Datasets:
RosettaCommons
/
SAAINTDB

Dataset card Data Studio Files
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1
PDB_ID_chain
stringlengths
6
10
PDB_ID
stringlengths
4
4
Title
stringlengths
4
230
Mutation(s)
stringclasses
2 values
Classification
stringclasses
305 values
Deposit_date
stringdate
1976-03-17 00:00:00
2026-01-20 00:00:00
Release_date
stringdate
1976-05-19 00:00:00
2026-02-25 00:00:00
Method
stringclasses
5 values
Resolution
stringclasses
459 values
R_free
stringclasses
227 values
R_work
stringclasses
211 values
PMID
stringlengths
4
8
DOI
stringlengths
4
68
Model_index
int64
0
76
Asym_ID_type
stringclasses
2 values
Ab_type
stringclasses
30 values
H_subgroup
stringclasses
8 values
L_subgroup
stringclasses
19 values
H_chain_ID
stringclasses
60 values
L_chain_ID
stringclasses
58 values
H_fas_seq
stringlengths
4
919
L_fas_seq
stringlengths
4
627
H_filled_pdb_seq
stringlengths
4
896
L_filled_pdb_seq
stringlengths
4
523
H_mean_radius
float64
0
79.7
L_mean_radius
float64
0
84.3
H_fas_seq_len
int64
0
919
L_fas_seq_len
int64
0
627
H_pdb_seq_len
int64
0
879
L_pdb_seq_len
int64
0
523
H_filled_seq_len
int64
0
896
L_filled_seq_len
int64
0
523
HL_inf_res_num
int64
0
175
H_mol_name
stringlengths
2
331
L_mol_name
stringlengths
2
151
H_species
stringclasses
68 values
L_species
stringclasses
42 values
Ag_chain_ID(s)
stringclasses
279 values
Ag_type(s)
stringclasses
16 values
Ag_mol_name(s)
stringlengths
2
390
Ag_species
stringclasses
743 values
Ab_ag_inf_res_num
stringlengths
1
11
CDR_inf_res_num
stringclasses
444 values
CDR_inf_res_ratio
stringlengths
1
19
hl_label
stringclasses
3 values
split
stringclasses
1 value
7mfr_Y_X
7mfr
crystal structure of a fab fragment bound to peptide ggm
no
immune system
2021-04-10
2021-06-16
x-ray diffraction
2.85
0.26
0.211
34326324
10.1038/s41467-021-24669-6
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
Y
X
QSVKESGGRLVTPGTPLTLTCKVSGFSLSSYYMNWVRQAPGKGLEWIGIMFPNGKIYYATWAKGRFTISKTSTTVDLKIISPTTEDTATYFCTGDDSGDVNIWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
DIVLTQTASPVSAAVGGTVTINCQSSQSVYTNNRLAWYQQKPGQPAKEMIYGASTLPSGVSSRFKGSGSGTQFALTISDVQADDAATYYCLGTYDCLSADCLAFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QSVKESGGRLVTPGTPLTLTCKVSGFSLSSYYMNWVRQAPGKGLEWIGIMFPNGKIYYATWAKGRFTISKTSTTVDLKIISPTTEDTATYFCTGDDSGDVNIWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIVLTQTASPVSAAVGGTVTINCQSSQSVYTNNRLAWYQQKPGQPAKEMIYGASTLPSGVSSRFKGSGSGTQFALTISDVQADDAATYYCLGTYDCLSADCLAFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
20.916891
23.473036
217
220
211
219
214
219
100
antibody fragment - heavy chain of fab
antibody fragment - light chain of fab
oryctolagus cuniculus
oryctolagus cuniculus
Q
peptide
gly-gly-met
homo sapiens
23
15
0.75
HL
train
7mfu_B
7mfu
crystal structure of synthetic nanobody (sb14+sb68) complexes with sars-cov-2 receptor binding domain
no
viral protein
2021-04-11
2021-06-02
x-ray diffraction
1.7
0.215
0.181
34537245
10.1016/j.jbc.2021.101202
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGFPVQAREMEWYRQAPGKEREWVAAIKSTGTYTAYAYSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCYVYVGSSYIGQGTQVTVSA
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGFPVQAREMEWYRQAPGKEREWVAAIKSTGTYTAYAYSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCYVYVGSSYIGQGTQVTVSA
N.A.
13.484098
0
115
0
115
0
115
0
0
synthetic nanobody #14 (sb14)
N.A.
synthetic construct
N.A.
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
60
9
0.29
H_only
train
7mfu_C
7mfu
crystal structure of synthetic nanobody (sb14+sb68) complexes with sars-cov-2 receptor binding domain
no
viral protein
2021-04-11
2021-06-02
x-ray diffraction
1.7
0.215
0.181
34537245
10.1016/j.jbc.2021.101202
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
SSQVQLVESGGGSVQAGGSLRLSCAASGSISSITYLGWFRQAPGKEREGVAALITVNGHTYYADSVKGRFTVSLDNAKNTVYLQMNSLKPEDTALYYCAAAAWGYAWPLHQDDYWYWGQGTQVTVSA
N.A.
SSQVQLVESGGGSVQAGGSLRLSCAASGSISSITYLGWFRQAPGKEREGVAALITVNGHTYYADSVKGRFTVSLDNAKNTVYLQMNSLKPEDTALYYCAAAAWGYAWPLHQDDYWYWGQGTQVTVSA
N.A.
13.576077
0
127
0
127
0
127
0
0
synthetic nanobody #68 (sb68)
N.A.
synthetic construct
N.A.
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
32
13
0.93
H_only
train
7mfu_E
7mfu
crystal structure of synthetic nanobody (sb14+sb68) complexes with sars-cov-2 receptor binding domain
no
viral protein
2021-04-11
2021-06-02
x-ray diffraction
1.7
0.215
0.181
34537245
10.1016/j.jbc.2021.101202
0
auth_asym_id
VHH
IGHV3
N.A.
E
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGFPVQAREMEWYRQAPGKEREWVAAIKSTGTYTAYAYSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCYVYVGSSYIGQGTQVTVSA
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGFPVQAREMEWYRQAPGKEREWVAAIKSTGTYTAYAYSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCYVYVGSSYIGQGTQVTVSA
N.A.
13.488919
0
115
0
115
0
115
0
0
synthetic nanobody #14 (sb14)
N.A.
synthetic construct
N.A.
D
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
62
9
0.3
H_only
train
7mfu_F
7mfu
crystal structure of synthetic nanobody (sb14+sb68) complexes with sars-cov-2 receptor binding domain
no
viral protein
2021-04-11
2021-06-02
x-ray diffraction
1.7
0.215
0.181
34537245
10.1016/j.jbc.2021.101202
0
auth_asym_id
VHH
IGHV3
N.A.
F
N.A.
SSQVQLVESGGGSVQAGGSLRLSCAASGSISSITYLGWFRQAPGKEREGVAALITVNGHTYYADSVKGRFTVSLDNAKNTVYLQMNSLKPEDTALYYCAAAAWGYAWPLHQDDYWYWGQGTQVTVSA
N.A.
SSQVQLVESGGGSVQAGGSLRLSCAASGSISSITYLGWFRQAPGKEREGVAALITVNGHTYYADSVKGRFTVSLDNAKNTVYLQMNSLKPEDTALYYCAAAAWGYAWPLHQDDYWYWGQGTQVTVSA
N.A.
13.590612
0
127
0
127
0
127
0
0
synthetic nanobody #68 (sb68)
N.A.
synthetic construct
N.A.
D
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
31
13
0.93
H_only
train
7mfv_B
7mfv
crystal structure of synthetic nanobody (sb16)
no
immune system
2021-04-11
2021-06-02
x-ray diffraction
1.9
0.251
0.237
34537245
10.1016/j.jbc.2021.101202
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGFPVAYKTMWWYRQAPGKEREWVAAIESYGIKWTRYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCIVWVGAQYHGQGTQVTVSA
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGFPVAYKTMWWYRQAPGKEREWVAAIESYGIKWTRYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCIVWVGAQYHGQGTQVTVSA
N.A.
13.565076
0
116
0
116
0
116
0
0
synthetic nanobody #16 (sb16)
N.A.
synthetic construct
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
7elx_H_L
7elx
the crystal structure of ctla-4 and fab
no
apoptosis
2021-04-12
2021-06-30
x-ray diffraction
2.14
0.217
0.177
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV3
H
L
MEFGLSWVFLVALLRGVQCQVQLVESGGGVVQPGRSLRLSCAASGFTFSSYTMHWVRQAPGKGLEWVTFISYDGNNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARTGWLGPFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTY...
METPAQLLFLLLLWLPDSTGEIVLTQSPGTLSLSPGERATLSCRASQSVGSSYLAWYQQKPGQAPRLLIYGAFSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYTMHWVRQAPGKGLEWVTFISYDGNNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARTGWLGPFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
EIVLTQSPGTLSLSPGERATLSCRASQSVGSSYLAWYQQKPGQAPRLLIYGAFSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
21.711824
22.597403
467
235
211
212
218
212
87
heavy chain of fab
light chain of fab
homo sapiens
homo sapiens
C
protein
cytotoxic t-lymphocyte protein 4
homo sapiens
39
14
0.78
HL
train
7elx_h_l
7elx
the crystal structure of ctla-4 and fab
no
apoptosis
2021-04-12
2021-06-30
x-ray diffraction
2.14
0.217
0.177
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV3
h
l
MEFGLSWVFLVALLRGVQCQVQLVESGGGVVQPGRSLRLSCAASGFTFSSYTMHWVRQAPGKGLEWVTFISYDGNNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARTGWLGPFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTY...
METPAQLLFLLLLWLPDSTGEIVLTQSPGTLSLSPGERATLSCRASQSVGSSYLAWYQQKPGQAPRLLIYGAFSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYTMHWVRQAPGKGLEWVTFISYDGNNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARTGWLGPFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
EIVLTQSPGTLSLSPGERATLSCRASQSVGSSYLAWYQQKPGQAPRLLIYGAFSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
21.623667
22.740868
467
235
212
212
218
212
84
heavy chain of fab
light chain of fab
homo sapiens
homo sapiens
c
protein
cytotoxic t-lymphocyte protein 4
homo sapiens
42
16
0.84
HL
train
7mgw_B_C
7mgw
5-ht bound serotonin transporter reconstituted in lipid nanodisc in nacl in occluded conformation
no
membrane protein
2021-04-13
2021-12-15
electron microscopy
3.5
N.A.
N.A.
34851672
10.1126/sciadv.abl3857
0
auth_asym_id
VH:VL
IGHV1
IGKV7
B
C
QVQLQQSGPELVKLGASVRISCKASGYRFSYSWMNWVKQRPGKGLEWIGRIYPGDGDTKYSGKFKGKATLTADKSSSTVYMQLSSLTSEDSAVYFCARSAYGSEGFAMDYWGQGTSVT
DIVLTQSPASLAVSLGQRATISCRASESVDNYGISFLNWFQQKPGQPPKLLIYAASNQGSGVPARFSGSGSGTYFSLNIHPMEEDDTAVYFCQQTKGVSWTFGGGTKVEI
QVQLQQSGPELVKLGASVRISCKASGYRFSYSWMNWVKQRPGKGLEWIGRIYPGDGDTKYSGKFKGKATLTADKSSSTVYMQLSSLTSEDSAVYFCARSAYGSEGFAMDYWGQGTSVT
DIVLTQSPASLAVSLGQRATISCRASESVDNYGISFLNWFQQKPGQPPKLLIYAASNQGSGVPARFSGSGSGTYFSLNIHPMEEDDTAVYFCQQTKGVSWTFGGGTKVEI
13.799064
13.576794
118
110
118
110
118
110
45
variable domain of 15b8 antibody fab heavy chain
variable domain of 15b8 antiboty fab light chain
mus musculus
mus musculus
A
protein
sodium-dependent serotonin transporter
homo sapiens
39
14
0.7
HL
train
7mhx_A_B
7mhx
kcsa e71v closed gate with ba2+
yes
membrane protein
2021-04-15
2022-03-23
x-ray diffraction
2.85
0.244
0.202
35322021
10.1038/s41467-022-28866-9
0
auth_asym_id
FabH:FabL
IGHV1
IGKV6
A
B
QVQLQQPGAELVKPGASVKLSCKASGYTFTSDWIHWVKQRPGHGLEWIGEIIPSYGRANYNEKIQKKATLTADKSSSTAFMQLSSLTSEDSAVYYCARERGDGYFAVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSSWPSETVTCNVAHPASSTKVDKKIVPRD
DILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPSRFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN
QVQLQQPGAELVKPGASVKLSCKASGYTFTSDWIHWVKQRPGHGLEWIGEIIPSYGRANYNEKIQKKATLTADKSSSTAFMQLSSLTSEDSAVYYCARERGDGYFAVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSSWPSETVTCNVAHPASSTKVDKKIVPRD
DILLTQSPAILSVSPGERVSFSCRASQSIGTDIHWYQQRTNGSPRLLIKYASESISGIPSRFSGSGSGTDFTLSINSVESEDIANYYCQQSNRWPFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN
21.045647
23.356241
219
212
219
212
219
212
100
fab heavy chain
fab light chain
mus musculus
mus musculus
C
protein
ph-gated potassium channel kcsa
streptomyces lividans
40
18
0.82
HL
train
7mhy_M_N
7mhy
human hedgehog acyltransferase (hhat) in complex with palmitoyl-coa and two fab antibody fragments
no
transferase/immune system
2021-04-16
2021-06-16
electron microscopy
2.7
N.A.
N.A.
34112694
10.1126/science.abg4998
0
auth_asym_id
VH:VL
IGHV1
IGKV2
M
N
MERHWIFLFLFSVTAGVHSQVQLRQSGAELAKPGASVKMSCKASGYTFTNYWLHWIKQRPGQGLEWIGYISPNTGSTEYSQKFKDRATLTADKSSSTAYMQLSSLTSEDSAVYYCAGSRITGTWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSS
MKLPVRLLVLMFWIPASRSDVLMTQTPLSLPVSLGDQVSISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYWVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTK
QVQLRQSGAELAKPGASVKMSCKASGYTFTNYWLHWIKQRPGQGLEWIGYISPNTGSTEYSQKFKDRATLTADKSSSTAYMQLSSLTSEDSAVYYCAGSRITGTWFAYWGQGTLVTVS
DVLMTQTPLSLPVSLGDQVSISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYWVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPWTFGGGTKLEIK
13.759095
13.466508
211
207
118
109
118
112
48
1c06 fab heavy chain
1c06 fab light chain
mus musculus
mus musculus
A
protein
protein-cysteine n-palmitoyltransferase hhat
homo sapiens
38
13
0.68
HL
train
7mhy_O_P
7mhy
human hedgehog acyltransferase (hhat) in complex with palmitoyl-coa and two fab antibody fragments
no
transferase/immune system
2021-04-16
2021-06-16
electron microscopy
2.7
N.A.
N.A.
34112694
10.1126/science.abg4998
0
auth_asym_id
VH:VL
IGHV7
IGKV2
O
P
MDWLWNLLFLMAAAQSAQAQIQLVQSGPELKKPGETVKISCKASGYTFTNYGMNWVRQAPGKGLKWMGWINTYTGEPTYADDFKGRFAFSLETSASTAYLQINNLKDEDMATYFCARVWNYDYYFDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSS
MKLPVRLLVLMFWIPASRSDVLMTQTPLSLPVSLGDQVSISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYRVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTK
IQLVQSGPELKKPGETVKISCKASGYTFTNYGMNWVRQAPGKGLKWMGWINTYTGEPTYADDFKGRFAFSLETSASTAYLQINNLKDEDMATYFCARVWNYDYYFDYWGQGTTLT
VLMTQTPLSLPVSLGDQVSISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYRVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPWTFGGGTKLEIK
12.979278
12.97526
211
207
100
94
115
111
39
3h02 fab heavy chain
3h02 fab light chain
mus musculus
mus musculus
A
protein
protein-cysteine n-palmitoyltransferase hhat
homo sapiens
40
11
0.44
HL
train
7mhz_O_P
7mhz
human hedgehog acyltransferase (hhat) in complex with a palmitoylated hedgehog peptide product and a fab antibody fragment
no
transferase/immune system
2021-04-16
2021-06-16
electron microscopy
3.2
N.A.
N.A.
34112694
10.1126/science.abg4998
0
auth_asym_id
VH:VL
IGHV7
IGKV2
O
P
MGWSCIILFLVATATGVHSQIQLVQSGPELKKPGETVKISCKASGYTFTNYGMNWVRQAPGKGLKWMGWINTYTGEPTYADDFKGRFAFSLETSASTAYLQINNLKDEDMATYFCARVWNYDYYFDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSE...
MKLPVRLLVLMFWIPASRSDVLMTQTPLSLPVSLGDQVSISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYRVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTK
IQLVQSGPELKKPGETVKISCKASGYTFTNYGMNWVRQAPGKGLKWMGWINTYTGEPTYADDFKGRFAFSLETSASTAYLQINNLKDEDMATYFCARVWNYDYYFDYWGQGTTLTVS
VLMTQTPLSLPVSLGDQVSISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYRVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPWTFGGGTKLEIK
13.731283
13.480697
462
207
113
111
117
111
42
3h02 fab heavy chain
3h02 fab light chain
mus musculus
mus musculus
A
protein
protein-cysteine n-palmitoyltransferase hhat
homo sapiens
40
17
0.74
HL
train
7enf_P_O
7enf
cryo-em structure of the sars-cov-2 s-6p in complex with fab30
yes
viral protein
2021-04-16
2022-04-06
electron microscopy
2.76
N.A.
N.A.
N.A.
10.1038/s41392-022-00954-8
0
auth_asym_id
FabH:FabL
IGHV3
IGKV4
P
O
EVQLVESGGGVVQPGRSLRLSCAASGFTFSSYPMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDTEDCSSTTCYVDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
DIVMTQSPDSLAVSLGERATINCKSSQSVLYRSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCHQYYSTPFTFGGGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGVVQPGRSLRLSCAASGFTFSSYPMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDTEDCSSTTCYVDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
DIVMTQSPDSLAVSLGERATINCKSSQSVLYRSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCHQYYSTPFTFGGGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.687508
23.79952
230
220
226
219
226
219
112
heavy chain of fab30
light chain of fab30
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
45
22
0.96
HL
train
7eng_H_L
7eng
cryo-em structure of the sars-cov-2 s-6p in complex with fab30 (local refinement of the rbd and fab30)
yes
viral protein
2021-04-16
2022-04-06
electron microscopy
3.59
N.A.
N.A.
N.A.
10.1038/s41392-022-00954-8
0
auth_asym_id
FabH:FabL
IGHV3
IGKV4
H
L
EVQLVESGGGVVQPGRSLRLSCAASGFTFSSYPMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDTEDCSSTTCYVDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
DIVMTQSPDSLAVSLGERATINCKSSQSVLYRSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCHQYYSTPFTFGGGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGVVQPGRSLRLSCAASGFTFSSYPMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDTEDCSSTTCYVDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
DIVMTQSPDSLAVSLGERATINCKSSQSVLYRSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCHQYYSTPFTFGGGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.7266
23.508919
230
220
226
219
226
219
112
heavy chain of fab30
light chain of fab30
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
41
20
0.95
HL
train
7o9w_C_B
7o9w
encequidar-bound human p-glycoprotein in complex with uic2-fab
yes
transport protein
2021-04-17
2022-01-12
electron microscopy
3.5
N.A.
N.A.
34928144
10.1021/acs.jmedchem.1c01272
0
auth_asym_id
FabH:FabL
IGHV1
IGKV2
C
B
EVQLQESGPELVKTGASVKISCKASGYSFSNYYIHWVKQSHGKSLEWIGFISCYNGATFYNQKFKGKATFTVDNSSSTAYMKFNSLTFEDSAVYYCARLPIQFGNFYPMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGPT
QVVMTQSPLSLPVSLGDQASISCRSSQSLLHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHIPPWTFGGGTKLDIKRADAAPTVSIFPPSSEQLTSGGLSVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVQLQESGPELVKTGASVKISCKASGYSFSNYYIHWVKQSHGKSLEWIGFISCYNGATFYNQKFKGKATFTVDNSSSTAYMKFNSLTFEDSAVYYCARLPIQFGNFYPMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGPT
QVVMTQSPLSLPVSLGDQASISCRSSQSLLHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHIPPWTFGGGTKLDIKRADAAPTVSIFPPSSEQLTSGGLSVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
24.42039
23.625027
225
220
225
220
225
220
107
uic2 fab-fragment heavy chain
uic2 fab-fragment light chain
mus musculus
mus musculus
A
protein
multidrug resistance protein 1
homo sapiens
51
20
0.87
HL
train
7oan_F
7oan
nanobody c5 bound to spike
no
antiviral protein
2021-04-19
2021-08-11
electron microscopy
3
N.A.
N.A.
34552091
10.1038/s41467-021-25480-z
0
auth_asym_id
VHH
IGHV3
N.A.
F
N.A.
MAQVQLVESGGGSVQAGGSLTLSCVASGVTLGRHAIGWFRQAPGKERERVSCIRTFDGITSYVESTKGRFTISSNNAMNTVYLQMNSLKPEDTAVYFCALGVTAACSDNPYFWGQGTQVTVSSHHHHHH
N.A.
QVQLVESGGGSVQAGGSLTLSCVASGVTLGRHAIGWFRQAPGKERERVSCIRTFDGITSYVESTKGRFTISSNNAMNTVYLQMNSLKPEDTAVYFCALGVTAACSDNPYFWGQGTQVTVSS
N.A.
13.475186
0
129
0
121
0
121
0
0
immunoglobulin mu heavy chain
N.A.
vicugna pacos
N.A.
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
43
16
0.67
H_only
train
7oan_G
7oan
nanobody c5 bound to spike
no
antiviral protein
2021-04-19
2021-08-11
electron microscopy
3
N.A.
N.A.
34552091
10.1038/s41467-021-25480-z
0
auth_asym_id
VHH
IGHV3
N.A.
G
N.A.
MAQVQLVESGGGSVQAGGSLTLSCVASGVTLGRHAIGWFRQAPGKERERVSCIRTFDGITSYVESTKGRFTISSNNAMNTVYLQMNSLKPEDTAVYFCALGVTAACSDNPYFWGQGTQVTVSSHHHHHH
N.A.
QVQLVESGGGSVQAGGSLTLSCVASGVTLGRHAIGWFRQAPGKERERVSCIRTFDGITSYVESTKGRFTISSNNAMNTVYLQMNSLKPEDTAVYFCALGVTAACSDNPYFWGQGTQVTVSS
N.A.
13.475145
0
129
0
121
0
121
0
0
immunoglobulin mu heavy chain
N.A.
vicugna pacos
N.A.
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
42
16
0.67
H_only
train
7oan_H
7oan
nanobody c5 bound to spike
no
antiviral protein
2021-04-19
2021-08-11
electron microscopy
3
N.A.
N.A.
34552091
10.1038/s41467-021-25480-z
0
auth_asym_id
VHH
IGHV3
N.A.
H
N.A.
MAQVQLVESGGGSVQAGGSLTLSCVASGVTLGRHAIGWFRQAPGKERERVSCIRTFDGITSYVESTKGRFTISSNNAMNTVYLQMNSLKPEDTAVYFCALGVTAACSDNPYFWGQGTQVTVSSHHHHHH
N.A.
QVQLVESGGGSVQAGGSLTLSCVASGVTLGRHAIGWFRQAPGKERERVSCIRTFDGITSYVESTKGRFTISSNNAMNTVYLQMNSLKPEDTAVYFCALGVTAACSDNPYFWGQGTQVTVSS
N.A.
13.475161
0
129
0
121
0
121
0
0
immunoglobulin mu heavy chain
N.A.
vicugna pacos
N.A.
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
43
16
0.67
H_only
train
7oao_B
7oao
nanobody c5 bound to rbd
no
antiviral protein
2021-04-19
2021-08-11
x-ray diffraction
1.5
0.186
0.152
34552091
10.1038/s41467-021-25480-z
0
label_asym_id
VHH
IGHV3
N.A.
B
N.A.
QVQLVESGGGSVQAGGSLTLSCVASGVTLGRHAIGWFRQAPGKERERVSCIRTFDGITSYVESTKGRFTISSNNAMNTVYLQMNSLKPEDTAVYFCALGVTAACSDNPYFWGQGTQVTVSSKHHHHHH
N.A.
QVQLVESGGGSVQAGGSLTLSCVASGVTLGRHAIGWFRQAPGKERERVSCIRTFDGITSYVESTKGRFTISSNNAMNTVYLQMNSLKPEDTAVYFCALGVTAACSDNPYFWGQGTQVTVSS
N.A.
13.581639
0
128
0
121
0
121
0
0
c5 nanobody
N.A.
lama glama
N.A.
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
41
15
0.71
H_only
train
7mjh_D
7mjh
cryo-em structure of the sars-cov-2 n501y mutant spike protein ectodomain bound to vh ab8
yes
viral protein
2021-04-20
2021-05-12
electron microscopy
2.66
N.A.
N.A.
33914735
10.1371/journal.pbio.3001237
0
auth_asym_id
VH
IGHV3
N.A.
D
N.A.
EVQLVESGGGLVQPGGSLRLSCAASGFTFDDYAMSWVRQAPGKGLEWIGRMYNNGRTSYNPSLKSLVTISRDNSKNTLYLQMNSLRAEDTATYYCARDNLGYRPSENLYGMDVWGQGTTVTVSSSGQAGHHHHHHGDYKDDDDKG
N.A.
EVQLVESGGGLVQPGGSLRLSCAASGFTFDDYAMSWVRQAPGKGLEWIGRMYNNGRTSYNPSLKSLVTISRDNSKNTLYLQMNSLRAEDTATYYCARDNLGYRPSENLYGMDVWGQGTTVTVSSS
N.A.
14.281859
0
145
0
125
0
125
0
0
vh ab8
N.A.
synthetic construct
N.A.
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
45
16
0.64
H_only
train
7mjh_E
7mjh
cryo-em structure of the sars-cov-2 n501y mutant spike protein ectodomain bound to vh ab8
yes
viral protein
2021-04-20
2021-05-12
electron microscopy
2.66
N.A.
N.A.
33914735
10.1371/journal.pbio.3001237
0
auth_asym_id
VH
IGHV3
N.A.
E
N.A.
EVQLVESGGGLVQPGGSLRLSCAASGFTFDDYAMSWVRQAPGKGLEWIGRMYNNGRTSYNPSLKSLVTISRDNSKNTLYLQMNSLRAEDTATYYCARDNLGYRPSENLYGMDVWGQGTTVTVSSSGQAGHHHHHHGDYKDDDDKG
N.A.
EVQLVESGGGLVQPGGSLRLSCAASGFTFDDYAMSWVRQAPGKGLEWIGRMYNNGRTSYNPSLKSLVTISRDNSKNTLYLQMNSLRAEDTATYYCARDNLGYRPSENLYGMDVWGQGTTVTVSSS
N.A.
14.22955
0
145
0
125
0
125
0
0
vh ab8
N.A.
synthetic construct
N.A.
B;C
protein;protein
spike glycoprotein;spike glycoprotein
severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2
43;13
15;5
0.62;1.0
H_only
train
7mjh_F
7mjh
cryo-em structure of the sars-cov-2 n501y mutant spike protein ectodomain bound to vh ab8
yes
viral protein
2021-04-20
2021-05-12
electron microscopy
2.66
N.A.
N.A.
33914735
10.1371/journal.pbio.3001237
0
auth_asym_id
VH
IGHV3
N.A.
F
N.A.
EVQLVESGGGLVQPGGSLRLSCAASGFTFDDYAMSWVRQAPGKGLEWIGRMYNNGRTSYNPSLKSLVTISRDNSKNTLYLQMNSLRAEDTATYYCARDNLGYRPSENLYGMDVWGQGTTVTVSSSGQAGHHHHHHGDYKDDDDKG
N.A.
EVQLVESGGGLVQPGGSLRLSCAASGFTFDDYAMSWVRQAPGKGLEWIGRMYNNGRTSYNPSLKSLVTISRDNSKNTLYLQMNSLRAEDTATYYCARDNLGYRPSENLYGMDVWGQGTTVTVSSS
N.A.
14.228848
0
145
0
125
0
125
0
0
vh ab8
N.A.
synthetic construct
N.A.
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
46
16
0.64
H_only
train
7mji_E
7mji
cryo-em structure of the sars-cov-2 n501y mutant spike protein ectodomain bound to vh ab8 (focused refinement of rbd and vh ab8)
yes
viral protein/immune system
2021-04-20
2021-05-12
electron microscopy
2.81
N.A.
N.A.
33914735
10.1371/journal.pbio.3001237
0
auth_asym_id
VH
IGHV3
N.A.
E
N.A.
EVQLVESGGGLVQPGGSLRLSCAASGFTFDDYAMSWVRQAPGKGLEWIGRMYNNGRTSYNPSLKSLVTISRDNSKNTLYLQMNSLRAEDTATYYCARDNLGYRPSENLYGMDVWGQGTTVTVSSSGQAGHHHHHHGDYKDDDDKG
N.A.
EVQLVESGGGLVQPGGSLRLSCAASGFTFDDYAMSWVRQAPGKGLEWIGRMYNNGRTSYNPSLKSLVTISRDNSKNTLYLQMNSLRAEDTATYYCARDNLGYRPSENLYGMDVWGQGTTVTVSSS
N.A.
14.198809
0
145
0
125
0
125
0
0
vh ab8
N.A.
synthetic construct
N.A.
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
46
16
0.64
H_only
train
7mjl_H_L
7mjl
cryo-em structure of the sars-cov-2 n501y mutant spike protein ectodomain bound to fab ab1 (focused refinement of rbd and fab ab1)
yes
viral protein/immune system
2021-04-20
2021-05-12
electron microscopy
2.95
N.A.
N.A.
33914735
10.1371/journal.pbio.3001237
0
auth_asym_id
FabH:FabL
IGHV3
IGKV3
H
L
EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYCARGYGDYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTSGQAGHHHHHHGDYKDDDDKG
DVVMTQSPATLSLSPGEKATLSCRASQSVSSYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYCARGYGDYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DVVMTQSPATLSLSPGEKATLSCRASQSVSSYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
20.494299
23.1571
244
214
211
213
217
213
87
fab ab1 heavy chain
fab ab1 light chain
synthetic construct
synthetic construct
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
63
24
0.8
HL
train
7mjs_H_L
7mjs
single-particle cryo-em structure of major facilitator superfamily domain containing 2a in complex with lpc-18:3
no
lipid transport/immune system
2021-04-20
2021-06-16
electron microscopy
3.03
N.A.
N.A.
34135507
10.1038/s41586-021-03650-9
0
auth_asym_id
VH:VL
IGHV3
IGKV1
H
L
EISEVQLVESGGGLVQPGGSLRLSCAASGFNIYSSSIHWVRQAPGKGLEWVAYIYSYSGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSLEYLYSSGYQYKWATGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSFYNQPFTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFNIYSSSIHWVRQAPGKGLEWVAYIYSYSGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSLEYLYSSGYQYKWATGLDYWGQGTLVTVSSAST
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSFYNQPFTFGQGTKVEIKRTVA
15.418015
14.06942
240
217
132
113
132
113
62
2ag3 fab heavy chain
2ag3 fab light chain
synthetic construct
synthetic construct
X
protein
major facilitator superfamily domain containing 2a
gallus gallus
45
16
0.89
HL
train
7oay_B
7oay
nanobody f2 bound to rbd
no
antiviral protein
2021-04-20
2021-08-11
x-ray diffraction
2.34
0.228
0.192
34552091
10.1038/s41467-021-25480-z
0
label_asym_id
VHH
IGHV3
N.A.
B
N.A.
QVQLVESGGGLVQAGGSLRLACIASGRTFHSYVMAWFRQAPGKEREFVAAISWSSTPTYYGESVKGRFTISRDNAKNTVYLQMNRLKPEDTAVYFCAADRGESYYYTRPTEYEFWGQGTQVTVSSKHHHHHH
N.A.
QVQLVESGGGLVQAGGSLRLACIASGRTFHSYVMAWFRQAPGKEREFVAAISWSSTPTYYGESVKGRFTISRDNAKNTVYLQMNRLKPEDTAVYFCAADRGESYYYTRPTEYEFWGQGTQVTVSS
N.A.
13.785016
0
132
0
125
0
125
0
0
f2 nanobody
N.A.
lama glama
N.A.
A;E
protein;protein
spike protein s1;spike protein s1
severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2
40;12
15;5
0.94;0.83
H_only
train
7oay_D
7oay
nanobody f2 bound to rbd
no
antiviral protein
2021-04-20
2021-08-11
x-ray diffraction
2.34
0.228
0.192
34552091
10.1038/s41467-021-25480-z
0
label_asym_id
VHH
IGHV3
N.A.
D
N.A.
QVQLVESGGGLVQAGGSLRLACIASGRTFHSYVMAWFRQAPGKEREFVAAISWSSTPTYYGESVKGRFTISRDNAKNTVYLQMNRLKPEDTAVYFCAADRGESYYYTRPTEYEFWGQGTQVTVSSKHHHHHH
N.A.
QVQLVESGGGLVQAGGSLRLACIASGRTFHSYVMAWFRQAPGKEREFVAAISWSSTPTYYGESVKGRFTISRDNAKNTVYLQMNRLKPEDTAVYFCAADRGESYYYTRPTEYEFWGQGTQVTVSS
N.A.
13.783416
0
132
0
125
0
125
0
0
f2 nanobody
N.A.
lama glama
N.A.
C
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
40
16
0.94
H_only
train
7oay_F
7oay
nanobody f2 bound to rbd
no
antiviral protein
2021-04-20
2021-08-11
x-ray diffraction
2.34
0.228
0.192
34552091
10.1038/s41467-021-25480-z
0
label_asym_id
VHH
IGHV3
N.A.
F
N.A.
QVQLVESGGGLVQAGGSLRLACIASGRTFHSYVMAWFRQAPGKEREFVAAISWSSTPTYYGESVKGRFTISRDNAKNTVYLQMNRLKPEDTAVYFCAADRGESYYYTRPTEYEFWGQGTQVTVSSKHHHHHH
N.A.
QVQLVESGGGLVQAGGSLRLACIASGRTFHSYVMAWFRQAPGKEREFVAAISWSSTPTYYGESVKGRFTISRDNAKNTVYLQMNRLKPEDTAVYFCAADRGESYYYTRPTEYEFWGQGTQVTVS
N.A.
13.675492
0
132
0
124
0
124
0
0
f2 nanobody
N.A.
lama glama
N.A.
C;E
protein;protein
spike protein s1;spike protein s1
severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2
12;39
5;14
0.71;0.93
H_only
train
7oay_H
7oay
nanobody f2 bound to rbd
no
antiviral protein
2021-04-20
2021-08-11
x-ray diffraction
2.34
0.228
0.192
34552091
10.1038/s41467-021-25480-z
0
label_asym_id
VHH
IGHV3
N.A.
H
N.A.
QVQLVESGGGLVQAGGSLRLACIASGRTFHSYVMAWFRQAPGKEREFVAAISWSSTPTYYGESVKGRFTISRDNAKNTVYLQMNRLKPEDTAVYFCAADRGESYYYTRPTEYEFWGQGTQVTVSSKHHHHHH
N.A.
QVQLVESGGGLVQAGGSLRLACIASGRTFHSYVMAWFRQAPGKEREFVAAISWSSTPTYYGESVKGRFTISRDNAKNTVYLQMNRLKPEDTAVYFCAADRGESYYYTRPTEYEFWGQGTQVTVSS
N.A.
13.802302
0
132
0
125
0
125
0
0
f2 nanobody
N.A.
lama glama
N.A.
G
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
39
15
0.88
H_only
train
7oay_J
7oay
nanobody f2 bound to rbd
no
antiviral protein
2021-04-20
2021-08-11
x-ray diffraction
2.34
0.228
0.192
34552091
10.1038/s41467-021-25480-z
0
label_asym_id
VHH
IGHV3
N.A.
J
N.A.
QVQLVESGGGLVQAGGSLRLACIASGRTFHSYVMAWFRQAPGKEREFVAAISWSSTPTYYGESVKGRFTISRDNAKNTVYLQMNRLKPEDTAVYFCAADRGESYYYTRPTEYEFWGQGTQVTVSSKHHHHHH
N.A.
QVQLVESGGGLVQAGGSLRLACIASGRTFHSYVMAWFRQAPGKEREFVAAISWSSTPTYYGESVKGRFTISRDNAKNTVYLQMNRLKPEDTAVYFCAADRGESYYYTRPTEYEFWGQGTQVTVSS
N.A.
13.814633
0
132
0
125
0
125
0
0
f2 nanobody
N.A.
lama glama
N.A.
I
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
40
15
0.88
H_only
train
7oay_L
7oay
nanobody f2 bound to rbd
no
antiviral protein
2021-04-20
2021-08-11
x-ray diffraction
2.34
0.228
0.192
34552091
10.1038/s41467-021-25480-z
0
label_asym_id
VHH
IGHV3
N.A.
L
N.A.
QVQLVESGGGLVQAGGSLRLACIASGRTFHSYVMAWFRQAPGKEREFVAAISWSSTPTYYGESVKGRFTISRDNAKNTVYLQMNRLKPEDTAVYFCAADRGESYYYTRPTEYEFWGQGTQVTVSSKHHHHHH
N.A.
QVQLVESGGGLVQAGGSLRLACIASGRTFHSYVMAWFRQAPGKEREFVAAISWSSTPTYYGESVKGRFTISRDNAKNTVYLQMNRLKPEDTAVYFCAADRGESYYYTRPTEYEFWGQGTQVTVSS
N.A.
13.773805
0
132
0
125
0
125
0
0
f2 nanobody
N.A.
lama glama
N.A.
K
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
40
15
0.88
H_only
train
7eo0_H_L
7eo0
foot and mouth disease virus o/tibet/99-bound the single chain fragmen antibody c4
no
virus
2021-04-21
2021-08-18
electron microscopy
3.75
N.A.
N.A.
34406868
10.1128/JVI.00881-21
0
auth_asym_id
VH:VL
IGHV4
IGLV1
H
L
QVQLRESGPSLVKPSQTLFLTCTVSGFSLTSYSVNWVRQTPGKMLECLGGIATSGSTGYNPVLKSRLRITKDNSKSQVSLSVSNVTPEDTATYYCAKWSSRGGYDCGVHSSDYSYLDAWGQGLLVTVSS
WAQAVLTQPSSVSASLGQRVSITCSGSSSNIGRYGATWYQQVPGSGLRTIIYGSSRRPSGVPDRFSGSKSGNTVTLTISSLQPEDEADYFCAAYDISTNAVFGSGTTLTLLGDYKDDDDKGG
QVQLRESGPSLVKPSQTLFLTCTVSGFSLTSYSVNWVRQTPGKMLECLGGIATSGSTGYNPVLKSRLRITKDNSKSQVSLSVSNVTPEDTATYYCAKWSSRGGYDCGVHSSDYSYLDAWGQGLLVTVSS
AVLTQPSSVSASLGQRVSITCSGSSSNIGRYGATWYQQVPGSGLRTIIYGSSRRPSGVPDRFSGSKSGNTVTLTISSLQPEDEADYFCAAYDISTNAVFGSGTTLTLL
13.991598
13.227364
129
122
129
108
129
108
61
ig heavy chain variable region
ig lamda chain variable region
bos taurus
bos taurus
3
protein
o/tibet/99 vp3
foot-and-mouth disease virus
48
24
0.96
HL
train
7eo2_E
7eo2
cryo-em of sphingosine 1-phosphate receptor 1 / gi complex bound to fty720p
no
membrane protein
2021-04-21
2022-01-05
electron microscopy
2.89
N.A.
N.A.
34937912
10.1038/s41589-021-00930-3
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.745773
0
247
0
231
0
247
0
0
scfv16
N.A.
homo sapiens
N.A.
B;C
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
31;19
19;8
0.95;0.8
H_only
train
7eo4_E
7eo4
cryo-em of sphingosine 1-phosphate receptor 1 / gi complex bound to baf312
no
membrane protein
2021-04-21
2022-01-05
electron microscopy
2.86
N.A.
N.A.
34937912
10.1038/s41589-021-00930-3
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.794905
0
247
0
231
0
247
0
0
scfv16
N.A.
homo sapiens
N.A.
B;C
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
30;19
20;8
1.0;0.8
H_only
train
7mk6_A_B
7mk6
kcsa open gate e71v mutant with sodium
yes
membrane protein
2021-04-21
2022-03-23
x-ray diffraction
3.1
0.253
0.208
35322021
10.1038/s41467-022-28866-9
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
A
B
EISEVQLVESGGGLVQPGGSLRLSCAASGYTFTSDWIHWVRQAPGKGLEWIGEIIPSYGRANYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARERGDGYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
SDIQMTQSPSSLSASVGDRVTITCRASQSIGTDIHWYQQKPGKAPKLLIKYASESISGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSNRWPFTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLVESGGGLVQPGGSLRLSCAASGYTFTSDWIHWVRQAPGKGLEWIGEIIPSYGRANYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARERGDGYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIQMTQSPSSLSASVGDRVTITCRASQSIGTDIHWYQQKPGKAPKLLIKYASESISGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSNRWPFTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVT
20.634874
22.97886
229
215
209
195
217
197
83
fab heavy chain
fab light chain
synthetic construct
synthetic construct
C
protein
ph-gated potassium channel kcsa
streptomyces lividans
41
17
0.77
HL
train
7obf_A
7obf
crystal structure of the human vh antibody domain hel4
no
hydrolase
2021-04-22
2021-05-05
x-ray diffraction
2.7
0.264
0.214
N.A.
N.A.
0
auth_asym_id
VH
IGHV3
N.A.
A
N.A.
EVQLLESGGGLVQPGGSLRLSCAASGFRISDEDMGWVRQAPGKGLEWVSSIYGPSGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCASALEPLSEPLGFWGQGTLVTVSSLEALS
N.A.
EVQLLESGGGLVQPGGSLRLSCAASGFRISDEDMGWVRQAPGKGLEWVSSIYGPSGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCASALEPLSEPLGFWGQGTLVTVSSLEALS
N.A.
14.449125
0
125
0
125
0
125
0
0
hel4
N.A.
homo sapiens
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
7obf_B
7obf
crystal structure of the human vh antibody domain hel4
no
hydrolase
2021-04-22
2021-05-05
x-ray diffraction
2.7
0.264
0.214
N.A.
N.A.
0
auth_asym_id
VH
IGHV3
N.A.
B
N.A.
EVQLLESGGGLVQPGGSLRLSCAASGFRISDEDMGWVRQAPGKGLEWVSSIYGPSGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCASALEPLSEPLGFWGQGTLVTVSSLEALS
N.A.
EVQLLESGGGLVQPGGSLRLSCAASGFRISDEDMGWVRQAPGKGLEWVSSIYGPSGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCASALEPLSEPLGFWGQGTLVTVSS
N.A.
14.006237
0
125
0
120
0
120
0
0
hel4
N.A.
homo sapiens
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
7mkm_H_L
7mkm
sars-cov-2 spike rbd in complex with neutralizing fab sars2-38 (local refinement)
no
viral protein/immune system
2021-04-24
2021-05-12
electron microscopy
3.16
N.A.
N.A.
34481543
10.1016/j.immuni.2021.08.016
0
auth_asym_id
VH:VL
IGHV4
IGKV3
H
L
QVQLKESGPGLVAPSQSLSITCTVSGFSLTRYGVHWVRQPPGKGLEWLGVIWADGSTYYNSALMSRLSISKDNSKSQVFLNMNSLQTDDTAKYYCARDGRGYDDYWGQGTTLT
QIVLTQSPAIMSASPGEKVTMTCSASSTVSFIYWYQQKPGSSPRLLIYDTSNPASGVPVRFSGSGCGTSYYLTISRMEAEDAATYYCQQWNTYPLTFGAGTKLEL
QVQLKESGPGLVAPSQSLSITCTVSGFSLTRYGVHWVRQPPGKGLEWLGVIWADGSTYYNSALMSRLSISKDNSKSQVFLNMNSLQTDDTAKYYCARDGRGYDDYWGQGTTLT
QIVLTQSPAIMSASPGEKVTMTCSASSTVSFIYWYQQKPGSSPRLLIYDTSNPASGVPVRFSGSGCGTSYYLTISRMEAEDAATYYCQQWNTYPLTFGAGTKLEL
14.058489
13.826253
113
105
113
105
113
105
36
sars2-38 fv heavy chain
sars2-38 fv light chain
mus musculus
mus musculus
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
25
13
1
HL
train
7epb_C
7epb
cryo-em structure of ly354740-bound mglu2 homodimer
yes
membrane protein
2021-04-26
2021-06-23
electron microscopy
3.1
N.A.
N.A.
34135509
10.1038/s41586-021-03641-w
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
QVQLVQSGGGLVQAGGSLRLSCAASVRFFSINTMGWYRQAPGKQRELVADITSSGSTNYADSGKGRFTISRDNAKNTVYLQMNRLKPEDTAVYYCHADYKYTTHNTAWGQGTQVTVSSGRPLEVLFQGPHHHHHHHH
N.A.
QVQLVQSGGGLVQAGGSLRLSCAASVRFFSINTMGWYRQAPGKQRELVADITSSGSTNYADSGKGRFTISRDNAKNTVYLQMNRLKPEDTAVYYCHADYKYTTHNTAWGQGTQVTVSS
N.A.
14.349908
0
137
0
118
0
118
0
0
anti-ron nanobody
N.A.
lama glama
N.A.
A;B
protein;protein
metabotropic glutamate receptor 2;metabotropic glutamate receptor 2
homo sapiens;homo sapiens
48;30
7;6
0.32;0.55
H_only
train
7epb_D
7epb
cryo-em structure of ly354740-bound mglu2 homodimer
yes
membrane protein
2021-04-26
2021-06-23
electron microscopy
3.1
N.A.
N.A.
34135509
10.1038/s41586-021-03641-w
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
QVQLVQSGGGLVQAGGSLRLSCAASVRFFSINTMGWYRQAPGKQRELVADITSSGSTNYADSGKGRFTISRDNAKNTVYLQMNRLKPEDTAVYYCHADYKYTTHNTAWGQGTQVTVSSGRPLEVLFQGPHHHHHHHH
N.A.
QVQLVQSGGGLVQAGGSLRLSCAASVRFFSINTMGWYRQAPGKQRELVADITSSGSTNYADSGKGRFTISRDNAKNTVYLQMNRLKPEDTAVYYCHADYKYTTHNTAWGQGTQVTVSS
N.A.
14.346399
0
137
0
118
0
118
0
0
anti-ron nanobody
N.A.
lama glama
N.A.
A;B
protein;protein
metabotropic glutamate receptor 2;metabotropic glutamate receptor 2
homo sapiens;homo sapiens
28;51
6;7
0.55;0.29
H_only
train
7epu_A
7epu
crystal structure of hsalc1
no
motor protein
2021-04-27
2021-07-14
x-ray diffraction
3.5
0.316
0.268
34210977
10.1038/s41467-021-24320-4
0
auth_asym_id
scFv
N.A.
N.A.
A
N.A.
ASQVQLQQSGPGLVRPSQTLSLTCAISGDSVSDNDAAWNWVRQSPSRGLEWLGRTYYRSKWSNEYAVFVQSRITINPDTSKNQFSLHLNSVTPEDTAVYYCARATRPTGNGLDIWGQGTMVTVSSGILGSGGGGSGGGGSGGGGSSYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTAALTISRVEAGDEADYYCQVWDSSSDHVVFGGGTKLTVLSGILHHHHHH
N.A.
QVQLQQSGPGLVRPSQTLSLTCAISGDSVSDNDAAWNWVRQSPSRGLEWLGRTYYRSKWSNEYAVFVQSRITINPDTSKNQFSLHLNSVTPEDTAVYYCARATRPTGNGLDIWGQGTMVTVSSGILGSGGGGSGGGGSGGGGSSYVLTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTAALTISRVEAGDEADYYCQVWDSSSDHVVFGGGTKLTVLS
N.A.
17.545288
0
263
0
230
0
252
0
0
non-immunized human scfv
N.A.
homo sapiens
N.A.
B
protein
chromodomain-helicase-dna-binding protein 1-like
homo sapiens
67
20
0.56
H_only
train
7ept_N
7ept
structural basis for the tethered peptide activation of adhesion gpcrs
no
structural protein
2021-04-27
2022-05-11
electron microscopy
3
N.A.
N.A.
35418678
10.1038/s41586-022-04619-y
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
VQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVS
N.A.
13.615748
0
128
0
126
0
126
0
0
nanobody-35
N.A.
synthetic construct
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
42;30
13;11
0.65;0.73
H_only
train
7ocj_G
7ocj
crystal structure of e.coli lexa in complex with nanobody nbsos2(nb14509)
no
transcription
2021-04-27
2022-10-26
x-ray diffraction
2.7
0.26
0.228
36240773
10.1016/j.str.2022.09.004
0
auth_asym_id
VHH
IGHV3
N.A.
G
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGSIRSLNAMGWYRQAPGKQRELVAAITSRGSTRYGDFVKGRFTISRGNAKNTVYLQMNSLSVEDTAVYYCKQTQLGYDYWGQGTQVTVSS
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGSIRSLNAMGWYRQAPGKQRELVAAITSRGSTRYGDFVKGRFTISRGNAKNTVYLQMNSLSVEDTAVYYCKQTQLGYDYWGQGTQVTVSS
N.A.
13.64379
0
115
0
115
0
115
0
0
nbsos2 (14509)
N.A.
lama glama
N.A.
A
protein
lexa repressor
escherichia coli
22
11
0.85
H_only
train
7ocj_E
7ocj
crystal structure of e.coli lexa in complex with nanobody nbsos2(nb14509)
no
transcription
2021-04-27
2022-10-26
x-ray diffraction
2.7
0.26
0.228
36240773
10.1016/j.str.2022.09.004
0
auth_asym_id
VHH
IGHV3
N.A.
E
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGSIRSLNAMGWYRQAPGKQRELVAAITSRGSTRYGDFVKGRFTISRGNAKNTVYLQMNSLSVEDTAVYYCKQTQLGYDYWGQGTQVTVSS
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGSIRSLNAMGWYRQAPGKQRELVAAITSRGSTRYGDFVKGRFTISRGNAKNTVYLQMNSLSVEDTAVYYCKQTQLGYDYWGQGTQVTVSS
N.A.
13.677815
0
115
0
115
0
115
0
0
nbsos2 (14509)
N.A.
lama glama
N.A.
A;C
protein;protein
lexa repressor;lexa repressor
escherichia coli;escherichia coli
39;23
6;13
0.25;0.93
H_only
train
7ocj_B
7ocj
crystal structure of e.coli lexa in complex with nanobody nbsos2(nb14509)
no
transcription
2021-04-27
2022-10-26
x-ray diffraction
2.7
0.26
0.228
36240773
10.1016/j.str.2022.09.004
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGSIRSLNAMGWYRQAPGKQRELVAAITSRGSTRYGDFVKGRFTISRGNAKNTVYLQMNSLSVEDTAVYYCKQTQLGYDYWGQGTQVTVSS
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGSIRSLNAMGWYRQAPGKQRELVAAITSRGSTRYGDFVKGRFTISRGNAKNTVYLQMNSLSVEDTAVYYCKQTQLGYDYWGQGTQVTVSS
N.A.
13.681866
0
115
0
115
0
115
0
0
nbsos2 (14509)
N.A.
lama glama
N.A.
D
protein
lexa repressor
escherichia coli
23
11
0.92
H_only
train
7ocj_H
7ocj
crystal structure of e.coli lexa in complex with nanobody nbsos2(nb14509)
no
transcription
2021-04-27
2022-10-26
x-ray diffraction
2.7
0.26
0.228
36240773
10.1016/j.str.2022.09.004
0
auth_asym_id
VHH
IGHV3
N.A.
H
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGSIRSLNAMGWYRQAPGKQRELVAAITSRGSTRYGDFVKGRFTISRGNAKNTVYLQMNSLSVEDTAVYYCKQTQLGYDYWGQGTQVTVSS
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGSIRSLNAMGWYRQAPGKQRELVAAITSRGSTRYGDFVKGRFTISRGNAKNTVYLQMNSLSVEDTAVYYCKQTQLGYDYWGQGTQVTVSS
N.A.
13.626062
0
115
0
114
0
115
0
0
nbsos2 (14509)
N.A.
lama glama
N.A.
D;F
protein;protein
lexa repressor;lexa repressor
escherichia coli;escherichia coli
40;22
6;11
0.25;0.92
H_only
train
7mlh_E_D
7mlh
crystal structure of human ige (2f10) in complex with der p 2.0103
no
allergen/immune system
2021-04-28
2022-05-04
x-ray diffraction
2.1
0.247
0.21
35799831
10.1093/pnasnexus/pgac054
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
E
D
QVQLVQSGAEVKKPGSSVKVSCKASGGTFNTYSLSWVRQAPGQGLEWMGGIIPNFGRGNYAQKFQGRVTITADESSAYMELSSLRSEDTAVYYCATFRLTGYSGSGSYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCHHHHHH
DIQMTQSPSTLSASVGDRVTITCRASQNINNWLAWYQQKPGKAPNLLIYKASTLETGVPSRFSGSGSGTEFTLTISSLQPDDLATYYCQQYHSHRTFGQGTKVEVKGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVQSGAEVKKPGSSVKVSCKASGGTFNTYSLSWVRQAPGQGLEWMGGIIPNFGRGNYAQKFQGRVTITADESSAYMELSSLRSEDTAVYYCATFRLTGYSGSGSYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQMTQSPSTLSASVGDRVTITCRASQNINNWLAWYQQKPGKAPNLLIYKASTLETGVPSRFSGSGSGTEFTLTISSLQPDDLATYYCQQYHSHRTFGQGTKVEVKGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE
20.780203
23.74754
228
212
215
210
220
210
91
ige heavy chain
ige light chain
homo sapiens
homo sapiens
B
protein
der p 2 variant 3
dermatophagoides pteronyssinus
35
19
0.9
HL
train
7mlh_C_A
7mlh
crystal structure of human ige (2f10) in complex with der p 2.0103
no
allergen/immune system
2021-04-28
2022-05-04
x-ray diffraction
2.1
0.247
0.21
35799831
10.1093/pnasnexus/pgac054
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
C
A
QVQLVQSGAEVKKPGSSVKVSCKASGGTFNTYSLSWVRQAPGQGLEWMGGIIPNFGRGNYAQKFQGRVTITADESSAYMELSSLRSEDTAVYYCATFRLTGYSGSGSYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCHHHHHH
DIQMTQSPSTLSASVGDRVTITCRASQNINNWLAWYQQKPGKAPNLLIYKASTLETGVPSRFSGSGSGTEFTLTISSLQPDDLATYYCQQYHSHRTFGQGTKVEVKGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVQSGAEVKKPGSSVKVSCKASGGTFNTYSLSWVRQAPGQGLEWMGGIIPNFGRGNYAQKFQGRVTITADESSAYMELSSLRSEDTAVYYCATFRLTGYSGSGSYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIQMTQSPSTLSASVGDRVTITCRASQNINNWLAWYQQKPGKAPNLLIYKASTLETGVPSRFSGSGSGTEFTLTISSLQPDDLATYYCQQYHSHRTFGQGTKVEVKGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
20.359707
23.697119
228
212
207
209
219
209
91
ige heavy chain
ige light chain
homo sapiens
homo sapiens
F
protein
der p 2 variant 3
dermatophagoides pteronyssinus
36
20
0.91
HL
train
7epx_H_L
7epx
s protein of sars-cov-2 in complex with gw01
yes
viral protein
2021-04-28
2022-05-18
electron microscopy
3
N.A.
N.A.
35443747
10.1038/s41421-022-00401-6
0
auth_asym_id
FabH:FabL
IGHV3
IGLV1
H
L
EVQLVESGGGVVQPGGSLRLSCAASGFRFDDHAMHWVRQAPGKGLEWVSVISGDGGSTYYADSVKGRFSISRDDSKNSLYLQMNSLRTEDTALYYCAKDRSYGPPDVFNYEYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLH...
QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLVESGGGVVQPGGSLRLSCAASGFRFDDHAMHWVRQAPGKGLEWVSVISGDGGSTYYADSVKGRFSISRDDSKNSLYLQMNSLRTEDTALYYCAKDRSYGPPDVFNYEYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
SVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
23.43794
23.35154
457
215
228
211
228
211
98
heavy chain of gw01
light chain of gw01
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
43
15
0.75
HL
train
7epx_I_M
7epx
s protein of sars-cov-2 in complex with gw01
yes
viral protein
2021-04-28
2022-05-18
electron microscopy
3
N.A.
N.A.
35443747
10.1038/s41421-022-00401-6
0
auth_asym_id
FabH:FabL
IGHV3
IGLV1
I
M
EVQLVESGGGVVQPGGSLRLSCAASGFRFDDHAMHWVRQAPGKGLEWVSVISGDGGSTYYADSVKGRFSISRDDSKNSLYLQMNSLRTEDTALYYCAKDRSYGPPDVFNYEYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLH...
QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLVESGGGVVQPGGSLRLSCAASGFRFDDHAMHWVRQAPGKGLEWVSVISGDGGSTYYADSVKGRFSISRDDSKNSLYLQMNSLRTEDTALYYCAKDRSYGPPDVFNYEYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
SVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
23.43794
23.351553
457
215
228
211
228
211
98
heavy chain of gw01
light chain of gw01
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
43
15
0.75
HL
train
7ocy_C
7ocy
enterococcus faecalis efrcd in complex with a nanobody
no
membrane protein
2021-04-28
2022-05-18
electron microscopy
4.25
N.A.
N.A.
36443574
10.1038/s41589-022-01205-1
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
GPSQLQLVESGGGLVQAGDTLRLSCEASRSFNRMGWYRQAPGKQRDMVAHIFSDGRTRYADSVQGRFTISRDNAKNTVYLQMNNLKPEDTAVYYCNGFFIQDFWGQGTPVTVSA
N.A.
QLVESGGGLVQAGDTLRLSCEASRSFNRMGWYRQAPGKQRDMVAHIFSDGRTRYADSVQGRFTISRDNAKNTVYLQMNNLKPEDTAVYYCNGFFIQDFWGQGTPVTVS
N.A.
13.312536
0
114
0
108
0
108
0
0
nanobody
N.A.
vicugna pacos
N.A.
A;B
protein;protein
abc transporter atp-binding protein;abc transporter atp-binding protein
enterococcus faecalis;enterococcus faecalis
21;14
7;7
0.78;0.88
H_only
train
7mlz_H_L
7mlz
cryo-em structure of sars-cov-2 spike in complex with neutralizing antibody b1-182.1 that targets the receptor-binding domain
no
immune system/viral protein
2021-04-29
2021-07-28
electron microscopy
3.71
N.A.
N.A.
34210892
10.1126/science.abh1766
0
auth_asym_id
FabH:FabL
IGHV1
IGKV3
H
L
QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSSAVQWVRQARGQRLEWIGWIVVGSGNTNYAQKFQERVTITRDMSTSTAYMELSSLRSEDTAVYYCAAPYCSGGSCFDGFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGFPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGNSPWTFGQGTKVEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
MQLVQSGPEVKKPGTSVKVSCKASGFTFTSSAVQWVRQARGQRLEWIGWIVVGSGNTNYAQKFQERVTITRDMSTSTAYMELSSLRSEDTAVYYCAAPYCSGGSCFDGFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGFPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGNSPWTFGQGTKVEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
21.755287
23.535954
228
215
215
213
222
213
81
b1-182.1 fab heavy chain
b1-182.1 fab light chain
homo sapiens
homo sapiens
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
48
22
0.81
HL
train
7mm0_H_L
7mm0
cryo-em structure of sars-cov-2 spike in complex with neutralizing antibody b1-182.1 that targets the receptor-binding domain
yes
immune system/viral protein
2021-04-29
2021-07-28
electron microscopy
3.15
N.A.
N.A.
34210892
10.1126/science.abh1766
0
auth_asym_id
VH:VL
IGHV1
IGKV3
H
L
QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSSAVQWVRQARGQRLEWIGWIVVGSGNTNYAQKFQERVTITRDMSTSTAYMELSSLRSEDTAVYYCAAPYCSGGSCFDGFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGFPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGNSPWTFGQGTKVEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
MQLVQSGPEVKKPGTSVKVSCKASGFTFTSSAVQWVRQARGQRLEWIGWIVVGSGNTNYAQKFQERVTITRDMSTSTAYMELSSLRSEDTAVYYCAAPYCSGGSCFDGFDIWGQGTMVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGFPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGNSPWTFGQGTKVEI
14.270522
13.402903
228
215
122
107
122
107
37
b1-182.1 fab heavy chain
b1-182.1 fab light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
48
21
0.81
HL
train
7mlx_H_L
7mlx
sars-cov-2 programmed -1 frameshifting element three stem h-type pseudoknot
yes
rna/immune system
2021-04-29
2021-08-11
x-ray diffraction
2.09
0.231
0.199
34328734
10.1021/acschembio.1c00324
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EISEVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPNTFGEGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSADSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPNTFGEGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSADSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
21.39363
23.389263
233
215
216
213
223
213
102
bl3-6 fab heavy chain
bl3-6 fab light chain
homo sapiens
homo sapiens
R
RNA
rna (65-mer)
severe acute respiratory syndrome coronavirus 2
32
21
0.91
HL
train
7mmn_D_E
7mmn
crystal structure of the prefusion rsv f glycoprotein bound by human antibody am14
yes
immune system/viral protein
2021-04-29
2021-09-08
x-ray diffraction
3.57
0.245
0.202
34420474
10.1080/19420862.2021.1955812
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
D
E
CVQLVESGGGVVQPGRSLRLSCAASGFSFSHYAMHWVRQAPGKGLEWVAVISYDGENTYYADSVKGRFSISRDNSKNTVSLQMNSLRPEDTALYYCARDRIVDDYYYYGMDVWGQGATVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGSENLYFQGSHHHHHH
GDIQMTQSPSSLSASVGDRVTITCQASQDIKKYLNWYHQKPGKVPELLMHDASNLETGVPSRFSGRGSGTDFTLTISSLQPEDIGTYYCQQYDNLPPLTFGGGTKVEIKRTVRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLVESGGGVVQPGRSLRLSCAASGFSFSHYAMHWVRQAPGKGLEWVAVISYDGENTYYADSVKGRFSISRDNSKNTVSLQMNSLRPEDTALYYCARDRIVDDYYYYGMDVWGQGATVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIQMTQSPSSLSASVGDRVTITCQASQDIKKYLNWYHQKPGKVPELLMHDASNLETGVPSRFSGRGSGTDFTLTISSLQPEDIGTYYCQQYDNLPPLTFGGGTKVEIKRTVRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
22.783632
25.224943
244
219
222
216
222
216
101
am14 fab heavy chain
am14 fab light chain
homo sapiens
homo sapiens
B;I
protein;protein
fusion glycoprotein f1,fibritin;fusion glycoprotein f1,fibritin
human respiratory syncytial virus;human respiratory syncytial virus
26;17
13;10
1.0;1.0
HL
train
7mmn_M_G
7mmn
crystal structure of the prefusion rsv f glycoprotein bound by human antibody am14
yes
immune system/viral protein
2021-04-29
2021-09-08
x-ray diffraction
3.57
0.245
0.202
34420474
10.1080/19420862.2021.1955812
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
M
G
CVQLVESGGGVVQPGRSLRLSCAASGFSFSHYAMHWVRQAPGKGLEWVAVISYDGENTYYADSVKGRFSISRDNSKNTVSLQMNSLRPEDTALYYCARDRIVDDYYYYGMDVWGQGATVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGSENLYFQGSHHHHHH
GDIQMTQSPSSLSASVGDRVTITCQASQDIKKYLNWYHQKPGKVPELLMHDASNLETGVPSRFSGRGSGTDFTLTISSLQPEDIGTYYCQQYDNLPPLTFGGGTKVEIKRTVRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLVESGGGVVQPGRSLRLSCAASGFSFSHYAMHWVRQAPGKGLEWVAVISYDGENTYYADSVKGRFSISRDNSKNTVSLQMNSLRPEDTALYYCARDRIVDDYYYYGMDVWGQGATVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIQMTQSPSSLSASVGDRVTITCQASQDIKKYLNWYHQKPGKVPELLMHDASNLETGVPSRFSGRGSGTDFTLTISSLQPEDIGTYYCQQYDNLPPLTFGGGTKVEIKRTVRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
22.814838
25.142744
244
219
222
216
222
216
97
am14 fab heavy chain
am14 fab light chain
homo sapiens
homo sapiens
B;K
protein;protein
fusion glycoprotein f1,fibritin;fusion glycoprotein f1,fibritin
human respiratory syncytial virus;human respiratory syncytial virus
16;27
9;15
1.0;1.0
HL
train
7mmn_H_L
7mmn
crystal structure of the prefusion rsv f glycoprotein bound by human antibody am14
yes
immune system/viral protein
2021-04-29
2021-09-08
x-ray diffraction
3.57
0.245
0.202
34420474
10.1080/19420862.2021.1955812
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
CVQLVESGGGVVQPGRSLRLSCAASGFSFSHYAMHWVRQAPGKGLEWVAVISYDGENTYYADSVKGRFSISRDNSKNTVSLQMNSLRPEDTALYYCARDRIVDDYYYYGMDVWGQGATVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGSENLYFQGSHHHHHH
GDIQMTQSPSSLSASVGDRVTITCQASQDIKKYLNWYHQKPGKVPELLMHDASNLETGVPSRFSGRGSGTDFTLTISSLQPEDIGTYYCQQYDNLPPLTFGGGTKVEIKRTVRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLVESGGGVVQPGRSLRLSCAASGFSFSHYAMHWVRQAPGKGLEWVAVISYDGENTYYADSVKGRFSISRDNSKNTVSLQMNSLRPEDTALYYCARDRIVDDYYYYGMDVWGQGATVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIQMTQSPSSLSASVGDRVTITCQASQDIKKYLNWYHQKPGKVPELLMHDASNLETGVPSRFSGRGSGTDFTLTISSLQPEDIGTYYCQQYDNLPPLTFGGGTKVEIKRTVRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
22.749893
25.374043
244
219
222
216
222
216
104
am14 fab heavy chain
am14 fab light chain
homo sapiens
homo sapiens
I;K
protein;protein
fusion glycoprotein f1,fibritin;fusion glycoprotein f1,fibritin
human respiratory syncytial virus;human respiratory syncytial virus
29;19
18;10
1.0;0.91
HL
train
7mlv_L_M
7mlv
cryo-em reveals partially and fully assembled native glycine receptors,homomeric tetramer
no
membrane protein, signaling protein
2021-04-29
2021-09-29
electron microscopy
4.1
N.A.
N.A.
34555840
10.1038/s41586-021-04022-z
0
auth_asym_id
VH:VL
IGHV1
IGKV1
L
M
QVQLQQSGAELMKPGAAVKISCKATGHTISRYWIDWLKQRPGHGLEWIGEILPGSGSTNYNEKFKGKATFTAEKSSNTAYMQLSSLTSEDSAVYYCAMGVRGNYFDYWGQGTTLTVSS
DIVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYWASTRHTGVPGRFTGSGSGTDYTLTISSVQAEDLSLYYCQQHYSTPRTFGGGTKLEIK
VQLQQSGAELMKPGAAVKISCKATGHTISRYWIDWLKQRPGHGLEWIGEILPGSGSTNYNEKFKGKATFTAEKSSNTAYMQLSSLTSEDSAVYYCAMGVRGNYFDYWGQGTTLTV
IVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYWASTRHTGVPGRFTGSGSGTDYTLTISSVQAEDLSLYYCQQHYSTPRTFGGGTKL
13.706905
13.22291
118
107
115
103
115
103
42
3d1 fab heavy chain
3d1 fab light chain
rattus norvegicus
rattus norvegicus
A;B
protein;protein
glycine receptor alpha 1;glycine receptor alpha 1
sus scrofa;sus scrofa
35;27
17;12
0.85;0.86
HL
train
7mlv_G_J
7mlv
cryo-em reveals partially and fully assembled native glycine receptors,homomeric tetramer
no
membrane protein, signaling protein
2021-04-29
2021-09-29
electron microscopy
4.1
N.A.
N.A.
34555840
10.1038/s41586-021-04022-z
0
auth_asym_id
VH:VL
IGHV1
IGKV1
G
J
QVQLQQSGAELMKPGAAVKISCKATGHTISRYWIDWLKQRPGHGLEWIGEILPGSGSTNYNEKFKGKATFTAEKSSNTAYMQLSSLTSEDSAVYYCAMGVRGNYFDYWGQGTTLTVSS
DIVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYWASTRHTGVPGRFTGSGSGTDYTLTISSVQAEDLSLYYCQQHYSTPRTFGGGTKLEIK
VQLQQSGAELMKPGAAVKISCKATGHTISRYWIDWLKQRPGHGLEWIGEILPGSGSTNYNEKFKGKATFTAEKSSNTAYMQLSSLTSEDSAVYYCAMGVRGNYFDYWGQGTTLTV
IVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYWASTRHTGVPGRFTGSGSGTDYTLTISSVQAEDLSLYYCQQHYSTPRTFGGGT
13.656929
13.129075
118
107
115
101
115
101
41
3d1 fab heavy chain
3d1 fab light chain
rattus norvegicus
rattus norvegicus
B;C
protein;protein
glycine receptor alpha 1;glycine receptor alpha 1
sus scrofa;sus scrofa
35;23
17;11
0.85;0.92
HL
train
7mlv_H_I
7mlv
cryo-em reveals partially and fully assembled native glycine receptors,homomeric tetramer
no
membrane protein, signaling protein
2021-04-29
2021-09-29
electron microscopy
4.1
N.A.
N.A.
34555840
10.1038/s41586-021-04022-z
0
auth_asym_id
VH:VL
IGHV1
IGKV1
H
I
QVQLQQSGAELMKPGAAVKISCKATGHTISRYWIDWLKQRPGHGLEWIGEILPGSGSTNYNEKFKGKATFTAEKSSNTAYMQLSSLTSEDSAVYYCAMGVRGNYFDYWGQGTTLTVSS
DIVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYWASTRHTGVPGRFTGSGSGTDYTLTISSVQAEDLSLYYCQQHYSTPRTFGGGTKLEIK
VQLQQSGAELMKPGAAVKISCKATGHTISRYWIDWLKQRPGHGLEWIGEILPGSGSTNYNEKFKGKATFTAEKSSNTAYMQLSSLTSEDSAVYYCAMGVRGNYFDYWGQGTTLTV
IVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYWASTRHTGVPGRFTGSGSGTDYTLTISSVQAEDLSLYYCQQHYSTPRTFGGGTKL
13.704693
13.218818
118
107
115
103
115
103
41
3d1 fab heavy chain
3d1 fab light chain
rattus norvegicus
rattus norvegicus
C;D
protein;protein
glycine receptor alpha 1;glycine receptor alpha 1
sus scrofa;sus scrofa
38;23
19;12
0.9;0.92
HL
train
7mlv_F_K
7mlv
cryo-em reveals partially and fully assembled native glycine receptors,homomeric tetramer
no
membrane protein, signaling protein
2021-04-29
2021-09-29
electron microscopy
4.1
N.A.
N.A.
34555840
10.1038/s41586-021-04022-z
0
auth_asym_id
VH:VL
IGHV1
IGKV1
F
K
QVQLQQSGAELMKPGAAVKISCKATGHTISRYWIDWLKQRPGHGLEWIGEILPGSGSTNYNEKFKGKATFTAEKSSNTAYMQLSSLTSEDSAVYYCAMGVRGNYFDYWGQGTTLTVSS
DIVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYWASTRHTGVPGRFTGSGSGTDYTLTISSVQAEDLSLYYCQQHYSTPRTFGGGTKLEIK
VQLQQSGAELMKPGAAVKISCKATGHTISRYWIDWLKQRPGHGLEWIGEILPGSGSTNYNEKFKGKATFTAEKSSNTAYMQLSSLTSEDSAVYYCAMGVRGNYFDYWGQGTTLTV
IVMTQSHKFMSTSVGDRVSITCKASQDVSTAVAWYQQKPGQSPKLLIYWASTRHTGVPGRFTGSGSGTDYTLTISSVQAEDLSLYYCQQHYSTPRTFGGGTK
13.711667
13.325438
118
107
115
102
115
102
34
3d1 fab heavy chain
3d1 fab light chain
rattus norvegicus
rattus norvegicus
D
protein
glycine receptor alpha 1
sus scrofa
33
14
0.88
HL
train
7eq3_A
7eq3
apo diabody form of crh2-directed antibody 9f8
no
immune system
2021-04-29
2022-05-18
x-ray diffraction
2.87
0.247
0.238
N.A.
N.A.
0
auth_asym_id
VHVL
N.A.
N.A.
A
N.A.
AEVKLLESGPGLVAPSESLSITCTISGFSLTDDGVSWIRQPPGKGLEWLGVIWGGGSTYFNSLFKSRLSITRDNSKSQVFLEMDSLQTDDTAMYYCAKHDGHETMDYWGQGTSVTVSSGGGGSEIVMTQSPKFMSTSIGDRVNITCKATQNVRTAVTWYQQKPGQSPQALIFLASNRHTGVPARFTGSGSGTDFTLTINNVKSEDLADYFCLQHWNYPLTFGSGTKLEIK
N.A.
EVKLLESGPGLVAPSESLSITCTISGFSLTDDGVSWIRQPPGKGLEWLGVIWGGGSTYFNSLFKSRLSITRDNSKSQVFLEMDSLQTDDTAMYYCAKHDGHETMDYWGQGTSVTVSSGGGGSEIVMTQSPKFMSTSIGDRVNITCKATQNVRTAVTWYQQKPGQSPQALIFLASNRHTGVPARFTGSGSGTDFTLTINNVKSEDLADYFCLQHWNYPLTFGSGTKLEIK
N.A.
23.084604
0
230
0
229
0
229
0
0
9f8 diabody
N.A.
mus musculus
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
7mnl_H_L
7mnl
crystal structure of the n-terminal domain of nup358/ranbp2 (residues 1-752) in complex with fab fragment
yes
transferase/immune system
2021-05-01
2022-06-15
x-ray diffraction
3.95
0.241
0.192
35679405
10.1126/science.abm9129
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EISEVQLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASIYSYSGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSPWRWSGVSDGGFYYKALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASIYSYSGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSPWRWSGVSDGGFYYKALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
23.165201
22.62097
240
215
227
213
227
213
106
antibody fab14 heavy chain
antibody fab14 light chain
homo sapiens
homo sapiens
A
protein
e3 sumo-protein ligase ranbp2
homo sapiens
45
16
0.67
HL
train
7mnl_K_M
7mnl
crystal structure of the n-terminal domain of nup358/ranbp2 (residues 1-752) in complex with fab fragment
yes
transferase/immune system
2021-05-01
2022-06-15
x-ray diffraction
3.95
0.241
0.192
35679405
10.1126/science.abm9129
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
K
M
EISEVQLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASIYSYSGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSPWRWSGVSDGGFYYKALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASIYSYSGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSPWRWSGVSDGGFYYKALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
23.299774
22.472906
240
215
227
212
227
212
106
antibody fab14 heavy chain
antibody fab14 light chain
homo sapiens
homo sapiens
B
protein
e3 sumo-protein ligase ranbp2
homo sapiens
39
16
0.73
HL
train
7mnm_H_L
7mnm
crystal structure of the n-terminal domain of nup358/ranbp2 (residues 1-752) t585m mutant in complex with fab fragment
yes
transport protein/immune system
2021-05-01
2022-06-15
x-ray diffraction
4.7
0.254
0.204
35679405
10.1126/science.abm9129
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EISEVQLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASIYSYSGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSPWRWSGVSDGGFYYKALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASIYSYSGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSPWRWSGVSDGGFYYKALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
23.18159
22.62905
240
215
227
213
227
213
105
antibody fab14 heavy chain
antibody fab14 light chain
homo sapiens
homo sapiens
A
protein
e3 sumo-protein ligase ranbp2
homo sapiens
48
16
0.67
HL
train
7mnm_K_M
7mnm
crystal structure of the n-terminal domain of nup358/ranbp2 (residues 1-752) t585m mutant in complex with fab fragment
yes
transport protein/immune system
2021-05-01
2022-06-15
x-ray diffraction
4.7
0.254
0.204
35679405
10.1126/science.abm9129
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
K
M
EISEVQLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASIYSYSGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSPWRWSGVSDGGFYYKALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASIYSYSGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSPWRWSGVSDGGFYYKALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
23.316765
22.56
240
215
227
213
227
213
107
antibody fab14 heavy chain
antibody fab14 light chain
homo sapiens
homo sapiens
B
protein
e3 sumo-protein ligase ranbp2
homo sapiens
42
16
0.73
HL
train
7oh0_C_B
7oh0
tetanus neurotoxin hc domain in complex with tt104-fab1
no
toxin
2021-05-07
2021-10-27
electron microscopy
3.9
N.A.
N.A.
34618682
10.1172/JCI151676
0
auth_asym_id
FabH:FabL
IGHV4
IGKV3
C
B
QLQLQESGPGLVRPSETLSLTCSVSDDSMGSSTYYWAWIRQPPGKGLEWIGNVYYNGVTYYNSSLESRLTLSIDPSKNQFSLILSSVTAADTAVYYCARQADNWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
IMMTQSPATLSVSPGERATLSCRASQSVGSDLAWYQQKPGQAPRLLIYGASYRATGIPARFSGGGSGTEFTLTISSMQSEDFAVYYCQQYYNWPPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QLQLQESGPGLVRPSETLSLTCSVSDDSMGSSTYYWAWIRQPPGKGLEWIGNVYYNGVTYYNSSLESRLTLSIDPSKNQFSLILSSVTAADTAVYYCARQADNWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
IMMTQSPATLSVSPGERATLSCRASQSVGSDLAWYQQKPGQAPRLLIYGASYRATGIPARFSGGGSGTEFTLTISSMQSEDFAVYYCQQYYNWPPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
23.322031
22.936651
221
214
221
214
221
214
98
fab tt104
fab tt104
homo sapiens
homo sapiens
A
protein
tetanus toxin
clostridium tetani
49
20
0.83
HL
train
7oh1_E_D
7oh1
tetanus neurotoxin lc-hn domain in complex with tt110-fab1
no
toxin
2021-05-07
2021-10-27
electron microscopy
8
N.A.
N.A.
34618682
10.1172/JCI151676
0
auth_asym_id
FabH:FabL
IGHV1
IGKV3
E
D
QVQLMQSGAEVQKPGASVKVSCQASGFTLNNYYIHWLRQAPGQGFEWMGIFNPSSGTRTYAQKFQGRISMTADASTTTLYMELSGLTSEDAGVYFCARIGGSTYGRLMTYYFDHWGQGTVVAVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
VLTQGPVTLSVSPGGRGTLSCRASRSISTTLAWYQQKPGQAPRLLIYGASTRATGIPARFTGSGSGTEFTLTISSLQSEDFAVYYCQQYNDWPVTFGQGTQVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLMQSGAEVQKPGASVKVSCQASGFTLNNYYIHWLRQAPGQGFEWMGIFNPSSGTRTYAQKFQGRISMTADASTTTLYMELSGLTSEDAGVYFCARIGGSTYGRLMTYYFDHWGQGTVVAVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
VLTQGPVTLSVSPGGRGTLSCRASRSISTTLAWYQQKPGQAPRLLIYGASTRATGIPARFTGSGSGTEFTLTISSLQSEDFAVYYCQQYNDWPVTFGQGTQVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
23.857212
23.784382
228
212
228
212
228
212
87
fab tt110
fab tt110
homo sapiens
homo sapiens
A
protein
tetanus toxin
clostridium tetani
60
20
0.65
HL
train
7mrz_X_Y
7mrz
structure of gdf11 bound to fused actriib-ecd and alk4-ecd with anti-actriib fab fragment
no
signaling protein/immune system
2021-05-10
2022-01-19
x-ray diffraction
3
0.327
0.288
35005539
10.1016/j.isci.2021.103590
0
auth_asym_id
FabH:FabL
IGHV4
IGKV4
X
Y
QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSISYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARDSLRYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYALAPPRTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QLQLQESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSISYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARDSLRYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYALAPPRTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
21.341694
24.228731
222
221
222
221
222
221
109
fab heavy chain
fab light chain
homo sapiens
homo sapiens
C
protein
activin receptor type-2b,activin receptor type-1b
homo sapiens
42
16
0.84
HL
train
7msq_H_L
7msq
complex between the fab arm of ab-3467 and the sars-cov-2 receptor binding domain (rbd)
no
viral protein/antiviral protein
2021-05-12
2022-01-19
x-ray diffraction
2.29
0.245
0.194
34788600
10.1016/j.immuni.2021.10.019
0
auth_asym_id
FabH:FabL
IGHV4
IGKV1
H
L
QVQLQESGPGLVKPSETLSLTCTVSGGSISSYHWNWIRQPPGKGLEWIGYIYYSGNTNYNPSLKSRVSISTDTSKNQFSLKLSSVTAADTAVYYCVREMRRGYSGYDYWDLYAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHH
DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPNLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPHTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLQESGPGLVKPSETLSLTCTVSGGSISSYHWNWIRQPPGKGLEWIGYIYYSGNTNYNPSLKSRVSISTDTSKNQFSLKLSSVTAADTAVYYCVREMRRGYSGYDYWDLYAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPNLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPHTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
21.27578
23.403334
238
214
221
214
228
214
95
ab-3467 fab heavy chain
ab-3467 fab light chain
homo sapiens
homo sapiens
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
35
15
1
HL
train
7msq_D_E
7msq
complex between the fab arm of ab-3467 and the sars-cov-2 receptor binding domain (rbd)
no
viral protein/antiviral protein
2021-05-12
2022-01-19
x-ray diffraction
2.29
0.245
0.194
34788600
10.1016/j.immuni.2021.10.019
0
auth_asym_id
FabH:FabL
IGHV4
IGKV1
D
E
QVQLQESGPGLVKPSETLSLTCTVSGGSISSYHWNWIRQPPGKGLEWIGYIYYSGNTNYNPSLKSRVSISTDTSKNQFSLKLSSVTAADTAVYYCVREMRRGYSGYDYWDLYAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHH
DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPNLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPHTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLQESGPGLVKPSETLSLTCTVSGGSISSYHWNWIRQPPGKGLEWIGYIYYSGNTNYNPSLKSRVSISTDTSKNQFSLKLSSVTAADTAVYYCVREMRRGYSGYDYWDLYAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPNLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPHTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
21.298935
23.205957
238
214
221
213
228
213
92
ab-3467 fab heavy chain
ab-3467 fab light chain
homo sapiens
homo sapiens
B
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
34
15
1
HL
train
7mta_H_L
7mta
rhodopsin kinase (grk1)-s5e/s488e/t489e in complex with rhodopsin and fab1
yes
membrane, signaling protein/immune system
2021-05-13
2021-07-07
electron microscopy
4.1
N.A.
N.A.
34262173
10.1038/s41586-021-03721-x
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EISEVQLVESGGGLVQPGGSLRLSCAASGFNLYSSSIHWVRQAPGKGLEWVASIYSYYGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYEGWWWANTYALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYYEWLSLFTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFNLYSSSIHWVRQAPGKGLEWVASIYSYYGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYEGWWWANTYALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYYEWLSLFTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
23.630209
23.00528
234
217
223
215
223
215
114
fab1 heavy chain
fab1 light chain
homo sapiens
homo sapiens
G
protein
rhodopsin kinase grk1
bos taurus
31
14
1
HL
train
7mta_H_L
7mta
rhodopsin kinase (grk1)-s5e/s488e/t489e in complex with rhodopsin and fab1
yes
membrane, signaling protein/immune system
2021-05-13
2021-07-07
electron microscopy
4.1
N.A.
N.A.
34262173
10.1038/s41586-021-03721-x
1
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EISEVQLVESGGGLVQPGGSLRLSCAASGFNLYSSSIHWVRQAPGKGLEWVASIYSYYGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYEGWWWANTYALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYYEWLSLFTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFNLYSSSIHWVRQAPGKGLEWVASIYSYYGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYEGWWWANTYALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYYEWLSLFTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
23.712408
22.987463
234
217
223
215
223
215
116
fab1 heavy chain
fab1 light chain
homo sapiens
homo sapiens
G
protein
rhodopsin kinase grk1
bos taurus
33
17
1
HL
train
7mta_H_L
7mta
rhodopsin kinase (grk1)-s5e/s488e/t489e in complex with rhodopsin and fab1
yes
membrane, signaling protein/immune system
2021-05-13
2021-07-07
electron microscopy
4.1
N.A.
N.A.
34262173
10.1038/s41586-021-03721-x
2
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EISEVQLVESGGGLVQPGGSLRLSCAASGFNLYSSSIHWVRQAPGKGLEWVASIYSYYGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYEGWWWANTYALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYYEWLSLFTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFNLYSSSIHWVRQAPGKGLEWVASIYSYYGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYEGWWWANTYALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYYEWLSLFTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
23.720543
22.972422
234
217
223
215
223
215
114
fab1 heavy chain
fab1 light chain
homo sapiens
homo sapiens
G
protein
rhodopsin kinase grk1
bos taurus
33
17
1
HL
train
7mta_H_L
7mta
rhodopsin kinase (grk1)-s5e/s488e/t489e in complex with rhodopsin and fab1
yes
membrane, signaling protein/immune system
2021-05-13
2021-07-07
electron microscopy
4.1
N.A.
N.A.
34262173
10.1038/s41586-021-03721-x
3
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EISEVQLVESGGGLVQPGGSLRLSCAASGFNLYSSSIHWVRQAPGKGLEWVASIYSYYGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYEGWWWANTYALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYYEWLSLFTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFNLYSSSIHWVRQAPGKGLEWVASIYSYYGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYEGWWWANTYALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYYEWLSLFTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
23.688274
22.999613
234
217
223
215
223
215
116
fab1 heavy chain
fab1 light chain
homo sapiens
homo sapiens
G
protein
rhodopsin kinase grk1
bos taurus
32
16
1
HL
train
7mta_H_L
7mta
rhodopsin kinase (grk1)-s5e/s488e/t489e in complex with rhodopsin and fab1
yes
membrane, signaling protein/immune system
2021-05-13
2021-07-07
electron microscopy
4.1
N.A.
N.A.
34262173
10.1038/s41586-021-03721-x
4
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EISEVQLVESGGGLVQPGGSLRLSCAASGFNLYSSSIHWVRQAPGKGLEWVASIYSYYGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYEGWWWANTYALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYYEWLSLFTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFNLYSSSIHWVRQAPGKGLEWVASIYSYYGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYEGWWWANTYALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYYEWLSLFTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
23.726395
22.980125
234
217
223
215
223
215
112
fab1 heavy chain
fab1 light chain
homo sapiens
homo sapiens
G
protein
rhodopsin kinase grk1
bos taurus
32
16
1
HL
train
7mta_H_L
7mta
rhodopsin kinase (grk1)-s5e/s488e/t489e in complex with rhodopsin and fab1
yes
membrane, signaling protein/immune system
2021-05-13
2021-07-07
electron microscopy
4.1
N.A.
N.A.
34262173
10.1038/s41586-021-03721-x
5
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EISEVQLVESGGGLVQPGGSLRLSCAASGFNLYSSSIHWVRQAPGKGLEWVASIYSYYGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYEGWWWANTYALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYYEWLSLFTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFNLYSSSIHWVRQAPGKGLEWVASIYSYYGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYEGWWWANTYALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYYEWLSLFTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
23.691315
23.008295
234
217
223
215
223
215
109
fab1 heavy chain
fab1 light chain
homo sapiens
homo sapiens
G
protein
rhodopsin kinase grk1
bos taurus
36
18
1
HL
train
7mub_A_B
7mub
kcsa open gate e71v mutant in potassium
yes
membrane protein
2021-05-14
2022-03-23
x-ray diffraction
3
0.26
0.197
35322021
10.1038/s41467-022-28866-9
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
A
B
EISEVQLVESGGGLVQPGGSLRLSCAASGYTFTSDWIHWVRQAPGKGLEWIGEIIPSYGRANYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARERGDGYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
SDIQMTQSPSSLSASVGDRVTITCRASQSIGTDIHWYQQKPGKAPKLLIKYASESISGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSNRWPFTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLVESGGGLVQPGGSLRLSCAASGYTFTSDWIHWVRQAPGKGLEWIGEIIPSYGRANYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARERGDGYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIQMTQSPSSLSASVGDRVTITCRASQSIGTDIHWYQQKPGKAPKLLIKYASESISGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSNRWPFTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVT
20.592165
22.976595
229
215
208
194
217
197
87
fab heavy chain
fab light chain
synthetic construct
synthetic construct
C
protein
ph-gated potassium channel kcsa
streptomyces lividans
41
18
0.78
HL
train
7mw3_D_E
7mw3
structure of the sars-cov-2 spike trimer with two rbds down in complex with the fab fragment of human neutralizing antibody clone 6
no
viral protein/immune system
2021-05-15
2022-03-16
electron microscopy
3.15
N.A.
N.A.
35347138
10.1038/s41467-022-29288-3
0
auth_asym_id
FabH:FabL
IGHV1
IGKV7
D
E
MERHWIFLFLLSVTAGVHSQVQLQQSAAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPTSGYTEYNQNFKDKTTLTADKSSSTAYMQLNSLTSEDSAVYYCAREGHRVGPAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
MEKDTLLLWVLLLWVPGSTGDIVLTQSPASLAVSLGQRATISCRASESVDNYGISFMNWFQQTPGQPPKLLIYGSSNQGSGVPARFSGSGSGTDFSLNIHPMEEDDTAMYFCQQSKEVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEA
VQLQQSAAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPTSGYTEYNQNFKDKTTLTADKSSSTAYMQLNSLTSEDSAVYYCAREGHRVGPAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
IVLTQSPASLAVSLGQRATISCRASESVDNYGISFMNWFQQTPGQPPKLLIYGSSNQGSGVPARFSGSGSGTDFSLNIHPMEEDDTAMYFCQQSKEVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
22.30381
23.014252
237
238
212
215
217
215
95
fab of antibody clone 6, heavy chain
fab of antibody clone 6, light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
48
19
0.68
HL
train
7mw3_F_G
7mw3
structure of the sars-cov-2 spike trimer with two rbds down in complex with the fab fragment of human neutralizing antibody clone 6
no
viral protein/immune system
2021-05-15
2022-03-16
electron microscopy
3.15
N.A.
N.A.
35347138
10.1038/s41467-022-29288-3
0
auth_asym_id
FabH:FabL
IGHV1
IGKV7
F
G
MERHWIFLFLLSVTAGVHSQVQLQQSAAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPTSGYTEYNQNFKDKTTLTADKSSSTAYMQLNSLTSEDSAVYYCAREGHRVGPAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
MEKDTLLLWVLLLWVPGSTGDIVLTQSPASLAVSLGQRATISCRASESVDNYGISFMNWFQQTPGQPPKLLIYGSSNQGSGVPARFSGSGSGTDFSLNIHPMEEDDTAMYFCQQSKEVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEA
VQLQQSAAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPTSGYTEYNQNFKDKTTLTADKSSSTAYMQLNSLTSEDSAVYYCAREGHRVGPAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
IVLTQSPASLAVSLGQRATISCRASESVDNYGISFMNWFQQTPGQPPKLLIYGSSNQGSGVPARFSGSGSGTDFSLNIHPMEEDDTAMYFCQQSKEVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
22.33058
23.049662
237
238
212
215
217
215
94
fab of antibody clone 6, heavy chain
fab of antibody clone 6, light chain
homo sapiens
homo sapiens
A;B
protein;protein
spike glycoprotein;spike glycoprotein
severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2
27;52
7;20
0.44;0.67
HL
train
7mw3_H_L
7mw3
structure of the sars-cov-2 spike trimer with two rbds down in complex with the fab fragment of human neutralizing antibody clone 6
no
viral protein/immune system
2021-05-15
2022-03-16
electron microscopy
3.15
N.A.
N.A.
35347138
10.1038/s41467-022-29288-3
0
auth_asym_id
FabH:FabL
IGHV1
IGKV7
H
L
MERHWIFLFLLSVTAGVHSQVQLQQSAAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPTSGYTEYNQNFKDKTTLTADKSSSTAYMQLNSLTSEDSAVYYCAREGHRVGPAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
MEKDTLLLWVLLLWVPGSTGDIVLTQSPASLAVSLGQRATISCRASESVDNYGISFMNWFQQTPGQPPKLLIYGSSNQGSGVPARFSGSGSGTDFSLNIHPMEEDDTAMYFCQQSKEVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEA
VQLQQSAAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPTSGYTEYNQNFKDKTTLTADKSSSTAYMQLNSLTSEDSAVYYCAREGHRVGPAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
IVLTQSPASLAVSLGQRATISCRASESVDNYGISFMNWFQQTPGQPPKLLIYGSSNQGSGVPARFSGSGSGTDFSLNIHPMEEDDTAMYFCQQSKEVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
22.289474
23.022812
237
238
212
215
217
215
97
fab of antibody clone 6, heavy chain
fab of antibody clone 6, light chain
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
47
16
0.64
HL
train
7mw4_D_E
7mw4
structure of the sars-cov-2 spike trimer with one rbd down in complex with the fab fragment of human neutralizing antibody clone 6
no
viral protein/immune system
2021-05-15
2022-03-16
electron microscopy
3.42
N.A.
N.A.
35347138
10.1038/s41467-022-29288-3
0
auth_asym_id
FabH:FabL
IGHV1
IGKV7
D
E
MERHWIFLFLLSVTAGVHSQVQLQQSAAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPTSGYTEYNQNFKDKTTLTADKSSSTAYMQLNSLTSEDSAVYYCAREGHRVGPAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
MEKDTLLLWVLLLWVPGSTGDIVLTQSPASLAVSLGQRATISCRASESVDNYGISFMNWFQQTPGQPPKLLIYGSSNQGSGVPARFSGSGSGTDFSLNIHPMEEDDTAMYFCQQSKEVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEA
VQLQQSAAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPTSGYTEYNQNFKDKTTLTADKSSSTAYMQLNSLTSEDSAVYYCAREGHRVGPAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
IVLTQSPASLAVSLGQRATISCRASESVDNYGISFMNWFQQTPGQPPKLLIYGSSNQGSGVPARFSGSGSGTDFSLNIHPMEEDDTAMYFCQQSKEVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
22.308285
23.023834
237
238
212
215
217
215
98
fab of antibody clone 6, heavy chain
fab of antibody clone 6, light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
50
19
0.66
HL
train
7mw4_F_G
7mw4
structure of the sars-cov-2 spike trimer with one rbd down in complex with the fab fragment of human neutralizing antibody clone 6
no
viral protein/immune system
2021-05-15
2022-03-16
electron microscopy
3.42
N.A.
N.A.
35347138
10.1038/s41467-022-29288-3
0
auth_asym_id
FabH:FabL
IGHV1
IGKV7
F
G
MERHWIFLFLLSVTAGVHSQVQLQQSAAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPTSGYTEYNQNFKDKTTLTADKSSSTAYMQLNSLTSEDSAVYYCAREGHRVGPAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
MEKDTLLLWVLLLWVPGSTGDIVLTQSPASLAVSLGQRATISCRASESVDNYGISFMNWFQQTPGQPPKLLIYGSSNQGSGVPARFSGSGSGTDFSLNIHPMEEDDTAMYFCQQSKEVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEA
VQLQQSAAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPTSGYTEYNQNFKDKTTLTADKSSSTAYMQLNSLTSEDSAVYYCAREGHRVGPAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
IVLTQSPASLAVSLGQRATISCRASESVDNYGISFMNWFQQTPGQPPKLLIYGSSNQGSGVPARFSGSGSGTDFSLNIHPMEEDDTAMYFCQQSKEVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
22.320194
23.03061
237
238
212
215
217
215
97
fab of antibody clone 6, heavy chain
fab of antibody clone 6, light chain
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
47
20
0.74
HL
train
7mw4_H_L
7mw4
structure of the sars-cov-2 spike trimer with one rbd down in complex with the fab fragment of human neutralizing antibody clone 6
no
viral protein/immune system
2021-05-15
2022-03-16
electron microscopy
3.42
N.A.
N.A.
35347138
10.1038/s41467-022-29288-3
0
auth_asym_id
FabH:FabL
IGHV1
IGKV7
H
L
MERHWIFLFLLSVTAGVHSQVQLQQSAAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPTSGYTEYNQNFKDKTTLTADKSSSTAYMQLNSLTSEDSAVYYCAREGHRVGPAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
MEKDTLLLWVLLLWVPGSTGDIVLTQSPASLAVSLGQRATISCRASESVDNYGISFMNWFQQTPGQPPKLLIYGSSNQGSGVPARFSGSGSGTDFSLNIHPMEEDDTAMYFCQQSKEVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEA
VQLQQSAAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPTSGYTEYNQNFKDKTTLTADKSSSTAYMQLNSLTSEDSAVYYCAREGHRVGPAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
IVLTQSPASLAVSLGQRATISCRASESVDNYGISFMNWFQQTPGQPPKLLIYGSSNQGSGVPARFSGSGSGTDFSLNIHPMEEDDTAMYFCQQSKEVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
22.325224
23.04521
237
238
212
215
217
215
94
fab of antibody clone 6, heavy chain
fab of antibody clone 6, light chain
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
43
15
0.62
HL
train
7mw5_D_E
7mw5
structure of the sars-cov-2 spike trimer with one rbd down in complex with the fab fragment of human neutralizing antibody clone 2
no
viral protein/immune system
2021-05-15
2022-03-16
electron microscopy
3.42
N.A.
N.A.
35347138
10.1038/s41467-022-29288-3
0
auth_asym_id
VH:VL
IGHV1
IGKV7
D
E
MGWNWIFILILSVTTGVHSEVQLQQSGPELVKPGASVKISCKASGYSFTGYSMNWMKQSPEKSLEWIGEINPSTGGTTDNQKFKAKATLTVDKSSSTAYMQLKSLTSEDSAVYYCARSRGDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
MESDTLLLWVLLLWVPGSTGDIVLTQSPASLAVSLGQRATISCRASESVEYYGTSLMQWYQQKPGQPPKVLIYAASNVESGVPARFSGSGSGTDFSLNIHPVEEDDIAMYFCQQSRKVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEA
VQLQQSGPELVKPGASVKISCKASGYSFTGYSMNWMKQSPEKSLEWIGEINPSTGGTTDNQKFKAKATLTVDKSSSTAYMQLKSLTSEDSAVYYCARSRGDYWGQGTSVTVSS
IVLTQSPASLAVSLGQRATISCRASESVEYYGTSLMQWYQQKPGQPPKVLIYAASNVESGVPARFSGSGSGTDFSLNIHPVEEDDIAMYFCQQSRKVPWTFGGGTKLEIK
13.420063
13.780187
263
265
113
110
113
110
43
fab of antibody clone 2, heavy chain
fab of antibody clone 2, light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
46
19
0.7
HL
train
7mw5_F_G
7mw5
structure of the sars-cov-2 spike trimer with one rbd down in complex with the fab fragment of human neutralizing antibody clone 2
no
viral protein/immune system
2021-05-15
2022-03-16
electron microscopy
3.42
N.A.
N.A.
35347138
10.1038/s41467-022-29288-3
0
auth_asym_id
FabH:FabL
IGHV1
IGKV7
F
G
MGWNWIFILILSVTTGVHSEVQLQQSGPELVKPGASVKISCKASGYSFTGYSMNWMKQSPEKSLEWIGEINPSTGGTTDNQKFKAKATLTVDKSSSTAYMQLKSLTSEDSAVYYCARSRGDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
MESDTLLLWVLLLWVPGSTGDIVLTQSPASLAVSLGQRATISCRASESVEYYGTSLMQWYQQKPGQPPKVLIYAASNVESGVPARFSGSGSGTDFSLNIHPVEEDDIAMYFCQQSRKVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEA
VQLQQSGPELVKPGASVKISCKASGYSFTGYSMNWMKQSPEKSLEWIGEINPSTGGTTDNQKFKAKATLTVDKSSSTAYMQLKSLTSEDSAVYYCARSRGDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
IVLTQSPASLAVSLGQRATISCRASESVEYYGTSLMQWYQQKPGQPPKVLIYAASNVESGVPARFSGSGSGTDFSLNIHPVEEDDIAMYFCQQSRKVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
21.939762
22.621304
263
265
209
215
243
242
92
fab of antibody clone 2, heavy chain
fab of antibody clone 2, light chain
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
52
20
0.71
HL
train
7mw5_H_L
7mw5
structure of the sars-cov-2 spike trimer with one rbd down in complex with the fab fragment of human neutralizing antibody clone 2
no
viral protein/immune system
2021-05-15
2022-03-16
electron microscopy
3.42
N.A.
N.A.
35347138
10.1038/s41467-022-29288-3
0
auth_asym_id
FabH:FabL
IGHV1
IGKV7
H
L
MGWNWIFILILSVTTGVHSEVQLQQSGPELVKPGASVKISCKASGYSFTGYSMNWMKQSPEKSLEWIGEINPSTGGTTDNQKFKAKATLTVDKSSSTAYMQLKSLTSEDSAVYYCARSRGDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
MESDTLLLWVLLLWVPGSTGDIVLTQSPASLAVSLGQRATISCRASESVEYYGTSLMQWYQQKPGQPPKVLIYAASNVESGVPARFSGSGSGTDFSLNIHPVEEDDIAMYFCQQSRKVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEA
VQLQQSGPELVKPGASVKISCKASGYSFTGYSMNWMKQSPEKSLEWIGEINPSTGGTTDNQKFKAKATLTVDKSSSTAYMQLKSLTSEDSAVYYCARSRGDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
IVLTQSPASLAVSLGQRATISCRASESVEYYGTSLMQWYQQKPGQPPKVLIYAASNVESGVPARFSGSGSGTDFSLNIHPVEEDDIAMYFCQQSRKVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
21.91935
22.635736
263
265
209
215
243
242
92
fab of antibody clone 2, heavy chain
fab of antibody clone 2, light chain
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
52
20
0.67
HL
train
7mw6_D_E
7mw6
structure of the sars-cov-2 spike trimer with three rbds up in complex with the fab fragment of human neutralizing antibody clone 2
no
viral protein/immune system
2021-05-15
2022-03-16
electron microscopy
3.22
N.A.
N.A.
35347138
10.1038/s41467-022-29288-3
0
auth_asym_id
FabH:FabL
IGHV1
IGKV7
D
E
MGWNWIFILILSVTTGVHSEVQLQQSGPELVKPGASVKISCKASGYSFTGYSMNWMKQSPEKSLEWIGEINPSTGGTTDNQKFKAKATLTVDKSSSTAYMQLKSLTSEDSAVYYCARSRGDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
MESDTLLLWVLLLWVPGSTGDIVLTQSPASLAVSLGQRATISCRASESVEYYGTSLMQWYQQKPGQPPKVLIYAASNVESGVPARFSGSGSGTDFSLNIHPVEEDDIAMYFCQQSRKVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEA
VQLQQSGPELVKPGASVKISCKASGYSFTGYSMNWMKQSPEKSLEWIGEINPSTGGTTDNQKFKAKATLTVDKSSSTAYMQLKSLTSEDSAVYYCARSRGDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
IVLTQSPASLAVSLGQRATISCRASESVEYYGTSLMQWYQQKPGQPPKVLIYAASNVESGVPARFSGSGSGTDFSLNIHPVEEDDIAMYFCQQSRKVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
22.040316
22.784338
263
265
209
215
243
242
92
fab of antibody clone 2, heavy chain
fab of antibody clone 2, light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
46
20
0.77
HL
train
7mw6_F_G
7mw6
structure of the sars-cov-2 spike trimer with three rbds up in complex with the fab fragment of human neutralizing antibody clone 2
no
viral protein/immune system
2021-05-15
2022-03-16
electron microscopy
3.22
N.A.
N.A.
35347138
10.1038/s41467-022-29288-3
0
auth_asym_id
FabH:FabL
IGHV1
IGKV7
F
G
MGWNWIFILILSVTTGVHSEVQLQQSGPELVKPGASVKISCKASGYSFTGYSMNWMKQSPEKSLEWIGEINPSTGGTTDNQKFKAKATLTVDKSSSTAYMQLKSLTSEDSAVYYCARSRGDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
MESDTLLLWVLLLWVPGSTGDIVLTQSPASLAVSLGQRATISCRASESVEYYGTSLMQWYQQKPGQPPKVLIYAASNVESGVPARFSGSGSGTDFSLNIHPVEEDDIAMYFCQQSRKVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEA
VQLQQSGPELVKPGASVKISCKASGYSFTGYSMNWMKQSPEKSLEWIGEINPSTGGTTDNQKFKAKATLTVDKSSSTAYMQLKSLTSEDSAVYYCARSRGDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
IVLTQSPASLAVSLGQRATISCRASESVEYYGTSLMQWYQQKPGQPPKVLIYAASNVESGVPARFSGSGSGTDFSLNIHPVEEDDIAMYFCQQSRKVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
22.017227
22.764143
263
265
209
215
243
242
86
fab of antibody clone 2, heavy chain
fab of antibody clone 2, light chain
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
52
22
0.71
HL
train
7mw6_H_L
7mw6
structure of the sars-cov-2 spike trimer with three rbds up in complex with the fab fragment of human neutralizing antibody clone 2
no
viral protein/immune system
2021-05-15
2022-03-16
electron microscopy
3.22
N.A.
N.A.
35347138
10.1038/s41467-022-29288-3
0
auth_asym_id
FabH:FabL
IGHV1
IGKV7
H
L
MGWNWIFILILSVTTGVHSEVQLQQSGPELVKPGASVKISCKASGYSFTGYSMNWMKQSPEKSLEWIGEINPSTGGTTDNQKFKAKATLTVDKSSSTAYMQLKSLTSEDSAVYYCARSRGDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
MESDTLLLWVLLLWVPGSTGDIVLTQSPASLAVSLGQRATISCRASESVEYYGTSLMQWYQQKPGQPPKVLIYAASNVESGVPARFSGSGSGTDFSLNIHPVEEDDIAMYFCQQSRKVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEA
VQLQQSGPELVKPGASVKISCKASGYSFTGYSMNWMKQSPEKSLEWIGEINPSTGGTTDNQKFKAKATLTVDKSSSTAYMQLKSLTSEDSAVYYCARSRGDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
IVLTQSPASLAVSLGQRATISCRASESVEYYGTSLMQWYQQKPGQPPKVLIYAASNVESGVPARFSGSGSGTDFSLNIHPVEEDDIAMYFCQQSRKVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
22.013493
22.7718
263
265
209
215
243
242
90
fab of antibody clone 2, heavy chain
fab of antibody clone 2, light chain
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
50
19
0.7
HL
train
7mww_H_L
7mww
structure of hepatitis c virus envelope full-length glycoprotein 2 (ee2) from j6 genotype
no
viral protein/immune system
2021-05-17
2021-09-15
x-ray diffraction
2.71
0.27
0.218
34526719
10.1038/s41586-021-03913-5
0
auth_asym_id
FabH:FabL
IGHV1
IGKV4
H
L
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYIHWVNQRPEQGLEWIGRIDPANGHTQYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCATSDYSYALDSWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGPT
MESQTQVLMFLLLWVSGACADIVMTQSPSSLAMSVGQKVTMSCKSSQSLLNSNNQKNYLAWYQQKPGQSPKLLVYFASTRESGVPDRFIGSGSGTDFTLTISSVQAEDLADYFCQQHYSTPYTFGGGTKLEIRRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYIHWVNQRPEQGLEWIGRIDPANGHTQYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCATSDYSYALDSWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRG
DIVMTQSPSSLAMSVGQKVTMSCKSSQSLLNSNNQKNYLAWYQQKPGQSPKLLVYFASTRESGVPDRFIGSGSGTDFTLTISSVQAEDLADYFCQQHYSTPYTFGGGTKLEIRRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN
21.865002
24.072025
221
240
219
218
219
218
101
2a12 fab heavy chain
2a12 fab light chain
mus musculus
mus musculus
E
protein
core protein precursor ee2
hepacivirus c
33
17
0.74
HL
train
7mwx_A_B
7mwx
structure of the core ectodomain of the hepatitis c virus envelope glycoprotein 2 with tamarin cd81
no
viral protein/immune system
2021-05-17
2021-09-15
x-ray diffraction
3.32
0.283
0.239
34526719
10.1038/s41586-021-03913-5
0
auth_asym_id
FabH:FabL
IGHV1
IGKV4
A
B
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYIHWVNQRPEQGLEWIGRIDPANGHTQYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCATSDYSYALDSWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
DIVMTQSPSSLAMSVGQKVTMSCKSSQSLLNSNNQKNYLAWYQQKPGQSPKLLVYFASTRESGVPDRFIGSGSGTDFTLTISSVQAEDLADYFCQQHYSTPYTFGGGTKLEIRRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYIHWVNQRPEQGLEWIGRIDPANGHTQYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCATSDYSYALDSWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
DIVMTQSPSSLAMSVGQKVTMSCKSSQSLLNSNNQKNYLAWYQQKPGQSPKLLVYFASTRESGVPDRFIGSGSGTDFTLTISSVQAEDLADYFCQQHYSTPYTFGGGTKLEIRRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN
21.714474
23.838428
218
218
218
218
218
218
97
2a12 fab heavy chain
2a12 fab light chain
mus musculus
mus musculus
C
protein
core protein precursor ee2
hepacivirus c
32
19
0.9
HL
train
7mwx_E_F
7mwx
structure of the core ectodomain of the hepatitis c virus envelope glycoprotein 2 with tamarin cd81
no
viral protein/immune system
2021-05-17
2021-09-15
x-ray diffraction
3.32
0.283
0.239
34526719
10.1038/s41586-021-03913-5
0
auth_asym_id
FabH:FabL
IGHV1
IGKV4
E
F
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYIHWVNQRPEQGLEWIGRIDPANGHTQYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCATSDYSYALDSWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
DIVMTQSPSSLAMSVGQKVTMSCKSSQSLLNSNNQKNYLAWYQQKPGQSPKLLVYFASTRESGVPDRFIGSGSGTDFTLTISSVQAEDLADYFCQQHYSTPYTFGGGTKLEIRRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYIHWVNQRPEQGLEWIGRIDPANGHTQYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCATSDYSYALDSWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
DIVMTQSPSSLAMSVGQKVTMSCKSSQSLLNSNNQKNYLAWYQQKPGQSPKLLVYFASTRESGVPDRFIGSGSGTDFTLTISSVQAEDLADYFCQQHYSTPYTFGGGTKLEIRRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN
20.884502
24.14657
218
218
218
218
218
218
96
2a12 fab heavy chain
2a12 fab light chain
mus musculus
mus musculus
G
protein
core protein precursor ee2
hepacivirus c
42
20
0.71
HL
train
7mx8_H_L
7mx8
crystal structure of hpv l1-directed e7m03 fab
no
immune system
2021-05-18
2022-05-25
x-ray diffraction
2.02
0.246
0.208
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV4
IGKV3
H
L
MKHLWFFLLLVAAPRWVLSQVQVQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHRGSTNYNPSLKSRVSISVDTSKNQVSLKLSSVTATDTAVYYCAFAYLWGSYRRRADYWGQGTLVTVVSRRLPPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTSGRHHHHHHGLNDIFEAQKIEWHE
MEAPAQLLFLLLLWLPDTTGEIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPPTYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQVQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHRGSTNYNPSLKSRVSISVDTSKNQVSLKLSSVTATDTAVYYCAFAYLWGSYRRRADYWGQGTLVTVVSRRLPPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPPTYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
22.30118
23.49507
269
236
222
216
222
216
105
e7m03 fab heavy chain
e7m03 fab light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7mxl_A_B
7mxl
complex of bet v 1 with the fab fragments of a three antibody cocktail
no
allergen
2021-05-19
2021-07-21
electron microscopy
3.2
N.A.
N.A.
34126155
10.1016/j.jaci.2021.05.038
0
auth_asym_id
FabH:FabL
IGHV4
IGKV3
A
B
QVQLQESGPGLVKPSETLSLTCSVSGGSITNYFWTWIRQSPGKGLEWIGYIYYSGGTNYNPSLKSRVTISIDTSKNQFSLNMNSVTAADTAVYYCAGSYYYGVDVWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPP
EIVLTQSPATLSLSPGERATLSCRASQSIKSFLAWYRQKPGQAPRLLIYDASNRPTGIPARFSGSGSGTDFTLTINSLESEDFAVYFCQQRNNWPFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLQESGPGLVKPSETLSLTCSVSGGSITNYFWTWIRQSPGKGLEWIGYIYYSGGTNYNPSLKSRVTISIDTSKNQFSLNMNSVTAADTAVYYCAGSYYYGVDVWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV
EIVLTQSPATLSLSPGERATLSCRASQSIKSFLAWYRQKPGQAPRLLIYDASNRPTGIPARFSGSGSGTDFTLTINSLESEDFAVYFCQQRNNWPFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFN
21.876352
21.957537
221
214
206
200
214
210
78
regn5713 antibody fab fragment heavy chain
regn5713 antibody fab fragment light chain
homo sapiens
homo sapiens
C
protein
major pollen allergen bet v 1-a
betula pendula
48
19
0.79
HL
train
7mxl_H_L
7mxl
complex of bet v 1 with the fab fragments of a three antibody cocktail
no
allergen
2021-05-19
2021-07-21
electron microscopy
3.2
N.A.
N.A.
34126155
10.1016/j.jaci.2021.05.038
0
auth_asym_id
FabH:FabL
IGHV3
IGKV3
H
L
EVQLVESGGDLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSFISDSSSNIYYADSVKGRFTISRDNAKKSLYLQMTSLRAEDTAVYYCAREAIGSTSFDNWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPP
EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRRLIYSASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAIYYCHQYNNWPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGDLVQPGGSLRLSCAASGFTFSSYEMNWVRQAPGKGLEWVSFISDSSSNIYYADSVKGRFTISRDNAKKSLYLQMTSLRAEDTAVYYCAREAIGSTSFDNWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV
IVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRRLIYSASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAIYYCHQYNNWPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
22.561888
22.207994
224
214
217
213
217
213
103
regn5714 antibody fab fragment heavy chain
regn5714 antibody fab fragment light chain
homo sapiens
homo sapiens
C
protein
major pollen allergen bet v 1-a
betula pendula
61
21
0.66
HL
train
7mxl_J_K
7mxl
complex of bet v 1 with the fab fragments of a three antibody cocktail
no
allergen
2021-05-19
2021-07-21
electron microscopy
3.2
N.A.
N.A.
34126155
10.1016/j.jaci.2021.05.038
0
auth_asym_id
FabH:FabL
IGHV1
IGKV3
J
K
QVQLVQSGAEVKKPGASVKVSCKASGYTFISYNIFWVRQATGQGLDWMGWMNPFRNNAGYAQKFQGRVTVTWDTSISTAYMELSSLSSEDTAIYYCAREHGSSWGFFDYWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPP
EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAEVKKPGASVKVSCKASGYTFISYNIFWVRQATGQGLDWMGWMNPFRNNAGYAQKFQGRVTVTWDTSISTAYMELSSLSSEDTAIYYCAREHGSSWGFFDYWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESK
EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
22.147274
22.821827
225
215
212
215
221
215
97
regn5715 antibody fab fragment heavy chain
regn5715 antibody fab fragment light chain
homo sapiens
homo sapiens
C
protein
major pollen allergen bet v 1-a
betula pendula
33
14
0.93
HL
train
7mxe_M_O
7mxe
ab1245 fab in complex with bg505 sosip.664 and 8anc195 fab
yes
antiviral protein/viral protein
2021-05-19
2021-10-27
electron microscopy
3.7
N.A.
N.A.
34697307
10.1038/s41541-021-00387-4
0
auth_asym_id
VH:VL
IGHV1
IGKV1
M
O
QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QIHLVQSGTEVKKPGSSVTVSCKAYGVNTFGLYAVNWVRQAPGQSLEYIGQIWRWKSSASHHFRGRVLISAVDLTGSSPPISSLEIKNLTSDDTAVYFCTTTSTYDRWSGLHHDGVMAFSSWGQGTLISVSA
DIQMTQSPSTLSASTGDTVRISCRASQSITGNWVAWYQQRPGKAPRLLIYRGAALLGGVPSRFRGSAAGTDFTLTIGNLQAEDFGTFYCQQYDTYPGTFGQGTKVEVK
15.15422
13.495755
244
215
132
108
132
108
44
8anc195 g52k5 fab heavy chain
8anc195 g52k5 fab light chain
homo sapiens
homo sapiens
C;P
protein;protein
hiv-1 envelope glycoprotein bg505 sosip.664 gp41;envelope glycoprotein bg505 sosip.664 gp120
human immunodeficiency virus 1;human immunodeficiency virus 1
28;35
14;11
1.0;0.73
HL
train
7mxe_R_W
7mxe
ab1245 fab in complex with bg505 sosip.664 and 8anc195 fab
yes
antiviral protein/viral protein
2021-05-19
2021-10-27
electron microscopy
3.7
N.A.
N.A.
34697307
10.1038/s41541-021-00387-4
0
auth_asym_id
VH:VL
IGHV4
IGLV9
R
W
MGWSCIILFLVATATGVHSQVQLQQSGPGLVKPSETLSLTCTVSGGSISESYYWKWIRQPPGKGLEWVGRIYGSGVSTSYNPSLESRVTISKDTSKNHFSLKLTSVTAADTAVYYCARSYVRAETLMFASLGGPYNRFDVWGAGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSXALTSGVHTFPAVLQSSXLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
MGWSCIILFLVATATGSWAQSALTQPSSASASLGASVTLTCTLSSGYSNSAVDWHQQRPGKGPQFVMRVGTGGIVGSKGDGIPDRFSGSGSGLNRYLIIKNIQEEDESDYHCGADHGTGSAFVYVFGGGTKLTVLGQPKASPLVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLQQSGPGLVKPSETLSLTCTVSGGSISESYYWKWIRQPPGKGLEWVGRIYGSGVSTSYNPSLESRVTISKDTSKNHFSLKLTSVTAADTAVYYCARSYVRAETLMFASLGGPYNRFDVWGAGVLVTV
QSALTQPSSASASLGASVTLTCTLSSGYSNSAVDWHQQRPGKGPQFVMRVGTGGIVGSKGDGIPDRFSGSGSGLNRYLIIKNIQEEDESDYHCGADHGTGSAFVYVFGGGTKLTVL
15.912049
14.018371
263
241
129
116
129
116
55
ab1245 fab heavy chain
ab1245 fab light chain
macaca mulatta
macaca mulatta
D;F;J
protein;protein;protein
hiv-1 envelope glycoprotein bg505 sosip.664 gp41;hiv-1 envelope glycoprotein bg505 sosip.664 gp41;envelope glycoprotein bg505 sosip.664 gp120
human immunodeficiency virus 1;human immunodeficiency virus 1;human immunodeficiency virus 1
15;15;37
7;6;21
0.88;1.0;1.0
HL
train