PDB_ID_chain stringlengths 6 10 | PDB_ID stringlengths 4 4 | Title stringlengths 4 230 | Mutation(s) stringclasses 2
values | Classification stringclasses 305
values | Deposit_date stringdate 1976-03-17 00:00:00 2026-01-20 00:00:00 | Release_date stringdate 1976-05-19 00:00:00 2026-02-25 00:00:00 | Method stringclasses 5
values | Resolution stringclasses 459
values | R_free stringclasses 227
values | R_work stringclasses 211
values | PMID stringlengths 4 8 | DOI stringlengths 4 68 | Model_index int64 0 76 | Asym_ID_type stringclasses 2
values | Ab_type stringclasses 30
values | H_subgroup stringclasses 8
values | L_subgroup stringclasses 19
values | H_chain_ID stringclasses 60
values | L_chain_ID stringclasses 58
values | H_fas_seq stringlengths 4 919 | L_fas_seq stringlengths 4 627 | H_filled_pdb_seq stringlengths 4 896 | L_filled_pdb_seq stringlengths 4 523 | H_mean_radius float64 0 79.7 | L_mean_radius float64 0 84.3 | H_fas_seq_len int64 0 919 | L_fas_seq_len int64 0 627 | H_pdb_seq_len int64 0 879 | L_pdb_seq_len int64 0 523 | H_filled_seq_len int64 0 896 | L_filled_seq_len int64 0 523 | HL_inf_res_num int64 0 175 | H_mol_name stringlengths 2 331 | L_mol_name stringlengths 2 151 | H_species stringclasses 68
values | L_species stringclasses 42
values | Ag_chain_ID(s) stringclasses 279
values | Ag_type(s) stringclasses 16
values | Ag_mol_name(s) stringlengths 2 390 | Ag_species stringclasses 743
values | Ab_ag_inf_res_num stringlengths 1 11 | CDR_inf_res_num stringclasses 444
values | CDR_inf_res_ratio stringlengths 1 19 | hl_label stringclasses 3
values | split stringclasses 1
value |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
7f23_E | 7f23 | cryo-em structure of the gtp-bound dopamine receptor 1 and mini-gs complex with nb35 | yes | membrane protein | 2021-06-10 | 2022-06-15 | electron microscopy | 3.58 | N.A. | N.A. | 35687690 | 10.1126/sciadv.abo4158 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | MKYLLPTAAAGLLLLAAQPAMAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.765721 | 0 | 160 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody 35 | N.A. | synthetic construct | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short,isoform gnas-2 of guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 41;33 | 13;11 | 0.65;0.69 | H_only | train |
7f2o_S | 7f2o | cryo-em structure of the type 2 bradykinin receptor in complex with the bradykinin and an gq protein | yes | membrane protein | 2021-06-11 | 2021-10-13 | electron microscopy | 2.9 | N.A. | N.A. | 34518695 | 10.1038/s41594-021-00645-y | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.039417 | 0 | 248 | 0 | 232 | 0 | 248 | 0 | 0 | single fab chain (svfv16) | N.A. | synthetic construct | N.A. | A;B | protein;protein | g subunit q (gi1-gq chimeric);guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;rattus norvegicus | 34;26 | 21;10 | 0.91;0.77 | H_only | train |
7f2s_A_B | 7f2s | crystal structure of anti s-gatifloxacin antibody fab fragment apo form | no | immune system | 2021-06-14 | 2021-12-29 | x-ray diffraction | 2.62 | 0.278 | 0.247 | N.A. | 10.1039/D1RA07143B | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV7 | A | B | EIQLQQSGPELVKPGTSVKVSCKASGYALTSYTMYWVKQSHGKSLEWIGYIDPYNGGTSYNQKFKGKATLTVDKSSSTAYMHLNSLTSEDSAVYYCAGWNRYDEDWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIVLTQSPASLAVSLGQRATISCRTSETIDSYGNSFMHWYQQKPGQPPKLLIYRASNLKSGIPARFSGSGSRTDFTLTINPVEADDVATYYCQQTNEVMYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EIQLQQSGPELVKPGTSVKVSCKASGYALTSYTMYWVKQSHGKSLEWIGYIDPYNGGTSYNQKFKGKATLTVDKSSSTAYMHLNSLTSEDSAVYYCAGWNRYDEDWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR | DIVLTQSPASLAVSLGQRATISCRTSETIDSYGNSFMHWYQQKPGQPPKLLIYRASNLKSGIPARFSGSGSRTDFTLTINPVEADDVATYYCQQTNEVMYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | 21.093552 | 23.723036 | 218 | 218 | 213 | 202 | 216 | 215 | 96 | antibody fab fragment heavy chain | antibody fab fragment light chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
7n8q_C_D | 7n8q | rhesusized rv305 dh677.3 fab bound to clade a/e 93th057 hiv-1 gp120 core. | yes | immune system | 2021-06-15 | 2022-04-06 | x-ray diffraction | 2.9 | 0.296 | 0.255 | 35069563 | 10.3389/fimmu.2021.787603 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | C | D | QVQLVQSGAEVKKPGASVKLSCKASGYTFTSYDINWVRQAPGQGLEWMGWMNPKTGNTGYAQKFQGRVTMTRDTSTSTAYMELSSLRSEDTAVYYCATYRIIAAVGYRYFQYWGQGALVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGG | AIQMTQSPSSLSASVGDKVTITCRASQGFGNYLAWYQQKPGKVPKLLIYAATTLQSEVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAPFTFGQGTRLEIKRAVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGVLKTGNSQESVTEQDSKDNTYSLSSTLTLSNTDYQSHNVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKLSCKASGYTFTSYDINWVRQAPGQGLEWMGWMNPKTGNTGYAQKFQGRVTMTRDTSTSTAYMELSSLRSEDTAVYYCATYRIIAAVGYRYFQYWGQGALVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEI | AIQMTQSPSSLSASVGDKVTITCRASQGFGNYLAWYQQKPGKVPKLLIYAATTLQSEVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAPFTFGQGTRLEIKRAVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGVLKTGNSQESVTEQDSKDNTYSLSSTLTLSNTDYQSHNVYACEVTHQGLSSPVTKSFN | 21.934177 | 22.595325 | 228 | 214 | 217 | 210 | 223 | 210 | 92 | rhesusized dh677.3 fab heavy chain | rhesusized dh677.3 fab light chain | macaca mulatta | macaca mulatta | A | protein | clade a/e 93th057 hiv-1 gp120 core | human immunodeficiency virus 1 | 46 | 20 | 0.91 | HL | train |
7n8q_H_L | 7n8q | rhesusized rv305 dh677.3 fab bound to clade a/e 93th057 hiv-1 gp120 core. | yes | immune system | 2021-06-15 | 2022-04-06 | x-ray diffraction | 2.9 | 0.296 | 0.255 | 35069563 | 10.3389/fimmu.2021.787603 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | QVQLVQSGAEVKKPGASVKLSCKASGYTFTSYDINWVRQAPGQGLEWMGWMNPKTGNTGYAQKFQGRVTMTRDTSTSTAYMELSSLRSEDTAVYYCATYRIIAAVGYRYFQYWGQGALVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGG | AIQMTQSPSSLSASVGDKVTITCRASQGFGNYLAWYQQKPGKVPKLLIYAATTLQSEVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAPFTFGQGTRLEIKRAVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGVLKTGNSQESVTEQDSKDNTYSLSSTLTLSNTDYQSHNVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKLSCKASGYTFTSYDINWVRQAPGQGLEWMGWMNPKTGNTGYAQKFQGRVTMTRDTSTSTAYMELSSLRSEDTAVYYCATYRIIAAVGYRYFQYWGQGALVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEI | AIQMTQSPSSLSASVGDKVTITCRASQGFGNYLAWYQQKPGKVPKLLIYAATTLQSEVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAPFTFGQGTRLEIKRAVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGVLKTGNSQESVTEQDSKDNTYSLSSTLTLSNTDYQSHNVYACEVTHQGLSSPVTKSFN | 22.189358 | 23.03685 | 228 | 214 | 218 | 210 | 223 | 210 | 94 | rhesusized dh677.3 fab heavy chain | rhesusized dh677.3 fab light chain | macaca mulatta | macaca mulatta | G | protein | clade a/e 93th057 hiv-1 gp120 core | human immunodeficiency virus 1 | 47 | 19 | 0.9 | HL | train |
7f3q_C_B | 7f3q | sars-cov-2 rbd in complex with a5-10 fab and a34-2 fab | no | viral protein/immune system | 2021-06-16 | 2022-06-22 | electron microscopy | 3.3 | N.A. | N.A. | 37077472 | 10.1093/abt/tbad002 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | C | B | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAIVGSGGSTYYADSVKGRFIISRDNSKNTLYLQMNSLRAEDTAVYYCAKSLIYGHYDILTGAYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | AQMTQSPSSVSASVGDRVTIPCRASQGIGNWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPPFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTK | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAIVGSGGSTYYADSVKGRFIISRDNSKNTLYLQMNSLRAEDTAVYYCAKSLIYGHYDILTGAYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | AQMTQSPSSVSASVGDRVTIPCRASQGIGNWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPPFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTK | 23.182682 | 21.64792 | 227 | 205 | 227 | 205 | 227 | 205 | 91 | heavy chain of a5-10 fab | light chain of a5-10 fab | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 32 | 17 | 1 | HL | train |
7f3q_H_L | 7f3q | sars-cov-2 rbd in complex with a5-10 fab and a34-2 fab | no | viral protein/immune system | 2021-06-16 | 2022-06-22 | electron microscopy | 3.3 | N.A. | N.A. | 37077472 | 10.1093/abt/tbad002 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | H | L | EVQLVESGGGLVQPGRSLRLSCAASGFTFDESAMHWVRQAPGEGLEWVSGISWNSGRIAYADSVRGRFTISRDNAKNSLYLQMNSLRAEDTALYFCALTTSGWFSFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | SYVLTQPPSVSVAPGKTARITCGGNNIGSKSVHWYQQKPGQAPVPVIYYDSDRPSGIPERFSGSNSGNTATLTISRVEVGDEADYYCQVWDSSSDRAVFGGGTTLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDESAMHWVRQAPGEGLEWVSGISWNSGRIAYADSVRGRFTISRDNAKNSLYLQMNSLRAEDTALYFCALTTSGWFSFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | YVLTQPPSVSVAPGKTARITCGGNNIGSKSVHWYQQKPGQAPVPVIYYDSDRPSGIPERFSGSNSGNTATLTISRVEVGDEADYYCQVWDSSSDRAVFGGGTTLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | 20.692318 | 24.492897 | 219 | 214 | 211 | 213 | 219 | 213 | 80 | heavy chain of a34-2 fab | light chain of a34-2 fab | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 52 | 25 | 0.86 | HL | train |
7f46_H_L | 7f46 | cryo-em structure of the sars-cov-2 s-6p in complex with 35b5 fab (state1, local refinement of the rbd, ntd and 35b5 fab) | yes | viral protein | 2021-06-17 | 2022-03-23 | electron microscopy | 4.79 | N.A. | N.A. | N.A. | 10.1038/s41392-022-00954-8 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV2 | H | L | QVQLLESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGVSWNSGTIGYADSVKGRFTISRDNAKNSLYLHMRSLRAEDTALYYCAKAVEMVRGLMGLGADPEYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLLESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGVSWNSGTIGYADSVKGRFTISRDNAKNSLYLHMRSLRAEDTALYYCAKAVEMVRGLMGLGADPEYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.84894 | 23.135841 | 237 | 219 | 226 | 218 | 232 | 218 | 91 | heavy chain of 35b5 fab | light chain of 35b5 fab | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 28 | 10 | 0.77 | HL | train |
7n9t_E | 7n9t | cryoem structure of sars-cov-2 spike in complex with nb17 | no | antiviral protein/viral protein | 2021-06-18 | 2021-08-11 | electron microscopy | 3.18 | N.A. | N.A. | N.A. | 10.1038/s41467-021-24963-3 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | HVQLVESGGGLVQAGGSLRLSCAASGSIFSSNAMSWYRQAPGKQRELVASITSGGNADYADSVKGRFTISRDKNTVYPEMSSLKPADTAVYYCHAVGQEASAYAPRAYWGQGTQVTVSS | N.A. | HVQLVESGGGLVQAGGSLRLSCAASGSIFSSNAMSWYRQAPGKQRELVASITSGGNADYADSVKGRFTISRDKNTVYPEMSSLKPADTAVYYCHAVGQEASAYAPRAYWGQGTQVTVSS | N.A. | 15.011008 | 0 | 119 | 0 | 119 | 0 | 119 | 0 | 0 | nanobody nb17 | N.A. | lama glama | N.A. | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 38 | 14 | 0.74 | H_only | train |
7n9t_F | 7n9t | cryoem structure of sars-cov-2 spike in complex with nb17 | no | antiviral protein/viral protein | 2021-06-18 | 2021-08-11 | electron microscopy | 3.18 | N.A. | N.A. | N.A. | 10.1038/s41467-021-24963-3 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | HVQLVESGGGLVQAGGSLRLSCAASGSIFSSNAMSWYRQAPGKQRELVASITSGGNADYADSVKGRFTISRDKNTVYPEMSSLKPADTAVYYCHAVGQEASAYAPRAYWGQGTQVTVSS | N.A. | HVQLVESGGGLVQAGGSLRLSCAASGSIFSSNAMSWYRQAPGKQRELVASITSGGNADYADSVKGRFTISRDKNTVYPEMSSLKPADTAVYYCHAVGQEASAYAPRAYWGQGTQVTVSS | N.A. | 15.011036 | 0 | 119 | 0 | 119 | 0 | 119 | 0 | 0 | nanobody nb17 | N.A. | lama glama | N.A. | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 37 | 14 | 0.78 | H_only | train |
7n9t_D | 7n9t | cryoem structure of sars-cov-2 spike in complex with nb17 | no | antiviral protein/viral protein | 2021-06-18 | 2021-08-11 | electron microscopy | 3.18 | N.A. | N.A. | N.A. | 10.1038/s41467-021-24963-3 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | HVQLVESGGGLVQAGGSLRLSCAASGSIFSSNAMSWYRQAPGKQRELVASITSGGNADYADSVKGRFTISRDKNTVYPEMSSLKPADTAVYYCHAVGQEASAYAPRAYWGQGTQVTVSS | N.A. | HVQLVESGGGLVQAGGSLRLSCAASGSIFSSNAMSWYRQAPGKQRELVASITSGGNADYADSVKGRFTISRDKNTVYPEMSSLKPADTAVYYCHAVGQEASAYAPRAYWGQGTQVTVSS | N.A. | 15.011037 | 0 | 119 | 0 | 119 | 0 | 119 | 0 | 0 | nanobody nb17 | N.A. | lama glama | N.A. | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 35 | 12 | 0.71 | H_only | train |
7f4f_S | 7f4f | cryo-em structure of afamelanotide-bound melanocortin-1 receptor in complex with gs protein and scfv16 | no | membrane protein | 2021-06-18 | 2021-09-08 | electron microscopy | 2.9 | N.A. | N.A. | 34453129 | 10.1038/s41422-021-00557-y | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 16.977722 | 0 | 285 | 0 | 230 | 0 | 247 | 0 | 0 | scfv16 | N.A. | synthetic construct | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 35;26 | 21;10 | 0.88;0.77 | H_only | train |
7f4h_N | 7f4h | cryo-em structure of afamelanotide-bound melanocortin-1 receptor in complex with gs protein, nb35 and scfv16 | no | membrane protein | 2021-06-18 | 2021-09-08 | electron microscopy | 2.7 | N.A. | N.A. | 34453129 | 10.1038/s41422-021-00557-y | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVS | N.A. | 13.43218 | 0 | 160 | 0 | 127 | 0 | 127 | 0 | 0 | nanobody 35 | N.A. | synthetic construct | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 54;30 | 17;11 | 0.59;0.69 | H_only | train |
7f4h_S | 7f4h | cryo-em structure of afamelanotide-bound melanocortin-1 receptor in complex with gs protein, nb35 and scfv16 | no | membrane protein | 2021-06-18 | 2021-09-08 | electron microscopy | 2.7 | N.A. | N.A. | 34453129 | 10.1038/s41422-021-00557-y | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 16.99522 | 0 | 285 | 0 | 230 | 0 | 247 | 0 | 0 | scfv16 | N.A. | synthetic construct | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 36;26 | 22;11 | 0.88;0.79 | H_only | train |
7n9u_E | 7n9u | ca-targeting nanobody is a tool for studying hiv-1 capsid lattice interactions | no | viral protein/immune system | 2021-06-18 | 2022-06-22 | x-ray diffraction | 3.19 | 0.258 | 0.228 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGFDPVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTXXAYWGQGTQVTVSSAA | N.A. | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGFDPVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTXXAYWGQGTQVTVSSAA | N.A. | 13.846112 | 0 | 118 | 0 | 116 | 0 | 118 | 0 | 0 | nanobody | N.A. | lama glama | N.A. | A | protein | capsid protein | human immunodeficiency virus 1 | 35 | 9 | 0.56 | H_only | train |
7n9u_F | 7n9u | ca-targeting nanobody is a tool for studying hiv-1 capsid lattice interactions | no | viral protein/immune system | 2021-06-18 | 2022-06-22 | x-ray diffraction | 3.19 | 0.258 | 0.228 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGFDPVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTXXAYWGQGTQVTVSSAA | N.A. | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGFDPVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTXXAYWGQGTQVTVSS | N.A. | 13.575964 | 0 | 118 | 0 | 113 | 0 | 116 | 0 | 0 | nanobody | N.A. | lama glama | N.A. | B | protein | capsid protein | human immunodeficiency virus 1 | 33 | 8 | 0.53 | H_only | train |
7n9u_D | 7n9u | ca-targeting nanobody is a tool for studying hiv-1 capsid lattice interactions | no | viral protein/immune system | 2021-06-18 | 2022-06-22 | x-ray diffraction | 3.19 | 0.258 | 0.228 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGFDPVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTXXAYWGQGTQVTVSSAA | N.A. | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGFDPVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTXXAYWGQGTQVTVSSAA | N.A. | 13.690588 | 0 | 118 | 0 | 116 | 0 | 118 | 0 | 0 | nanobody | N.A. | lama glama | N.A. | C | protein | capsid protein | human immunodeficiency virus 1 | 32 | 9 | 0.6 | H_only | train |
7n9v_L | 7n9v | ca-targeting nanobody is a tool for studying hiv-1 capsid lattice interactions | no | viral protein/immune system | 2021-06-18 | 2022-06-22 | x-ray diffraction | 3.45 | 0.258 | 0.212 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | L | N.A. | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGGYAVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTAYWGQGTQVTVS | N.A. | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGGYAVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTAYWGQGTQVTVS | N.A. | 13.542487 | 0 | 113 | 0 | 113 | 0 | 113 | 0 | 0 | nanobody-gyar | N.A. | lama glama | N.A. | A | protein | capsid protein | human immunodeficiency virus 1 | 31 | 9 | 0.6 | H_only | train |
7n9v_B | 7n9v | ca-targeting nanobody is a tool for studying hiv-1 capsid lattice interactions | no | viral protein/immune system | 2021-06-18 | 2022-06-22 | x-ray diffraction | 3.45 | 0.258 | 0.212 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGGYAVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTAYWGQGTQVTVS | N.A. | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGGYAVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTAYWGQGTQVTVS | N.A. | 13.577071 | 0 | 113 | 0 | 113 | 0 | 113 | 0 | 0 | nanobody-gyar | N.A. | lama glama | N.A. | C | protein | capsid protein | human immunodeficiency virus 1 | 32 | 9 | 0.6 | H_only | train |
7n9v_E | 7n9v | ca-targeting nanobody is a tool for studying hiv-1 capsid lattice interactions | no | viral protein/immune system | 2021-06-18 | 2022-06-22 | x-ray diffraction | 3.45 | 0.258 | 0.212 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGGYAVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTAYWGQGTQVTVS | N.A. | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGGYAVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTAYWGQGTQVTVS | N.A. | 13.528311 | 0 | 113 | 0 | 113 | 0 | 113 | 0 | 0 | nanobody-gyar | N.A. | lama glama | N.A. | D | protein | capsid protein | human immunodeficiency virus 1 | 33 | 9 | 0.6 | H_only | train |
7n9v_F | 7n9v | ca-targeting nanobody is a tool for studying hiv-1 capsid lattice interactions | no | viral protein/immune system | 2021-06-18 | 2022-06-22 | x-ray diffraction | 3.45 | 0.258 | 0.212 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGGYAVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTAYWGQGTQVTVS | N.A. | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGGYAVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTAYWGQGTQVTVS | N.A. | 13.527187 | 0 | 113 | 0 | 113 | 0 | 113 | 0 | 0 | nanobody-gyar | N.A. | lama glama | N.A. | G | protein | capsid protein | human immunodeficiency virus 1 | 30 | 8 | 0.57 | H_only | train |
7n9v_J | 7n9v | ca-targeting nanobody is a tool for studying hiv-1 capsid lattice interactions | no | viral protein/immune system | 2021-06-18 | 2022-06-22 | x-ray diffraction | 3.45 | 0.258 | 0.212 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | J | N.A. | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGGYAVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTAYWGQGTQVTVS | N.A. | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGGYAVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTAYWGQGTQVTVS | N.A. | 13.532317 | 0 | 113 | 0 | 113 | 0 | 113 | 0 | 0 | nanobody-gyar | N.A. | lama glama | N.A. | I | protein | capsid protein | human immunodeficiency virus 1 | 32 | 9 | 0.6 | H_only | train |
7n9v_H | 7n9v | ca-targeting nanobody is a tool for studying hiv-1 capsid lattice interactions | no | viral protein/immune system | 2021-06-18 | 2022-06-22 | x-ray diffraction | 3.45 | 0.258 | 0.212 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | H | N.A. | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGGYAVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTAYWGQGTQVTVS | N.A. | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGGYAVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTAYWGQGTQVTVS | N.A. | 13.552094 | 0 | 113 | 0 | 113 | 0 | 113 | 0 | 0 | nanobody-gyar | N.A. | lama glama | N.A. | K | protein | capsid protein | human immunodeficiency virus 1 | 32 | 9 | 0.6 | H_only | train |
7n9x_E | 7n9x | ca-targeting nanobody is a tool for studying hiv-1 capsid lattice interactions | no | viral protein/immune system | 2021-06-18 | 2022-06-22 | x-ray diffraction | 3.51 | 0.27 | 0.245 | N.A. | N.A. | 0 | label_asym_id | VHH | IGHV3 | N.A. | E | N.A. | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGFDPVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTAYWGQGTQVTV | N.A. | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGFDPVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTAYWGQGTQVTV | N.A. | 13.363909 | 0 | 112 | 0 | 112 | 0 | 112 | 0 | 0 | nanobody | N.A. | lama glama | N.A. | A | protein | capsid protein | human immunodeficiency virus 1 | 33 | 10 | 0.59 | H_only | train |
7n9x_D | 7n9x | ca-targeting nanobody is a tool for studying hiv-1 capsid lattice interactions | no | viral protein/immune system | 2021-06-18 | 2022-06-22 | x-ray diffraction | 3.51 | 0.27 | 0.245 | N.A. | N.A. | 0 | label_asym_id | VHH | IGHV3 | N.A. | D | N.A. | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGFDPVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTXXAYWGQGTQVTVS | N.A. | DVQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGFDPVLADSVKGRFTISIDSAENTLALQMNRLKPEDTAVYYCFAALDTXXAYWGQGTQVTVS | N.A. | 13.459729 | 0 | 115 | 0 | 113 | 0 | 115 | 0 | 0 | nanobody | N.A. | lama glama | N.A. | B | protein | capsid protein | human immunodeficiency virus 1 | 35 | 10 | 0.62 | H_only | train |
7n9x_F | 7n9x | ca-targeting nanobody is a tool for studying hiv-1 capsid lattice interactions | no | viral protein/immune system | 2021-06-18 | 2022-06-22 | x-ray diffraction | 3.51 | 0.27 | 0.245 | N.A. | N.A. | 0 | label_asym_id | VHH | IGHV3 | N.A. | F | N.A. | VQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGFDPVLADSVKGRFTISIDSAENTLALQRNRLKPEDTAVYYCFAALDTXXAYWGQGTQVTVS | N.A. | VQLQESGGGLVQAGGSLRLSCAASGSISRFNAMGWWRQAPGKEREFVARIVKGFDPVLADSVKGRFTISIDSAENTLALQRNRLKPEDTAVYYCFAALDTXXAYWGQGTQVTVS | N.A. | 13.383335 | 0 | 114 | 0 | 112 | 0 | 114 | 0 | 0 | nanobody | N.A. | lama glama | N.A. | C | protein | capsid protein | human immunodeficiency virus 1 | 34 | 10 | 0.56 | H_only | train |
7na7_N | 7na7 | structures of human ghrelin receptor-gi complexes with ghrelin and a synthetic agonist | yes | membrane protein | 2021-06-20 | 2021-12-15 | electron microscopy | 2.7 | N.A. | N.A. | N.A. | 10.1038/s41467-021-26735-5 | 0 | auth_asym_id | scFv | N.A. | N.A. | N | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPERFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPERFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.255388 | 0 | 246 | 0 | 232 | 0 | 246 | 0 | 0 | antibody fragment | N.A. | mus musculus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 34;25 | 21;11 | 0.91;0.85 | H_only | train |
7na8_N | 7na8 | structures of human ghrelin receptor-gi complexes with ghrelin and a synthetic agonist | no | membrane protein | 2021-06-20 | 2021-12-15 | electron microscopy | 2.7 | N.A. | N.A. | N.A. | 10.1038/s41467-021-26735-5 | 0 | auth_asym_id | scFv | N.A. | N.A. | N | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPERFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPERFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.21223 | 0 | 246 | 0 | 232 | 0 | 246 | 0 | 0 | antibody fragment | N.A. | mus musculus | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1 | homo sapiens;homo sapiens | 22;30 | 9;17 | 0.82;0.89 | H_only | train |
7f55_N | 7f55 | cryo-em structure of bremelanotide-mc4r-gs_nb35 complex | yes | membrane protein | 2021-06-21 | 2021-11-03 | electron microscopy | 3.1 | N.A. | N.A. | 34433901 | 10.1038/s41422-021-00552-3 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | 13.740971 | 0 | 126 | 0 | 126 | 0 | 126 | 0 | 0 | nanobody35 | N.A. | synthetic construct | N.A. | A;B | protein;protein | isoform gnas-2 of guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 50;33 | 14;11 | 0.54;0.69 | H_only | train |
7f58_N | 7f58 | cryo-em structure of thiq-mc4r-gs_nb35 complex | yes | membrane protein | 2021-06-21 | 2021-11-03 | electron microscopy | 3.1 | N.A. | N.A. | 34433901 | 10.1038/s41422-021-00552-3 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | 13.661041 | 0 | 126 | 0 | 126 | 0 | 126 | 0 | 0 | nanobody35 | N.A. | synthetic construct | N.A. | A;B | protein;protein | isoform gnas-2 of guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 51;31 | 14;11 | 0.56;0.73 | H_only | train |
7nab_H_L | 7nab | crystal structure of human neutralizing mab cv3-25 binding to sars-cov-2 s mper peptide 1140-1165 | yes | viral protein/immune system | 2021-06-21 | 2021-12-08 | x-ray diffraction | 2.15 | 0.238 | 0.185 | 34971573 | 10.1016/j.celrep.2021.110210 | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGKV1 | H | L | EVQLVESGAEVKKPGESLKISCKGSGYTFTRYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGHVTISADKSISTAYLQWNSLKASDTAMYYCARLPQYCSNGVCQRWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | EIVLTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQGNSFPYTFGQGTNLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | EVQLVESGAEVKKPGESLKISCKGSGYTFTRYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGHVTISADKSISTAYLQWNSLKASDTAMYYCARLPQYCSNGVCQRWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | EIVLTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQGNSFPYTFGQGTNLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.54611 | 22.740677 | 227 | 213 | 226 | 213 | 226 | 213 | 96 | cv3-25 fab heavy chain | cv3-25 fab light chain | homo sapiens | homo sapiens | C | peptide | spike protein s2 | severe acute respiratory syndrome coronavirus 2 | 32 | 16 | 0.89 | HL | train |
7nab_A_B | 7nab | crystal structure of human neutralizing mab cv3-25 binding to sars-cov-2 s mper peptide 1140-1165 | yes | viral protein/immune system | 2021-06-21 | 2021-12-08 | x-ray diffraction | 2.15 | 0.238 | 0.185 | 34971573 | 10.1016/j.celrep.2021.110210 | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGKV1 | A | B | EVQLVESGAEVKKPGESLKISCKGSGYTFTRYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGHVTISADKSISTAYLQWNSLKASDTAMYYCARLPQYCSNGVCQRWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | EIVLTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQGNSFPYTFGQGTNLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | EVQLVESGAEVKKPGESLKISCKGSGYTFTRYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGHVTISADKSISTAYLQWNSLKASDTAMYYCARLPQYCSNGVCQRWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | EIVLTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQGNSFPYTFGQGTNLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.43665 | 22.78507 | 227 | 213 | 226 | 213 | 226 | 213 | 93 | cv3-25 fab heavy chain | cv3-25 fab light chain | homo sapiens | homo sapiens | D | peptide | spike protein s2 | severe acute respiratory syndrome coronavirus 2 | 35 | 17 | 0.85 | HL | train |
7f5h_C | 7f5h | the crystal structure of rbd-nanobody complex, dl28 (sc4) | no | viral protein | 2021-06-22 | 2022-06-29 | x-ray diffraction | 3 | 0.248 | 0.226 | 35722331 | 10.3389/fmicb.2022.875840 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | GSSSQVQLQESGGGLVQAGGSLRLSCAASGSDFSSSTMGWYRQAPGKQREFVAISSEGSTSYAGSVKGRFTISRDNAKNTVYLQMNSLEPEDTAVYYCNVVDRWYDYWGQGTQVTVSAGRAGEQKLISEEDLNSAVDHHHHHH | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSDFSSSTMGWYRQAPGKQREFVAISSEGSTSYAGSVKGRFTISRDNAKNTVYLQMNSLEPEDTAVYYCNVVDRWYDYWGQGTQVTVSA | N.A. | 13.770895 | 0 | 143 | 0 | 114 | 0 | 114 | 0 | 0 | nanobody dl28 | N.A. | vicugna pacos | N.A. | A | protein | sars-cov-2 spike receptor-binding domain (rbd) | severe acute respiratory syndrome coronavirus 2 | 55 | 11 | 0.38 | H_only | train |
7f5h_D | 7f5h | the crystal structure of rbd-nanobody complex, dl28 (sc4) | no | viral protein | 2021-06-22 | 2022-06-29 | x-ray diffraction | 3 | 0.248 | 0.226 | 35722331 | 10.3389/fmicb.2022.875840 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | GSSSQVQLQESGGGLVQAGGSLRLSCAASGSDFSSSTMGWYRQAPGKQREFVAISSEGSTSYAGSVKGRFTISRDNAKNTVYLQMNSLEPEDTAVYYCNVVDRWYDYWGQGTQVTVSAGRAGEQKLISEEDLNSAVDHHHHHH | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSDFSSSTMGWYRQAPGKQREFVAISSEGSTSYAGSVKGRFTISRDNAKNTVYLQMNSLEPEDTAVYYCNVVDRWYDYWGQGTQVTVSAGRAGEQ | N.A. | 15.200251 | 0 | 143 | 0 | 120 | 0 | 120 | 0 | 0 | nanobody dl28 | N.A. | vicugna pacos | N.A. | B | protein | sars-cov-2 spike receptor-binding domain (rbd) | severe acute respiratory syndrome coronavirus 2 | 54 | 11 | 0.37 | H_only | train |
7oxn_H_K | 7oxn | crystal structure of tap01 in complex with cyclised amyloid beta peptide | yes | immune system | 2021-06-22 | 2022-06-29 | x-ray diffraction | 2.5 | 0.265 | 0.228 | 34776512 | 10.1038/s41380-021-01385-7 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | K | QVQLKQSGPGLVQPSQSLSITCTVSGFSLTSYGIHWVRQSPGKGLEWLGVMWSGGITDFYAAFISRLSISRDISKSQVFFKMNSLQADDTAIYYCARGSRYALDYWGQGTSVSVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLKQSGPGLVQPSQSLSITCTVSGFSLTSYGIHWVRQSPGKGLEWLGVMWSGGITDFYAAFISRLSISRDISKSQVFFKMNSLQADDTAIYYCARGSRYALDYWGQGTSVSVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.900478 | 22.886185 | 219 | 214 | 214 | 213 | 217 | 213 | 95 | tap01 family antibody heavy chain | tap01 family antibody light chain | homo sapiens | homo sapiens | A | peptide | amyloid-beta precursor protein | homo sapiens | 36 | 23 | 0.92 | HL | train |
7ox2_D_E | 7ox2 | fab 6e2: hil-9 complex | no | cytokine | 2021-06-22 | 2022-12-28 | x-ray diffraction | 3.34 | 0.283 | 0.224 | N.A. | 10.1101/2022.12.30.522308 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | D | E | QVQLVESGGGLVQPGGSLRLSCAASGFTFSSSAMGWVRQAPGKGLEWVSTIVNSITTTYYADSVKGRFTISTDNAKNTLYLQIDSLKSEDTAVYYCGSLAGPYYDYWGQGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SSALTQPSTVSVSLGQTARITCQGGSLGSYDAHWYQQKPGQAPVLVIHDNNSRPSGIPERFTGSRSGETATLTISGAQTEDEADYYCQSYDSTSDALVFGGGTQLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVESGGGLVQPGGSLRLSCAASGFTFSSSAMGWVRQAPGKGLEWVSTIVNSITTTYYADSVKGRFTISTDNAKNTLYLQIDSLKSEDTAVYYCGSLAGPYYDYWGQGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | ALTQPSTVSVSLGQTARITCQGGSLGSYDAHWYQQKPGQAPVLVIHDNNSRPSGIPERFTGSRSGETATLTISGAQTEDEADYYCQSYDSTSDALVFGGGTQLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 21.315046 | 23.732763 | 220 | 214 | 210 | 209 | 218 | 209 | 86 | heavy chain (fab 6e2) | light chain (fab 6e2) | homo sapiens | homo sapiens | M | protein | interleukin-9 | homo sapiens | 48 | 23 | 0.85 | HL | train |
7ox2_J_K | 7ox2 | fab 6e2: hil-9 complex | no | cytokine | 2021-06-22 | 2022-12-28 | x-ray diffraction | 3.34 | 0.283 | 0.224 | N.A. | 10.1101/2022.12.30.522308 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | J | K | QVQLVESGGGLVQPGGSLRLSCAASGFTFSSSAMGWVRQAPGKGLEWVSTIVNSITTTYYADSVKGRFTISTDNAKNTLYLQIDSLKSEDTAVYYCGSLAGPYYDYWGQGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SSALTQPSTVSVSLGQTARITCQGGSLGSYDAHWYQQKPGQAPVLVIHDNNSRPSGIPERFTGSRSGETATLTISGAQTEDEADYYCQSYDSTSDALVFGGGTQLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVESGGGLVQPGGSLRLSCAASGFTFSSSAMGWVRQAPGKGLEWVSTIVNSITTTYYADSVKGRFTISTDNAKNTLYLQIDSLKSEDTAVYYCGSLAGPYYDYWGQGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | ALTQPSTVSVSLGQTARITCQGGSLGSYDAHWYQQKPGQAPVLVIHDNNSRPSGIPERFTGSRSGETATLTISGAQTEDEADYYCQSYDSTSDALVFGGGTQLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 21.13893 | 23.600042 | 220 | 214 | 210 | 209 | 218 | 209 | 88 | heavy chain (fab 6e2) | light chain (fab 6e2) | homo sapiens | homo sapiens | N | protein | interleukin-9 | homo sapiens | 50 | 23 | 0.82 | HL | train |
7ox2_B_C | 7ox2 | fab 6e2: hil-9 complex | no | cytokine | 2021-06-22 | 2022-12-28 | x-ray diffraction | 3.34 | 0.283 | 0.224 | N.A. | 10.1101/2022.12.30.522308 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | B | C | QVQLVESGGGLVQPGGSLRLSCAASGFTFSSSAMGWVRQAPGKGLEWVSTIVNSITTTYYADSVKGRFTISTDNAKNTLYLQIDSLKSEDTAVYYCGSLAGPYYDYWGQGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SSALTQPSTVSVSLGQTARITCQGGSLGSYDAHWYQQKPGQAPVLVIHDNNSRPSGIPERFTGSRSGETATLTISGAQTEDEADYYCQSYDSTSDALVFGGGTQLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVESGGGLVQPGGSLRLSCAASGFTFSSSAMGWVRQAPGKGLEWVSTIVNSITTTYYADSVKGRFTISTDNAKNTLYLQIDSLKSEDTAVYYCGSLAGPYYDYWGQGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | SALTQPSTVSVSLGQTARITCQGGSLGSYDAHWYQQKPGQAPVLVIHDNNSRPSGIPERFTGSRSGETATLTISGAQTEDEADYYCQSYDSTSDALVFGGGTQLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 21.556166 | 23.471884 | 220 | 214 | 213 | 210 | 218 | 210 | 92 | heavy chain (fab 6e2) | light chain (fab 6e2) | homo sapiens | homo sapiens | O | protein | interleukin-9 | homo sapiens | 49 | 23 | 0.85 | HL | train |
7ox2_A_L | 7ox2 | fab 6e2: hil-9 complex | no | cytokine | 2021-06-22 | 2022-12-28 | x-ray diffraction | 3.34 | 0.283 | 0.224 | N.A. | 10.1101/2022.12.30.522308 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | A | L | QVQLVESGGGLVQPGGSLRLSCAASGFTFSSSAMGWVRQAPGKGLEWVSTIVNSITTTYYADSVKGRFTISTDNAKNTLYLQIDSLKSEDTAVYYCGSLAGPYYDYWGQGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SSALTQPSTVSVSLGQTARITCQGGSLGSYDAHWYQQKPGQAPVLVIHDNNSRPSGIPERFTGSRSGETATLTISGAQTEDEADYYCQSYDSTSDALVFGGGTQLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVESGGGLVQPGGSLRLSCAASGFTFSSSAMGWVRQAPGKGLEWVSTIVNSITTTYYADSVKGRFTISTDNAKNTLYLQIDSLKSEDTAVYYCGSLAGPYYDYWGQGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | ALTQPSTVSVSLGQTARITCQGGSLGSYDAHWYQQKPGQAPVLVIHDNNSRPSGIPERFTGSRSGETATLTISGAQTEDEADYYCQSYDSTSDALVFGGGTQLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 21.491781 | 23.41359 | 220 | 214 | 212 | 209 | 219 | 209 | 93 | heavy chain (fab 6e2) | light chain (fab 6e2) | homo sapiens | homo sapiens | T | protein | interleukin-9 | homo sapiens | 48 | 23 | 0.85 | HL | train |
7ox4_A_B | 7ox4 | mouse interleukin-9 in complex with fab 35d8. | no | cytokine | 2021-06-22 | 2022-12-28 | x-ray diffraction | 1.8 | 0.229 | 0.183 | N.A. | 10.1101/2022.12.30.522308 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV3 | A | B | QVQLVESGPGLVQPSQTLSLTCTVSGGSITTSYYDWSWIRQPPGKGLEWMGAIAYSGNAYYSPSLKSRTSISRDTSKNQFTLQLSSVTPEDTAVYYCAREDHYSDTHGWNDYWGQGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SSALTQPSAVSVSLGQTARITCQGGSIGNFGATWYQQKPGQAPVLLSLGEHSRPSGIPERFSGSKSGGTATLTISGAQAEDEADYYCQSFDYIGNDHVFGGGTHLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVESGPGLVQPSQTLSLTCTVSGGSITTSYYDWSWIRQPPGKGLEWMGAIAYSGNAYYSPSLKSRTSISRDTSKNQFTLQLSSVTPEDTAVYYCAREDHYSDTHGWNDYWGQGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | SALTQPSAVSVSLGQTARITCQGGSIGNFGATWYQQKPGQAPVLLSLGEHSRPSGIPERFSGSKSGGTATLTISGAQAEDEADYYCQSFDYIGNDHVFGGGTHLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 21.16843 | 23.446733 | 226 | 214 | 224 | 200 | 224 | 210 | 88 | heavy chain (fab 35d8) | light chain (fab 35d8) | mus musculus | mus musculus | C | protein | interleukin-9 | mus musculus | 37 | 14 | 0.82 | HL | train |
7f62_H_L | 7f62 | cryo-em structure of sars-cov-2 spike in complex with a neutralizing antibody chab-25 (focused refinement of s-rbd and chab-25 region) | no | viral protein | 2021-06-24 | 2021-08-04 | electron microscopy | 3.6 | N.A. | N.A. | 34673836 | 10.1371/journal.ppat.1009704 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EVQLEESGGGLVKPGGSLKLSCAASGFTFSSYTMSWVRQSPEKRLEWVAEISSGGTYTNYPDTATGRFTISRDNAKNTLYLEMSSLRSEDTAMYYCANFGNYEEIAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEY... | QIVLTQSPAIMSVSLGERVTMTCTASSSVSSSYLHWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCHQYHRSPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLEESGGGLVKPGGSLKLSCAASGFTFSSYTMSWVRQSPEKRLEWVAEISSGGTYTNYPDTATGRFTISRDNAKNTLYLEMSSLRSEDTAMYYCANFGNYEEIAYWGQGTLVTVSAA | QIVLTQSPAIMSVSLGERVTMTCTASSSVSSSYLHWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCHQYHRSPYTFGGGTKLEIKR | 13.957262 | 13.607941 | 447 | 215 | 119 | 109 | 119 | 109 | 43 | rbd-chab-25, heavy chain | rbd-chab-25, light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 43 | 16 | 0.7 | HL | train |
7f63_H_L | 7f63 | cryo-em structure of sars-cov-2 spike in complex with a neutralizing antibody chab-45 (focused refinement of s-rbd and chab-45 region) | no | viral protein | 2021-06-24 | 2021-08-04 | electron microscopy | 3.9 | N.A. | N.A. | 34673836 | 10.1371/journal.ppat.1009704 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | H | L | EVQLQQSGPELVKPGASVKISCKTSGYTFTEYTIYWVKQSLGKSLEWIGGNNPNNDDTTYKQFFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYCARDGYPYYYALDFWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGK... | DIVMTQSQKFMSTSVGDRVSVTCKSSQNVGTNVAWYQQKPGQSPKALIYSASYRYSGVPDHFTGSGSGTDFTLTISNVQSADLAEYFCQQYNNYPWTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLQQSGPELVKPGASVKISCKTSGYTFTEYTIYWVKQSLGKSLEWIGGNNPNNDDTTYKQFFKGKATLTVDKSSSTAYMELRSLTSEDSAVYYCARDGYPYYYALDFWGQGTSVTVSS | DIVMTQSQKFMSTSVGDRVSVTCKSSQNVGTNVAWYQQKPGQSPKALIYSASYRYSGVPDHFTGSGSGTDFTLTISNVQSADLAEYFCQQYNNYPWTFGGGTKLEIKRTV | 14.269246 | 14.18574 | 449 | 214 | 120 | 110 | 120 | 110 | 40 | rbd-chab45, heavy chain | rbd-chab45, light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 27 | 14 | 0.88 | HL | train |
7r73_A | 7r73 | crystal structure of llama vhh antibody d7 in complex with hiv-1 gp120 core | no | immune system | 2021-06-24 | 2022-03-30 | x-ray diffraction | 1.76 | 0.215 | 0.179 | 35413243 | 10.1016/j.str.2022.03.012 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | A | N.A. | AVQLQESGGGLVQAGGSLRLSCTVSARTSSSHDMGWFRQAPGKEREFVAAISWSGGTTNYVDSVKGRFDISKDNAKNAVYLQMNSLKPEDTAVYYCAAKWRPLRYSDNPSNSDYNYWGQGTQVTVSS | N.A. | VQLQESGGGLVQAGGSLRLSCTVSARTSSSHDMGWFRQAPGKEREFVAAISWSGGTTNYVDSVKGRFDISKDNAKNAVYLQMNSLKPEDTAVYYCAAKWRPLRYSDNPSNSDYNYWGQGTQVTVSS | N.A. | 13.869831 | 0 | 127 | 0 | 126 | 0 | 126 | 0 | 0 | llama antibody d7 | N.A. | lama glama | N.A. | G | protein | glycoprotein 120 | human immunodeficiency virus 1 | 50 | 22 | 0.96 | H_only | train |
7r74_D | 7r74 | crystal structure of llama vhh antibody in complex with hiv-1 hxbc2 gp120 core | no | immune system | 2021-06-24 | 2022-03-30 | x-ray diffraction | 2.76 | 0.27 | 0.212 | 35413243 | 10.1016/j.str.2022.03.012 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | AVQLVDSGGGLVQAGGSLRLSCVVSGSIFSINAMGWYRQAPGKQRDLVARISGDSSTYYIDSVKGRFTISRDNAANTVYLQMNSLKPEDTAVYYCAARRLPIGDYTDWGQGTQVTVSS | N.A. | AVQLVDSGGGLVQAGGSLRLSCVVSGSIFSINAMGWYRQAPGKQRDLVARISGDSSTYYIDSVKGRFTISRDNAANTVYLQMNSLKPEDTAVYYCAARRLPIGDYTDWGQGTQVTVSS | N.A. | 13.61426 | 0 | 118 | 0 | 118 | 0 | 118 | 0 | 0 | antibody c8 vhh domain | N.A. | lama glama | N.A. | A | protein | glycoprotein 120 | human immunodeficiency virus 1 | 68 | 18 | 0.55 | H_only | train |
7r74_B | 7r74 | crystal structure of llama vhh antibody in complex with hiv-1 hxbc2 gp120 core | no | immune system | 2021-06-24 | 2022-03-30 | x-ray diffraction | 2.76 | 0.27 | 0.212 | 35413243 | 10.1016/j.str.2022.03.012 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | AVQLVDSGGGLVQAGGSLRLSCVVSGSIFSINAMGWYRQAPGKQRDLVARISGDSSTYYIDSVKGRFTISRDNAANTVYLQMNSLKPEDTAVYYCAARRLPIGDYTDWGQGTQVTVSS | N.A. | AVQLVDSGGGLVQAGGSLRLSCVVSGSIFSINAMGWYRQAPGKQRDLVARISGDSSTYYIDSVKGRFTISRDNAANTVYLQMNSLKPEDTAVYYCAARRLPIGDYTDWGQGTQVTVSS | N.A. | 13.580478 | 0 | 118 | 0 | 118 | 0 | 118 | 0 | 0 | antibody c8 vhh domain | N.A. | lama glama | N.A. | C | protein | glycoprotein 120 | human immunodeficiency virus 1 | 65 | 18 | 0.55 | H_only | train |
7r7n_H_L | 7r7n | sars-cov-2 spike in complex with the s2d106 neutralizing antibody fab fragment (local refinement of the rbd and s2d106) | no | viral protein/immune system | 2021-06-25 | 2021-07-21 | electron microscopy | 3.95 | N.A. | N.A. | 34261126 | 10.1038/s41586-021-03807-6 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | H | L | EVQLVQSGAEVKKPGSSVKVSCKASGGPFSSSAISWVRQAPGQGLEWMGGIIPMVGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARDSRYCSGGSCYSVWFDPWGQGTLVTVSS | DIQLTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKVLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPRTFGQGTKVEMK | VQLVQSGAEVKKPGSSVKVSCKASGGPFSSSAISWVRQAPGQGLEWMGGIIPMVGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARDSRYCSGGSCYSVWFDPWGQGTLVT | IQLTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKVLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPRTFGQGTKV | 14.080112 | 12.356942 | 126 | 107 | 109 | 93 | 122 | 103 | 44 | s2d106 fab heavy chain | s2d106 fab light chain | homo sapiens | homo sapiens | E | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 48 | 15 | 0.6 | HL | train |
7r8m_H_L | 7r8m | structure of the sars-cov-2 s 6p trimer in complex with neutralizing antibody c032 | no | viral protein/immune system | 2021-06-26 | 2021-08-04 | electron microscopy | 3.4 | N.A. | N.A. | 34331873 | 10.1016/j.immuni.2021.07.008 | 0 | auth_asym_id | VH:VL | IGHV5 | IGLV1 | H | L | EVQLVQSGAEVKKPGESLKISCKGSGYSFTSYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCARGVAVDWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSALYVFGTGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVQSGAEVKKPGESLKISCKGSGYSFTSYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCARGVAVDWYFDLWGRGTLVTVSSAS | VLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSALYVFGTGTKVTVL | 13.922502 | 13.17683 | 225 | 218 | 121 | 110 | 121 | 110 | 43 | c032 fab heavy chain | c032 fab light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 39 | 16 | 0.8 | HL | train |
7r8m_D_E | 7r8m | structure of the sars-cov-2 s 6p trimer in complex with neutralizing antibody c032 | no | viral protein/immune system | 2021-06-26 | 2021-08-04 | electron microscopy | 3.4 | N.A. | N.A. | 34331873 | 10.1016/j.immuni.2021.07.008 | 0 | auth_asym_id | VH:VL | IGHV5 | IGLV1 | D | E | EVQLVQSGAEVKKPGESLKISCKGSGYSFTSYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCARGVAVDWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSALYVFGTGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVQSGAEVKKPGESLKISCKGSGYSFTSYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCARGVAVDWYFDLWGRGTLVTVSSAS | VLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSALYVFGTGTKVTVL | 13.939118 | 13.263909 | 225 | 218 | 121 | 110 | 121 | 110 | 40 | c032 fab heavy chain | c032 fab light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 35 | 16 | 0.84 | HL | train |
7r8n_H_L | 7r8n | structure of the sars-cov-2 s 6p trimer in complex with neutralizing antibody c051 | no | viral protein/immune system | 2021-06-26 | 2021-08-04 | electron microscopy | 3.55 | N.A. | N.A. | 34331873 | 10.1016/j.immuni.2021.07.008 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV2 | H | L | EVQLVESGGGLIQAGGSLRLSCAASGFGVRNNYMSWVRQAPGKGLEWVSVIYSGGTTYYADSVKGRFTISRDNSKNTVFLQMNSLRAEDTAVYYCAREGDVEGFSDLWSGYSRDRYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT | QSVLTQPASVSGSPGQSITFSCTGTSSDVGGYNYVSWYQQYPGKAPKLLIYDVTNRPSGVSDRFSGSKSGNTASLTISGLQAEDEADYYCSSFTSSNTRVFGTGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLVESGGGLIQAGGSLRLSCAASGFGVRNNYMSWVRQAPGKGLEWVSVIYSGGTTYYADSVKGRFTISRDNSKNTVFLQMNSLRAEDTAVYYCAREGDVEGFSDLWSGYSRDRYYFDYWGQGTLVTVS | VLTQPASVSGSPGQSITFSCTGTSSDVGGYNYVSWYQQYPGKAPKLLIYDVTNRPSGVSDRFSGSKSGNTASLTISGLQAEDEADYYCSSFTSSNTRVFGTGTKVTVL | 14.847429 | 13.347319 | 237 | 216 | 129 | 108 | 129 | 108 | 52 | c051 fab heavy chain | c051 fab light chain | homo sapiens | homo sapiens | A;B | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 54;21 | 27;10 | 0.87;1.0 | HL | train |
7r8n_M_N | 7r8n | structure of the sars-cov-2 s 6p trimer in complex with neutralizing antibody c051 | no | viral protein/immune system | 2021-06-26 | 2021-08-04 | electron microscopy | 3.55 | N.A. | N.A. | 34331873 | 10.1016/j.immuni.2021.07.008 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV2 | M | N | EVQLVESGGGLIQAGGSLRLSCAASGFGVRNNYMSWVRQAPGKGLEWVSVIYSGGTTYYADSVKGRFTISRDNSKNTVFLQMNSLRAEDTAVYYCAREGDVEGFSDLWSGYSRDRYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT | QSVLTQPASVSGSPGQSITFSCTGTSSDVGGYNYVSWYQQYPGKAPKLLIYDVTNRPSGVSDRFSGSKSGNTASLTISGLQAEDEADYYCSSFTSSNTRVFGTGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLVESGGGLIQAGGSLRLSCAASGFGVRNNYMSWVRQAPGKGLEWVSVIYSGGTTYYADSVKGRFTISRDNSKNTVFLQMNSLRAEDTAVYYCAREGDVEGFSDLWSGYSRDRYYFDYWGQGTLVTVS | VLTQPASVSGSPGQSITFSCTGTSSDVGGYNYVSWYQQYPGKAPKLLIYDVTNRPSGVSDRFSGSKSGNTASLTISGLQAEDEADYYCSSFTSSNTRVFGTGTKVTVL | 14.83653 | 13.392942 | 237 | 216 | 129 | 108 | 129 | 108 | 54 | c051 fab heavy chain | c051 fab light chain | homo sapiens | homo sapiens | A;E | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 22;53 | 10;25 | 1.0;0.83 | HL | train |
7r8n_O_P | 7r8n | structure of the sars-cov-2 s 6p trimer in complex with neutralizing antibody c051 | no | viral protein/immune system | 2021-06-26 | 2021-08-04 | electron microscopy | 3.55 | N.A. | N.A. | 34331873 | 10.1016/j.immuni.2021.07.008 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV2 | O | P | EVQLVESGGGLIQAGGSLRLSCAASGFGVRNNYMSWVRQAPGKGLEWVSVIYSGGTTYYADSVKGRFTISRDNSKNTVFLQMNSLRAEDTAVYYCAREGDVEGFSDLWSGYSRDRYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT | QSVLTQPASVSGSPGQSITFSCTGTSSDVGGYNYVSWYQQYPGKAPKLLIYDVTNRPSGVSDRFSGSKSGNTASLTISGLQAEDEADYYCSSFTSSNTRVFGTGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLVESGGGLIQAGGSLRLSCAASGFGVRNNYMSWVRQAPGKGLEWVSVIYSGGTTYYADSVKGRFTISRDNSKNTVFLQMNSLRAEDTAVYYCAREGDVEGFSDLWSGYSRDRYYFDYWGQGTLVTVS | VLTQPASVSGSPGQSITFSCTGTSSDVGGYNYVSWYQQYPGKAPKLLIYDVTNRPSGVSDRFSGSKSGNTASLTISGLQAEDEADYYCSSFTSSNTRVFGTGTKVTVL | 14.841993 | 13.374969 | 237 | 216 | 129 | 108 | 129 | 108 | 53 | c051 fab heavy chain | c051 fab light chain | homo sapiens | homo sapiens | B;E | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 53;21 | 28;10 | 0.88;1.0 | HL | train |
7r8o_O_P | 7r8o | structure of the sars-cov-2 s 6p trimer in complex with neutralizing antibody c548 | no | viral protein/immune system | 2021-06-26 | 2021-08-04 | electron microscopy | 3.5 | N.A. | N.A. | 34331873 | 10.1016/j.immuni.2021.07.008 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV9 | O | P | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARREAYGPRDYYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT | QSALTQPPSASASLGASVTLTCTLSSGYSNYKVDWYQQRPGKGPRFVMRVGTGGIVGSKGDGIPDRFSVLGSGLNRYLTIKNIQEEDESDYHCGADQGSGSNFVGVFGGGTKLTVGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARREAYGPRDYYYYYGMDVWGQGT | SALTQPPSASASLGASVTLTCTLSSGYSNYKVDWYQQRPGKGPRFVMRVGTGGIVGSKGDGIPDRFSVLGSGLNRYLTIKNIQEEDESDYHCGADQGSGSNFVGVFGGGTKLTV | 14.318851 | 13.644286 | 232 | 221 | 120 | 114 | 120 | 114 | 57 | c548 fab heavy chain | c548 fab light chain | homo sapiens | homo sapiens | A;B | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 56;13 | 24;7 | 0.86;1.0 | HL | train |
7r8o_M_N | 7r8o | structure of the sars-cov-2 s 6p trimer in complex with neutralizing antibody c548 | no | viral protein/immune system | 2021-06-26 | 2021-08-04 | electron microscopy | 3.5 | N.A. | N.A. | 34331873 | 10.1016/j.immuni.2021.07.008 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV9 | M | N | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARREAYGPRDYYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT | QSALTQPPSASASLGASVTLTCTLSSGYSNYKVDWYQQRPGKGPRFVMRVGTGGIVGSKGDGIPDRFSVLGSGLNRYLTIKNIQEEDESDYHCGADQGSGSNFVGVFGGGTKLTVGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARREAYGPRDYYYYYGMDVWGQGT | SALTQPPSASASLGASVTLTCTLSSGYSNYKVDWYQQRPGKGPRFVMRVGTGGIVGSKGDGIPDRFSVLGSGLNRYLTIKNIQEEDESDYHCGADQGSGSNFVGVFGGGTKLTV | 14.318874 | 13.64535 | 232 | 221 | 120 | 114 | 120 | 114 | 57 | c548 fab heavy chain | c548 fab light chain | homo sapiens | homo sapiens | A;E | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 13;55 | 7;24 | 1.0;0.86 | HL | train |
7r8o_H_L | 7r8o | structure of the sars-cov-2 s 6p trimer in complex with neutralizing antibody c548 | no | viral protein/immune system | 2021-06-26 | 2021-08-04 | electron microscopy | 3.5 | N.A. | N.A. | 34331873 | 10.1016/j.immuni.2021.07.008 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV9 | H | L | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARREAYGPRDYYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT | QSALTQPPSASASLGASVTLTCTLSSGYSNYKVDWYQQRPGKGPRFVMRVGTGGIVGSKGDGIPDRFSVLGSGLNRYLTIKNIQEEDESDYHCGADQGSGSNFVGVFGGGTKLTVGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARREAYGPRDYYYYYGMDVWGQGT | SALTQPPSASASLGASVTLTCTLSSGYSNYKVDWYQQRPGKGPRFVMRVGTGGIVGSKGDGIPDRFSVLGSGLNRYLTIKNIQEEDESDYHCGADQGSGSNFVGVFGGGTKLTV | 14.314237 | 13.639359 | 232 | 221 | 120 | 114 | 120 | 114 | 58 | c548 fab heavy chain | c548 fab light chain | homo sapiens | homo sapiens | B;E | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 56;13 | 24;7 | 0.86;1.0 | HL | train |
7r87_C_D | 7r87 | the structure of human abcg5-wt/abcg8-i419e | yes | lipid transport/immune system | 2021-06-26 | 2021-09-08 | electron microscopy | 3.4 | N.A. | N.A. | 34404721 | 10.1073/pnas.2110483118 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | C | D | MGWSCIILFLVATATGVHSEVKLVESGGGLVQPGGSLRLSCATSGFTFSEFFMEWVRQPPGKRLEWVAVSRNEANDYTTDYSASVKGRFIVSRDTSQNILYLQMNALRAEDTAIYYCARDAWMGFDYWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH | MGWSCIILFLVATARTGVHSDIQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIQRLIYAAFSLDSGVPKRFSGSRSGSDYSLTISSLESEDLAHYYCLQYASYPCTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VKLVESGGGLVQPGGSLRLSCATSGFTFSEFFMEWVRQPPGKRLEWVAVSRNEANDYTTDYSASVKGRFIVSRDTSQNILYLQMNALRAEDTAIYYCARDAWMGFDYWGQGTTV | IQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIQRLIYAAFSLDSGVPKRFSGSRSGSDYSLTISSLESEDLAHYYCLQYASYPCTFGGGTKLEI | 13.398991 | 13.120466 | 245 | 234 | 114 | 105 | 114 | 105 | 39 | 2c7 fab heavy chain | 2c7 fab light chain | mus musculus | mus musculus | B | protein | atp-binding cassette sub-family g member 8 | homo sapiens | 38 | 15 | 0.83 | HL | train |
7r8a_C_D | 7r8a | the structure of human abcg5/abcg8 purified from mammalian cells | no | lipid transport | 2021-06-26 | 2021-09-08 | electron microscopy | 2.9 | N.A. | N.A. | 34404721 | 10.1073/pnas.2110483118 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | C | D | MGWSCIILFLVATATGVHSEVKLVESGGGLVQPGGSLRLSCATSGFTFSEFFMEWVRQPPGKRLEWVAVSRNEANDYTTDYSASVKGRFIVSRDTSQNILYLQMNALRAEDTAIYYCARDAWMGFDYWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH | MGWSCIILFLVATARTGVHSDIQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIQRLIYAAFSLDSGVPKRFSGSRSGSDYSLTISSLESEDLAHYYCLQYASYPCTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VKLVESGGGLVQPGGSLRLSCATSGFTFSEFFMEWVRQPPGKRLEWVAVSRNEANDYTTDYSASVKGRFIVSRDTSQNILYLQMNALRAEDTAIYYCARDAWMGFDYWGQGTTV | IQMTQSPSSLSASLGERVSLTCRASQEISGYLSWLQQKPDGTIQRLIYAAFSLDSGVPKRFSGSRSGSDYSLTISSLESEDLAHYYCLQYASYPCTFGGGTKLEI | 13.404308 | 13.176545 | 245 | 234 | 114 | 105 | 114 | 105 | 38 | 2c7 fab heavy chain | 2c7 fab light chain | mus musculus | mus musculus | B | protein | atp-binding cassette sub-family g member 8 | homo sapiens | 39 | 17 | 0.85 | HL | train |
7f6y_H_L | 7f6y | complex structure of antibody bd-503 and rbd-e484k of covid-19 | yes | viral protein/immune system | 2021-06-26 | 2022-06-29 | x-ray diffraction | 3 | 0.253 | 0.198 | 34480123 | 10.1038/s41422-021-00554-1 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLIQPGGSLRLSCAASGLIVSSNYMSWVRQAPGKGLEWVSVLYAGGSTDYAGSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDAAVYGIDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPLFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLIQPGGSLRLSCAASGLIVSSNYMSWVRQAPGKGLEWVSVLYAGGSTDYAGSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDAAVYGIDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPLFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.575315 | 22.375292 | 222 | 215 | 213 | 214 | 219 | 214 | 94 | heavy chain of bd-503 | light chain of bd-503 | homo sapiens | homo sapiens | R | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 69 | 23 | 0.7 | HL | train |
7f6z_H_L | 7f6z | complex structure of antibody bd-503 and rbd-501y.v2 of covid-19 | yes | viral protein/immune system | 2021-06-26 | 2022-06-29 | x-ray diffraction | 3 | 0.254 | 0.207 | 34480123 | 10.1038/s41422-021-00554-1 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLIQPGGSLRLSCAASGLIVSSNYMSWVRQAPGKGLEWVSVLYAGGSTDYAGSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDAAVYGIDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPLFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLIQPGGSLRLSCAASGLIVSSNYMSWVRQAPGKGLEWVSVLYAGGSTDYAGSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDAAVYGIDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPLFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.608713 | 22.404682 | 222 | 215 | 214 | 214 | 219 | 214 | 96 | heavy chain of bd-503 | light chain of bd-503 | homo sapiens | homo sapiens | R | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 63 | 24 | 0.75 | HL | train |
7r8u_C_D | 7r8u | lox-1 - structural and functional studies of a receptor implicated in atherosclerosis | no | signaling protein/immune system | 2021-06-27 | 2022-06-01 | x-ray diffraction | 1.9 | 0.218 | 0.186 | N.A. | N.A. | 0 | label_asym_id | FabH:FabL | IGHV1 | IGLV1 | C | D | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDFKYHTHQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCALVWGTQGKGVRGWDYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSXXXXXGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | QSVVTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | QVQLVQSGAEVKKPGASVKVSCKVSGYTLTELSMHWVRQAPGKGLEWMGGFDPEDFKYHTHQKFQGRVTMTEDTSTDTAYMELSSLRSEDTAVYYCALVWGTQGKGVRGWDYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSXXXXXGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | QSVVTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | 25.307426 | 20.73138 | 230 | 216 | 225 | 216 | 230 | 216 | 106 | antigen binding fragment, vh and ch1 | antibody light chain, kappa | homo sapiens | homo sapiens | A;B | protein;protein | oxidized low-density lipoprotein receptor 1;oxidized low-density lipoprotein receptor 1 | homo sapiens;homo sapiens | 39;26 | 17;6 | 0.94;0.38 | HL | train |
7ozt_A | 7ozt | nanobodies restore stability to cancer-associated mutants of tumor suppressor protein p16ink4a | no | cell cycle | 2021-06-28 | 2022-07-13 | x-ray diffraction | 1.74 | 0.209 | 0.18 | N.A. | N.A. | 0 | label_asym_id | VHH | IGHV3 | N.A. | A | N.A. | QVQLVESGGGLVQAGASLRLSCAASGSTYMFSISAMGWYRQAPGKQRELVAAITSGGGDTNYADSVKGRFTISRDRAKNMVYLQMNSLKPEDTAVYYCNFAPGLQSVRSGSWGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLVESGGGLVQAGASLRLSCAASGSTYMFSISAMGWYRQAPGKQRELVAAITSGGGDTNYADSVKGRFTISRDRAKNMVYLQMNSLKPEDTAVYYCNFAPGLQSVRSGSWGQGTQVTVSS | N.A. | 13.462241 | 0 | 132 | 0 | 122 | 0 | 122 | 0 | 0 | camelid nanobody nb09 | N.A. | lama glama | N.A. | B | protein | cyclin-dependent kinase inhibitor 2a | homo sapiens | 40 | 15 | 0.79 | H_only | train |
7r9d_H_L | 7r9d | crystal structure of nb_0 in complex with fab_8d3 | no | protein binding | 2021-06-29 | 2021-10-06 | x-ray diffraction | 1.83 | 0.211 | 0.18 | 34620716 | 10.1073/pnas.2115001118 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV4 | H | L | DVQLVESGGGLVQPGGSRKLSCAASGFTFSNFGMHWVRQAPEMGLEWVAYISSGSTTIYYGDTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCARRPLYDGDYGYPMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGS | NIMLTQSPSSLAVSAGERVTMSCKSTQSILYNSNQKTYLAWYQQKPGQSPKLLIYWASTRASGVPDRFTGSGSGTDFTLTINSVQPEDLAVYYCHQYLSAWTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | DVQLVESGGGLVQPGGSRKLSCAASGFTFSNFGMHWVRQAPEMGLEWVAYISSGSTTIYYGDTVKGRFTISRDNPKNTLFLQMTSLRSEDTAMYYCARRPLYDGDYGYPMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | NIMLTQSPSSLAVSAGERVTMSCKSTQSILYNSNQKTYLAWYQQKPGQSPKLLIYWASTRASGVPDRFTGSGSGTDFTLTINSVQPEDLAVYYCHQYLSAWTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 20.919964 | 24.19821 | 228 | 219 | 223 | 218 | 223 | 218 | 101 | fab 8d3 heavy chain | fab 8d3 light chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
7r9d_N | 7r9d | crystal structure of nb_0 in complex with fab_8d3 | no | protein binding | 2021-06-29 | 2021-10-06 | x-ray diffraction | 1.83 | 0.211 | 0.18 | 34620716 | 10.1073/pnas.2115001118 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLVEYGGGSVQAGGYLRLSCVASGSISLSSGMGWYRQAPGKERELVASISGGSSTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAASEQLTSGHAYWGQGTQVTVSSLEHHH | N.A. | QLVEYGGGSVQAGGYLRLSCVASGSISLSSGMGWYRQAPGKERELVASISGGSSTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAASEQLTSGHAYWGQGTQVTVSSLEHHH | N.A. | 14.265775 | 0 | 123 | 0 | 113 | 0 | 121 | 0 | 0 | nanobody n0 | N.A. | vicugna pacos | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7p00_H | 7p00 | human neurokinin 1 receptor (nk1r) substance p gq chimera (mgsqi) complex | yes | membrane protein | 2021-06-29 | 2021-12-15 | electron microscopy | 2.71 | N.A. | N.A. | 34878828 | 10.1126/sciadv.abk2872 | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | MKFLVNVALVFMVVYISYIYADYKDDDDKHHHHHHHHHHLEVLFQGPDVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAA | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.167944 | 0 | 298 | 0 | 232 | 0 | 247 | 0 | 0 | antibody fragment scfv16 | N.A. | mus musculus | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1,guanine nucleotide-binding protein g(s) subunit alpha isoforms short | homo sapiens;homo sapiens | 24;35 | 10;20 | 0.83;0.87 | H_only | train |
7p02_H | 7p02 | human neurokinin 1 receptor (nk1r) substance p gs complex | yes | membrane protein | 2021-06-29 | 2021-12-15 | electron microscopy | 2.87 | N.A. | N.A. | 34878828 | 10.1126/sciadv.abk2872 | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | MKFLVNVALVFMVVYISYIYADYKDDDDKHHHHHHHHHHLEVLFQGPDVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAA | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.18261 | 0 | 298 | 0 | 232 | 0 | 247 | 0 | 0 | antibody fragment scfv16 | N.A. | mus musculus | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1,guanine nucleotide-binding protein g(s) subunit alpha isoforms short | homo sapiens;homo sapiens | 25;35 | 10;20 | 0.77;0.87 | H_only | train |
7f7e_C_L | 7f7e | sars-cov-2 s protein rbd in complex with a5-10 fab | no | viral protein | 2021-06-29 | 2022-02-02 | x-ray diffraction | 2.49 | 0.256 | 0.214 | 35060840 | 10.1080/22221751.2022.2032374 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | C | L | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAIVGSGGSTYYADSVKGRFIISRDNSKNTLYLQMNSLRAEDTAVYYCAKSLIYGHYDILTGAYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | AQMTQSPSSVSASVGDRVTIPCRASQGIGNWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPPFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTK | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAIVGSGGSTYYADSVKGRFIISRDNSKNTLYLQMNSLRAEDTAVYYCAKSLIYGHYDILTGAYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | AQMTQSPSSVSASVGDRVTIPCRASQGIGNWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQANSFPPFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTK | 23.171888 | 21.65265 | 227 | 205 | 227 | 205 | 227 | 205 | 99 | heavy chain of a5-10 fab | light chain of a5-10 fab | homo sapiens | homo sapiens | E | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 32 | 16 | 1 | HL | train |
7ra3_E | 7ra3 | cryo-em of human gastric inhibitory polypeptide receptor gipr bound to gip | no | membrane protein | 2021-06-29 | 2022-04-13 | electron microscopy | 3.24 | N.A. | N.A. | 35333651 | 10.1073/pnas.2116506119 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFADVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.328384 | 0 | 297 | 0 | 232 | 0 | 246 | 0 | 0 | single-chain variable fragment 16 | N.A. | mus musculus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-3,isoform gnas-2 of guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 31;25 | 19;9 | 0.95;0.75 | H_only | train |
7ra3_N | 7ra3 | cryo-em of human gastric inhibitory polypeptide receptor gipr bound to gip | no | membrane protein | 2021-06-29 | 2022-04-13 | electron microscopy | 3.24 | N.A. | N.A. | 35333651 | 10.1073/pnas.2116506119 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.836105 | 0 | 160 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody 35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-3,isoform gnas-2 of guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 51;30 | 16;12 | 0.62;0.75 | H_only | train |
7f7h_A_B | 7f7h | sars-cov-2 s protein rbd in complex with a8-1 fab | no | viral protein/immune system | 2021-06-29 | 2022-06-15 | x-ray diffraction | 3.19 | 0.275 | 0.205 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | A | B | EVQLVESGGGLIQPGGSLRLSCAASGLTVSSNYMTWVRQAPGKGLEWVSVIYSGGSTFYAESVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLVVYGMDVWGQGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | IQLTQSPSFLSASVGDRVTITCRASQGISSDLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSHPLAFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | EVQLVESGGGLIQPGGSLRLSCAASGLTVSSNYMTWVRQAPGKGLEWVSVIYSGGSTFYAESVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLVVYGMDVWGQGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | IQLTQSPSFLSASVGDRVTITCRASQGISSDLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSHPLAFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.549078 | 21.533384 | 218 | 212 | 211 | 212 | 217 | 212 | 93 | heavy chain of a8-1 fab | light chain of a8-1 fab | homo sapiens | homo sapiens | E | protein | spike glycoprotein s1 | severe acute respiratory syndrome coronavirus 2 | 63 | 20 | 0.65 | HL | train |
7f7h_C_D | 7f7h | sars-cov-2 s protein rbd in complex with a8-1 fab | no | viral protein/immune system | 2021-06-29 | 2022-06-15 | x-ray diffraction | 3.19 | 0.275 | 0.205 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | C | D | EVQLVESGGGLIQPGGSLRLSCAASGLTVSSNYMTWVRQAPGKGLEWVSVIYSGGSTFYAESVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLVVYGMDVWGQGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | IQLTQSPSFLSASVGDRVTITCRASQGISSDLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSHPLAFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | EVQLVESGGGLIQPGGSLRLSCAASGLTVSSNYMTWVRQAPGKGLEWVSVIYSGGSTFYAESVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLVVYGMDVWGQGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | IQLTQSPSFLSASVGDRVTITCRASQGISSDLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSHPLAFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 23.090223 | 21.341814 | 218 | 212 | 218 | 210 | 218 | 210 | 95 | heavy chain of a8-1 fab | light chain of a8-1 fab | homo sapiens | homo sapiens | F | protein | spike glycoprotein s1 | severe acute respiratory syndrome coronavirus 2 | 63 | 22 | 0.67 | HL | train |
7ra8_H_L | 7ra8 | sars-cov-2 s glycoprotein in complex with s2x259 fab | yes | viral protein/immune system | 2021-06-30 | 2021-08-04 | electron microscopy | 3.1 | N.A. | N.A. | 34280951 | 10.1038/s41586-021-03817-4 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV1 | H | L | QVQLVQSGAEVKKPGSSVKVSCKASGGIFNTYTISWVRQAPGQGLEWMGRIILMSGMANYAQKIQGRVTITADKSTSTAYMELTSLRSDDTAVYYCARGFNGNYYGWGDDDAFDIWGQGTLVTVYS | QTVLTQPPSVSGAPGQRVTISCTGSNSNIGAGYDVHWYQQLPGTAPKLLICGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGPNWVFGGGTKLTVL | VQLVQSGAEVKKPGSSVKVSCKASGGIFNTYTISWVRQAPGQGLEWMGRIILMSGMANYAQKIQGRVTITADKSTSTAYMELTSLRSDDTAVYYCARGFNGNYYGWGDDDAFDIWGQGTLVTV | VLTQPPSVSGAPGQRVTISCTGSNSNIGAGYDVHWYQQLPGTAPKLLICGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGPNWVFGGGTKL | 13.8575 | 13.036968 | 126 | 113 | 119 | 99 | 123 | 108 | 48 | heavy chain fab s2x259 fab variable domain | light chain fab s2x259 fab variable domain | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 57 | 26 | 0.87 | HL | train |
7ra8_C_D | 7ra8 | sars-cov-2 s glycoprotein in complex with s2x259 fab | yes | viral protein/immune system | 2021-06-30 | 2021-08-04 | electron microscopy | 3.1 | N.A. | N.A. | 34280951 | 10.1038/s41586-021-03817-4 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV1 | C | D | QVQLVQSGAEVKKPGSSVKVSCKASGGIFNTYTISWVRQAPGQGLEWMGRIILMSGMANYAQKIQGRVTITADKSTSTAYMELTSLRSDDTAVYYCARGFNGNYYGWGDDDAFDIWGQGTLVTVYS | QTVLTQPPSVSGAPGQRVTISCTGSNSNIGAGYDVHWYQQLPGTAPKLLICGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGPNWVFGGGTKLTVL | VQLVQSGAEVKKPGSSVKVSCKASGGIFNTYTISWVRQAPGQGLEWMGRIILMSGMANYAQKIQGRVTITADKSTSTAYMELTSLRSDDTAVYYCARGFNGNYYGWGDDDAFDIWGQGTLVTV | VLTQPPSVSGAPGQRVTISCTGSNSNIGAGYDVHWYQQLPGTAPKLLICGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGPNWVFGGGTKL | 13.858267 | 13.036955 | 126 | 113 | 119 | 99 | 123 | 108 | 48 | heavy chain fab s2x259 fab variable domain | light chain fab s2x259 fab variable domain | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 57 | 26 | 0.87 | HL | train |
7ra8_F_G | 7ra8 | sars-cov-2 s glycoprotein in complex with s2x259 fab | yes | viral protein/immune system | 2021-06-30 | 2021-08-04 | electron microscopy | 3.1 | N.A. | N.A. | 34280951 | 10.1038/s41586-021-03817-4 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV1 | F | G | QVQLVQSGAEVKKPGSSVKVSCKASGGIFNTYTISWVRQAPGQGLEWMGRIILMSGMANYAQKIQGRVTITADKSTSTAYMELTSLRSDDTAVYYCARGFNGNYYGWGDDDAFDIWGQGTLVTVYS | QTVLTQPPSVSGAPGQRVTISCTGSNSNIGAGYDVHWYQQLPGTAPKLLICGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGPNWVFGGGTKLTVL | VQLVQSGAEVKKPGSSVKVSCKASGGIFNTYTISWVRQAPGQGLEWMGRIILMSGMANYAQKIQGRVTITADKSTSTAYMELTSLRSDDTAVYYCARGFNGNYYGWGDDDAFDIWGQGTLVTV | VLTQPPSVSGAPGQRVTISCTGSNSNIGAGYDVHWYQQLPGTAPKLLICGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGPNWVFGGGTKL | 13.857546 | 13.036962 | 126 | 113 | 119 | 99 | 123 | 108 | 48 | heavy chain fab s2x259 fab variable domain | light chain fab s2x259 fab variable domain | homo sapiens | homo sapiens | E | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 57 | 26 | 0.87 | HL | train |
7p16_B | 7p16 | structure of caspase-3 cleaved rxkr9 in complex with a sybody at 4.3a | no | membrane protein | 2021-07-01 | 2021-07-28 | electron microscopy | 4.3 | N.A. | N.A. | 34263724 | 10.7554/eLife.69800 | 0 | auth_asym_id | VH | IGHV3 | N.A. | B | N.A. | SQVQLVESGGGSVQAGGSLRLSCAASGNIADIYYLGWFRQAPGKEREGVAALITYNGRTYYADSVKGRFTVSLDNAKNTVYLQMNSLKPEDTALYYCAAAYNGLIAAPLKVTRYWYWGQGTQVTVS | N.A. | SQVQLVESGGGSVQAGGSLRLSCAASGNIADIYYLGWFRQAPGKEREGVAALITYNGRTYYADSVKGRFTVSLDNAKNTVYLQMNSLKPEDTALYYCAAAYNGLIAAPLKVTRYWYWGQGTQVTVS | N.A. | 13.9771 | 0 | 126 | 0 | 126 | 0 | 126 | 0 | 0 | sybody | N.A. | synthetic construct | N.A. | A | protein | xk-related protein | rattus norvegicus | 31 | 13 | 1 | H_only | train |
7ral_H_L | 7ral | sars-cov-2 s bound to s2x259 fab (local refinement of the rbd/s2x259 variable domains) | yes | viral protein/immune system | 2021-07-01 | 2021-08-04 | electron microscopy | 3.7 | N.A. | N.A. | 34280951 | 10.1038/s41586-021-03817-4 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV1 | H | L | QVQLVQSGAEVKKPGSSVKVSCKASGGIFNTYTISWVRQAPGQGLEWMGRIILMSGMANYAQKIQGRVTITADKSTSTAYMELTSLRSDDTAVYYCARGFNGNYYGWGDDDAFDIWGQGTLVTVYS | QTVLTQPPSVSGAPGQRVTISCTGSNSNIGAGYDVHWYQQLPGTAPKLLICGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGPNWVFGGGTKLTVL | VQLVQSGAEVKKPGSSVKVSCKASGGIFNTYTISWVRQAPGQGLEWMGRIILMSGMANYAQKIQGRVTITADKSTSTAYMELTSLRSDDTAVYYCARGFNGNYYGWGDDDAFDIWGQGTLVTV | VLTQPPSVSGAPGQRVTISCTGSNSNIGAGYDVHWYQQLPGTAPKLLICGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGPNWVFGGGTKL | 13.863403 | 13.055422 | 126 | 113 | 119 | 99 | 123 | 108 | 48 | s2x259 fab heavy chain | s2x259 fab light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 57 | 25 | 0.86 | HL | train |
7rah_B_A | 7rah | adenylate cyclase toxin rtx domain fragment bound to m1h5 fab and m2b10 fab | no | immune system/toxin | 2021-07-01 | 2021-09-15 | x-ray diffraction | 2.6 | 0.218 | 0.195 | 34547035 | 10.1371/journal.ppat.1009920 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | B | A | EVNLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCAREIMRGGGYYFDYWSQGTTLTVSSRSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ | DIQMIQSTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPYTFGGGTKLEIKRTADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | VNLVESGGDLVKPGGSLKLSCAASGFTFSSYGMSWVRQTPDKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCAREIMRGGGYYFDYWSQGTTLTVSSRSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMIQSTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSRLHSGVPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPYTFGGGTKLEIKRTADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | 21.67703 | 23.304445 | 233 | 215 | 223 | 215 | 223 | 215 | 103 | m1h5 fab heavy chain | m1h5 fab light chain | mus musculus | mus musculus | E | protein | bifunctional adenylate cyclase toxin/hemolysin cyaa,bifunctional adenylate cyclase toxin/hemolysin cyaa | bordetella pertussis | 50 | 22 | 0.81 | HL | train |
7rah_D_C | 7rah | adenylate cyclase toxin rtx domain fragment bound to m1h5 fab and m2b10 fab | no | immune system/toxin | 2021-07-01 | 2021-09-15 | x-ray diffraction | 2.6 | 0.218 | 0.195 | 34547035 | 10.1371/journal.ppat.1009920 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | D | C | EVQLQQSGAELVRPGTSVKVSCKASGYAFTNYLIEWVKQRPGQGLEWIGVINPGIGNTNYNEKFKGKATLTADKSSSTVYMQLSSLTSDDSAVYFCARGLNYGSSQHWYFDVWGAGTSVTVSSRSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ | IVMTQSPAILSASLGERVTMTCTASSSVSSSYLHWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCHQYHRSPPTFGAGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLQQSGAELVRPGTSVKVSCKASGYAFTNYLIEWVKQRPGQGLEWIGVINPGIGNTNYNEKFKGKATLTADKSSSTVYMQLSSLTSDDSAVYFCARGLNYGSSQHWYFDVWGAGTSVTVSSRSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDK | IVMTQSPAILSASLGERVTMTCTASSSVSSSYLHWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCHQYHRSPPTFGAGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTK | 21.306862 | 20.689995 | 235 | 214 | 199 | 185 | 218 | 207 | 82 | m2b10 fab heavy chain | m2b10 fab light chain | mus musculus | mus musculus | E | protein | bifunctional adenylate cyclase toxin/hemolysin cyaa,bifunctional adenylate cyclase toxin/hemolysin cyaa | bordetella pertussis | 38 | 20 | 0.87 | HL | train |
7rai_H_L | 7rai | cryo-em structure of m4008_n1 fab in complex with bg505 ds-sosip.664 env trimer | yes | immune system | 2021-07-01 | 2021-11-17 | electron microscopy | 3.24 | N.A. | N.A. | 34753944 | 10.1038/s41467-021-26846-z | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | H | L | QSQLVQSGAEMKTSGSSVRVSCKDSGGFFPYAGFRWVRQAPGQGFEWMGGVIPADGTKHYAPKFQARMKMTVVESSRTLYMELRSLTSTDTATYFCARLQCAGFSCEMDSGPFDLWGQGTQVTVPSSGASASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPAPELLGGPSVFLFPQNPRKPS | DIQMTQSPSTVAAFVGGNVTLSCRTSQGVGNRLAWYQQKPGKPPRLLISRASNRHGGVPARFSGGGSGTIFTLTIKGLQSDDFATFFCQQYYDSRETFGQGSRVMMEKIRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QLVQSGAEMKTSGSSVRVSCKDSGGFFPYAGFRWVRQAPGQGFEWMGGVIPADGTKHYAPKFQARMKMTVVESSRTLYMELRSLTSTDTATYFCARLQCAGFSCEMDSGPFDLWGQGTQVTVPS | DIQMTQSPSTVAAFVGGNVTLSCRTSQGVGNRLAWYQQKPGKPPRLLISRASNRHGGVPARFSGGGSGTIFTLTIKGLQSDDFATFFCQQYYDSRETFGQGSRVMMEK | 13.894882 | 13.323805 | 264 | 216 | 124 | 108 | 124 | 108 | 45 | m4008_n1 fab heavy chain | m4008_n1 fab light chain | homo sapiens | homo sapiens | A;C | protein;protein | envelope glycoprotein gp160;envelope glycoprotein gp160 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 44;19 | 20;5 | 1.0;0.5 | HL | train |
7rai_J_N | 7rai | cryo-em structure of m4008_n1 fab in complex with bg505 ds-sosip.664 env trimer | yes | immune system | 2021-07-01 | 2021-11-17 | electron microscopy | 3.24 | N.A. | N.A. | 34753944 | 10.1038/s41467-021-26846-z | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | J | N | QSQLVQSGAEMKTSGSSVRVSCKDSGGFFPYAGFRWVRQAPGQGFEWMGGVIPADGTKHYAPKFQARMKMTVVESSRTLYMELRSLTSTDTATYFCARLQCAGFSCEMDSGPFDLWGQGTQVTVPSSGASASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPAPELLGGPSVFLFPQNPRKPS | DIQMTQSPSTVAAFVGGNVTLSCRTSQGVGNRLAWYQQKPGKPPRLLISRASNRHGGVPARFSGGGSGTIFTLTIKGLQSDDFATFFCQQYYDSRETFGQGSRVMMEKIRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QLVQSGAEMKTSGSSVRVSCKDSGGFFPYAGFRWVRQAPGQGFEWMGGVIPADGTKHYAPKFQARMKMTVVESSRTLYMELRSLTSTDTATYFCARLQCAGFSCEMDSGPFDLWGQGTQVTVPS | DIQMTQSPSTVAAFVGGNVTLSCRTSQGVGNRLAWYQQKPGKPPRLLISRASNRHGGVPARFSGGGSGTIFTLTIKGLQSDDFATFFCQQYYDSRETFGQGSRVMMEK | 13.889371 | 13.317766 | 264 | 216 | 124 | 108 | 124 | 108 | 43 | m4008_n1 fab heavy chain | m4008_n1 fab light chain | homo sapiens | homo sapiens | A;E | protein;protein | envelope glycoprotein gp160;envelope glycoprotein gp160 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 19;45 | 5;21 | 0.5;1.0 | HL | train |
7rai_I_M | 7rai | cryo-em structure of m4008_n1 fab in complex with bg505 ds-sosip.664 env trimer | yes | immune system | 2021-07-01 | 2021-11-17 | electron microscopy | 3.24 | N.A. | N.A. | 34753944 | 10.1038/s41467-021-26846-z | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | I | M | QSQLVQSGAEMKTSGSSVRVSCKDSGGFFPYAGFRWVRQAPGQGFEWMGGVIPADGTKHYAPKFQARMKMTVVESSRTLYMELRSLTSTDTATYFCARLQCAGFSCEMDSGPFDLWGQGTQVTVPSSGASASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPAPELLGGPSVFLFPQNPRKPS | DIQMTQSPSTVAAFVGGNVTLSCRTSQGVGNRLAWYQQKPGKPPRLLISRASNRHGGVPARFSGGGSGTIFTLTIKGLQSDDFATFFCQQYYDSRETFGQGSRVMMEKIRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QLVQSGAEMKTSGSSVRVSCKDSGGFFPYAGFRWVRQAPGQGFEWMGGVIPADGTKHYAPKFQARMKMTVVESSRTLYMELRSLTSTDTATYFCARLQCAGFSCEMDSGPFDLWGQGTQVTVPS | DIQMTQSPSTVAAFVGGNVTLSCRTSQGVGNRLAWYQQKPGKPPRLLISRASNRHGGVPARFSGGGSGTIFTLTIKGLQSDDFATFFCQQYYDSRETFGQGSRVMMEK | 13.891508 | 13.322921 | 264 | 216 | 124 | 108 | 124 | 108 | 45 | m4008_n1 fab heavy chain | m4008_n1 fab light chain | homo sapiens | homo sapiens | C;E | protein;protein | envelope glycoprotein gp160;envelope glycoprotein gp160 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 45;18 | 21;5 | 1.0;0.5 | HL | train |
7raq_H_L | 7raq | crystal structure of cv3-25 fab bound to sars-cov-2 spike stem helix peptide | no | immune system | 2021-07-02 | 2022-04-13 | x-ray diffraction | 1.74 | 0.203 | 0.181 | 35411021 | 10.1038/s42003-022-03262-7 | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGKV1 | H | L | QVQLVESGAEVKKPGESLKISCKGSGYTFTRYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGHVTISADKSISTAYLQWNSLKASDTAMYYCARLPQYCSNGVCQRWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH | EIVLTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQGNSFPYTFGQGTNLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVESGAEVKKPGESLKISCKGSGYTFTRYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGHVTISADKSISTAYLQWNSLKASDTAMYYCARLPQYCSNGVCQRWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | EIVLTQSPSSVSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQGNSFPYTFGQGTNLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 21.465973 | 23.45429 | 232 | 214 | 226 | 213 | 226 | 213 | 103 | cv3-25 fab heavy chain | cv3-25 fab light chain | homo sapiens | homo sapiens | P | peptide | spike stem helix peptide | severe acute respiratory syndrome coronavirus 2 | 36 | 20 | 0.87 | HL | train |
7ran_E | 7ran | 5-ht2ar bound to a novel agonist in complex with a mini-gq protein and an active-state stabilizing single-chain variable fragment (scfv16) obtained by cryo-electron microscopy (cryoem) | no | membrane protein | 2021-07-02 | 2022-07-06 | electron microscopy | 3.45 | N.A. | N.A. | 36171289 | 10.1038/s41586-022-05258-z | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFADVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 18.008257 | 0 | 286 | 0 | 228 | 0 | 246 | 0 | 0 | single-chain variable fragment 16 (scfv16) | N.A. | homo sapiens | N.A. | B;C | protein;protein | g protein subunit q (gi2-mini-gq chimera);guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 26;17 | 17;6 | 1.0;0.75 | H_only | train |
7f9y_N | 7f9y | ghrelin-bound ghrelin receptor in complex with gq | no | membrane protein | 2021-07-05 | 2021-08-18 | electron microscopy | 2.9 | N.A. | N.A. | 34417468 | 10.1038/s41467-021-25364-2 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.866457 | 0 | 140 | 0 | 128 | 0 | 128 | 0 | 0 | nb35 | N.A. | lama glama | N.A. | A;B | protein;protein | engineered g-alpha-q subunit;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 39;35 | 12;12 | 0.6;0.67 | H_only | train |
7f9z_E | 7f9z | ghrp-6-bound ghrelin receptor in complex with gq | no | membrane protein | 2021-07-05 | 2021-08-18 | electron microscopy | 3.2 | N.A. | N.A. | 34417468 | 10.1038/s41467-021-25364-2 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELLEENLYFQGASHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.254162 | 0 | 304 | 0 | 231 | 0 | 247 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | A;B | protein;protein | engineered g-alpha-q;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 26;26 | 16;12 | 0.89;0.86 | H_only | train |
7f9z_N | 7f9z | ghrp-6-bound ghrelin receptor in complex with gq | no | membrane protein | 2021-07-05 | 2021-08-18 | electron microscopy | 3.2 | N.A. | N.A. | 34417468 | 10.1038/s41467-021-25364-2 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.789455 | 0 | 140 | 0 | 128 | 0 | 128 | 0 | 0 | nb35 | N.A. | lama glama | N.A. | A;B | protein;protein | engineered g-alpha-q;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 47;34 | 12;12 | 0.5;0.71 | H_only | train |
7p2d_C | 7p2d | structure of alphambeta2/cd11bcd18 headpiece in complex with a nanobody | no | immune system | 2021-07-05 | 2022-05-04 | x-ray diffraction | 3.2 | 0.295 | 0.261 | 35738398 | 10.1016/j.jbc.2022.102168 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | MQVQLVETGGGLVQAGGSLRLSCAASGNINSFNAMGWFRQAPGKQRELVAAITFGGRTNYADSVKGRFTISRDNTKGSVYLQMNSLKPEDTAVYYCAASENNLLTGVWHYWGRGTQVTVSSLEHHHHHH | N.A. | MQVQLVETGGGLVQAGGSLRLSCAASGNINSFNAMGWFRQAPGKQRELVAAITFGGRTNYADSVKGRFTISRDNTKGSVYLQMNSLKPEDTAVYYCAASENNLLTGVWHYWGRGTQVTVSS | N.A. | 13.701165 | 0 | 129 | 0 | 121 | 0 | 121 | 0 | 0 | hcd11bnb1 nanobody | N.A. | lama glama | N.A. | A | protein | isoform 2 of integrin alpha-m | homo sapiens | 31 | 14 | 0.93 | H_only | train |
7faf_d_c | 7faf | s protein of sars-cov-2 in complex bound with p36-5d2 (state1) | yes | viral protein/immune system | 2021-07-06 | 2021-12-22 | electron microscopy | 3.69 | N.A. | N.A. | 34966387 | 10.3389/fimmu.2021.766821 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | d | c | MGWSCIILFLVATATGVHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTTYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCAGGGGRRLQFDYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQY... | MGWSCIILFLVATATGVHSDIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYDASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNGYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKVSCKASGYTFTTYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCAGGGGRRLQFDYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYDASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNGYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 23.002453 | 22.851791 | 471 | 233 | 222 | 212 | 222 | 212 | 79 | p36-5d2 heavy chain | p36-5d2 light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 42 | 20 | 0.87 | HL | train |
7faf_g_f | 7faf | s protein of sars-cov-2 in complex bound with p36-5d2 (state1) | yes | viral protein/immune system | 2021-07-06 | 2021-12-22 | electron microscopy | 3.69 | N.A. | N.A. | 34966387 | 10.3389/fimmu.2021.766821 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | g | f | MGWSCIILFLVATATGVHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTTYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCAGGGGRRLQFDYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQY... | MGWSCIILFLVATATGVHSDIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYDASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNGYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKVSCKASGYTFTTYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCAGGGGRRLQFDYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYDASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNGYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 23.002457 | 22.866545 | 471 | 233 | 222 | 212 | 222 | 212 | 75 | p36-5d2 heavy chain | p36-5d2 light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 37 | 17 | 0.89 | HL | train |
7faf_H_L | 7faf | s protein of sars-cov-2 in complex bound with p36-5d2 (state1) | yes | viral protein/immune system | 2021-07-06 | 2021-12-22 | electron microscopy | 3.69 | N.A. | N.A. | 34966387 | 10.3389/fimmu.2021.766821 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | MGWSCIILFLVATATGVHSQVQLVQSGAEVKKPGASVKVSCKASGYTFTTYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCAGGGGRRLQFDYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQY... | MGWSCIILFLVATATGVHSDIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYDASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNGYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKVSCKASGYTFTTYAMHWVRQAPGQRLEWMGWINAGNGNTKYSQKFQGRVTITRDTSASTAYMELSSLRSEDTAVYYCAGGGGRRLQFDYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYDASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNGYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 23.004757 | 22.866749 | 471 | 233 | 222 | 212 | 222 | 212 | 91 | p36-5d2 heavy chain | p36-5d2 light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 32 | 14 | 0.88 | HL | train |
7rbt_E | 7rbt | cryo-em structure of human gastric inhibitory polypeptide receptor gipr bound to tirzepatide | no | membrane protein | 2021-07-06 | 2022-04-13 | electron microscopy | 3.08 | N.A. | N.A. | 35333651 | 10.1073/pnas.2116506119 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFADVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.308874 | 0 | 297 | 0 | 232 | 0 | 246 | 0 | 0 | single-chain variable fragment 16 | N.A. | mus musculus | N.A. | A;B | protein;protein | isoform gnas-2 of guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 36;23 | 23;10 | 0.92;0.83 | H_only | train |
7rbt_N | 7rbt | cryo-em structure of human gastric inhibitory polypeptide receptor gipr bound to tirzepatide | no | membrane protein | 2021-07-06 | 2022-04-13 | electron microscopy | 3.08 | N.A. | N.A. | 35333651 | 10.1073/pnas.2116506119 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.791211 | 0 | 160 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody 35 | N.A. | lama glama | N.A. | A;B | protein;protein | isoform gnas-2 of guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 43;31 | 11;12 | 0.55;0.75 | H_only | train |
7fah_H_L | 7fah | immune complex of head region of ca09 ha and neutralizing antibody 12h5 | no | viral protein/immune system | 2021-07-06 | 2022-07-06 | x-ray diffraction | 3.15 | 0.289 | 0.266 | 36056024 | 10.1038/s41467-022-32926-5 | 0 | auth_asym_id | FabH:FabL | IGHV7 | IGKV7 | H | L | QIQLVQSGPELKKPGETVRISCKASGYTFTKNGMNWVQQAPGKGLKWVGWINTYTGEPSYADDFKGRFAFSLETSASTAYLQINNLKNEDMAAYFCARMVRDAMDFWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPR | DIVLTQSPASLAVSLGQRATISCKASQSVDFDGYNYLNWYQQKPGQPPKLLIYAASNLESGIPARFSGSGSGTDFTLNIHPVEEEDAATYFCQQSNEDPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | QIQLVQSGPELKKPGETVRISCKASGYTFTKNGMNWVQQAPGKGLKWVGWINTYTGEPSYADDFKGRFAFSLETSASTAYLQINNLKNEDMAAYFCARMVRDAMDFWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPR | DIVLTQSPASLAVSLGQRATISCKASQSVDFDGYNYLNWYQQKPGQPPKLLIYAASNLESGIPARFSGSGSGTDFTLNIHPVEEEDAATYFCQQSNEDPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | 21.63145 | 23.40171 | 217 | 218 | 217 | 215 | 217 | 215 | 93 | heavy chain of antibody 12h5 | light chain of antibody 12h5 | mus musculus | mus musculus | A | protein | hemagglutinin | influenza a virus (strain swl a/california/04/2009 h1n1) | 44 | 18 | 0.78 | HL | train |
7fah_C_D | 7fah | immune complex of head region of ca09 ha and neutralizing antibody 12h5 | no | viral protein/immune system | 2021-07-06 | 2022-07-06 | x-ray diffraction | 3.15 | 0.289 | 0.266 | 36056024 | 10.1038/s41467-022-32926-5 | 0 | auth_asym_id | FabH:FabL | IGHV7 | IGKV7 | C | D | QIQLVQSGPELKKPGETVRISCKASGYTFTKNGMNWVQQAPGKGLKWVGWINTYTGEPSYADDFKGRFAFSLETSASTAYLQINNLKNEDMAAYFCARMVRDAMDFWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPR | DIVLTQSPASLAVSLGQRATISCKASQSVDFDGYNYLNWYQQKPGQPPKLLIYAASNLESGIPARFSGSGSGTDFTLNIHPVEEEDAATYFCQQSNEDPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | QIQLVQSGPELKKPGETVRISCKASGYTFTKNGMNWVQQAPGKGLKWVGWINTYTGEPSYADDFKGRFAFSLETSASTAYLQINNLKNEDMAAYFCARMVRDAMDFWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPR | DIVLTQSPASLAVSLGQRATISCKASQSVDFDGYNYLNWYQQKPGQPPKLLIYAASNLESGIPARFSGSGSGTDFTLNIHPVEEEDAATYFCQQSNEDPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | 21.637112 | 23.400599 | 217 | 218 | 217 | 215 | 217 | 215 | 92 | heavy chain of antibody 12h5 | light chain of antibody 12h5 | mus musculus | mus musculus | B | protein | hemagglutinin | influenza a virus (strain swl a/california/04/2009 h1n1) | 42 | 17 | 0.77 | HL | train |
7rco_D_C | 7rco | crystal structure of human tgf-beta-2 bound to 4a11.v2 fab | no | immune system | 2021-07-07 | 2021-09-29 | x-ray diffraction | 2.9 | 0.286 | 0.208 | 34785671 | 10.1038/s41598-021-01530-w | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | D | C | EQQLVESGGGLVQPGGSLRLSCAVSGFSLSSYTVNWVRQAPGKGLEWIGYISYGGSAYYASWANGRFTISKDSAKNSVYLQMNSLRAEDTAVYFCARHMQVGGAPTGSMAAFDPWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | DAQLTQSPSSLSASVGDRVTITCQSSQSVYNNNYLSWFQQKPGKPPKLLIYGASTLTSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCAGGYSGSSDKYAFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QQLVESGGGLVQPGGSLRLSCAVSGFSLSSYTVNWVRQAPGKGLEWIGYISYGGSAYYASWANGRFTISKDSAKNSVYLQMNSLRAEDTAVYFCARHMQVGGAPTGSMAAFDPWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | AQLTQSPSSLSASVGDRVTITCQSSQSVYNNNYLSWFQQKPGKPPKLLIYGASTLTSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCAGGYSGSSDKYAFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 20.74762 | 23.595934 | 233 | 219 | 216 | 217 | 224 | 217 | 104 | 4a11.v2 fab heavy chain | 4a11.v2 fab light chain | homo sapiens | homo sapiens | A;B | protein;protein | transforming growth factor beta-2;transforming growth factor beta-2 | homo sapiens;homo sapiens | 25;34 | 10;20 | 0.77;0.87 | HL | train |
7rco_F_E | 7rco | crystal structure of human tgf-beta-2 bound to 4a11.v2 fab | no | immune system | 2021-07-07 | 2021-09-29 | x-ray diffraction | 2.9 | 0.286 | 0.208 | 34785671 | 10.1038/s41598-021-01530-w | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | F | E | EQQLVESGGGLVQPGGSLRLSCAVSGFSLSSYTVNWVRQAPGKGLEWIGYISYGGSAYYASWANGRFTISKDSAKNSVYLQMNSLRAEDTAVYFCARHMQVGGAPTGSMAAFDPWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | DAQLTQSPSSLSASVGDRVTITCQSSQSVYNNNYLSWFQQKPGKPPKLLIYGASTLTSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCAGGYSGSSDKYAFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QQLVESGGGLVQPGGSLRLSCAVSGFSLSSYTVNWVRQAPGKGLEWIGYISYGGSAYYASWANGRFTISKDSAKNSVYLQMNSLRAEDTAVYFCARHMQVGGAPTGSMAAFDPWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | AQLTQSPSSLSASVGDRVTITCQSSQSVYNNNYLSWFQQKPGKPPKLLIYGASTLTSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCAGGYSGSSDKYAFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP | 20.858603 | 23.047325 | 233 | 219 | 216 | 204 | 224 | 208 | 100 | 4a11.v2 fab heavy chain | 4a11.v2 fab light chain | homo sapiens | homo sapiens | A;B | protein;protein | transforming growth factor beta-2;transforming growth factor beta-2 | homo sapiens;homo sapiens | 37;24 | 22;11 | 0.88;0.85 | HL | train |
7fat_B | 7fat | structure determination of the rbd-nb1a7 | no | structural protein | 2021-07-07 | 2022-05-18 | x-ray diffraction | 1.99 | 0.242 | 0.193 | N.A. | 10.1016/j.str.2022.02.011 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLQESGGGSVQAGGSLRLSCAASGYTFSSYCLGWFRQAPGKEREGVAAIDSDGSTSYADSVKGRFTISRDNAKNTLYLQMNSLKPEDTAMYYCAAEGGPSLSYCTGGYGFLLSGLMYNSWGQGTQVTVSSHHHHHH | N.A. | QVQLQESGGGSVQAGGSLRLSCAASGYTFSSYCLGWFRQAPGKEREGVAAIDSDGSTSYADSVKGRFTISRDNAKNTLYLQMNSLKPEDTAMYYCAAEGGPSLSYCTGGYGFLLSGLMYNSWGQGTQVTVSS | N.A. | 13.867378 | 0 | 138 | 0 | 132 | 0 | 132 | 0 | 0 | nb_1a7 | N.A. | camelus bactrianus | N.A. | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 46 | 20 | 0.95 | H_only | train |
7fau_B | 7fau | structure determination of the nb1b11-rbd complex | no | structural protein | 2021-07-07 | 2022-06-01 | x-ray diffraction | 2.08 | 0.228 | 0.198 | 35276082 | 10.1016/j.str.2022.02.011 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLQESGGGSVQAGGSLRLSCAASGYTVSVGCMAWFRQAPGKEREGVAGIDASGITKYSDSVKGRFTISKDNAKNALDLQMNGLKPEDTAMYHCAAGLVRGSCTDVLDHPSYLGVWGQGTQVTVSS | N.A. | VQLQESGGGSVQAGGSLRLSCAASGYTVSVGCMAWFRQAPGKEREGVAGIDASGITKYSDSVKGRFTISKDNAKNALDLQMNGLKPEDTAMYHCAAGLVRGSCTDVLDHPSYLGVWGQGTQVTVSS | N.A. | 13.385163 | 0 | 127 | 0 | 126 | 0 | 126 | 0 | 0 | nb_1b11 | N.A. | camelidae | N.A. | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 47 | 13 | 0.54 | H_only | train |
7fau_D | 7fau | structure determination of the nb1b11-rbd complex | no | structural protein | 2021-07-07 | 2022-06-01 | x-ray diffraction | 2.08 | 0.228 | 0.198 | 35276082 | 10.1016/j.str.2022.02.011 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | QVQLQESGGGSVQAGGSLRLSCAASGYTVSVGCMAWFRQAPGKEREGVAGIDASGITKYSDSVKGRFTISKDNAKNALDLQMNGLKPEDTAMYHCAAGLVRGSCTDVLDHPSYLGVWGQGTQVTVSS | N.A. | VQLQESGGGSVQAGGSLRLSCAASGYTVSVGCMAWFRQAPGKEREGVAGIDASGITKYSDSVKGRFTISKDNAKNALDLQMNGLKPEDTAMYHCAAGLVRGSCTDVLDHPSYLGVWGQGTQVTVSS | N.A. | 13.383966 | 0 | 127 | 0 | 126 | 0 | 126 | 0 | 0 | nb_1b11 | N.A. | camelidae | N.A. | C | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 47 | 15 | 0.62 | H_only | train |
7p40_F_B | 7p40 | p5c3 is a potent fab neutralizer | no | viral protein | 2021-07-09 | 2021-10-13 | electron microscopy | 3.5 | N.A. | N.A. | 34599871 | 10.1016/j.celrep.2021.109814 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | F | B | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSSAVQWVRQARGQRLEWIGWIVVGSGNTDYAQQFQERVTITRDMSTSTAYMELSSLGSEDTAVYYCAAPNCSGGSCYDGFDLWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | EIVLTQSPGTLSLSPGERATLSCRGSQSVRSSYLGWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWTFGQGTKVEIKGTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSSAVQWVRQARGQRLEWIGWIVVGSGNTDYAQQFQERVTITRDMSTSTAYMELSSLGSEDTAVYYCAAPNCSGGSCYDGFDLWGQGTMVTVSS | EIVLTQSPGTLSLSPGERATLSCRGSQSVRSSYLGWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWTFGQGTKVEIK | 14.438988 | 13.376718 | 221 | 215 | 123 | 108 | 123 | 108 | 40 | variable heavy chain p5c3 (vh) | variable light chain p5c3 (vl) | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 53 | 24 | 0.77 | HL | train |
7p40_C_D | 7p40 | p5c3 is a potent fab neutralizer | no | viral protein | 2021-07-09 | 2021-10-13 | electron microscopy | 3.5 | N.A. | N.A. | 34599871 | 10.1016/j.celrep.2021.109814 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | C | D | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSSAVQWVRQARGQRLEWIGWIVVGSGNTDYAQQFQERVTITRDMSTSTAYMELSSLGSEDTAVYYCAAPNCSGGSCYDGFDLWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | EIVLTQSPGTLSLSPGERATLSCRGSQSVRSSYLGWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWTFGQGTKVEIKGTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSSAVQWVRQARGQRLEWIGWIVVGSGNTDYAQQFQERVTITRDMSTSTAYMELSSLGSEDTAVYYCAAPNCSGGSCYDGFDLWGQGTMVTVSS | EIVLTQSPGTLSLSPGERATLSCRGSQSVRSSYLGWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWTFGQGTKVEIK | 14.438993 | 13.371829 | 221 | 215 | 123 | 108 | 123 | 108 | 33 | variable heavy chain p5c3 (vh) | variable light chain p5c3 (vl) | homo sapiens | homo sapiens | E | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 50 | 21 | 0.75 | HL | train |
7p40_I_H | 7p40 | p5c3 is a potent fab neutralizer | no | viral protein | 2021-07-09 | 2021-10-13 | electron microscopy | 3.5 | N.A. | N.A. | 34599871 | 10.1016/j.celrep.2021.109814 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | I | H | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSSAVQWVRQARGQRLEWIGWIVVGSGNTDYAQQFQERVTITRDMSTSTAYMELSSLGSEDTAVYYCAAPNCSGGSCYDGFDLWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | EIVLTQSPGTLSLSPGERATLSCRGSQSVRSSYLGWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWTFGQGTKVEIKGTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSSAVQWVRQARGQRLEWIGWIVVGSGNTDYAQQFQERVTITRDMSTSTAYMELSSLGSEDTAVYYCAAPNCSGGSCYDGFDLWGQGTMVTVSS | EIVLTQSPGTLSLSPGERATLSCRGSQSVRSSYLGWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWTFGQGTKVEIK | 14.438993 | 13.385273 | 221 | 215 | 123 | 108 | 123 | 108 | 39 | variable heavy chain p5c3 (vh) | variable light chain p5c3 (vl) | homo sapiens | homo sapiens | G | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 46 | 21 | 0.81 | HL | train |
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