKV3
G
J
EVQLVESGGGLVKPGGSLRLSCTGSGGTGFTFKYAGMSWVRQAPGKGPEWIGRIKSRIDGGTTDYAAPVKDRFIVSRDDSRNTLYLQMNSLKTEDTAVYYCATGSGKGPSASFGESYYYYDFINVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
ESVLTQSPGTLSLSPGERATLSCRASQSISRKYLAWYQQKPGQAPRLLIYGSSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCHQYESSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC
EVQLVESGGGLVKPGGSLRLSCTGSGGTGFTFKYAGMSWVRQAPGKGPEWIGRIKSRIDGGTTDYAAPVKDRFIVSRDDSRNTLYLQMNSLKTEDTAVYYCATGSGKGPSASFGESYYYYDFINVWGKGTTVTVSS
ESVLTQSPGTLSLSPGERATLSCRASQSISRKYLAWYQQKPGQAPRLLIYGSSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCHQYESSPWTFGQGTKVEI
15.370915
13.097326
240
215
136
107
136
107
40
antibody fab ebov-442 heavy chain
antibody fab ebov-442 light chain
homo sapiens
homo sapiens
A
protein
virion spike glycoprotein 1
ebola virus
47
20
0.91
HL
train
7kfb_H_K
7kfb
ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-442
no
viral protein/immune system
2020-10-13
2021-04-28
electron microscopy
3.9
N.A.
N.A.
33852862
10.1016/j.celrep.2021.108984
0
auth_asym_id
VH:VL
IGHV3
IGKV3
H
K
EVQLVESGGGLVKPGGSLRLSCTGSGGTGFTFKYAGMSWVRQAPGKGPEWIGRIKSRIDGGTTDYAAPVKDRFIVSRDDSRNTLYLQMNSLKTEDTAVYYCATGSGKGPSASFGESYYYYDFINVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
ESVLTQSPGTLSLSPGERATLSCRASQSISRKYLAWYQQKPGQAPRLLIYGSSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCHQYESSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC
EVQLVESGGGLVKPGGSLRLSCTGSGGTGFTFKYAGMSWVRQAPGKGPEWIGRIKSRIDGGTTDYAAPVKDRFIVSRDDSRNTLYLQMNSLKTEDTAVYYCATGSGKGPSASFGESYYYYDFINVWGKGTTVTVSS
ESVLTQSPGTLSLSPGERATLSCRASQSISRKYLAWYQQKPGQAPRLLIYGSSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCHQYESSPWTFGQGTKVEI
15.370816
13.0973
240
215
136
107
136
107
40
antibody fab ebov-442 heavy chain
antibody fab ebov-442 light chain
homo sapiens
homo sapiens
B
protein
virion spike glycoprotein 1
ebola virus
47
20
0.91
HL
train
7kfb_I_L
7kfb
ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-442
no
viral protein/immune system
2020-10-13
2021-04-28
electron microscopy
3.9
N.A.
N.A.
33852862
10.1016/j.celrep.2021.108984
0
auth_asym_id
VH:VL
IGHV3
IGKV3
I
L
EVQLVESGGGLVKPGGSLRLSCTGSGGTGFTFKYAGMSWVRQAPGKGPEWIGRIKSRIDGGTTDYAAPVKDRFIVSRDDSRNTLYLQMNSLKTEDTAVYYCATGSGKGPSASFGESYYYYDFINVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
ESVLTQSPGTLSLSPGERATLSCRASQSISRKYLAWYQQKPGQAPRLLIYGSSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCHQYESSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC
EVQLVESGGGLVKPGGSLRLSCTGSGGTGFTFKYAGMSWVRQAPGKGPEWIGRIKSRIDGGTTDYAAPVKDRFIVSRDDSRNTLYLQMNSLKTEDTAVYYCATGSGKGPSASFGESYYYYDFINVWGKGTTVTVSS
ESVLTQSPGTLSLSPGERATLSCRASQSISRKYLAWYQQKPGQAPRLLIYGSSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCHQYESSPWTFGQGTKVEI
15.37086
13.09738
240
215
136
107
136
107
40
antibody fab ebov-442 heavy chain
antibody fab ebov-442 light chain
homo sapiens
homo sapiens
C
protein
virion spike glycoprotein 1
ebola virus
47
20
0.91
HL
train
7kfe_G_I
7kfe
bundibugyo virus gp (mucin deleted) bound to antibody fab bdbv-329
no
viral protein/immune system
2020-10-13
2021-04-28
electron microscopy
6.6
N.A.
N.A.
33852862
10.1016/j.celrep.2021.108984
0
auth_asym_id
VH:VL
IGHV1
IGKV3
G
I
QVQLVQSGAEVKKPGSSVKVSCKASGGTFDTYAISWVRQAPGQGLEWMGGIIPVLGIVDYAQKFQGRVTITAAKFTNIAYMELSSLRSEDAAVYYCARGLRSLSPRGQEGPTPAPGWRRAQYHYYYMDVWGTGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
EIVMTQSPGTLSLSPGERATLSCRASQSVSSNYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGPDFTLTISRLEPEDFAVYYCQQYGSSPGTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC
QVQLVQSGAEVKKPGSSVKVSCKASGGTFDTYAISWVRQAPGQGLEWMGGIIPVLGIVDYAQKFQGRVTITAAKFTNIAYMELSSLRSEDAAVYYCARGLRSLSPRGQEGPTPAPGWRRAQYHYYYMDVWGTGTLVTVSS
EIVMTQSPGTLSLSPGERATLSCRASQSVSSNYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGPDFTLTISRLEPEDFAVYYCQQYGSSPGTFGGGTKVEIK
15.170376
12.901276
244
215
140
108
140
108
52
antibody bdbv-329 heavy chain
antibody bdbv-329 light chain
homo sapiens
homo sapiens
B
protein
spike glycoprotein 1
bundibugyo ebolavirus
50
22
0.88
HL
train
7kfe_H_J
7kfe
bundibugyo virus gp (mucin deleted) bound to antibody fab bdbv-329
no
viral protein/immune system
2020-10-13
2021-04-28
electron microscopy
6.6
N.A.
N.A.
33852862
10.1016/j.celrep.2021.108984
0
auth_asym_id
VH:VL
IGHV1
IGKV3
H
J
QVQLVQSGAEVKKPGSSVKVSCKASGGTFDTYAISWVRQAPGQGLEWMGGIIPVLGIVDYAQKFQGRVTITAAKFTNIAYMELSSLRSEDAAVYYCARGLRSLSPRGQEGPTPAPGWRRAQYHYYYMDVWGTGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
EIVMTQSPGTLSLSPGERATLSCRASQSVSSNYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGPDFTLTISRLEPEDFAVYYCQQYGSSPGTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC
QVQLVQSGAEVKKPGSSVKVSCKASGGTFDTYAISWVRQAPGQGLEWMGGIIPVLGIVDYAQKFQGRVTITAAKFTNIAYMELSSLRSEDAAVYYCARGLRSLSPRGQEGPTPAPGWRRAQYHYYYMDVWGTGTLVTVSS
EIVMTQSPGTLSLSPGERATLSCRASQSVSSNYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGPDFTLTISRLEPEDFAVYYCQQYGSSPGTFGGGTKVEIK
15.233375
12.935051
244
215
140
108
140
108
54
antibody bdbv-329 heavy chain
antibody bdbv-329 light chain
homo sapiens
homo sapiens
C
protein
spike glycoprotein 1
bundibugyo ebolavirus
43
20
0.91
HL
train
7kfg_A_B
7kfg
antibody fab bdbv-289
no
immune system
2020-10-13
2021-04-28
x-ray diffraction
3
0.268
0.221
33852862
10.1016/j.celrep.2021.108984
0
auth_asym_id
FabH:FabL
IGHV1
IGLV3
A
B
QVQLVQSGAEVKKPGSSVKVSCKASGATFGSDTVTWVRQAPGQGLEWMGGIIPFFGEANYAQRFQGRVTITADKSTNTAYMELSSLRSEDTAVYFCARQINEMATFGEIHYYTYMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
GSELTQDPAVSVALGQTVRITCQGDSLRNYYASWYQQKPRQAPVLVFYGKNNRPSGIPDRFSGSSSGNTASLTISGAQAEDEADYYCNSRDSSSNHLVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVQSGAEVKKPGSSVKVSCKASGATFGSDTVTWVRQAPGQGLEWMGGIIPFFGEANYAQRFQGRVTITADKSTNTAYMELSSLRSEDTAVYFCARQINEMATFGEIHYYTYMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
GSELTQDPAVSVALGQTVRITCQGDSLRNYYASWYQQKPRQAPVLVFYGKNNRPSGIPDRFSGSSSGNTASLTISGAQAEDEADYYCNSRDSSSNHLVFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
24.454887
22.719929
232
214
223
211
229
211
98
antibody fab bdbv-289 heavy chain
antibody fab bdbv-289 light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7kfh_G_J
7kfh
ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-437
no
viral protein/immune system
2020-10-13
2021-04-28
electron microscopy
3.8
N.A.
N.A.
33852862
10.1016/j.celrep.2021.108984
0
auth_asym_id
VH:VL
IGHV1
IGKV3
G
J
QVQLVQSGAEVKKPGSSVKVSCKASGGTFSRDIFSWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADKSTSTVFMELSGLRSEDTAVYFCARGPPLRGERSWFGESEKYDYFYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
QIVLTQSPGTLSLSPGERATLSCRASQSVSNSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSISRLEPEDFAVYYCQQYGTSPCTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC
QVQLVQSGAEVKKPGSSVKVSCKASGGTFSRDIFSWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADKSTSTVFMELSGLRSEDTAVYFCARGPPLRGERSWFGESEKYDYFYMDVWGKGTTVTVSS
QIVLTQSPGTLSLSPGERATLSCRASQSVSNSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSISRLEPEDFAVYYCQQYGTSPCTFGQGTKLEIK
16.013353
13.12022
237
215
133
108
133
108
36
antibody fab ebov-437 heavy chain
antibody fab ebov-437 light chain
homo sapiens
homo sapiens
A
protein
virion spike glycoprotein 1
ebola virus
53
20
0.8
HL
train
7kfh_H_K
7kfh
ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-437
no
viral protein/immune system
2020-10-13
2021-04-28
electron microscopy
3.8
N.A.
N.A.
33852862
10.1016/j.celrep.2021.108984
0
auth_asym_id
VH:VL
IGHV1
IGKV3
H
K
QVQLVQSGAEVKKPGSSVKVSCKASGGTFSRDIFSWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADKSTSTVFMELSGLRSEDTAVYFCARGPPLRGERSWFGESEKYDYFYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
QIVLTQSPGTLSLSPGERATLSCRASQSVSNSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSISRLEPEDFAVYYCQQYGTSPCTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC
QVQLVQSGAEVKKPGSSVKVSCKASGGTFSRDIFSWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADKSTSTVFMELSGLRSEDTAVYFCARGPPLRGERSWFGESEKYDYFYMDVWGKGTTVTVSS
QIVLTQSPGTLSLSPGERATLSCRASQSVSNSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSISRLEPEDFAVYYCQQYGTSPCTFGQGTKLEIK
16.013332
13.120261
237
215
133
108
133
108
36
antibody fab ebov-437 heavy chain
antibody fab ebov-437 light chain
homo sapiens
homo sapiens
B
protein
virion spike glycoprotein 1
ebola virus
53
20
0.8
HL
train
7kfh_I_L
7kfh
ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-437
no
viral protein/immune system
2020-10-13
2021-04-28
electron microscopy
3.8
N.A.
N.A.
33852862
10.1016/j.celrep.2021.108984
0
auth_asym_id
VH:VL
IGHV1
IGKV3
I
L
QVQLVQSGAEVKKPGSSVKVSCKASGGTFSRDIFSWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADKSTSTVFMELSGLRSEDTAVYFCARGPPLRGERSWFGESEKYDYFYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
QIVLTQSPGTLSLSPGERATLSCRASQSVSNSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSISRLEPEDFAVYYCQQYGTSPCTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC
QVQLVQSGAEVKKPGSSVKVSCKASGGTFSRDIFSWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADKSTSTVFMELSGLRSEDTAVYFCARGPPLRGERSWFGESEKYDYFYMDVWGKGTTVTVSS
QIVLTQSPGTLSLSPGERATLSCRASQSVSNSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSISRLEPEDFAVYYCQQYGTSPCTFGQGTKLEIK
16.01335
13.120239
237
215
133
108
133
108
36
antibody fab ebov-437 heavy chain
antibody fab ebov-437 light chain
homo sapiens
homo sapiens
C
protein
virion spike glycoprotein 1
ebola virus
53
20
0.8
HL
train
7kez_H_L
7kez
crystal structure of bh1 fab variant (cdr h3 loop design 16_0325) in complex with vegf
no
immune system
2020-10-13
2021-11-10
x-ray diffraction
2.31
0.235
0.178
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGGAVAGTGVYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTGHHHHHHHHG
DIQMTQSPSSLSASVGDRVTITCRASQDIPRSISGYVAWYQQKPGKAPKLLIYWGSYLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGGAVAGTGVYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQMTQSPSSLSASVGDRVTITCRASQDIPRSISGYVAWYQQKPGKAPKLLIYWGSYLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
21.256058
23.701834
239
218
220
216
224
216
92
anti-vegf-a fab bh1 heavy chain
anti-vegf-a fab bh1 light chain
homo sapiens
homo sapiens
V
protein
isoform l-vegf206 of vascular endothelial growth factor a
homo sapiens
37
20
0.87
HL
train
7kf1_A_B
7kf1
crystal structure of bh1 fab variant (cdr h3 loop design 14_0130) in complex with vegf
no
immune system
2020-10-13
2021-11-10
x-ray diffraction
2.45
0.232
0.189
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
A
B
EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAKLGIGYYYYGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTGHHHHHHHHG
DIQMTQSPSSLSASVGDRVTITCRASQDIPRSISGYVAWYQQKPGKAPKLLIYWGSYLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAKLGIGYYYYGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIQMTQSPSSLSASVGDRVTITCRASQDIPRSISGYVAWYQQKPGKAPKLLIYWGSYLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
21.060678
23.745913
237
218
215
216
221
216
94
anti-vegf-a fab bh1 heavy chain
anti-vegf-a fab bh1 light chain
homo sapiens
homo sapiens
C
protein
isoform l-vegf206 of vascular endothelial growth factor a
homo sapiens
34
17
0.85
HL
train
7kf1_D_E
7kf1
crystal structure of bh1 fab variant (cdr h3 loop design 14_0130) in complex with vegf
no
immune system
2020-10-13
2021-11-10
x-ray diffraction
2.45
0.232
0.189
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
D
E
EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAKLGIGYYYYGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTGHHHHHHHHG
DIQMTQSPSSLSASVGDRVTITCRASQDIPRSISGYVAWYQQKPGKAPKLLIYWGSYLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAKLGIGYYYYGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQMTQSPSSLSASVGDRVTITCRASQDIPRSISGYVAWYQQKPGKAPKLLIYWGSYLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
21.2471
23.791555
237
218
216
217
222
217
91
anti-vegf-a fab bh1 heavy chain
anti-vegf-a fab bh1 light chain
homo sapiens
homo sapiens
F
protein
isoform l-vegf206 of vascular endothelial growth factor a
homo sapiens
34
17
0.85
HL
train
7kf1_G_I
7kf1
crystal structure of bh1 fab variant (cdr h3 loop design 14_0130) in complex with vegf
no
immune system
2020-10-13
2021-11-10
x-ray diffraction
2.45
0.232
0.189
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
G
I
EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAKLGIGYYYYGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTGHHHHHHHHG
DIQMTQSPSSLSASVGDRVTITCRASQDIPRSISGYVAWYQQKPGKAPKLLIYWGSYLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAKLGIGYYYYGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQMTQSPSSLSASVGDRVTITCRASQDIPRSISGYVAWYQQKPGKAPKLLIYWGSYLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
21.090485
23.84128
237
218
217
217
222
217
91
anti-vegf-a fab bh1 heavy chain
anti-vegf-a fab bh1 light chain
homo sapiens
homo sapiens
J
protein
isoform l-vegf206 of vascular endothelial growth factor a
homo sapiens
34
17
0.85
HL
train
7kf1_H_L
7kf1
crystal structure of bh1 fab variant (cdr h3 loop design 14_0130) in complex with vegf
no
immune system
2020-10-13
2021-11-10
x-ray diffraction
2.45
0.232
0.189
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAKLGIGYYYYGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTGHHHHHHHHG
DIQMTQSPSSLSASVGDRVTITCRASQDIPRSISGYVAWYQQKPGKAPKLLIYWGSYLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCAKLGIGYYYYGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
DIQMTQSPSSLSASVGDRVTITCRASQDIPRSISGYVAWYQQKPGKAPKLLIYWGSYLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
21.814335
23.874968
237
218
225
217
225
217
102
anti-vegf-a fab bh1 heavy chain
anti-vegf-a fab bh1 light chain
homo sapiens
homo sapiens
V
protein
isoform l-vegf206 of vascular endothelial growth factor a
homo sapiens
35
17
0.85
HL
train
7d9z_H_L
7d9z
crystal structure of anti-basigin fab fragment
no
immune system
2020-10-14
2021-10-20
x-ray diffraction
1.12
0.15
0.121
34625749
10.1038/s41594-021-00665-8
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
QSVEESGGRLVTPGTPLTLTCTVSGFSLSDYAMSWVRQAPGKGLEWIGIIYASGSTYYASWAKGRFTISKTSTTVDLKITSPTTEDTATYFCARYYAGSDIWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
ADVVMTQTPSSVSAAVGGTVTINCQASQSISAYLAWYQQKPGQPPKLLIYDASDLASGVSSRFKGSGSGTQFTLTISDLECADAATYYCQTYYAIITYGAAFGGGTEVVVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDCTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SVEESGGRLVTPGTPLTLTCTVSGFSLSDYAMSWVRQAPGKGLEWIGIIYASGSTYYASWAKGRFTISKTSTTVDLKITSPTTEDTATYFCARYYAGSDIWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
ADVVMTQTPSSVSAAVGGTVTINCQASQSISAYLAWYQQKPGQPPKLLIYDASDLASGVSSRFKGSGSGTQFTLTISDLECADAATYYCQTYYAIITYGAAFGGGTEVVVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDCTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
20.633633
23.421518
217
218
207
217
213
217
97
heavy chain of antibody fab fragment
light chain of antibody fab fragment
oryctolagus cuniculus
oryctolagus cuniculus
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7kfv_H_L
7kfv
structural basis for a germline-biased antibody response to sars-cov-2 (rbd:c1a-b12 fab)
no
immune system/viral protein
2020-10-15
2020-12-02
x-ray diffraction
2.1
0.215
0.183
33200128
10.1101/2020.11.13.381533
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGATYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGDVSGYRYGLDYWGQGTLVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDR
DIQLTQSPSSLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQLISYPGTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGATYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGDVSGYRYGLDYWGQGTLVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDR
DIQLTQSPSSLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQLISYPGTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
21.507719
23.318817
225
214
225
214
225
214
101
heavy chain of antibody c1a-b12 fab
light chain of antibody c1a-b3 fab
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
68
24
0.71
HL
train
7kfv_C_D
7kfv
structural basis for a germline-biased antibody response to sars-cov-2 (rbd:c1a-b12 fab)
no
immune system/viral protein
2020-10-15
2020-12-02
x-ray diffraction
2.1
0.215
0.183
33200128
10.1101/2020.11.13.381533
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
C
D
EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGATYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGDVSGYRYGLDYWGQGTLVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDR
DIQLTQSPSSLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQLISYPGTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGATYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGDVSGYRYGLDYWGQGTLVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDR
DIQLTQSPSSLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQLISYPGTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
21.74606
23.288048
225
214
225
214
225
214
103
heavy chain of antibody c1a-b12 fab
light chain of antibody c1a-b3 fab
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
70
25
0.71
HL
train
7kfv_F_G
7kfv
structural basis for a germline-biased antibody response to sars-cov-2 (rbd:c1a-b12 fab)
no
immune system/viral protein
2020-10-15
2020-12-02
x-ray diffraction
2.1
0.215
0.183
33200128
10.1101/2020.11.13.381533
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
F
G
EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGATYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGDVSGYRYGLDYWGQGTLVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDR
DIQLTQSPSSLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQLISYPGTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGATYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGDVSGYRYGLDYWGQGTLVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS
DIQLTQSPSSLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQLISYPGTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
22.888594
22.51291
225
214
219
214
222
214
102
heavy chain of antibody c1a-b12 fab
light chain of antibody c1a-b3 fab
homo sapiens
homo sapiens
E
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
72
26
0.72
HL
train