PDB_ID_chain
stringlengths
6
10
PDB_ID
stringlengths
4
4
Title
stringlengths
4
230
Mutation(s)
stringclasses
2 values
Classification
stringclasses
305 values
Deposit_date
stringdate
1976-03-17 00:00:00
2026-01-20 00:00:00
Release_date
stringdate
1976-05-19 00:00:00
2026-02-25 00:00:00
Method
stringclasses
5 values
Resolution
stringclasses
459 values
R_free
stringclasses
227 values
R_work
stringclasses
211 values
PMID
stringlengths
4
8
DOI
stringlengths
4
68
Model_index
int64
0
76
Asym_ID_type
stringclasses
2 values
Ab_type
stringclasses
30 values
H_subgroup
stringclasses
8 values
L_subgroup
stringclasses
19 values
H_chain_ID
stringclasses
60 values
L_chain_ID
stringclasses
58 values
H_fas_seq
stringlengths
4
919
L_fas_seq
stringlengths
4
627
H_filled_pdb_seq
stringlengths
4
896
L_filled_pdb_seq
stringlengths
4
523
H_mean_radius
float64
0
79.7
L_mean_radius
float64
0
84.3
H_fas_seq_len
int64
0
919
L_fas_seq_len
int64
0
627
H_pdb_seq_len
int64
0
879
L_pdb_seq_len
int64
0
523
H_filled_seq_len
int64
0
896
L_filled_seq_len
int64
0
523
HL_inf_res_num
int64
0
175
H_mol_name
stringlengths
2
331
L_mol_name
stringlengths
2
151
H_species
stringclasses
68 values
L_species
stringclasses
42 values
Ag_chain_ID(s)
stringclasses
279 values
Ag_type(s)
stringclasses
16 values
Ag_mol_name(s)
stringlengths
2
390
Ag_species
stringclasses
743 values
Ab_ag_inf_res_num
stringlengths
1
11
CDR_inf_res_num
stringclasses
444 values
CDR_inf_res_ratio
stringlengths
1
19
hl_label
stringclasses
3 values
split
stringclasses
1 value
7qxe_A_B
7qxe
recognition of staphylococcus aureus wall teichoic acid analogue tb87 (compound 3) by fab4497
no
carbohydrate
2022-01-26
2022-08-31
x-ray diffraction
1.84
0.218
0.188
36313161
10.1021/acscentsci.2c00125
0
label_asym_id
FabH:FabL
IGHV3
IGKV4
A
B
EVQLVESGGGLVQPGGSLRLSCSASGFSFNSFWMHWVRQVPGKGLVWISFTNNEGTTTAYADSVRGRFIISRDNAKNTLYLEMNNLRGEDTAVYYCARGDGGLDDWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGGGGSLPETGGHHHHHH
DIQLTQSPDSLAVSLGERATINCKSSQSIFRTSRNKNLLNWYQQRPGQPPRLLIHWASTRKSGVPDRFSGSGFGTDFTLTITSLQAEDVAIYYCQQYFSPPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCSASGFSFNSFWMHWVRQVPGKGLVWISFTNNEGTTTAYADSVRGRFIISRDNAKNTLYLEMNNLRGEDTAVYYCARGDGGLDDWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQLTQSPDSLAVSLGERATINCKSSQSIFRTSRNKNLLNWYQQRPGQPPRLLIHWASTRKSGVPDRFSGSGFGTDFTLTITSLQAEDVAIYYCQQYFSPPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
20.761314
23.805027
236
220
215
219
217
219
100
antibody fab 4497 heavy chain
antibody 4497 light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7qxe_C_D
7qxe
recognition of staphylococcus aureus wall teichoic acid analogue tb87 (compound 3) by fab4497
no
carbohydrate
2022-01-26
2022-08-31
x-ray diffraction
1.84
0.218
0.188
36313161
10.1021/acscentsci.2c00125
0
label_asym_id
FabH:FabL
IGHV3
IGKV4
C
D
EVQLVESGGGLVQPGGSLRLSCSASGFSFNSFWMHWVRQVPGKGLVWISFTNNEGTTTAYADSVRGRFIISRDNAKNTLYLEMNNLRGEDTAVYYCARGDGGLDDWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGGGGSLPETGGHHHHHH
DIQLTQSPDSLAVSLGERATINCKSSQSIFRTSRNKNLLNWYQQRPGQPPRLLIHWASTRKSGVPDRFSGSGFGTDFTLTITSLQAEDVAIYYCQQYFSPPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCSASGFSFNSFWMHWVRQVPGKGLVWISFTNNEGTTTAYADSVRGRFIISRDNAKNTLYLEMNNLRGEDTAVYYCARGDGGLDDWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
DIQLTQSPDSLAVSLGERATINCKSSQSIFRTSRNKNLLNWYQQRPGQPPRLLIHWASTRKSGVPDRFSGSGFGTDFTLTITSLQAEDVAIYYCQQYFSPPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
20.85077
23.785446
236
220
215
219
219
219
99
antibody fab 4497 heavy chain
antibody 4497 light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7wqv_B
7wqv
crystal structure of a neutralizing monoclonal antibody (ab08) in complex with sars-cov-2 receptor-binding domain (rbd)
no
viral protein
2022-01-26
2023-01-25
x-ray diffraction
2.8
0.251
0.22
36706160
10.1371/journal.ppat.1011085
0
auth_asym_id
scFv
N.A.
N.A.
B
N.A.
MSKYLLPTAAAGLLLLAAQPAMAGSSSQVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGGIIPILGTTNYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARKFGYSGYGATWYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSQSVLTQPPSVSGAPGQRVTISCTGNSSNIGAGYDVHWYQQFPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLAGRAGEQKLISEEDLNSAVDHHHHHH
N.A.
VQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGGIIPILGTTNYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARKFGYSGYGATWYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSQSVLTQPPSVSGAPGQRVTISCTGNSSNIGAGYDVHWYQQFPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVL
N.A.
17.532612
0
303
0
237
0
249
0
0
ab08
N.A.
homo sapiens
N.A.
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
69
27
0.79
H_only
train
7wqv_D
7wqv
crystal structure of a neutralizing monoclonal antibody (ab08) in complex with sars-cov-2 receptor-binding domain (rbd)
no
viral protein
2022-01-26
2023-01-25
x-ray diffraction
2.8
0.251
0.22
36706160
10.1371/journal.ppat.1011085
0
auth_asym_id
scFv
N.A.
N.A.
D
N.A.
MSKYLLPTAAAGLLLLAAQPAMAGSSSQVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGGIIPILGTTNYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARKFGYSGYGATWYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSQSVLTQPPSVSGAPGQRVTISCTGNSSNIGAGYDVHWYQQFPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLAGRAGEQKLISEEDLNSAVDHHHHHH
N.A.
VQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGGIIPILGTTNYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARKFGYSGYGATWYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSQSVLTQPPSVSGAPGQRVTISCTGNSSNIGAGYDVHWYQQFPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLA
N.A.
17.53824
0
303
0
235
0
250
0
0
ab08
N.A.
homo sapiens
N.A.
C
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
65
26
0.84
H_only
train
7wqv_F
7wqv
crystal structure of a neutralizing monoclonal antibody (ab08) in complex with sars-cov-2 receptor-binding domain (rbd)
no
viral protein
2022-01-26
2023-01-25
x-ray diffraction
2.8
0.251
0.22
36706160
10.1371/journal.ppat.1011085
0
auth_asym_id
scFv
N.A.
N.A.
F
N.A.
MSKYLLPTAAAGLLLLAAQPAMAGSSSQVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGGIIPILGTTNYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARKFGYSGYGATWYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSQSVLTQPPSVSGAPGQRVTISCTGNSSNIGAGYDVHWYQQFPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLAGRAGEQKLISEEDLNSAVDHHHHHH
N.A.
QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGGIIPILGTTNYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARKFGYSGYGATWYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSQSVLTQPPSVSGAPGQRVTISCTGNSSNIGAGYDVHWYQQFPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLA
N.A.
17.58311
0
303
0
236
0
251
0
0
ab08
N.A.
homo sapiens
N.A.
E
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
66
26
0.81
H_only
train
7wqv_H
7wqv
crystal structure of a neutralizing monoclonal antibody (ab08) in complex with sars-cov-2 receptor-binding domain (rbd)
no
viral protein
2022-01-26
2023-01-25
x-ray diffraction
2.8
0.251
0.22
36706160
10.1371/journal.ppat.1011085
0
auth_asym_id
scFv
N.A.
N.A.
H
N.A.
MSKYLLPTAAAGLLLLAAQPAMAGSSSQVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGGIIPILGTTNYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARKFGYSGYGATWYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSQSVLTQPPSVSGAPGQRVTISCTGNSSNIGAGYDVHWYQQFPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLAGRAGEQKLISEEDLNSAVDHHHHHH
N.A.
VQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGGIIPILGTTNYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARKFGYSGYGATWYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSQSVLTQPPSVSGAPGQRVTISCTGNSSNIGAGYDVHWYQQFPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLAGR
N.A.
17.71348
0
303
0
240
0
252
0
0
ab08
N.A.
homo sapiens
N.A.
G
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
67
27
0.82
H_only
train
7wqv_J
7wqv
crystal structure of a neutralizing monoclonal antibody (ab08) in complex with sars-cov-2 receptor-binding domain (rbd)
no
viral protein
2022-01-26
2023-01-25
x-ray diffraction
2.8
0.251
0.22
36706160
10.1371/journal.ppat.1011085
0
auth_asym_id
scFv
N.A.
N.A.
J
N.A.
MSKYLLPTAAAGLLLLAAQPAMAGSSSQVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGGIIPILGTTNYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARKFGYSGYGATWYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSQSVLTQPPSVSGAPGQRVTISCTGNSSNIGAGYDVHWYQQFPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLAGRAGEQKLISEEDLNSAVDHHHHHH
N.A.
QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGGIIPILGTTNYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARKFGYSGYGATWYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSQSVLTQPPSVSGAPGQRVTISCTGNSSNIGAGYDVHWYQQFPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVL
N.A.
17.52712
0
303
0
238
0
250
0
0
ab08
N.A.
homo sapiens
N.A.
I
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
67
26
0.81
H_only
train
7wqv_L
7wqv
crystal structure of a neutralizing monoclonal antibody (ab08) in complex with sars-cov-2 receptor-binding domain (rbd)
no
viral protein
2022-01-26
2023-01-25
x-ray diffraction
2.8
0.251
0.22
36706160
10.1371/journal.ppat.1011085
0
auth_asym_id
scFv
N.A.
N.A.
L
N.A.
MSKYLLPTAAAGLLLLAAQPAMAGSSSQVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGGIIPILGTTNYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARKFGYSGYGATWYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSQSVLTQPPSVSGAPGQRVTISCTGNSSNIGAGYDVHWYQQFPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLAGRAGEQKLISEEDLNSAVDHHHHHH
N.A.
QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGGIIPILGTTNYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARKFGYSGYGATWYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSQSVLTQPPSVSGAPGQRVTISCTGNSSNIGAGYDVHWYQQFPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLAG
N.A.
17.592157
0
303
0
238
0
252
0
0
ab08
N.A.
homo sapiens
N.A.
K
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
68
28
0.78
H_only
train
7wqv_N
7wqv
crystal structure of a neutralizing monoclonal antibody (ab08) in complex with sars-cov-2 receptor-binding domain (rbd)
no
viral protein
2022-01-26
2023-01-25
x-ray diffraction
2.8
0.251
0.22
36706160
10.1371/journal.ppat.1011085
0
auth_asym_id
scFv
N.A.
N.A.
N
N.A.
MSKYLLPTAAAGLLLLAAQPAMAGSSSQVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGGIIPILGTTNYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARKFGYSGYGATWYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSQSVLTQPPSVSGAPGQRVTISCTGNSSNIGAGYDVHWYQQFPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLAGRAGEQKLISEEDLNSAVDHHHHHH
N.A.
VQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGGIIPILGTTNYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARKFGYSGYGATWYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSQSVLTQPPSVSGAPGQRVTISCTGNSSNIGAGYDVHWYQQFPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLA
N.A.
17.501694
0
303
0
234
0
250
0
0
ab08
N.A.
homo sapiens
N.A.
M
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
68
27
0.79
H_only
train
7wqv_P
7wqv
crystal structure of a neutralizing monoclonal antibody (ab08) in complex with sars-cov-2 receptor-binding domain (rbd)
no
viral protein
2022-01-26
2023-01-25
x-ray diffraction
2.8
0.251
0.22
36706160
10.1371/journal.ppat.1011085
0
auth_asym_id
scFv
N.A.
N.A.
P
N.A.
MSKYLLPTAAAGLLLLAAQPAMAGSSSQVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGGIIPILGTTNYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARKFGYSGYGATWYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSQSVLTQPPSVSGAPGQRVTISCTGNSSNIGAGYDVHWYQQFPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLAGRAGEQKLISEEDLNSAVDHHHHHH
N.A.
QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYTISWVRQAPGQGLEWMGGIIPILGTTNYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARKFGYSGYGATWYFDLWGRGTLVTVSSGGGGSGGGGSGGGGSQSVLTQPPSVSGAPGQRVTISCTGNSSNIGAGYDVHWYQQFPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLA
N.A.
17.461325
0
303
0
235
0
251
0
0
ab08
N.A.
homo sapiens
N.A.
O
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
65
25
0.76
H_only
train
7wr9_A_B
7wr9
local cryoem structure of the sars-cov s2p in complex with bd55-3152 fab
no
viral protein
2022-01-26
2023-02-01
electron microscopy
3.24
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV1
IGLV3
A
B
MGWSLILLFLVAVATRVLSQVQLVQSGAEVKKPGASVIVSCKASGYRFISHYIHWVRQAPGQGLEWMGKIDPSGRGTTYAQKLQGRVSVTRDTSTSSVYMALSGLRSDDTAVYYCARDRFPLSDPYVWGSPLGGLDVWGQGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHHHHHH
MGWSCIILFLVATATGVHSSYDLTQPPSVSVSPGQTARITCSGDALPSQYVYWYQQRPGQAPVLVMYKDSERPPGIPERFSGSTSGTTATLTITGVQAEDEADYYCQSADASTTYHVFGGGTKVTVVGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVQSGAEVKKPGASVIVSCKASGYRFISHYIHWVRQAPGQGLEWMGKIDPSGRGTTYAQKLQGRVSVTRDTSTSSVYMALSGLRSDDTAVYYCARDRFPLSDPYVWGSPLGGLDVWGQGTTVIV
DLTQPPSVSVSPGQTARITCSGDALPSQYVYWYQQRPGQAPVLVMYKDSERPPGIPERFSGSTSGTTATLTITGVQAEDEADYYCQSADASTTYHVFGGGTKVT
14.41347
12.991104
260
233
127
104
127
104
49
bd55-3152h
bd55-3152l
homo sapiens
homo sapiens
F
protein
spike protein s1
severe acute respiratory syndrome coronavirus
40
19
0.95
HL
train
7tqg_H_L
7tqg
crystal structure of ioma fab inferred germline
no
antiviral protein, immune system
2022-01-26
2023-03-01
x-ray diffraction
2.07
0.257
0.224
36763635
10.1126/sciimmunol.ade6364
0
auth_asym_id
FabH:FabL
IGHV1
IGLV2
H
L
QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAREMFDSSADWSPWRGMVAWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
QSALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSVAFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP
QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCAREMFDSSADWSPWRGMVAWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
ALTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWYQQHPGKAPKLMIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGSVAFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP
20.864061
23.92663
226
210
226
208
226
208
89
ioma igl fab heavy chain
ioma igl fab light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7wrv_U_V
7wrv
the interface of jmb2002 fab binds to sars-cov-2 omicron variant s
yes
viral protein
2022-01-27
2022-03-23
electron microscopy
2.47
N.A.
N.A.
35133176
10.1126/science.abn8863
0
auth_asym_id
VH:VL
IGHV1
IGKV1
U
V
QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGRIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCASLASYSSGWEDVFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTHHHHHH
GDIQMTQSPSSLSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGRIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCASLASYSSGWEDVFDIWGQGTMVTVS
DIQMTQSPSSLSASVGDRVTITCRASQGISSWLAWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPLTFGGGTKVEI
13.983619
13.023939
237
215
122
106
122
106
39
jmb2002 fab heavy chain
jmb2002 fab light chain
mus musculus
mus musculus
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
53
21
0.81
HL
train
7wrl_A_B
7wrl
local structure of bd55-1239 fab and sars-cov2 omicron rbd complex
yes
viral protein
2022-01-27
2022-06-22
electron microscopy
3.51
N.A.
N.A.
35714668
10.1038/s41586-022-04980-y
0
auth_asym_id
VH:VL
IGHV1
IGLV2
A
B
QVQLVQSGAEVKKPGSSVKVSCKASGDIYSTYASSWVRQAPGQGLEWMGRIIPVSGTVNYADNFQGRVTITADKSTSTAYMELRSLTSEDTAVYYCARDVARGGYSGTDFFDYYYGMDVWGQGTTVT
SALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPDKAPKLLIYDVNNRPSGVSTRFSGSKSGNTASLTISRLQTDDEADYSCSSYTSSNTWVFGGGTK
QVQLVQSGAEVKKPGSSVKVSCKASGDIYSTYASSWVRQAPGQGLEWMGRIIPVSGTVNYADNFQGRVTITADKSTSTAYMELRSLTSEDTAVYYCARDVARGGYSGTDFFDYYYGMDVWGQGTTVT
SALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPDKAPKLLIYDVNNRPSGVSTRFSGSKSGNTASLTISRLQTDDEADYSCSSYTSSNTWVFGGGTK
14.164608
13.223252
127
105
127
105
127
105
50
bd55-1239h
bd55-1239l
sars coronavirus b012
sars coronavirus b012
R
protein
spike protein s1
sars coronavirus b012
43
19
0.95
HL
train
7wry_H_L
7wry
local structure of bd55-3546 fab and sars-cov2 delta rbd complex
no
viral protein
2022-01-27
2022-09-28
electron microscopy
3.28
N.A.
N.A.
36493787
10.1016/j.celrep.2022.111845
0
auth_asym_id
VH:VL
IGHV7
IGKV3
H
L
QVQLVQSGSALKRPGASVKLSCKASGYTFINYAIHWVRQAPGQGLQWMGWINPNTGIPTYAQGFTGRFVFSLDTSVSTAYLQLSSLKIEDTAVYYCARDQDLYERAFDIWGQGTMVTVS
DVVLTQSPATLSVSPGERATLSCRASHNVGTSLAWYQQKPGQAPRLLIHGVSTRATGVPARFSDSGSGTEFTLTISSLQSEDLAVYYCQQYNYWPLTFGGGTKVEI
QVQLVQSGSALKRPGASVKLSCKASGYTFINYAIHWVRQAPGQGLQWMGWINPNTGIPTYAQGFTGRFVFSLDTSVSTAYLQLSSLKIEDTAVYYCARDQDLYERAFDIWGQGTMVTVS
DVVLTQSPATLSVSPGERATLSCRASHNVGTSLAWYQQKPGQAPRLLIHGVSTRATGVPARFSDSGSGTEFTLTISSLQSEDLAVYYCQQYNYWPLTFGGGTKVEI
13.804602
12.977742
119
106
119
106
119
106
45
bd55-3546h
bd55-3546l
sars coronavirus b012
sars coronavirus b012
R
protein
spike protein s1
sars coronavirus b012
37
17
0.94
HL
train
7tr4_L_H
7tr4
ma2-mart1-hlaa0201
yes
immune system
2022-01-27
2022-11-23
x-ray diffraction
2.3
0.267
0.223
36593402
10.1038/s41587-022-01567-w
0
auth_asym_id
FabH:FabL
IGHV3
IGLV2
L
H
EVQLLESGGGLVQPGGSLRLSCAASGFTFSTYQMSWVRQAPGKGLEWVSGIVSSGGSTAYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAGELLPGYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
QSELTQPRSVSGSPGQSVTISCTGTDRDVGGQNYVSWYQQHPGKAPKLIIHDVIERSSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCWSPAWPYAVFGTGTDVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC
EVQLLESGGGLVQPGGSLRLSCAASGFTFSTYQMSWVRQAPGKGLEWVSGIVSSGGSTAYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAGELLPGYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
QSELTQPRSVSGSPGQSVTISCTGTDRDVGGQNYVSWYQQHPGKAPKLIIHDVIERSSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCWSPAWPYAVFGTGTDVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP
23.21462
22.564384
220
214
214
211
220
211
89
heavy chain
light chain
homo sapiens
homo sapiens
A;P
protein;peptide
hla-a*02:01;melanoma antigen recognized by t-cells 1
homo sapiens;homo sapiens
28;17
12;10
0.86;1.0
HL
train
7ws0_E_D
7ws0
structures of omicron spike complexes illuminate broad-spectrum neutralizing antibody development
yes
viral protein/immune system
2022-01-28
2022-06-01
electron microscopy
3.2
N.A.
N.A.
35477022
10.1016/j.celrep.2022.110770
0
auth_asym_id
VH:VL
IGHV3
IGKV1
E
D
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSSAS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSSAS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
14.157116
13.435723
125
108
125
108
125
108
39
510a5 heavy chain
510a5 light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
32
15
0.94
HL
train
7ws0_G_F
7ws0
structures of omicron spike complexes illuminate broad-spectrum neutralizing antibody development
yes
viral protein/immune system
2022-01-28
2022-06-01
electron microscopy
3.2
N.A.
N.A.
35477022
10.1016/j.celrep.2022.110770
0
auth_asym_id
VH:VL
IGHV3
IGKV1
G
F
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSSAS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSSAS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
14.157282
13.462297
125
108
125
108
125
108
39
510a5 heavy chain
510a5 light chain
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
34
16
0.89
HL
train
7ws0_I_H
7ws0
structures of omicron spike complexes illuminate broad-spectrum neutralizing antibody development
yes
viral protein/immune system
2022-01-28
2022-06-01
electron microscopy
3.2
N.A.
N.A.
35477022
10.1016/j.celrep.2022.110770
0
auth_asym_id
VH:VL
IGHV3
IGKV1
I
H
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSSAS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSSAS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
14.157316
13.438699
125
108
125
108
125
108
39
510a5 heavy chain
510a5 light chain
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
33
15
0.88
HL
train
7ws1_E_D
7ws1
structures of omicron spike complexes illuminate broad-spectrum neutralizing antibody development
yes
viral protein/immune system
2022-01-28
2022-06-01
electron microscopy
3.4
N.A.
N.A.
35477022
10.1016/j.celrep.2022.110770
0
auth_asym_id
VH:VL
IGHV3
IGKV1
E
D
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSSAS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSSAS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
14.174747
13.504823
125
108
125
108
125
108
38
510a5 heavy chain
510a5 light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
33
15
0.88
HL
train
7ws1_G_F
7ws1
structures of omicron spike complexes illuminate broad-spectrum neutralizing antibody development
yes
viral protein/immune system
2022-01-28
2022-06-01
electron microscopy
3.4
N.A.
N.A.
35477022
10.1016/j.celrep.2022.110770
0
auth_asym_id
VH:VL
IGHV3
IGKV1
G
F
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSSAS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSSAS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
14.174742
13.495502
125
108
125
108
125
108
38
510a5 heavy chain
510a5 light chain
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
33
15
0.88
HL
train
7ws1_I_H
7ws1
structures of omicron spike complexes illuminate broad-spectrum neutralizing antibody development
yes
viral protein/immune system
2022-01-28
2022-06-01
electron microscopy
3.4
N.A.
N.A.
35477022
10.1016/j.celrep.2022.110770
0
auth_asym_id
VH:VL
IGHV3
IGKV1
I
H
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSSAS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSSAS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
14.174747
13.489571
125
108
125
108
125
108
38
510a5 heavy chain
510a5 light chain
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
33
15
0.83
HL
train
7ws1_K_J
7ws1
structures of omicron spike complexes illuminate broad-spectrum neutralizing antibody development
yes
viral protein/immune system
2022-01-28
2022-06-01
electron microscopy
3.4
N.A.
N.A.
35477022
10.1016/j.celrep.2022.110770
0
auth_asym_id
VH:VL
IGHV3
IGKV1
K
J
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSSAS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSSAS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
14.167525
13.522566
125
108
125
108
125
108
39
510a5 heavy chain
510a5 light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7ws2_E_D
7ws2
structures of omicron spike complexes illuminate broad-spectrum neutralizing antibody development
no
viral protein/immune system
2022-01-28
2022-06-01
electron microscopy
3.3
N.A.
N.A.
35477022
10.1016/j.celrep.2022.110770
0
auth_asym_id
VH:VL
IGHV3
IGKV1
E
D
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
13.944649
13.439915
123
108
123
108
123
108
39
510a5 heavy chain
510a5 light chain
homo sapiens
homo sapiens
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
32
15
0.94
HL
train
7ws3_E_D
7ws3
structures of omicron spike complexes illuminate broad-spectrum neutralizing antibody development
yes
viral protein/immune system
2022-01-28
2022-06-01
electron microscopy
3.6
N.A.
N.A.
35477022
10.1016/j.celrep.2022.110770
0
auth_asym_id
VH:VL
IGHV3
IGKV1
E
D
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
13.950311
13.436584
123
108
123
108
123
108
41
510a5 heavy chain
510a5 light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
34
16
0.89
HL
train
7ws3_G_F
7ws3
structures of omicron spike complexes illuminate broad-spectrum neutralizing antibody development
yes
viral protein/immune system
2022-01-28
2022-06-01
electron microscopy
3.6
N.A.
N.A.
35477022
10.1016/j.celrep.2022.110770
0
auth_asym_id
VH:VL
IGHV3
IGKV1
G
F
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
13.943915
13.462274
123
108
123
108
123
108
41
510a5 heavy chain
510a5 light chain
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
32
14
0.88
HL
train
7ws3_I_H
7ws3
structures of omicron spike complexes illuminate broad-spectrum neutralizing antibody development
yes
viral protein/immune system
2022-01-28
2022-06-01
electron microscopy
3.6
N.A.
N.A.
35477022
10.1016/j.celrep.2022.110770
0
auth_asym_id
VH:VL
IGHV3
IGKV1
I
H
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
13.943895
13.438688
123
108
123
108
123
108
38
510a5 heavy chain
510a5 light chain
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
30
14
0.93
HL
train
7ws7_G_F
7ws7
structures of omicron spike complexes illuminate broad-spectrum neutralizing antibody development
no
viral protein/immune system
2022-01-28
2022-06-01
electron microscopy
3.4
N.A.
N.A.
35477022
10.1016/j.celrep.2022.110770
0
auth_asym_id
VH:VL
IGHV3
IGKV1
G
F
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSSAS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSSAS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
14.158731
13.460192
125
108
125
108
125
108
39
510a5 heavy chain
510a5 light chain
homo sapiens
homo sapiens
B
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
31
15
0.94
HL
train
7ws7_K_J
7ws7
structures of omicron spike complexes illuminate broad-spectrum neutralizing antibody development
no
viral protein/immune system
2022-01-28
2022-06-01
electron microscopy
3.4
N.A.
N.A.
35477022
10.1016/j.celrep.2022.110770
0
auth_asym_id
VH:VL
IGHV3
IGKV1
K
J
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSSAS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGISWNSDSIDYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRGYEILTPASFDYWGQGTLVTVSSAS
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWFQHKPGKAPKLLIYGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPYTFGQGTKLEIK
14.14657
13.502619
125
108
125
108
125
108
37
510a5 heavy chain
510a5 light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7wrz_H_L
7wrz
local resolution of bd55-5840 fab and sars-cov2 omicron rbd
yes
viral protein
2022-01-28
2022-06-22
electron microscopy
3.26
N.A.
N.A.
35714668
10.1038/s41586-022-04980-y
0
auth_asym_id
VH:VL
IGHV7
IGKV3
H
L
VQLAQSGSELRKPGASVKVSCDTSGHSFTSNAIHWVRQAPGQGLEWMGWINTDTGTPTYAQGFTGRFVFSLDTSARTAYLQISSLKADDTAVFYCARERDYSDYFFDYWGQGTLVTVSS
EVVMTQSPASLSVSPGERATLSCRARASLGISTDLAWYQQRPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDSAVYYCQQYSNWPLTFGGGTKVEIK
VQLAQSGSELRKPGASVKVSCDTSGHSFTSNAIHWVRQAPGQGLEWMGWINTDTGTPTYAQGFTGRFVFSLDTSARTAYLQISSLKADDTAVFYCARERDYSDYFFDYWGQGTLVTVSS
EVVMTQSPASLSVSPGERATLSCRARASLGISTDLAWYQQRPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDSAVYYCQQYSNWPLTFGGGTKVEIK
13.722942
13.206987
119
109
119
109
119
109
45
bd55-5840h
bd55-5840l
sars coronavirus b012
sars coronavirus b012
R
protein
spike protein s1
sars coronavirus b012
47
23
0.85
HL
train
7tri_Z_Y
7tri
human antibody s8v1-172 in complex with the influenza hemagglutinin head domain of a/sydney/05/1997(h3n2)
no
immune system/viral protein
2022-01-28
2023-08-02
x-ray diffraction
3.6
0.268
0.233
38127922
10.1371/journal.pbio.3002415
0
auth_asym_id
FabH:FabL
IGHV4
IGKV3
Z
Y
EVQLQESGPGLVKPSETLSLTCTVSGGSISNYHWTWIRQPPGKGLEWIGDMYNSGSTKYNPSLKSRVTISVDRSKNQLSLKLSSVTVADTAVYYCARDDIVIGEGWYHGMDLWGQGTTVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH
EIVLTQSPATLSLSPGERATLSCRASQSVSTDLAWYQQKPGQAPRLLIYDAISRASGIPDRFSGSGSGTDFTLTISSLEPEDFAVYYCQHRSTWVTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLQESGPGLVKPSETLSLTCTVSGGSISNYHWTWIRQPPGKGLEWIGDMYNSGSTKYNPSLKSRVTISVDRSKNQLSLKLSSVTVADTAVYYCARDDIVIGEGWYHGMDLWGQGTTVTVSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
EIVLTQSPATLSLSPGERATLSCRASQSVSTDLAWYQQKPGQAPRLLIYDAISRASGIPDRFSGSGSGTDFTLTISSLEPEDFAVYYCQHRSTWVTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
21.618366
23.153677
234
213
224
211
224
211
101
s8v1-172 fab heavy chain
s8v1-172 fab kappa light chain
homo sapiens
homo sapiens
B
protein
hemagglutinin
influenza a virus (a/sydney/5/1997(h3n2))
44
18
0.82
HL
train
7wsi_H_L
7wsi
cryo-em structure of human ntcp (wild-type) complexed with yn69202fab
no
transport protein
2022-01-29
2022-05-25
electron microscopy
3.32
N.A.
N.A.
35580629
10.1038/s41586-022-04845-4
0
auth_asym_id
FabH:FabL
IGHV1
IGKV4
H
L
EVQLQQSGPELVKPGASVKMSCKASGYTFTSYIIHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKGTLTSDKSSSTAYMELSSLTSEDSAVYYCARSYYDGIPHYFDYWGQGTTLTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPSGPISTINPCPPCKECHKCPAPNLEGGPS
DIVMTQSPSSLAVSAGEKVTMSCKSSQSLFNSRTRRNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYLLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVQLQQSGPELVKPGASVKMSCKASGYTFTSYIIHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKGTLTSDKSSSTAYMELSSLTSEDSAVYYCARSYYDGIPHYFDYWGQGTTLTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPS
DIVMTQSPSSLAVSAGEKVTMSCKSSQSLFNSRTRRNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYLLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR
23.674551
23.76247
249
219
221
216
221
216
101
fab heavy chain from antibody igg clone number yn69202
fab light chain from antibody igg clone number yn69202
mus musculus
mus musculus
A
protein
sodium/bile acid cotransporter
homo sapiens
56
24
0.89
HL
train
7wsl_H_L
7wsl
pd-1 in complex with dostarlimab
no
immune system
2022-01-30
2022-08-24
x-ray diffraction
1.53
0.178
0.161
35168061
10.1016/j.bbrc.2022.02.026
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYDMSWVRQAPGKGLEWVSTISGGGSYTYYQDSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCASPYYAMDYWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHHHHHH
DIQLTQSPSFLSAYVGDRVTITCKASQDVGTAVAWYQQKPGKAPKLLIYWASTLHTGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQHYSSYPWTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYDMSWVRQAPGKGLEWVSTISGGGSYTYYQDSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCASPYYAMDYWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIQLTQSPSFLSAYVGDRVTITCKASQDVGTAVAWYQQKPGKAPKLLIYWASTLHTGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQHYSSYPWTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
22.30812
22.419683
228
214
209
212
216
212
94
heavy chain
light chain
homo sapiens
homo sapiens
D
protein
programmed cell death protein 1
homo sapiens
47
20
0.77
HL
train
7trs_H
7trs
human m4 muscarinic acetylcholine receptor complex with gi1 and the endogenous agonist acetylcholine
yes
signaling protein/immune system
2022-01-30
2023-05-17
electron microscopy
2.8
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
scFv
N.A.
N.A.
H
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK
N.A.
17.429127
0
248
0
234
0
248
0
0
antibody fragment scfv16
N.A.
mus musculus
N.A.
B;A
protein;protein
guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1
homo sapiens;homo sapiens
25;31
11;18
0.79;0.95
H_only
train
7r0c_D
7r0c
structure of the avp-v2r-arrestin2-scfv30 complex
no
membrane protein
2022-02-01
2022-09-14
electron microscopy
4.73
N.A.
N.A.
36054364
10.1126/sciadv.abo7761
0
auth_asym_id
scFv
N.A.
N.A.
D
N.A.
AMGDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYKYVPVTFGCGTKVEIKGTTAASGSSGGSSSGAEVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKCLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRQFWYSGLDYWGQGTLVTVSSAAADDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK
N.A.
GDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYKYVPVTFGCGTKVEIKGTTAASGSSGGSSSGAEVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKCLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRQFWYSGLDYWGQGTLVTVSSAA
N.A.
17.576708
0
284
0
229
0
246
0
0
scfv30
N.A.
synthetic construct
N.A.
C
protein
arrestin2
homo sapiens
56
23
0.82
H_only
train
7ttx_H_L
7ttx
crystal structure of potent neutralizing antibody 10-40 in complex with sarbecovirus bat ratg13 receptor-binding domain
no
viral protein/immune system
2022-02-02
2022-04-27
x-ray diffraction
2.8
0.321
0.222
35438546
10.1126/scitranslmed.abn6859
0
auth_asym_id
FabH:FabL
IGHV4
IGLV6
H
L
QLQLQESGPGLVKPSETLSLTCTVSGGSISSSNFYWGWIRQPPGKGLEWIASITYSGRTFYNPSLKSRVAISVDTSKNQFSLKLSSVTAADTAVYYCARTFPSYYDRSGYHYLNYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
NFMLTQPHSMSESPGKTVTISCTRSSGSIASNYVQWYQQRPGSSPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSSWVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QLQLQESGPGLVKPSETLSLTCTVSGGSISSSNFYWGWIRQPPGKGLEWIASITYSGRTFYNPSLKSRVAISVDTSKNQFSLKLSSVTAADTAVYYCARTFPSYYDRSGYHYLNYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
NFMLTQPHSMSESPGKTVTISCTRSSGSIASNYVQWYQQRPGSSPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSSWVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
21.539192
23.63902
237
216
227
213
233
213
97
1040 heavy chain
1040 light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein
bat coronavirus ratg13
57
25
0.89
HL
train
7tuf_A_B
7tuf
crystal structure of tapasin in complex with pasta1-fab
no
immune system
2022-02-02
2022-09-07
x-ray diffraction
2.8
0.274
0.231
36115831
10.1038/s41467-022-33153-8
0
auth_asym_id
FabH:FabL
IGHV4
IGKV3
A
B
DVQLQESGPGLVIPSQSLSLTCTVTGYSITTDYAWNWIRQFPGNRLEWMGYISSSGVTVYNPSLKSRISITRDTSKNQFFLQLISVTTEDTATYYCARRGYYRYDSIDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGCKGSHHHHHH
QIVLSQSPAILSASPGEKVTMTCRATSSVSYIHWYQQKPGSSPKPWIYATSSLTSGVPVRFSGSGSGTSYSLTISRVEAEDAATYYCQQWSSNPPTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
DVQLQESGPGLVIPSQSLSLTCTVTGYSITTDYAWNWIRQFPGNRLEWMGYISSSGVTVYNPSLKSRISITRDTSKNQFFLQLISVTTEDTATYYCARRGYYRYDSIDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRD
QIVLSQSPAILSASPGEKVTMTCRATSSVSYIHWYQQKPGSSPKPWIYATSSLTSGVPVRFSGSGSGTSYSLTISRVEAEDAATYYCQQWSSNPPTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR
21.666294
23.169344
233
213
221
210
221
210
97
pasta1 fab heavy chain
pasta1 fab kappa light chain
mus musculus
mus musculus
C
protein
tapasin
homo sapiens
39
19
0.9
HL
train
7tuf_H_L
7tuf
crystal structure of tapasin in complex with pasta1-fab
no
immune system
2022-02-02
2022-09-07
x-ray diffraction
2.8
0.274
0.231
36115831
10.1038/s41467-022-33153-8
0
auth_asym_id
FabH:FabL
IGHV4
IGKV3
H
L
DVQLQESGPGLVIPSQSLSLTCTVTGYSITTDYAWNWIRQFPGNRLEWMGYISSSGVTVYNPSLKSRISITRDTSKNQFFLQLISVTTEDTATYYCARRGYYRYDSIDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGCKGSHHHHHH
QIVLSQSPAILSASPGEKVTMTCRATSSVSYIHWYQQKPGSSPKPWIYATSSLTSGVPVRFSGSGSGTSYSLTISRVEAEDAATYYCQQWSSNPPTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
DVQLQESGPGLVIPSQSLSLTCTVTGYSITTDYAWNWIRQFPGNRLEWMGYISSSGVTVYNPSLKSRISITRDTSKNQFFLQLISVTTEDTATYYCARRGYYRYDSIDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRD
QIVLSQSPAILSASPGEKVTMTCRATSSVSYIHWYQQKPGSSPKPWIYATSSLTSGVPVRFSGSGSGTSYSLTISRVEAEDAATYYCQQWSSNPPTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR
21.618753
23.238468
233
213
221
210
221
210
91
pasta1 fab heavy chain
pasta1 fab kappa light chain
mus musculus
mus musculus
D
protein
tapasin
homo sapiens
38
20
0.91
HL
train
7r0j_D
7r0j
structure of the v2 receptor cter-arrestin2-scfv30 complex
no
membrane protein
2022-02-02
2022-09-14
electron microscopy
4.23
N.A.
N.A.
36054364
10.1126/sciadv.abo7761
0
auth_asym_id
scFv
N.A.
N.A.
D
N.A.
AMGDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYKYVPVTFGCGTKVEIKGTTAASGSSGGSSSGAEVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKCLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRQFWYSGLDYWGQGTLVTVSSAAADDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK
N.A.
GDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYKYVPVTFGCGTKVEIKGTTAASGSSGGSSSGAEVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKCLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRQFWYSGLDYWGQGTLVTVSSAA
N.A.
17.643274
0
284
0
229
0
246
0
0
scfv30
N.A.
synthetic construct
N.A.
C
protein
arrestin2
homo sapiens
54
19
0.7
H_only
train
7tuy_K
7tuy
cryo-em structure of gsk682753a-bound ebi2/gpr183
no
immune system
2022-02-03
2022-04-13
electron microscopy
2.98
N.A.
N.A.
35537452
10.1016/j.str.2022.04.006
0
auth_asym_id
VHH
IGHV3
N.A.
K
N.A.
HHHHHHGENLYFQGSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSS
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS
N.A.
13.775407
0
136
0
120
0
120
0
0
anti-fab nanobody
N.A.
synthetic construct
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
7tuy_H_L
7tuy
cryo-em structure of gsk682753a-bound ebi2/gpr183
no
immune system
2022-02-03
2022-04-13
electron microscopy
2.98
N.A.
N.A.
35537452
10.1016/j.str.2022.04.006
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EISEVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
EVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
23.624516
22.696032
229
215
225
212
225
212
109
anti-bril fab heavy chain
anti-bril fab light chain
homo sapiens
homo sapiens
R
protein
g-protein coupled receptor 183,soluble cytochrome b562 fusion
homo sapiens
44
19
0.86
HL
train
7tuz_E
7tuz
cryo-em structure of 7alpha,25-dihydroxycholesterol-bound ebi2/gpr183 in complex with gi protein
no
immune system
2022-02-03
2022-04-13
electron microscopy
3.12
N.A.
N.A.
35537452
10.1016/j.str.2022.04.006
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAENLYFQGHHHHHHHH
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.390055
0
266
0
232
0
246
0
0
scfv16
N.A.
mus musculus
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
35;20
20;9
0.87;0.82
H_only
train
7r1z_C
7r1z
c-terminal domain of harc in complex with nanobodies h11 and c11, collapsed crystal form
no
signaling protein
2022-02-03
2022-06-01
x-ray diffraction
1.94
0.242
0.197
35671319
10.1371/journal.pone.0269281
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
GSEVQLVESGGGLVQAGGSLRLSCAASGRTSGALNVAWYRQATGKEREYVARLWWNDGTTYYSDSVKGRFTISSDNAKKIVYLQMNRLKPDDTAIYYCAVRTPSSQTLYWGQGTQVTVSS
N.A.
EVQLVESGGGLVQAGGSLRLSCAASGRTSGALNVAWYRQATGKEREYVARLWWNDGTTYYSDSVKGRFTISSDNAKKIVYLQMNRLKPDDTAIYYCAVRTPSSQTLYWGQGTQVTVSS
N.A.
13.667497
0
120
0
118
0
118
0
0
nbarc-c11
N.A.
vicugna pacos
N.A.
A
protein
activity-regulated cytoskeleton-associated protein
rattus norvegicus
34
11
0.58
H_only
train
7r1z_E
7r1z
c-terminal domain of harc in complex with nanobodies h11 and c11, collapsed crystal form
no
signaling protein
2022-02-03
2022-06-01
x-ray diffraction
1.94
0.242
0.197
35671319
10.1371/journal.pone.0269281
0
auth_asym_id
VHH
IGHV3
N.A.
E
N.A.
GSEVQLLESGGGLVQAGDSLRLSCAASGRTFSAYAMGWFRQAPGKEREFVAAISWSGNSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAIYYCAARKPMYRVDISKGQNYDYWGQGTQVTVSS
N.A.
EVQLLESGGGLVQAGDSLRLSCAASGRTFSAYAMGWFRQAPGKEREFVAAISWSGNSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAIYYCAARKPMYRVDISKGQNYDYWGQGTQVTVS
N.A.
13.854469
0
128
0
125
0
125
0
0
nbarc-h11
N.A.
vicugna pacos
N.A.
A
protein
activity-regulated cytoskeleton-associated protein
rattus norvegicus
49
20
0.91
H_only
train
7r20_B
7r20
anti-arc nanobody e5
no
immune system
2022-02-03
2022-06-01
x-ray diffraction
1.42
0.237
0.185
35671319
10.1371/journal.pone.0269281
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
GSEVQLQESGGGLVQAGGSLRLSCAASGSIFSGNAMGWYRQAPGKQREVVAVISAGNSSNYVDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNVVKRGPQWGMEWGKGTLVTVSS
N.A.
EVQLQESGGGLVQAGGSLRLSCAASGSIFSGNAMGWYRQAPGKQREVVAVISAGNSSNYVDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCNVVKRGPQWGMEWGKGTLVTVSS
N.A.
13.355283
0
120
0
118
0
118
0
0
anti-arc nanobody e5
N.A.
vicugna pacos
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
7tus_A_B
7tus
sculpting a uniquely reactive cysteine residue for site-specific antibody conjugation
no
immune system
2022-02-03
2022-06-08
x-ray diffraction
2.4
0.257
0.218
35584359
10.1021/acs.bioconjchem.2c00146
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
A
B
EVQLVESGGGLVQPGGSLRLSCAASGFTFSNYWMSWVRQSPEKGLEWVSEIRLRSDNYATHYAESVKGRFTISRDNSKNTLYLQMNSLRAEDTGIYYCCTYFYSFSYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
ELQMTQSPSSLSASVGDRVTITCRSSQSLLHTYGSPYLNWYLQKPGQSPKLLIYKVSNRFSGVPSRFSGSGSGTDFTLTISSLQPEDFAVYFCSQGTHLPYTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFTFSNYWMSWVRQSPEKGLEWVSEIRLRSDNYATHYAESVKGRFTISRDNSKNTLYLQMNSLRAEDTGIYYCCTYFYSFSYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
ELQMTQSPSSLSASVGDRVTITCRSSQSLLHTYGSPYLNWYLQKPGQSPKLLIYKVSNRFSGVPSRFSGSGSGTDFTLTISSLQPEDFAVYFCSQGTHLPYTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
21.129229
23.441032
221
219
214
216
218
216
85
antibody heavy chain
antibody light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7tus_C_D
7tus
sculpting a uniquely reactive cysteine residue for site-specific antibody conjugation
no
immune system
2022-02-03
2022-06-08
x-ray diffraction
2.4
0.257
0.218
35584359
10.1021/acs.bioconjchem.2c00146
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
C
D
EVQLVESGGGLVQPGGSLRLSCAASGFTFSNYWMSWVRQSPEKGLEWVSEIRLRSDNYATHYAESVKGRFTISRDNSKNTLYLQMNSLRAEDTGIYYCCTYFYSFSYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
ELQMTQSPSSLSASVGDRVTITCRSSQSLLHTYGSPYLNWYLQKPGQSPKLLIYKVSNRFSGVPSRFSGSGSGTDFTLTISSLQPEDFAVYFCSQGTHLPYTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFTFSNYWMSWVRQSPEKGLEWVSEIRLRSDNYATHYAESVKGRFTISRDNSKNTLYLQMNSLRAEDTGIYYCCTYFYSFSYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
ELQMTQSPSSLSASVGDRVTITCRSSQSLLHTYGSPYLNWYLQKPGQSPKLLIYKVSNRFSGVPSRFSGSGSGTDFTLTISSLQPEDFAVYFCSQGTHLPYTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
21.050991
23.696903
221
219
215
216
219
216
93
antibody heavy chain
antibody light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7tus_E_F
7tus
sculpting a uniquely reactive cysteine residue for site-specific antibody conjugation
no
immune system
2022-02-03
2022-06-08
x-ray diffraction
2.4
0.257
0.218
35584359
10.1021/acs.bioconjchem.2c00146
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
E
F
EVQLVESGGGLVQPGGSLRLSCAASGFTFSNYWMSWVRQSPEKGLEWVSEIRLRSDNYATHYAESVKGRFTISRDNSKNTLYLQMNSLRAEDTGIYYCCTYFYSFSYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
ELQMTQSPSSLSASVGDRVTITCRSSQSLLHTYGSPYLNWYLQKPGQSPKLLIYKVSNRFSGVPSRFSGSGSGTDFTLTISSLQPEDFAVYFCSQGTHLPYTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFTFSNYWMSWVRQSPEKGLEWVSEIRLRSDNYATHYAESVKGRFTISRDNSKNTLYLQMNSLRAEDTGIYYCCTYFYSFSYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS
ELQMTQSPSSLSASVGDRVTITCRSSQSLLHTYGSPYLNWYLQKPGQSPKLLIYKVSNRFSGVPSRFSGSGSGTDFTLTISSLQPEDFAVYFCSQGTHLPYTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
20.816772
23.57125
221
219
209
216
220
216
97
antibody heavy chain
antibody light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7tus_G_H
7tus
sculpting a uniquely reactive cysteine residue for site-specific antibody conjugation
no
immune system
2022-02-03
2022-06-08
x-ray diffraction
2.4
0.257
0.218
35584359
10.1021/acs.bioconjchem.2c00146
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
G
H
EVQLVESGGGLVQPGGSLRLSCAASGFTFSNYWMSWVRQSPEKGLEWVSEIRLRSDNYATHYAESVKGRFTISRDNSKNTLYLQMNSLRAEDTGIYYCCTYFYSFSYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
ELQMTQSPSSLSASVGDRVTITCRSSQSLLHTYGSPYLNWYLQKPGQSPKLLIYKVSNRFSGVPSRFSGSGSGTDFTLTISSLQPEDFAVYFCSQGTHLPYTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFTFSNYWMSWVRQSPEKGLEWVSEIRLRSDNYATHYAESVKGRFTISRDNSKNTLYLQMNSLRAEDTGIYYCCTYFYSFSYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
ELQMTQSPSSLSASVGDRVTITCRSSQSLLHTYGSPYLNWYLQKPGQSPKLLIYKVSNRFSGVPSRFSGSGSGTDFTLTISSLQPEDFAVYFCSQGTHLPYTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
21.135859
23.779186
221
219
219
217
219
217
94
antibody heavy chain
antibody light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7wtf_H_L
7wtf
sars-cov-2 omicron variant spike in complex with fab xgv051
yes
immune system/viral protein
2022-02-04
2022-12-14
electron microscopy
3
N.A.
N.A.
35672388
10.1038/s41422-022-00677-z
0
auth_asym_id
VH:VL
IGHV1
IGKV1
H
L
VQLVQSGAEVKKPGSSVKVSCKASGGTFSNYALSWVRQAPGQGLEWMGGIIPIFGTTNYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARLDGYSFGHDRYYQDGMDDWGPGT
DIQMTQSPSSLSASVGDRVTITCRASQAIRNDLGWYQQKPGKAPKCLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYFCLQQNIYPRTFGQGTKV
VQLVQSGAEVKKPGSSVKVSCKASGGTFSNYALSWVRQAPGQGLEWMGGIIPIFGTTNYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARLDGYSFGHDRYYQDGMDDWGPGT
DIQMTQSPSSLSASVGDRVTITCRASQAIRNDLGWYQQKPGKAPKCLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYFCLQQNIYPRTFGQGTKV
14.735166
13.338327
120
104
120
104
120
104
38
heavy chain of xgv051
light chain of xgv051
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
37
14
0.93
HL
train
7wtf_G_J
7wtf
sars-cov-2 omicron variant spike in complex with fab xgv051
yes
immune system/viral protein
2022-02-04
2022-12-14
electron microscopy
3
N.A.
N.A.
35672388
10.1038/s41422-022-00677-z
0
auth_asym_id
VH:VL
IGHV1
IGKV1
G
J
VQLVQSGAEVKKPGSSVKVSCKASGGTFSNYALSWVRQAPGQGLEWMGGIIPIFGTTNYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARLDGYSFGHDRYYQDGMDDWGPGT
DIQMTQSPSSLSASVGDRVTITCRASQAIRNDLGWYQQKPGKAPKCLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYFCLQQNIYPRTFGQGTKV
VQLVQSGAEVKKPGSSVKVSCKASGGTFSNYALSWVRQAPGQGLEWMGGIIPIFGTTNYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARLDGYSFGHDRYYQDGMDDWGPGT
DIQMTQSPSSLSASVGDRVTITCRASQAIRNDLGWYQQKPGKAPKCLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYFCLQQNIYPRTFGQGTKV
14.654082
13.32296
120
104
120
104
120
104
40
heavy chain of xgv051
light chain of xgv051
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
44
16
0.89
HL
train
7wtf_I_K
7wtf
sars-cov-2 omicron variant spike in complex with fab xgv051
yes
immune system/viral protein
2022-02-04
2022-12-14
electron microscopy
3
N.A.
N.A.
35672388
10.1038/s41422-022-00677-z
0
auth_asym_id
VH:VL
IGHV1
IGKV1
I
K
VQLVQSGAEVKKPGSSVKVSCKASGGTFSNYALSWVRQAPGQGLEWMGGIIPIFGTTNYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARLDGYSFGHDRYYQDGMDDWGPGT
DIQMTQSPSSLSASVGDRVTITCRASQAIRNDLGWYQQKPGKAPKCLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYFCLQQNIYPRTFGQGTKV
VQLVQSGAEVKKPGSSVKVSCKASGGTFSNYALSWVRQAPGQGLEWMGGIIPIFGTTNYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARLDGYSFGHDRYYQDGMDDWGPGT
DIQMTQSPSSLSASVGDRVTITCRASQAIRNDLGWYQQKPGKAPKCLIYAASSLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYFCLQQNIYPRTFGQGTKV
14.553017
13.125341
120
104
120
104
120
104
36
heavy chain of xgv051
light chain of xgv051
homo sapiens
homo sapiens
D
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
44
15
0.83
HL
train
7wtj_H_L
7wtj
sars-cov-2 omicron variant spike rbd in complex with fab xgv286
yes
immune system/viral protein
2022-02-04
2022-12-14
electron microscopy
4.2
N.A.
N.A.
35672388
10.1038/s41422-022-00677-z
0
auth_asym_id
VH:VL
IGHV1
IGLV1
H
L
VQLVQSGAEVKKPGASVKVSCKASGYTFSSYYIHWVRQAPGQGPEWMAIINPGDGGASYAQKFQGRVTLTRDTSTSTLYMELSSLRSEDTAVYYCARAEGSSWLGWFDPWGQGTLVTV
SVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSRSGTSASLAISGLRSEDEADYYCAAWDDGLSGSGWVFGGGTKLT
VQLVQSGAEVKKPGASVKVSCKASGYTFSSYYIHWVRQAPGQGPEWMAIINPGDGGASYAQKFQGRVTLTRDTSTSTLYMELSSLRSEDTAVYYCARAEGSSWLGWFDPWGQGTLVTV
SVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSRSGTSASLAISGLRSEDEADYYCAAWDDGLSGSGWVFGGGTKLT
13.876243
13.756796
118
109
118
109
118
109
36
heavy chain of xgv286
light chain of xgv286
homo sapiens
homo sapiens
E
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
35
15
0.71
HL
train
7wtk_I_K
7wtk
sars-cov-2 omicron variant spike in complex with fab xgv286
yes
viral protein/immune system
2022-02-04
2022-12-14
electron microscopy
3.6
N.A.
N.A.
35672388
10.1038/s41422-022-00677-z
0
auth_asym_id
VH:VL
IGHV1
IGLV1
I
K
VQLVQSGAEVKKPGASVKVSCKASGYTFSSYYIHWVRQAPGQGPEWMAIINPGDGGASYAQKFQGRVTLTRDTSTSTLYMELSSLRSEDTAVYYCARAEGSSWLGWFDPWGQGTLVTV
SVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSRSGTSASLAISGLRSEDEADYYCAAWDDGLSGSGWVFGGGTKLT
VQLVQSGAEVKKPGASVKVSCKASGYTFSSYYIHWVRQAPGQGPEWMAIINPGDGGASYAQKFQGRVTLTRDTSTSTLYMELSSLRSEDTAVYYCARAEGSSWLGWFDPWGQGTLVTV
SVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSRSGTSASLAISGLRSEDEADYYCAAWDDGLSGSGWVFGGGTKLT
13.670694
13.737481
118
109
118
109
118
109
34
heavy chain of xgv286
light chain of xgv286
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
32
13
0.68
HL
train
7wtk_G_J
7wtk
sars-cov-2 omicron variant spike in complex with fab xgv286
yes
viral protein/immune system
2022-02-04
2022-12-14
electron microscopy
3.6
N.A.
N.A.
35672388
10.1038/s41422-022-00677-z
0
auth_asym_id
VH:VL
IGHV1
IGLV1
G
J
VQLVQSGAEVKKPGASVKVSCKASGYTFSSYYIHWVRQAPGQGPEWMAIINPGDGGASYAQKFQGRVTLTRDTSTSTLYMELSSLRSEDTAVYYCARAEGSSWLGWFDPWGQGTLVTV
SVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSRSGTSASLAISGLRSEDEADYYCAAWDDGLSGSGWVFGGGTKLT
VQLVQSGAEVKKPGASVKVSCKASGYTFSSYYIHWVRQAPGQGPEWMAIINPGDGGASYAQKFQGRVTLTRDTSTSTLYMELSSLRSEDTAVYYCARAEGSSWLGWFDPWGQGTLVTV
SVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSRSGTSASLAISGLRSEDEADYYCAAWDDGLSGSGWVFGGGTKLT
13.902532
13.718514
118
109
118
109
118
109
35
heavy chain of xgv286
light chain of xgv286
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
34
14
0.7
HL
train
7wtk_H_L
7wtk
sars-cov-2 omicron variant spike in complex with fab xgv286
yes
viral protein/immune system
2022-02-04
2022-12-14
electron microscopy
3.6
N.A.
N.A.
35672388
10.1038/s41422-022-00677-z
0
auth_asym_id
VH:VL
IGHV1
IGLV1
H
L
VQLVQSGAEVKKPGASVKVSCKASGYTFSSYYIHWVRQAPGQGPEWMAIINPGDGGASYAQKFQGRVTLTRDTSTSTLYMELSSLRSEDTAVYYCARAEGSSWLGWFDPWGQGTLVTV
SVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSRSGTSASLAISGLRSEDEADYYCAAWDDGLSGSGWVFGGGTKLT
VQLVQSGAEVKKPGASVKVSCKASGYTFSSYYIHWVRQAPGQGPEWMAIINPGDGGASYAQKFQGRVTLTRDTSTSTLYMELSSLRSEDTAVYYCARAEGSSWLGWFDPWGQGTLVTV
SVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSRSGTSASLAISGLRSEDEADYYCAAWDDGLSGSGWVFGGGTKLT
13.895984
13.821421
118
109
118
109
118
109
36
heavy chain of xgv286
light chain of xgv286
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
36
15
0.65
HL
train
7wti_H_L
7wti
sars-cov-2 omicron variant spike in complex with fab xgv264
yes
viral protein/immune system
2022-02-04
2022-12-21
electron microscopy
3.8
N.A.
N.A.
35672388
10.1038/s41422-022-00677-z
0
auth_asym_id
VH:VL
IGHV2
IGLV2
H
L
ITLKESGPTLVKPTQTLTLTCAFSGFSLNTGGAGVGWIRQPPGKALEWLALIYWDGDKRYNPSLKSRLAIIMDTSKNRVVLTMTNMDPVDTATYYCAHHKIEYIFDYWGQGTLVAVSS
ALTQPASVSGSPGQSITVSCTGTSSDLGNFQYVSWYQHHPGKAPKLLIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYTTTTIPVAFGGGTKLTVLGQ
ITLKESGPTLVKPTQTLTLTCAFSGFSLNTGGAGVGWIRQPPGKALEWLALIYWDGDKRYNPSLKSRLAIIMDTSKNRVVLTMTNMDPVDTATYYCAHHKIEYIFDYWGQGTLVAVSS
ALTQPASVSGSPGQSITVSCTGTSSDLGNFQYVSWYQHHPGKAPKLLIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYTTTTIPVAFGGGTKLTVLGQ
13.997562
14.016431
118
111
118
111
118
111
40
heavy chain of xgv264
light chain of xgv264
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
39
17
0.81
HL
train
7wti_G_J
7wti
sars-cov-2 omicron variant spike in complex with fab xgv264
yes
viral protein/immune system
2022-02-04
2022-12-21
electron microscopy
3.8
N.A.
N.A.
35672388
10.1038/s41422-022-00677-z
0
auth_asym_id
VH:VL
IGHV2
IGLV2
G
J
ITLKESGPTLVKPTQTLTLTCAFSGFSLNTGGAGVGWIRQPPGKALEWLALIYWDGDKRYNPSLKSRLAIIMDTSKNRVVLTMTNMDPVDTATYYCAHHKIEYIFDYWGQGTLVAVSS
ALTQPASVSGSPGQSITVSCTGTSSDLGNFQYVSWYQHHPGKAPKLLIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYTTTTIPVAFGGGTKLTVLGQ
ITLKESGPTLVKPTQTLTLTCAFSGFSLNTGGAGVGWIRQPPGKALEWLALIYWDGDKRYNPSLKSRLAIIMDTSKNRVVLTMTNMDPVDTATYYCAHHKIEYIFDYWGQGTLVAVSS
ALTQPASVSGSPGQSITVSCTGTSSDLGNFQYVSWYQHHPGKAPKLLIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYTTTTIPVAFGGGTKLTVLGQ
13.977372
14.002359
118
111
118
111
118
111
41
heavy chain of xgv264
light chain of xgv264
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
34
14
0.78
HL
train
7wti_I_K
7wti
sars-cov-2 omicron variant spike in complex with fab xgv264
yes
viral protein/immune system
2022-02-04
2022-12-21
electron microscopy
3.8
N.A.
N.A.
35672388
10.1038/s41422-022-00677-z
0
auth_asym_id
VH:VL
IGHV2
IGLV2
I
K
ITLKESGPTLVKPTQTLTLTCAFSGFSLNTGGAGVGWIRQPPGKALEWLALIYWDGDKRYNPSLKSRLAIIMDTSKNRVVLTMTNMDPVDTATYYCAHHKIEYIFDYWGQGTLVAVSS
ALTQPASVSGSPGQSITVSCTGTSSDLGNFQYVSWYQHHPGKAPKLLIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYTTTTIPVAFGGGTKLTVLGQ
ITLKESGPTLVKPTQTLTLTCAFSGFSLNTGGAGVGWIRQPPGKALEWLALIYWDGDKRYNPSLKSRLAIIMDTSKNRVVLTMTNMDPVDTATYYCAHHKIEYIFDYWGQGTLVAVSS
ALTQPASVSGSPGQSITVSCTGTSSDLGNFQYVSWYQHHPGKAPKLLIYEVSKRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCCSYTTTTIPVAFGGGTKLTVLGQ
14.0802
13.991448
118
111
118
111
118
111
38
heavy chain of xgv264
light chain of xgv264
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
34
14
0.78
HL
train
7wt7_H_D
7wt7
sars-cov-2 omicron variant spike in complex with fab 9a8 (state 1)
yes
viral protein/immune system
2022-02-04
2023-06-07
electron microscopy
3.4
N.A.
N.A.
35977939
10.1038/s41421-022-00443-w
0
auth_asym_id
VH:VL
IGHV3
IGKV1
H
D
VQLVESGGGLVQPGGSLRLSCAASGIIVSSNYMSWVRQGPGKGLEWVSVIYSGGSTYYADSVKARFTISRDNSKNTLYLQMNSLRAEDTAVYYCAREVVGSNSNMDVWGQGTTVTVSSASTK
DIQMTQSPSSLSASVGDRVTITCQASQDINIYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTINSLQPEDIATYYCQQYDNLPRTFGQGTKVEIK
VQLVESGGGLVQPGGSLRLSCAASGIIVSSNYMSWVRQGPGKGLEWVSVIYSGGSTYYADSVKARFTISRDNSKNTLYLQMNSLRAEDTAVYYCAREVVGSNSNMDVWGQGTTVTVSSASTK
DIQMTQSPSSLSASVGDRVTITCQASQDINIYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTINSLQPEDIATYYCQQYDNLPRTFGQGTKVEIK
14.51995
13.338047
122
107
122
107
122
107
48
heavy chain of fab 9a8
light chain of fab 9a8
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
53
21
0.78
HL
train
7wt8_J_I
7wt8
sars-cov-2 omicron variant spike in complex with fab 9a8 (state 2)
yes
viral protein/immune system
2022-02-04
2023-06-07
electron microscopy
3.6
N.A.
N.A.
35977939
10.1038/s41421-022-00443-w
0
auth_asym_id
VH:VL
IGHV3
IGKV1
J
I
VQLVESGGGLVQPGGSLRLSCAASGIIVSSNYMSWVRQGPGKGLEWVSVIYSGGSTYYADSVKARFTISRDNSKNTLYLQMNSLRAEDTAVYYCAREVVGSNSNMDVWGQGTTVTVSSASTK
DIQMTQSPSSLSASVGDRVTITCQASQDINIYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTINSLQPEDIATYYCQQYDNLPRTFGQGTKVEIK
VQLVESGGGLVQPGGSLRLSCAASGIIVSSNYMSWVRQGPGKGLEWVSVIYSGGSTYYADSVKARFTISRDNSKNTLYLQMNSLRAEDTAVYYCAREVVGSNSNMDVWGQGTTVTVSSASTK
DIQMTQSPSSLSASVGDRVTITCQASQDINIYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTINSLQPEDIATYYCQQYDNLPRTFGQGTKVEIK
14.644157
13.41171
122
107
122
107
122
107
50
heavy chain of fab 9a8
light chain of fab 9a8
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
48
21
0.81
HL
train
7wt8_H_D
7wt8
sars-cov-2 omicron variant spike in complex with fab 9a8 (state 2)
yes
viral protein/immune system
2022-02-04
2023-06-07
electron microscopy
3.6
N.A.
N.A.
35977939
10.1038/s41421-022-00443-w
0
auth_asym_id
VH:VL
IGHV3
IGKV1
H
D
VQLVESGGGLVQPGGSLRLSCAASGIIVSSNYMSWVRQGPGKGLEWVSVIYSGGSTYYADSVKARFTISRDNSKNTLYLQMNSLRAEDTAVYYCAREVVGSNSNMDVWGQGTTVTVSSASTK
DIQMTQSPSSLSASVGDRVTITCQASQDINIYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTINSLQPEDIATYYCQQYDNLPRTFGQGTKVEIK
VQLVESGGGLVQPGGSLRLSCAASGIIVSSNYMSWVRQGPGKGLEWVSVIYSGGSTYYADSVKARFTISRDNSKNTLYLQMNSLRAEDTAVYYCAREVVGSNSNMDVWGQGTTVTVSSASTK
DIQMTQSPSSLSASVGDRVTITCQASQDINIYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTINSLQPEDIATYYCQQYDNLPRTFGQGTKVEIK
14.613034
13.270637
122
107
122
107
122
107
43
heavy chain of fab 9a8
light chain of fab 9a8
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
52
20
0.8
HL
train
7wu3_N
7wu3
cryo-em structure of the adhesion gpcr adgrf1 in complex with minigs
no
membrane protein
2022-02-05
2022-04-27
electron microscopy
3.1
N.A.
N.A.
35418679
10.1038/s41586-022-04580-w
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
MGMKYLLPTAAAGLLLLAAQPAMAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVS
N.A.
13.618862
0
162
0
127
0
127
0
0
nanobody nb35
N.A.
lama glama
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
48;34
14;12
0.56;0.67
H_only
train
7wue_C_D
7wue
crystal structure of sars-cov-2 receptor binding domain in complex with the monoclonal antibody m31a7
no
viral protein/immune system
2022-02-08
2022-03-16
x-ray diffraction
3.2
0.295
0.228
35230146
10.1126/scitranslmed.abm0899
0
auth_asym_id
FabH:FabL
IGHV1
IGKV4
C
D
MGWSLILLFLVAVATRVEVQLQQSGPEMVKPGASVKISCKTSGYTFTEYTIYWVKQSHGKSLEWLGGINPNIGDTTYNQKFKGKATLTVDTSSSTAYMELRSLTSEDSAVYYCAREVYNYSFAYWGQGTLVTVSAASTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSC
MRVPAQLLGLLLLWLPGARCDIVMSQSPSSLAVSVGEKVTMSCKSSQSLLYSSNQKNYLAWYQQKLGQTPKLLIYWASSRESGVPDRFTGSGSGTDFTLTISSVRAEDLAVYYCQQYYRYPLTFGVGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLQQSGPEMVKPGASVKISCKTSGYTFTEYTIYWVKQSHGKSLEWLGGINPNIGDTTYNQKFKGKATLTVDTSSSTAYMELRSLTSEDSAVYYCAREVYNYSFAYWGQGTLVTVSAASTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAE
DIVMSQSPSSLAVSVGEKVTMSCKSSQSLLYSSNQKNYLAWYQQKLGQTPKLLIYWASSRESGVPDRFTGSGSGTDFTLTISSVRAEDLAVYYCQQYYRYPLTFGVGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
20.922335
24.31041
239
240
218
219
218
219
98
m31a7 fab heavy chain
m31a7 fab light chain
mus musculus
mus musculus
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
37
18
0.75
HL
train
7wue_E_F
7wue
crystal structure of sars-cov-2 receptor binding domain in complex with the monoclonal antibody m31a7
no
viral protein/immune system
2022-02-08
2022-03-16
x-ray diffraction
3.2
0.295
0.228
35230146
10.1126/scitranslmed.abm0899
0
auth_asym_id
FabH:FabL
IGHV1
IGKV4
E
F
MGWSLILLFLVAVATRVEVQLQQSGPEMVKPGASVKISCKTSGYTFTEYTIYWVKQSHGKSLEWLGGINPNIGDTTYNQKFKGKATLTVDTSSSTAYMELRSLTSEDSAVYYCAREVYNYSFAYWGQGTLVTVSAASTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSC
MRVPAQLLGLLLLWLPGARCDIVMSQSPSSLAVSVGEKVTMSCKSSQSLLYSSNQKNYLAWYQQKLGQTPKLLIYWASSRESGVPDRFTGSGSGTDFTLTISSVRAEDLAVYYCQQYYRYPLTFGVGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLQQSGPEMVKPGASVKISCKTSGYTFTEYTIYWVKQSHGKSLEWLGGINPNIGDTTYNQKFKGKATLTVDTSSSTAYMELRSLTSEDSAVYYCAREVYNYSFAYWGQGTLVTVSAASTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAE
DIVMSQSPSSLAVSVGEKVTMSCKSSQSLLYSSNQKNYLAWYQQKLGQTPKLLIYWASSRESGVPDRFTGSGSGTDFTLTISSVRAEDLAVYYCQQYYRYPLTFGVGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.9112
23.911346
239
240
218
219
218
219
106
m31a7 fab heavy chain
m31a7 fab light chain
mus musculus
mus musculus
B
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
35
16
0.7
HL
train
7wuh_K_L
7wuh
sars-cov-2 spike in complex with fab of m31a7
yes
viral protein/immune system
2022-02-08
2022-03-23
electron microscopy
4.7
N.A.
N.A.
35230146
10.1126/scitranslmed.abm0899
0
auth_asym_id
FabH:FabL
IGHV1
IGKV4
K
L
MGWSLILLFLVAVATRVEVQLQQSGPEMVKPGASVKISCKTSGYTFTEYTIYWVKQSHGKSLEWLGGINPNIGDTTYNQKFKGKATLTVDTSSSTAYMELRSLTSEDSAVYYCAREVYNYSFAYWGQGTLVTVSAASTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSC
MRVPAQLLGLLLLWLPGARCDIVMSQSPSSLAVSVGEKVTMSCKSSQSLLYSSNQKNYLAWYQQKLGQTPKLLIYWASSRESGVPDRFTGSGSGTDFTLTISSVRAEDLAVYYCQQYYRYPLTFGVGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLQQSGPEMVKPGASVKISCKTSGYTFTEYTIYWVKQSHGKSLEWLGGINPNIGDTTYNQKFKGKATLTVDTSSSTAYMELRSLTSEDSAVYYCAREVYNYSFAYWGQGTLVTVSAASTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAE
DIVMSQSPSSLAVSVGEKVTMSCKSSQSLLYSSNQKNYLAWYQQKLGQTPKLLIYWASSRESGVPDRFTGSGSGTDFTLTISSVRAEDLAVYYCQQYYRYPLTFGVGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
23.230305
23.690617
239
240
218
219
218
219
106
m31a7 fab heavy chain
m31a7 fab light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
29
12
0.67
HL
train
7wuh_D_F
7wuh
sars-cov-2 spike in complex with fab of m31a7
yes
viral protein/immune system
2022-02-08
2022-03-23
electron microscopy
4.7
N.A.
N.A.
35230146
10.1126/scitranslmed.abm0899
0
auth_asym_id
FabH:FabL
IGHV1
IGKV4
D
F
MGWSLILLFLVAVATRVEVQLQQSGPEMVKPGASVKISCKTSGYTFTEYTIYWVKQSHGKSLEWLGGINPNIGDTTYNQKFKGKATLTVDTSSSTAYMELRSLTSEDSAVYYCAREVYNYSFAYWGQGTLVTVSAASTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSC
MRVPAQLLGLLLLWLPGARCDIVMSQSPSSLAVSVGEKVTMSCKSSQSLLYSSNQKNYLAWYQQKLGQTPKLLIYWASSRESGVPDRFTGSGSGTDFTLTISSVRAEDLAVYYCQQYYRYPLTFGVGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLQQSGPEMVKPGASVKISCKTSGYTFTEYTIYWVKQSHGKSLEWLGGINPNIGDTTYNQKFKGKATLTVDTSSSTAYMELRSLTSEDSAVYYCAREVYNYSFAYWGQGTLVTVSAASTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAE
DIVMSQSPSSLAVSVGEKVTMSCKSSQSLLYSSNQKNYLAWYQQKLGQTPKLLIYWASSRESGVPDRFTGSGSGTDFTLTISSVRAEDLAVYYCQQYYRYPLTFGVGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
23.534285
24.581173
239
240
218
219
218
219
105
m31a7 fab heavy chain
m31a7 fab light chain
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
36
16
0.73
HL
train
7wuh_H_I
7wuh
sars-cov-2 spike in complex with fab of m31a7
yes
viral protein/immune system
2022-02-08
2022-03-23
electron microscopy
4.7
N.A.
N.A.
35230146
10.1126/scitranslmed.abm0899
0
auth_asym_id
FabH:FabL
IGHV1
IGKV4
H
I
MGWSLILLFLVAVATRVEVQLQQSGPEMVKPGASVKISCKTSGYTFTEYTIYWVKQSHGKSLEWLGGINPNIGDTTYNQKFKGKATLTVDTSSSTAYMELRSLTSEDSAVYYCAREVYNYSFAYWGQGTLVTVSAASTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSC
MRVPAQLLGLLLLWLPGARCDIVMSQSPSSLAVSVGEKVTMSCKSSQSLLYSSNQKNYLAWYQQKLGQTPKLLIYWASSRESGVPDRFTGSGSGTDFTLTISSVRAEDLAVYYCQQYYRYPLTFGVGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLQQSGPEMVKPGASVKISCKTSGYTFTEYTIYWVKQSHGKSLEWLGGINPNIGDTTYNQKFKGKATLTVDTSSSTAYMELRSLTSEDSAVYYCAREVYNYSFAYWGQGTLVTVSAASTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAE
DIVMSQSPSSLAVSVGEKVTMSCKSSQSLLYSSNQKNYLAWYQQKLGQTPKLLIYWASSRESGVPDRFTGSGSGTDFTLTISSVRAEDLAVYYCQQYYRYPLTFGVGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
23.401768
24.629648
239
240
218
219
218
219
97
m31a7 fab heavy chain
m31a7 fab light chain
homo sapiens
homo sapiens
E
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
47
18
0.67
HL
train
7r40_H_L
7r40
structure of the sars-cov-2 spike glycoprotein in complex with the 87g7 antibody fab fragment
yes
viral protein
2022-02-08
2022-04-20
electron microscopy
2.9
N.A.
N.A.
35471062
10.1126/sciimmunol.abp9312
0
auth_asym_id
VH:VL
IGHV3
IGKV3
H
L
EVQLLESGGGLVQPGGSLRLSCVASGFTFSSYVMSWVRQAPGKGLEWVAAISGSGGNTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKEGTYYYGSGSFWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
EIVLTQSPATLSLSPGERATLSCRASQSFHNYLAWYQQKPGRAPRLLIFDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRFNWPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLLESGGGLVQPGGSLRLSCVASGFTFSSYVMSWVRQAPGKGLEWVAAISGSGGNTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKEGTYYYGSGSFWGQGTLVTVSS
EIVLTQSPATLSLSPGERATLSCRASQSFHNYLAWYQQKPGRAPRLLIFDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRFNWPLTFGGGTKVEIK
14.160823
13.803269
227
214
120
107
120
107
42
87g7 heavy chain variable region
87g7 light chain variable region
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
28
13
0.87
HL
train
7r40_D_F
7r40
structure of the sars-cov-2 spike glycoprotein in complex with the 87g7 antibody fab fragment
yes
viral protein
2022-02-08
2022-04-20
electron microscopy
2.9
N.A.
N.A.
35471062
10.1126/sciimmunol.abp9312
0
auth_asym_id
VH:VL
IGHV3
IGKV3
D
F
EVQLLESGGGLVQPGGSLRLSCVASGFTFSSYVMSWVRQAPGKGLEWVAAISGSGGNTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKEGTYYYGSGSFWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
EIVLTQSPATLSLSPGERATLSCRASQSFHNYLAWYQQKPGRAPRLLIFDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRFNWPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLLESGGGLVQPGGSLRLSCVASGFTFSSYVMSWVRQAPGKGLEWVAAISGSGGNTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKEGTYYYGSGSFWGQGTLVTVSS
EIVLTQSPATLSLSPGERATLSCRASQSFHNYLAWYQQKPGRAPRLLIFDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRFNWPLTFGGGTKVEIK
14.160816
13.803282
227
214
120
107
120
107
42
87g7 heavy chain variable region
87g7 light chain variable region
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
26
13
0.93
HL
train
7r40_E_G
7r40
structure of the sars-cov-2 spike glycoprotein in complex with the 87g7 antibody fab fragment
yes
viral protein
2022-02-08
2022-04-20
electron microscopy
2.9
N.A.
N.A.
35471062
10.1126/sciimmunol.abp9312
0
auth_asym_id
VH:VL
IGHV3
IGKV3
E
G
EVQLLESGGGLVQPGGSLRLSCVASGFTFSSYVMSWVRQAPGKGLEWVAAISGSGGNTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKEGTYYYGSGSFWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
EIVLTQSPATLSLSPGERATLSCRASQSFHNYLAWYQQKPGRAPRLLIFDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRFNWPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLLESGGGLVQPGGSLRLSCVASGFTFSSYVMSWVRQAPGKGLEWVAAISGSGGNTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKEGTYYYGSGSFWGQGTLVTVSS
EIVLTQSPATLSLSPGERATLSCRASQSFHNYLAWYQQKPGRAPRLLIFDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRFNWPLTFGGGTKVEIK
14.160809
13.80329
227
214
120
107
120
107
42
87g7 heavy chain variable region
87g7 light chain variable region
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
26
13
0.93
HL
train
7wui_N
7wui
tethered peptide activation mechanism of adhesion gpcrs adgrg2 and adgrg4
yes
membrane protein
2022-02-08
2022-04-27
electron microscopy
3.1
N.A.
N.A.
35418677
10.1038/s41586-022-04590-8
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV
N.A.
13.380198
0
128
0
126
0
126
0
0
nanobody-35
N.A.
lama glama
N.A.
A;B
protein;protein
mini-gs;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
56;37
15;13
0.52;0.68
H_only
train
7wui_S
7wui
tethered peptide activation mechanism of adhesion gpcrs adgrg2 and adgrg4
yes
membrane protein
2022-02-08
2022-04-27
electron microscopy
3.1
N.A.
N.A.
35418677
10.1038/s41586-022-04590-8
0
auth_asym_id
scFv
N.A.
N.A.
S
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKGS
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKL
N.A.
16.68885
0
250
0
220
0
244
0
0
scfv16
N.A.
synthetic construct
N.A.
A;B
protein;protein
mini-gs;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
35;28
21;11
0.91;0.79
H_only
train
7wuj_S
7wuj
tethered peptide activation mechanism of adhesion gpcrs adgrg2 and adgrg4
no
membrane protein
2022-02-08
2022-04-27
electron microscopy
3.3
N.A.
N.A.
35418677
10.1038/s41586-022-04590-8
0
auth_asym_id
scFv
N.A.
N.A.
S
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKGS
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLE
N.A.
16.619802
0
250
0
222
0
245
0
0
scfv16
N.A.
synthetic construct
N.A.
A;B
protein;protein
mini-gs;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
30;26
17;11
0.85;0.85
H_only
train
7wuj_N
7wuj
tethered peptide activation mechanism of adhesion gpcrs adgrg2 and adgrg4
no
membrane protein
2022-02-08
2022-04-27
electron microscopy
3.3
N.A.
N.A.
35418677
10.1038/s41586-022-04590-8
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAY
N.A.
13.02143
0
128
0
97
0
117
0
0
nanobody-35
N.A.
lama glama
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
7r4i_D
7r4i
the sars-cov-2 spike in complex with the 2.15 neutralizing nanobody
no
viral protein
2022-02-08
2022-06-08
electron microscopy
3.2
N.A.
N.A.
35547740
10.3389/fimmu.2022.863831
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
QVQLVESGGGSVQAGGSLKLSCAASGYASWARKCIGWFRQAPGQEREGVAAIFDFDGSTYYSDSVKGRFTISGDNAKNTVSLQMNSLLPKDTAVYYCTVAFGTCDNWYRGRGDYWGQGTQVTVSSALVPR
N.A.
QVQLVESGGGSVQAGGSLKLSCAASGYASWARKCIGWFRQAPGQEREGVAAIFDFDGSTYYSDSVKGRFTISGDNAKNTVSLQMNSLLPKDTAVYYCTVAFGTCDNWYRGRGDYWGQGTQVTVSS
N.A.
13.546565
0
130
0
125
0
125
0
0
camel-derived nanobody 2.15
N.A.
camelus dromedarius
N.A.
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
36
13
0.72
H_only
train
7r4i_E
7r4i
the sars-cov-2 spike in complex with the 2.15 neutralizing nanobody
no
viral protein
2022-02-08
2022-06-08
electron microscopy
3.2
N.A.
N.A.
35547740
10.3389/fimmu.2022.863831
0
auth_asym_id
VHH
IGHV3
N.A.
E
N.A.
QVQLVESGGGSVQAGGSLKLSCAASGYASWARKCIGWFRQAPGQEREGVAAIFDFDGSTYYSDSVKGRFTISGDNAKNTVSLQMNSLLPKDTAVYYCTVAFGTCDNWYRGRGDYWGQGTQVTVSSALVPR
N.A.
QVQLVESGGGSVQAGGSLKLSCAASGYASWARKCIGWFRQAPGQEREGVAAIFDFDGSTYYSDSVKGRFTISGDNAKNTVSLQMNSLLPKDTAVYYCTVAFGTCDNWYRGRGDYWGQGTQVTVSS
N.A.
13.34691
0
130
0
125
0
125
0
0
camel-derived nanobody 2.15
N.A.
camelus dromedarius
N.A.
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
42
14
0.7
H_only
train
7wuq_N
7wuq
tethered peptide activation mechanism of adhesion gpcrs adgrg2 and adgrg4
yes
membrane protein
2022-02-09
2022-04-27
electron microscopy
2.9
N.A.
N.A.
35418677
10.1038/s41586-022-04590-8
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVS
N.A.
13.5004
0
128
0
127
0
127
0
0
nanobody-35
N.A.
lama glama
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
57;39
15;11
0.48;0.61
H_only
train
7r4q_E
7r4q
the sars-cov-2 spike in complex with the 1.29 neutralizing nanobody
yes
viral protein
2022-02-09
2022-06-08
electron microscopy
3.6
N.A.
N.A.
35547740
10.3389/fimmu.2022.863831
0
auth_asym_id
VHH
IGHV3
N.A.
E
N.A.
QVQLVESGGGSVQAGGSLRLSCAASGYTINTDAVAWFRQAPGKGDERVAVIYTGSGNTNYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTALYYCASGYYGASGYDFNNWGQGTQVTVSSALVPR
N.A.
QVQLVESGGGSVQAGGSLRLSCAASGYTINTDAVAWFRQAPGKGDERVAVIYTGSGNTNYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTALYYCASGYYGASGYDFNNWGQGTQVTVS
N.A.
13.490071
0
126
0
120
0
120
0
0
camel-derived nanobody 1.29
N.A.
camelus dromedarius
N.A.
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
43
8
0.4
H_only
train
7r4q_D
7r4q
the sars-cov-2 spike in complex with the 1.29 neutralizing nanobody
yes
viral protein
2022-02-09
2022-06-08
electron microscopy
3.6
N.A.
N.A.
35547740
10.3389/fimmu.2022.863831
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
QVQLVESGGGSVQAGGSLRLSCAASGYTINTDAVAWFRQAPGKGDERVAVIYTGSGNTNYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTALYYCASGYYGASGYDFNNWGQGTQVTVSSALVPR
N.A.
QVQLVESGGGSVQAGGSLRLSCAASGYTINTDAVAWFRQAPGKGDERVAVIYTGSGNTNYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTALYYCASGYYGASGYDFNNWGQGTQVTVS
N.A.
13.49006
0
126
0
120
0
120
0
0
camel-derived nanobody 1.29
N.A.
camelus dromedarius
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
7r4r_D
7r4r
the sars-cov-2 spike in complex with the 1.10 neutralizing nanobody
yes
viral protein
2022-02-09
2022-06-08
electron microscopy
3.9
N.A.
N.A.
35547740
10.3389/fimmu.2022.863831
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
QVQLVESGGGSVQAGGSLRLSCAASGYTYSTCRKGWYRQAPGKERELVASITADGATYYLDSVKGRLTISQDNAKNTVYLQMNSLKPEDTAVYYCAASVKDFTCTFNSWGQGTQVTVSSALVPR
N.A.
QVQLVESGGGSVQAGGSLRLSCAASGYTYSTCRKGWYRQAPGKERELVASITADGATYYLDSVKGRLTISQDNAKNTVYLQMNSLKPEDTAVYYCAASVKDFTCTFNSWGQGTQVTVSS
N.A.
13.788273
0
124
0
119
0
119
0
0
camel-derived nanobody 1.10
N.A.
camelus dromedarius
N.A.
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
46
18
0.78
H_only
train
7wur_E_F
7wur
cryoem structure of sns1 complexed with fab5e3
no
viral protein/immune system
2022-02-09
2022-12-21
electron microscopy
3.5
N.A.
N.A.
36347841
10.1038/s41467-022-34415-1
0
auth_asym_id
VH:VL
IGHV3
IGKV3
E
F
QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISTGSSHTDYADSVKGRFTISRDNTKNSLYLQLNSLRDEDTAVYYCASGYRFSYVSYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASTRATGIPDRFTGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPAWTFGQGTKVEI
QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISTGSSHTDYADSVKGRFTISRDNTKNSLYLQLNSLRDEDTAVYYCASGYRFSYVSYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASTRATGIPDRFTGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPAWTFGQGTKVEI
13.565971
13.291719
118
108
118
108
118
108
40
fab 5e3 heavy chain
fab 5e3 light chain
homo sapiens
homo sapiens
A
protein
core protein
dengue virus 2
37
14
0.78
HL
train
7wur_G_H
7wur
cryoem structure of sns1 complexed with fab5e3
no
viral protein/immune system
2022-02-09
2022-12-21
electron microscopy
3.5
N.A.
N.A.
36347841
10.1038/s41467-022-34415-1
0
auth_asym_id
VH:VL
IGHV3
IGKV3
G
H
QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISTGSSHTDYADSVKGRFTISRDNTKNSLYLQLNSLRDEDTAVYYCASGYRFSYVSYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASTRATGIPDRFTGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPAWTFGQGTKVEI
QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISTGSSHTDYADSVKGRFTISRDNTKNSLYLQLNSLRDEDTAVYYCASGYRFSYVSYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASTRATGIPDRFTGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPAWTFGQGTKVEI
13.561125
13.280945
118
108
118
108
118
108
41
fab 5e3 heavy chain
fab 5e3 light chain
homo sapiens
homo sapiens
B
protein
core protein
dengue virus 2
34
14
0.93
HL
train
7txz_E_F
7txz
nipah virus attachment (g) glycoprotein ectodomain in complex with nah1.3 neutralizing antibody fab fragment (local refinement of the distal region)
no
viral protein
2022-02-10
2022-03-09
electron microscopy
3.2
N.A.
N.A.
35239409
10.1126/science.abm5561
0
auth_asym_id
VH:VL
IGHV3
IGKV7
E
F
EVKLEESGGGLVQPGGSMKLSCVASGFSFSYYWMNWVRQSPEKGLEWVAEIRLKSNNYGTHYAESVKGRFTISRDDSKSSVYLQMNNLRPEDTGIYYCTRVITTVFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVN...
DIVLTQSPASLAVSLGQRATISCRASESVHDYGISFMNWFQQKPGQPPKLLIYSASNQGSGVPARFSGSGSGTDFSLNIHPMEEDDIAMYFCQQSKEVPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVKLEESGGGLVQPGGSMKLSCVASGFSFSYYWMNWVRQSPEKGLEWVAEIRLKSNNYGTHYAESVKGRFTISRDDSKSSVYLQMNNLRPEDTGIYYCTRVITTVFAYWGQGTLVTV
IVLTQSPASLAVSLGQRATISCRASESVHDYGISFMNWFQQKPGQPPKLLIYSASNQGSGVPARFSGSGSGTDFSLNIHPMEEDDIAMYFCQQSKEVPYTFGGGTKLEIK
13.500627
13.372741
458
218
117
110
117
110
38
nah1.3 fab heavy chain
nah1.3 fab light chain
mus sp.
mus sp.
A
protein
glycoprotein g
nipah henipavirus
55
23
0.82
HL
train
7txz_H_L
7txz
nipah virus attachment (g) glycoprotein ectodomain in complex with nah1.3 neutralizing antibody fab fragment (local refinement of the distal region)
no
viral protein
2022-02-10
2022-03-09
electron microscopy
3.2
N.A.
N.A.
35239409
10.1126/science.abm5561
0
auth_asym_id
VH:VL
IGHV3
IGKV7
H
L
EVKLEESGGGLVQPGGSMKLSCVASGFSFSYYWMNWVRQSPEKGLEWVAEIRLKSNNYGTHYAESVKGRFTISRDDSKSSVYLQMNNLRPEDTGIYYCTRVITTVFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVN...
DIVLTQSPASLAVSLGQRATISCRASESVHDYGISFMNWFQQKPGQPPKLLIYSASNQGSGVPARFSGSGSGTDFSLNIHPMEEDDIAMYFCQQSKEVPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVKLEESGGGLVQPGGSMKLSCVASGFSFSYYWMNWVRQSPEKGLEWVAEIRLKSNNYGTHYAESVKGRFTISRDDSKSSVYLQMNNLRPEDTGIYYCTRVITTVFAYWGQGTLVTV
DIVLTQSPASLAVSLGQRATISCRASESVHDYGISFMNWFQQKPGQPPKLLIYSASNQGSGVPARFSGSGSGTDFSLNIHPMEEDDIAMYFCQQSKEVPYTFGGGTKLEIK
13.522086
13.47764
458
218
117
111
117
111
38
nah1.3 fab heavy chain
nah1.3 fab light chain
mus sp.
mus sp.
B
protein
glycoprotein g
nipah henipavirus
50
22
0.88
HL
train
7ty0_K_O
7ty0
nipah virus attachment (g) glycoprotein ectodomain in complex with nah1.3 neutralizing antibody fab fragment (local refinement of the stalk region)
no
viral protein
2022-02-10
2022-03-09
electron microscopy
3.5
N.A.
N.A.
35239409
10.1126/science.abm5561
0
auth_asym_id
VH:VL
IGHV3
IGKV7
K
O
EVKLEESGGGLVQPGGSMKLSCVASGFSFSYYWMNWVRQSPEKGLEWVAEIRLKSNNYGTHYAESVKGRFTISRDDSKSSVYLQMNNLRPEDTGIYYCTRVITTVFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVN...
DIVLTQSPASLAVSLGQRATISCRASESVHDYGISFMNWFQQKPGQPPKLLIYSASNQGSGVPARFSGSGSGTDFSLNIHPMEEDDIAMYFCQQSKEVPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
VKLEESGGGLVQPGGSMKLSCVASGFSFSYYWMNWVRQSPEKGLEWVAEIRLKSNNYGTHYAESVKGRFTISRDDSKSSVYLQMNNLRPEDTGIYYCTRVITTVFAYWGQGTLVT
IVLTQSPASLAVSLGQRATISCRASESVHDYGISFMNWFQQKPGQPPKLLIYSASNQGSGVPARFSGSGSGTDFSLNIHPMEEDDIAMYFCQQSKEVPYTFGGGTKLEI
12.586875
13.037207
458
218
99
97
115
109
42
igh protein
nah fab light chain
mus sp.
mus sp.
C
protein
glycoprotein g
nipah henipavirus
47
21
0.91
HL
train
7ty0_J_N
7ty0
nipah virus attachment (g) glycoprotein ectodomain in complex with nah1.3 neutralizing antibody fab fragment (local refinement of the stalk region)
no
viral protein
2022-02-10
2022-03-09
electron microscopy
3.5
N.A.
N.A.
35239409
10.1126/science.abm5561
0
auth_asym_id
VH:VL
IGHV3
IGKV7
J
N
EVKLEESGGGLVQPGGSMKLSCVASGFSFSYYWMNWVRQSPEKGLEWVAEIRLKSNNYGTHYAESVKGRFTISRDDSKSSVYLQMNNLRPEDTGIYYCTRVITTVFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVN...
DIVLTQSPASLAVSLGQRATISCRASESVHDYGISFMNWFQQKPGQPPKLLIYSASNQGSGVPARFSGSGSGTDFSLNIHPMEEDDIAMYFCQQSKEVPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVKLEESGGGLVQPGGSMKLSCVASGFSFSYYWMNWVRQSPEKGLEWVAEIRLKSNNYGTHYAESVKGRFTISRDDSKSSVYLQMNNLRPEDTGIYYCTRVITTVFAYWGQGTLVTV
IVLTQSPASLAVSLGQRATISCRASESVHDYGISFMNWFQQKPGQPPKLLIYSASNQGSGVPARFSGSGSGTDFSLNIHPMEEDDIAMYFCQQSKEVPYTFGGGTKLEI
13.255284
13.306198
458
218
103
105
117
109
35
igh protein
nah fab light chain
mus sp.
mus sp.
D
protein
glycoprotein g
nipah henipavirus
48
22
0.92
HL
train
7wvm_A_B
7wvm
the complex structure of pd-1 and cemiplimab
no
immune system/antitumor protein
2022-02-10
2022-04-20
x-ray diffraction
3.4
0.287
0.247
35309324
10.3389/fimmu.2022.826045
0
auth_asym_id
VH:VL
IGHV3
IGKV1
A
B
EVQLLESGGVLVQPGGSLRLSCAASGFTFSNFGMTWVRQAPGKGLEWVSGISGGGRDTYFADSVKGRFTISRDNSKNTLYLQMNSLKGEDTAVYYCVKWGNIYFDYWGQGTLVTVSS
DIQMTQSPSSLSASVGDSITITCRASLSINTFLNWYQQKPGKAPNLLIYAASSLHGGVPSRFSGSGSGTDFTLTIRTLQPEDFATYYCQQSSNTPFTFGPGTVVDFR
EVQLLESGGVLVQPGGSLRLSCAASGFTFSNFGMTWVRQAPGKGLEWVSGISGGGRDTYFADSVKGRFTISRDNSKNTLYLQMNSLKGEDTAVYYCVKWGNIYFDYWGQGTLVTVSS
DIQMTQSPSSLSASVGDSITITCRASLSINTFLNWYQQKPGKAPNLLIYAASSLHGGVPSRFSGSGSGTDFTLTIRTLQPEDFATYYCQQSSNTPFTFGPGTVVDFR
13.401922
13.193375
117
107
117
107
117
107
40
heavy chain of cemiplimab
light chain of cemiplimab
homo sapiens
homo sapiens
E
protein
programmed cell death protein 1
homo sapiens
41
17
0.81
HL
train
7wvm_C_D
7wvm
the complex structure of pd-1 and cemiplimab
no
immune system/antitumor protein
2022-02-10
2022-04-20
x-ray diffraction
3.4
0.287
0.247
35309324
10.3389/fimmu.2022.826045
0
auth_asym_id
VH:VL
IGHV3
IGKV1
C
D
EVQLLESGGVLVQPGGSLRLSCAASGFTFSNFGMTWVRQAPGKGLEWVSGISGGGRDTYFADSVKGRFTISRDNSKNTLYLQMNSLKGEDTAVYYCVKWGNIYFDYWGQGTLVTVSS
DIQMTQSPSSLSASVGDSITITCRASLSINTFLNWYQQKPGKAPNLLIYAASSLHGGVPSRFSGSGSGTDFTLTIRTLQPEDFATYYCQQSSNTPFTFGPGTVVDFR
EVQLLESGGVLVQPGGSLRLSCAASGFTFSNFGMTWVRQAPGKGLEWVSGISGGGRDTYFADSVKGRFTISRDNSKNTLYLQMNSLKGEDTAVYYCVKWGNIYFDYWGQGTLVTVS
DIQMTQSPSSLSASVGDSITITCRASLSINTFLNWYQQKPGKAPNLLIYAASSLHGGVPSRFSGSGSGTDFTLTIRTLQPEDFATYYCQQSSNTPFTFGPGTVVDFR
13.347369
13.194353
117
107
116
107
116
107
38
heavy chain of cemiplimab
light chain of cemiplimab
homo sapiens
homo sapiens
F
protein
programmed cell death protein 1
homo sapiens
41
18
0.86
HL
train
7r58_H_L
7r58
crystal structure of the gpvi-glenzocimab complex
no
blood clotting
2022-02-10
2022-11-16
x-ray diffraction
1.9
0.232
0.186
36375047
10.1182/bloodadvances.2022007863
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
H
L
QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYNMHWVRQAPGQGLEWMGGIYPGNGDTSYNQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARGTVVGDWYFDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
DIQMTQSPSSLSASVGDRVTITCRSSQSLENSNGNTYLNWYQQKPGKAPKLLIYRVSNRFSGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCLQLTHVPWTFGQGTKVEITRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYNMHWVRQAPGQGLEWMGGIYPGNGDTSYNQKFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARGTVVGDWYFDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
DIQMTQSPSSLSASVGDRVTITCRSSQSLENSNGNTYLNWYQQKPGKAPKLLIYRVSNRFSGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCLQLTHVPWTFGQGTKVEITRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
20.73154
23.952406
227
219
216
218
223
218
95
fab heavy chain
fab light chain
mus musculus
mus musculus
A
protein
platelet glycoprotein vi
homo sapiens
46
21
0.91
HL
train
7wvf_C
7wvf
ectotlr3-mab12-poly(i:c) complex
no
immune system/rna
2022-02-10
2022-11-16
electron microscopy
3.91
N.A.
N.A.
36371424
10.1038/s41467-022-34602-0
0
auth_asym_id
scFv
N.A.
N.A.
C
N.A.
ADPQVQLQQSGPGLVKPSQTLSLTCAISGDSVSSNSAAWGWIRQSPGRGLEWLGIIQKRSKWYNNYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCARYSYPFYSIDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSQSVLTQPPSVSVAPGQTARISCSGDNIGSYYVHWYQQKPGQAPVLVIYEDSERPSGIPERFSGSNSGNTATLTISGTQAEDEADYYCSSYDDPNFQVFGGGTKLTVLGHHHHHHHH
N.A.
QVQLQQSGPGLVKPSQTLSLTCAISGDSVSSNSAAWGWIRQSPGRGLEWLGIIQKRSKWYNNYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCARYSYPFYSIDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSQSVLTQPPSVSVAPGQTARISCSGDNIGSYYVHWYQQKPGQAPVLVIYEDSERPSGIPERFSGSNSGNTATLTISGTQAEDEADYYCSSYDDPNFQVFGGGTKLTVL
N.A.
17.507078
0
261
0
228
0
249
0
0
mab12
N.A.
homo sapiens
N.A.
A
protein
toll-like receptor 3
homo sapiens
37
17
1
H_only
train
7wvl_H_L
7wvl
structure of p4a2 fab in complex with spike-rbd from sars-cov-2
no
viral protein/immune system
2022-02-10
2022-12-07
x-ray diffraction
3
0.279
0.233
36508467
10.1371/journal.ppat.1010994
0
auth_asym_id
FabH:FabL
IGHV1
IGKV7
H
L
QVQLQQSGAELVKPGASVKLSCKASGFTFTRYSIYWMKQRPGQGLEWIGEINPSTGDTNFNEKFKSKATLTVDKSSTTAYMQLSSLTSEDSAVYYCTRSTGYWGQGTLVTVSAAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEP
DIVLTQSPASLAVSLGQRATISCRASESVEYHGTILMQWFQQKPGQPPRLLIYAASNVDSGVPARFSGSGSGTDLSLNIHPVEEDDIAMYFCQQSRKVPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKINGSQRQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCQATHKTSTSPIVKSFNRNAC
QVQLQQSGAELVKPGASVKLSCKASGFTFTRYSIYWMKQRPGQGLEWIGEINPSTGDTNFNEKFKSKATLTVDKSSTTAYMQLSSLTSEDSAVYYCTRSTGYWGQGTLVTVSAAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEP
DIVLTQSPASLAVSLGQRATISCRASESVEYHGTILMQWFQQKPGQPPRLLIYAASNVDSGVPARFSGSGSGTDLSLNIHPVEEDDIAMYFCQQSRKVPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKINGSQRQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCQATHKTSTSPIVKSFNRN
20.717117
23.630663
212
218
212
216
212
216
90
p4a2 fab heavy chain
p4a2 fab light chain
mus musculus
mus musculus
F
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
41
18
0.72
HL
train
7wvd_G_H
7wvd
crystal structure of h14 complexed with sia28
no
virus
2022-02-10
2023-01-18
x-ray diffraction
3.39
0.261
0.221
36494358
10.1038/s41467-022-35236-y
0
auth_asym_id
VH:VL
IGHV3
IGKV1
G
H
QVQLVESGGGVVQPGRSLRLSCAASGFPFSSYGMHWVRQAPGKGLEWVAGVSYDGSYKYYADSVKGRFTISRDSSKSTLYLQMNSLRPEDTAVYYCARPSAIFGIYIILNGLDVWGQGTTVTVS
EIVLTQSPSSVSASVGDRVTITCRATQGISSWLAWYQQKPGKPPKLLIFGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYFCQQAHSFPLTFGGGTKVEIK
QVQLVESGGGVVQPGRSLRLSCAASGFPFSSYGMHWVRQAPGKGLEWVAGVSYDGSYKYYADSVKGRFTISRDSSKSTLYLQMNSLRPEDTAVYYCARPSAIFGIYIILNGLDVWGQGTTVTVS
EIVLTQSPSSVSASVGDRVTITCRATQGISSWLAWYQQKPGKPPKLLIFGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYFCQQAHSFPLTFGGGTKVEIK
13.981458
13.207472
124
107
124
107
124
107
44
heavy chain of sia28
light chain of sia28
homo sapiens
homo sapiens
D
protein
hemagglutinin
influenza a virus
41
20
0.83
HL
train
7wvd_I_J
7wvd
crystal structure of h14 complexed with sia28
no
virus
2022-02-10
2023-01-18
x-ray diffraction
3.39
0.261
0.221
36494358
10.1038/s41467-022-35236-y
0
auth_asym_id
VH:VL
IGHV3
IGKV1
I
J
QVQLVESGGGVVQPGRSLRLSCAASGFPFSSYGMHWVRQAPGKGLEWVAGVSYDGSYKYYADSVKGRFTISRDSSKSTLYLQMNSLRPEDTAVYYCARPSAIFGIYIILNGLDVWGQGTTVTVS
EIVLTQSPSSVSASVGDRVTITCRATQGISSWLAWYQQKPGKPPKLLIFGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYFCQQAHSFPLTFGGGTKVEIK
QVQLVESGGGVVQPGRSLRLSCAASGFPFSSYGMHWVRQAPGKGLEWVAGVSYDGSYKYYADSVKGRFTISRDSSKSTLYLQMNSLRPEDTAVYYCARPSAIFGIYIILNGLDVWGQGTTVTVS
EIVLTQSPSSVSASVGDRVTITCRATQGISSWLAWYQQKPGKPPKLLIFGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYFCQQAHSFPLTFGGGTKVEIK
13.99822
13.208776
124
107
124
107
124
107
45
heavy chain of sia28
light chain of sia28
homo sapiens
homo sapiens
F
protein
hemagglutinin
influenza a virus
42
19
0.76
HL
train
7wvi_A_B
7wvi
crystal structure of sia28
no
virus with monoclonal antibody
2022-02-10
2023-01-18
x-ray diffraction
2.48
0.23
0.195
36494358
10.1038/s41467-022-35236-y
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
A
B
QVQLVESGGGVVQPGRSLRLSCAASGFPFSSYGMHWVRQAPGKGLEWVAGVSYDGSYKYYADSVKGRFTISRDSSKSTLYLQMNSLRPEDTAVYYCARPSAIFGIYIILNGLDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
EIVLTQSPSSVSASVGDRVTITCRATQGISSWLAWYQQKPGKPPKLLIFGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYFCQQAHSFPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVESGGGVVQPGRSLRLSCAASGFPFSSYGMHWVRQAPGKGLEWVAGVSYDGSYKYYADSVKGRFTISRDSSKSTLYLQMNSLRPEDTAVYYCARPSAIFGIYIILNGLDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
EIVLTQSPSSVSASVGDRVTITCRATQGISSWLAWYQQKPGKPPKLLIFGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYFCQQAHSFPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
23.298006
22.909409
226
214
226
214
226
214
95
heavy chain of sia28
light chain of sia28
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7wvi_C_D
7wvi
crystal structure of sia28
no
virus with monoclonal antibody
2022-02-10
2023-01-18
x-ray diffraction
2.48
0.23
0.195
36494358
10.1038/s41467-022-35236-y
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
C
D
QVQLVESGGGVVQPGRSLRLSCAASGFPFSSYGMHWVRQAPGKGLEWVAGVSYDGSYKYYADSVKGRFTISRDSSKSTLYLQMNSLRPEDTAVYYCARPSAIFGIYIILNGLDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
EIVLTQSPSSVSASVGDRVTITCRATQGISSWLAWYQQKPGKPPKLLIFGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYFCQQAHSFPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVESGGGVVQPGRSLRLSCAASGFPFSSYGMHWVRQAPGKGLEWVAGVSYDGSYKYYADSVKGRFTISRDSSKSTLYLQMNSLRPEDTAVYYCARPSAIFGIYIILNGLDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
EIVLTQSPSSVSASVGDRVTITCRATQGISSWLAWYQQKPGKPPKLLIFGASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYFCQQAHSFPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
23.03156
22.922714
226
214
226
214
226
214
95
heavy chain of sia28
light chain of sia28
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7txw_H_L
7txw
crystal structure of the complex of the malaria sexual stage protein and vaccine target pfs25 with the fab fragment of a transmission blocking antibody 1g2
no
immune system
2022-02-10
2023-04-12
x-ray diffraction
2.17
0.23
0.177
37061547
10.1038/s41541-023-00655-5
0
auth_asym_id
FabH:FabL
IGHV1
IGKV2
H
L
QVQLQQSGAELVRPGASVTLSCKASGYTFTDYEMHWVKQTPVHGLEWIGAIDPETGGPAYNQKFKGKAILTTDKSSTTAYMELRSLTSEDSAVYYCARYYYVSSYWGQGTSVTVSSASTKPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCG
DVVMTQTPLSLPVSLGDQASMSCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSKRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPYTFGGGTKLEMKRTDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
QVQLQQSGAELVRPGASVTLSCKASGYTFTDYEMHWVKQTPVHGLEWIGAIDPETGGPAYNQKFKGKAILTTDKSSTTAYMELRSLTSEDSAVYYCARYYYVSSYWGQGTSVTVSSASTKPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRD
DVVMTQTPLSLPVSLGDQASMSCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSKRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPYTFGGGTKLEMKRTDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN
23.115002
23.011137
219
219
217
217
217
217
94
fab fragment of monoclonal antibody 1g2 heavy chain
fab fragment of monoclonal antibody 1g2 light chain
mus musculus
mus musculus
A
protein
ookinete surface protein p25
plasmodium falciparum 3d7
36
18
0.95
HL
train
7tyf_N
7tyf
human amylin1 receptor in complex with gs and rat amylin peptide
yes
membrane protein
2022-02-13
2022-03-23
electron microscopy
2.2
N.A.
N.A.
35324283
10.1126/science.abm9609
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
13.716341
0
138
0
128
0
128
0
0
nanobody 35
N.A.
lama glama
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
45;31
15;11
0.68;0.73
H_only
train
7tyh_N
7tyh
human amylin2 receptor in complex with gs and human calcitonin peptide
yes
membrane protein
2022-02-13
2022-03-23
electron microscopy
3.3
N.A.
N.A.
35324283
10.1126/science.abm9609
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVS
N.A.
13.722749
0
138
0
127
0
127
0
0
nanobody 35
N.A.
lama glama
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
42;34
9;13
0.43;0.72
H_only
train
7tyl_N
7tyl
calcitonin receptor in complex with gs and rat amylin peptide, bypass motif
yes
membrane protein
2022-02-13
2022-03-23
electron microscopy
3.3
N.A.
N.A.
35324283
10.1126/science.abm9609
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
13.870067
0
138
0
128
0
128
0
0
nanobody 35
N.A.
lama glama
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
47;32
15;11
0.6;0.65
H_only
train