PDB_ID_chain stringlengths 6 10 | PDB_ID stringlengths 4 4 | Title stringlengths 4 230 | Mutation(s) stringclasses 2
values | Classification stringclasses 305
values | Deposit_date stringdate 1976-03-17 00:00:00 2026-01-20 00:00:00 | Release_date stringdate 1976-05-19 00:00:00 2026-02-25 00:00:00 | Method stringclasses 5
values | Resolution stringclasses 459
values | R_free stringclasses 227
values | R_work stringclasses 211
values | PMID stringlengths 4 8 | DOI stringlengths 4 68 | Model_index int64 0 76 | Asym_ID_type stringclasses 2
values | Ab_type stringclasses 30
values | H_subgroup stringclasses 8
values | L_subgroup stringclasses 19
values | H_chain_ID stringclasses 60
values | L_chain_ID stringclasses 58
values | H_fas_seq stringlengths 4 919 | L_fas_seq stringlengths 4 627 | H_filled_pdb_seq stringlengths 4 896 | L_filled_pdb_seq stringlengths 4 523 | H_mean_radius float64 0 79.7 | L_mean_radius float64 0 84.3 | H_fas_seq_len int64 0 919 | L_fas_seq_len int64 0 627 | H_pdb_seq_len int64 0 879 | L_pdb_seq_len int64 0 523 | H_filled_seq_len int64 0 896 | L_filled_seq_len int64 0 523 | HL_inf_res_num int64 0 175 | H_mol_name stringlengths 2 331 | L_mol_name stringlengths 2 151 | H_species stringclasses 68
values | L_species stringclasses 42
values | Ag_chain_ID(s) stringclasses 279
values | Ag_type(s) stringclasses 16
values | Ag_mol_name(s) stringlengths 2 390 | Ag_species stringclasses 743
values | Ab_ag_inf_res_num stringlengths 1 11 | CDR_inf_res_num stringclasses 444
values | CDR_inf_res_ratio stringlengths 1 19 | hl_label stringclasses 3
values | split stringclasses 1
value |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
7wg3_H_D | 7wg3 | structural basis of interleukin-17b receptor in complex with a neutralizing antibody d9 for guiding humanization and affinity maturation for cancer therapy | no | immune system | 2021-12-28 | 2022-11-09 | x-ray diffraction | 2.19 | 0.238 | 0.193 | 36288706 | 10.1016/j.celrep.2022.111555 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV6 | H | D | EVQLQQSGPELVKPGASVKISCKTSGYTFTEYTIHWVKQNHGKSLDWIGGINPNNGGTTYNQEFKGKATLTVDKSSSTAYMEFRSLTSEDSAVYYCARSYYGYVDYWGQGTTLTAAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSCD | QIVLTQSPAIMSASPGEKVTMTCSASSSIYYIHWYQQKSGTSPKRWIYDTSKLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCQQWSSNPFTFGSGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLQQSGPELVKPGASVKISCKTSGYTFTEYTIHWVKQNHGKSLDWIGGINPNNGGTTYNQEFKGKATLTVDKSSSTAYMEFRSLTSEDSAVYYCARSYYGYVDYWGQGTTLTAAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSCD | QIVLTQSPAIMSASPGEKVTMTCSASSSIYYIHWYQQKSGTSPKRWIYDTSKLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCQQWSSNPFTFGSGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.458353 | 23.206152 | 220 | 213 | 220 | 213 | 220 | 213 | 106 | heavy chain of d9 fab | light chain of d9 fab | mus musculus | mus musculus | L | protein | il17rb protein | bos taurus | 44 | 20 | 0.77 | HL | train |
7whi_F | 7whi | the state 2 complex structure of omicron spike with bn03 (2-up rbd, 4 nanobodies) | yes | viral protein | 2021-12-30 | 2022-05-11 | electron microscopy | 2.93 | N.A. | N.A. | 35344711 | 10.1016/j.cell.2022.03.009 | 0 | auth_asym_id | VH | IGHV3 | N.A. | F | N.A. | EVQLVESGGGLVQPGGSLRLSCAASDSSFYDYEMSWVRQVPGKTPEWIGSMYPSGRTYINPSLKSLVTISRDNSENMLYLQMNSLRAEDTAMYYCVSNWASGSTGDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGS | N.A. | EVQLVESGGGLVQPGGSLRLSCAASDSSFYDYEMSWVRQVPGKTPEWIGSMYPSGRTYINPSLKSLVTISRDNSENMLYLQMNSLRAEDTAMYYCVSNWASGSTGDYWGQGTLVTV | N.A. | 13.686289 | 0 | 138 | 0 | 116 | 0 | 116 | 0 | 0 | bn03_nano1 | N.A. | homo sapiens | N.A. | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 49 | 9 | 0.41 | H_only | train |
7whi_G | 7whi | the state 2 complex structure of omicron spike with bn03 (2-up rbd, 4 nanobodies) | yes | viral protein | 2021-12-30 | 2022-05-11 | electron microscopy | 2.93 | N.A. | N.A. | 35344711 | 10.1016/j.cell.2022.03.009 | 0 | auth_asym_id | VH | IGHV3 | N.A. | G | N.A. | EVQLVESGGGLVQPGGSLRLSCAASDFYFDYYEMSWVRQAPGQGLEWVSTISGLGGATYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTALYYCATRSPFGDYAFSYWGQGTLVTVSS | N.A. | EVQLVESGGGLVQPGGSLRLSCAASDFYFDYYEMSWVRQAPGQGLEWVSTISGLGGATYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTALYYCATRSPFGDYAFSYWGQGTLVTVS | N.A. | 13.833077 | 0 | 120 | 0 | 119 | 0 | 119 | 0 | 0 | bn03_nano2 | N.A. | homo sapiens | N.A. | A;B | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 47;31 | 15;8 | 0.6;0.5 | H_only | train |
7whi_D | 7whi | the state 2 complex structure of omicron spike with bn03 (2-up rbd, 4 nanobodies) | yes | viral protein | 2021-12-30 | 2022-05-11 | electron microscopy | 2.93 | N.A. | N.A. | 35344711 | 10.1016/j.cell.2022.03.009 | 0 | auth_asym_id | VH | IGHV3 | N.A. | D | N.A. | EVQLVESGGGLVQPGGSLRLSCAASDSSFYDYEMSWVRQVPGKTPEWIGSMYPSGRTYINPSLKSLVTISRDNSENMLYLQMNSLRAEDTAMYYCVSNWASGSTGDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGS | N.A. | EVQLVESGGGLVQPGGSLRLSCAASDSSFYDYEMSWVRQVPGKTPEWIGSMYPSGRTYINPSLKSLVTISRDNSENMLYLQMNSLRAEDTAMYYCVSNWASGSTGDYWGQGTLVTVS | N.A. | 13.71259 | 0 | 138 | 0 | 117 | 0 | 117 | 0 | 0 | bn03_nano1 | N.A. | homo sapiens | N.A. | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 51 | 10 | 0.45 | H_only | train |
7whi_E | 7whi | the state 2 complex structure of omicron spike with bn03 (2-up rbd, 4 nanobodies) | yes | viral protein | 2021-12-30 | 2022-05-11 | electron microscopy | 2.93 | N.A. | N.A. | 35344711 | 10.1016/j.cell.2022.03.009 | 0 | auth_asym_id | VH | IGHV3 | N.A. | E | N.A. | EVQLVESGGGLVQPGGSLRLSCAASDSSFYDYEMSWVRQVPGKTPEWIGSMYPSGRTYINPSLKSLVTISRDNSENMLYLQMNSLRAEDTAMYYCVSNWASGSTGDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGS | N.A. | EVQLVESGGGLVQPGGSLRLSCAASDSSFYDYEMSWVRQVPGKTPEWIGSMYPSGRTYINPSLKSLVTISRDNSENMLYLQMNSLRAEDTAMYYCVSNWASGSTGDYWGQGTLVTV | N.A. | 13.671374 | 0 | 138 | 0 | 116 | 0 | 116 | 0 | 0 | bn03_nano1 | N.A. | homo sapiens | N.A. | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 52 | 10 | 0.5 | H_only | train |
7whj_E | 7whj | the state 1 complex structure of omicron spike with bn03 (1-up rbd, 3 nanobodies) | yes | viral protein | 2021-12-30 | 2022-05-11 | electron microscopy | 3.27 | N.A. | N.A. | 35344711 | 10.1016/j.cell.2022.03.009 | 0 | auth_asym_id | VH | IGHV3 | N.A. | E | N.A. | EVQLVESGGGLVQPGGSLRLSCAASDSSFYDYEMSWVRQVPGKTPEWIGSMYPSGRTYINPSLKSLVTISRDNSENMLYLQMNSLRAEDTAMYYCVSNWASGSTGDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGS | N.A. | EVQLVESGGGLVQPGGSLRLSCAASDSSFYDYEMSWVRQVPGKTPEWIGSMYPSGRTYINPSLKSLVTISRDNSENMLYLQMNSLRAEDTAMYYCVSNWASGSTGDYWGQGTLVTVSS | N.A. | 13.947034 | 0 | 138 | 0 | 118 | 0 | 118 | 0 | 0 | bn03_nano1 | N.A. | homo sapiens | N.A. | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 45 | 11 | 0.52 | H_only | train |
7whj_F | 7whj | the state 1 complex structure of omicron spike with bn03 (1-up rbd, 3 nanobodies) | yes | viral protein | 2021-12-30 | 2022-05-11 | electron microscopy | 3.27 | N.A. | N.A. | 35344711 | 10.1016/j.cell.2022.03.009 | 0 | auth_asym_id | VH | IGHV3 | N.A. | F | N.A. | EVQLVESGGGLVQPGGSLRLSCAASDFYFDYYEMSWVRQAPGQGLEWVSTISGLGGATYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTALYYCATRSPFGDYAFSYWGQGTLVTVSS | N.A. | EVQLVESGGGLVQPGGSLRLSCAASDFYFDYYEMSWVRQAPGQGLEWVSTISGLGGATYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTALYYCATRSPFGDYAFSYWGQGTLVTVS | N.A. | 13.907166 | 0 | 120 | 0 | 119 | 0 | 119 | 0 | 0 | bn03_nano2 | N.A. | homo sapiens | N.A. | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 38 | 14 | 0.78 | H_only | train |
7whj_D | 7whj | the state 1 complex structure of omicron spike with bn03 (1-up rbd, 3 nanobodies) | yes | viral protein | 2021-12-30 | 2022-05-11 | electron microscopy | 3.27 | N.A. | N.A. | 35344711 | 10.1016/j.cell.2022.03.009 | 0 | auth_asym_id | VH | IGHV3 | N.A. | D | N.A. | EVQLVESGGGLVQPGGSLRLSCAASDSSFYDYEMSWVRQVPGKTPEWIGSMYPSGRTYINPSLKSLVTISRDNSENMLYLQMNSLRAEDTAMYYCVSNWASGSTGDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGS | N.A. | EVQLVESGGGLVQPGGSLRLSCAASDSSFYDYEMSWVRQVPGKTPEWIGSMYPSGRTYINPSLKSLVTISRDNSENMLYLQMNSLRAEDTAMYYCVSNWASGSTGDYWGQGTLVTVSS | N.A. | 13.965629 | 0 | 138 | 0 | 118 | 0 | 118 | 0 | 0 | bn03_nano1 | N.A. | homo sapiens | N.A. | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 49 | 11 | 0.46 | H_only | train |
7whk_G | 7whk | the state 3 complex structure of omicron spike with bn03 (2-up rbd, 5 nanobodies) | yes | viral protein | 2021-12-30 | 2022-05-11 | electron microscopy | 3.01 | N.A. | N.A. | 35344711 | 10.1016/j.cell.2022.03.009 | 0 | auth_asym_id | VH | IGHV3 | N.A. | G | N.A. | EVQLVESGGGLVQPGGSLRLSCAASDSSFYDYEMSWVRQVPGKTPEWIGSMYPSGRTYINPSLKSLVTISRDNSENMLYLQMNSLRAEDTAMYYCVSNWASGSTGDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGS | N.A. | EVQLVESGGGLVQPGGSLRLSCAASDSSFYDYEMSWVRQVPGKTPEWIGSMYPSGRTYINPSLKSLVTISRDNSENMLYLQMNSLRAEDTAMYYCVSNWASGSTGDYWGQGTLVTV | N.A. | 13.63415 | 0 | 138 | 0 | 116 | 0 | 116 | 0 | 0 | bn03_nano1 | N.A. | homo sapiens | N.A. | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 45 | 10 | 0.5 | H_only | train |
7whk_H | 7whk | the state 3 complex structure of omicron spike with bn03 (2-up rbd, 5 nanobodies) | yes | viral protein | 2021-12-30 | 2022-05-11 | electron microscopy | 3.01 | N.A. | N.A. | 35344711 | 10.1016/j.cell.2022.03.009 | 0 | auth_asym_id | VH | IGHV3 | N.A. | H | N.A. | EVQLVESGGGLVQPGGSLRLSCAASDFYFDYYEMSWVRQAPGQGLEWVSTISGLGGATYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTALYYCATRSPFGDYAFSYWGQGTLVTVSS | N.A. | EVQLVESGGGLVQPGGSLRLSCAASDFYFDYYEMSWVRQAPGQGLEWVSTISGLGGATYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTALYYCATRSPFGDYAFSYWGQGTLVTVS | N.A. | 13.858956 | 0 | 120 | 0 | 119 | 0 | 119 | 0 | 0 | bn03_nano2 | N.A. | homo sapiens | N.A. | A;B | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 42;25 | 16;6 | 0.73;0.46 | H_only | train |
7whk_E | 7whk | the state 3 complex structure of omicron spike with bn03 (2-up rbd, 5 nanobodies) | yes | viral protein | 2021-12-30 | 2022-05-11 | electron microscopy | 3.01 | N.A. | N.A. | 35344711 | 10.1016/j.cell.2022.03.009 | 0 | auth_asym_id | VH | IGHV3 | N.A. | E | N.A. | EVQLVESGGGLVQPGGSLRLSCAASDSSFYDYEMSWVRQVPGKTPEWIGSMYPSGRTYINPSLKSLVTISRDNSENMLYLQMNSLRAEDTAMYYCVSNWASGSTGDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGS | N.A. | EVQLVESGGGLVQPGGSLRLSCAASDSSFYDYEMSWVRQVPGKTPEWIGSMYPSGRTYINPSLKSLVTISRDNSENMLYLQMNSLRAEDTAMYYCVSNWASGSTGDYWGQGTLVTVS | N.A. | 13.727333 | 0 | 138 | 0 | 117 | 0 | 117 | 0 | 0 | bn03_nano1 | N.A. | homo sapiens | N.A. | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 45 | 10 | 0.53 | H_only | train |
7whk_D | 7whk | the state 3 complex structure of omicron spike with bn03 (2-up rbd, 5 nanobodies) | yes | viral protein | 2021-12-30 | 2022-05-11 | electron microscopy | 3.01 | N.A. | N.A. | 35344711 | 10.1016/j.cell.2022.03.009 | 0 | auth_asym_id | VH | IGHV3 | N.A. | D | N.A. | EVQLVESGGGLVQPGGSLRLSCAASDFYFDYYEMSWVRQAPGQGLEWVSTISGLGGATYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTALYYCATRSPFGDYAFSYWGQGTLVTVSS | N.A. | EVQLVESGGGLVQPGGSLRLSCAASDFYFDYYEMSWVRQAPGQGLEWVSTISGLGGATYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTALYYCATRSPFGDYAFSYWGQGTLVTVS | N.A. | 13.922361 | 0 | 120 | 0 | 119 | 0 | 119 | 0 | 0 | bn03_nano2 | N.A. | homo sapiens | N.A. | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 42 | 16 | 0.73 | H_only | train |
7whk_F | 7whk | the state 3 complex structure of omicron spike with bn03 (2-up rbd, 5 nanobodies) | yes | viral protein | 2021-12-30 | 2022-05-11 | electron microscopy | 3.01 | N.A. | N.A. | 35344711 | 10.1016/j.cell.2022.03.009 | 0 | auth_asym_id | VH | IGHV3 | N.A. | F | N.A. | EVQLVESGGGLVQPGGSLRLSCAASDSSFYDYEMSWVRQVPGKTPEWIGSMYPSGRTYINPSLKSLVTISRDNSENMLYLQMNSLRAEDTAMYYCVSNWASGSTGDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGS | N.A. | EVQLVESGGGLVQPGGSLRLSCAASDSSFYDYEMSWVRQVPGKTPEWIGSMYPSGRTYINPSLKSLVTISRDNSENMLYLQMNSLRAEDTAMYYCVSNWASGSTGDYWGQGTLVTV | N.A. | 13.643855 | 0 | 138 | 0 | 116 | 0 | 116 | 0 | 0 | bn03_nano1 | N.A. | homo sapiens | N.A. | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 47 | 12 | 0.52 | H_only | train |
7td8_H_L | 7td8 | integrin alpha iib beta3 complex with tirofiban | no | blood clotting | 2021-12-30 | 2022-08-17 | x-ray diffraction | 2.6 | 0.21 | 0.181 | 36113427 | 10.1016/j.cell.2022.08.008 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR | DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR | DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | 22.88775 | 22.875423 | 216 | 214 | 216 | 214 | 216 | 214 | 106 | fab heavy chain | fab light chain | mus musculus | mus musculus | A | protein | integrin alpha-iib | homo sapiens | 48 | 21 | 0.81 | HL | train |
7td8_E_F | 7td8 | integrin alpha iib beta3 complex with tirofiban | no | blood clotting | 2021-12-30 | 2022-08-17 | x-ray diffraction | 2.6 | 0.21 | 0.181 | 36113427 | 10.1016/j.cell.2022.08.008 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | E | F | EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR | DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR | DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | 22.930838 | 22.907818 | 216 | 214 | 214 | 214 | 216 | 214 | 103 | fab heavy chain | fab light chain | mus musculus | mus musculus | C | protein | integrin alpha-iib | homo sapiens | 46 | 21 | 0.88 | HL | train |
7wh8_B_A | 7wh8 | sars-cov-2 spike in complex with the zb8 neutralizing antibody fab (focused refinement on fab-rbd) | no | immune system/viral protein | 2021-12-30 | 2023-01-18 | electron microscopy | 3.11 | N.A. | N.A. | 37542391 | 10.1080/22221751.2023.2245921 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | B | A | EVQLVQSGAEVKKPGSSVKVSCKASGGTFSNYGISWVRQAPGQGLEWMGRILPTFGTANSAQKFQGRVTITADESTGTAYMELRSLRSEDTAVYYCAKEGLAFLGYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFIGSGSGTDFTLTISSLEPEDFAVYFCQQRSNWPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGAEVKKPGSSVKVSCKASGGTFSNYGISWVRQAPGQGLEWMGRILPTFGTANSAQKFQGRVTITADESTGTAYMELRSLRSEDTAVYYCAKEGLAFLGYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFIGSGSGTDFTLTISSLEPEDFAVYFCQQRSNWPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.962395 | 23.089487 | 224 | 214 | 224 | 214 | 224 | 214 | 104 | antibody zb8 heavy chain | antibody zb8 light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 51 | 19 | 0.76 | HL | train |
7whb_D_E | 7whb | sars-cov-2 spike in complex with the zb8 neutralizing antibody fab (3u) | yes | viral protein/immune system | 2021-12-30 | 2023-01-18 | electron microscopy | 2.67 | N.A. | N.A. | 37542391 | 10.1080/22221751.2023.2245921 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | D | E | EVQLVQSGAEVKKPGSSVKVSCKASGGTFSNYGISWVRQAPGQGLEWMGRILPTFGTANSAQKFQGRVTITADESTGTAYMELRSLRSEDTAVYYCAKEGLAFLGYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFIGSGSGTDFTLTISSLEPEDFAVYFCQQRSNWPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGAEVKKPGSSVKVSCKASGGTFSNYGISWVRQAPGQGLEWMGRILPTFGTANSAQKFQGRVTITADESTGTAYMELRSLRSEDTAVYYCAKEGLAFLGYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFIGSGSGTDFTLTISSLEPEDFAVYFCQQRSNWPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.979456 | 23.123205 | 224 | 214 | 224 | 214 | 224 | 214 | 100 | antibody zb8 heavy chain | antibody zb8 light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 50 | 19 | 0.83 | HL | train |
7whb_J_K | 7whb | sars-cov-2 spike in complex with the zb8 neutralizing antibody fab (3u) | yes | viral protein/immune system | 2021-12-30 | 2023-01-18 | electron microscopy | 2.67 | N.A. | N.A. | 37542391 | 10.1080/22221751.2023.2245921 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | J | K | EVQLVQSGAEVKKPGSSVKVSCKASGGTFSNYGISWVRQAPGQGLEWMGRILPTFGTANSAQKFQGRVTITADESTGTAYMELRSLRSEDTAVYYCAKEGLAFLGYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFIGSGSGTDFTLTISSLEPEDFAVYFCQQRSNWPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGAEVKKPGSSVKVSCKASGGTFSNYGISWVRQAPGQGLEWMGRILPTFGTANSAQKFQGRVTITADESTGTAYMELRSLRSEDTAVYYCAKEGLAFLGYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFIGSGSGTDFTLTISSLEPEDFAVYFCQQRSNWPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.992899 | 23.128342 | 224 | 214 | 224 | 214 | 224 | 214 | 103 | antibody zb8 heavy chain | antibody zb8 light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 52 | 19 | 0.79 | HL | train |
7whb_G_H | 7whb | sars-cov-2 spike in complex with the zb8 neutralizing antibody fab (3u) | yes | viral protein/immune system | 2021-12-30 | 2023-01-18 | electron microscopy | 2.67 | N.A. | N.A. | 37542391 | 10.1080/22221751.2023.2245921 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | G | H | EVQLVQSGAEVKKPGSSVKVSCKASGGTFSNYGISWVRQAPGQGLEWMGRILPTFGTANSAQKFQGRVTITADESTGTAYMELRSLRSEDTAVYYCAKEGLAFLGYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFIGSGSGTDFTLTISSLEPEDFAVYFCQQRSNWPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGAEVKKPGSSVKVSCKASGGTFSNYGISWVRQAPGQGLEWMGRILPTFGTANSAQKFQGRVTITADESTGTAYMELRSLRSEDTAVYYCAKEGLAFLGYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFIGSGSGTDFTLTISSLEPEDFAVYFCQQRSNWPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.986946 | 23.129826 | 224 | 214 | 224 | 214 | 224 | 214 | 105 | antibody zb8 heavy chain | antibody zb8 light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 49 | 19 | 0.83 | HL | train |
7whd_G_H | 7whd | sars-cov-2 spike in complex with the zb8 neutralizing antibody fab (2u1d) | yes | viral protein/immune system | 2021-12-30 | 2023-01-18 | electron microscopy | 2.65 | N.A. | N.A. | 37542391 | 10.1080/22221751.2023.2245921 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | G | H | EVQLVQSGAEVKKPGSSVKVSCKASGGTFSNYGISWVRQAPGQGLEWMGRILPTFGTANSAQKFQGRVTITADESTGTAYMELRSLRSEDTAVYYCAKEGLAFLGYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFIGSGSGTDFTLTISSLEPEDFAVYFCQQRSNWPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGAEVKKPGSSVKVSCKASGGTFSNYGISWVRQAPGQGLEWMGRILPTFGTANSAQKFQGRVTITADESTGTAYMELRSLRSEDTAVYYCAKEGLAFLGYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFIGSGSGTDFTLTISSLEPEDFAVYFCQQRSNWPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.961578 | 23.129229 | 224 | 214 | 224 | 214 | 224 | 214 | 104 | antibody zb8 heavy chain | antibody zb8 light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 49 | 18 | 0.78 | HL | train |
7whd_J_K | 7whd | sars-cov-2 spike in complex with the zb8 neutralizing antibody fab (2u1d) | yes | viral protein/immune system | 2021-12-30 | 2023-01-18 | electron microscopy | 2.65 | N.A. | N.A. | 37542391 | 10.1080/22221751.2023.2245921 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | J | K | EVQLVQSGAEVKKPGSSVKVSCKASGGTFSNYGISWVRQAPGQGLEWMGRILPTFGTANSAQKFQGRVTITADESTGTAYMELRSLRSEDTAVYYCAKEGLAFLGYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFIGSGSGTDFTLTISSLEPEDFAVYFCQQRSNWPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGAEVKKPGSSVKVSCKASGGTFSNYGISWVRQAPGQGLEWMGRILPTFGTANSAQKFQGRVTITADESTGTAYMELRSLRSEDTAVYYCAKEGLAFLGYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFIGSGSGTDFTLTISSLEPEDFAVYFCQQRSNWPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.883966 | 23.127573 | 224 | 214 | 224 | 214 | 224 | 214 | 100 | antibody zb8 heavy chain | antibody zb8 light chain | homo sapiens | homo sapiens | B;C | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 51;18 | 18;5 | 0.78;0.56 | HL | train |
7whd_D_E | 7whd | sars-cov-2 spike in complex with the zb8 neutralizing antibody fab (2u1d) | yes | viral protein/immune system | 2021-12-30 | 2023-01-18 | electron microscopy | 2.65 | N.A. | N.A. | 37542391 | 10.1080/22221751.2023.2245921 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | D | E | EVQLVQSGAEVKKPGSSVKVSCKASGGTFSNYGISWVRQAPGQGLEWMGRILPTFGTANSAQKFQGRVTITADESTGTAYMELRSLRSEDTAVYYCAKEGLAFLGYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFIGSGSGTDFTLTISSLEPEDFAVYFCQQRSNWPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGAEVKKPGSSVKVSCKASGGTFSNYGISWVRQAPGQGLEWMGRILPTFGTANSAQKFQGRVTITADESTGTAYMELRSLRSEDTAVYYCAKEGLAFLGYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFIGSGSGTDFTLTISSLEPEDFAVYFCQQRSNWPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.974613 | 23.135921 | 224 | 214 | 224 | 214 | 224 | 214 | 100 | antibody zb8 heavy chain | antibody zb8 light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 48 | 18 | 0.82 | HL | train |
7tdm_H_L | 7tdm | cryoem structure of sfab cop-2 complex with human claudin-4 and clostridium perfringens enterotoxin c-terminal domain | no | membrane protein | 2022-01-01 | 2022-02-09 | electron microscopy | 6.9 | N.A. | N.A. | 35952760 | 10.1016/j.jbc.2022.102357 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASISSYSGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYWSWYNSSHYIYSALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYEWAPVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASISSYSGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARYWSWYNSSHYIYSALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYEWAPVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 24.071487 | 23.428396 | 237 | 216 | 226 | 214 | 226 | 214 | 93 | cop-2 fab heavy chain | cop-2 fab light chain | homo sapiens | homo sapiens | B | protein | heat-labile enterotoxin b chain | clostridium perfringens | 56 | 24 | 0.89 | HL | train |
7whz_B_D | 7whz | sars-cov-2 spike protein in complex with three human neutralizing antibodies | no | viral protein | 2022-01-01 | 2022-06-22 | electron microscopy | 3.42 | N.A. | N.A. | 35594869 | 10.1016/j.celrep.2022.110862 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | B | D | EVQLVESGGGVVQPGRSLRLSCAASGFTFRTYAMHWVRQAPGKGLEWVAVMWNDGSNKYYADSVKGRFTISRDNSKNTLYLEMNSLRAEDTAVYYCAREGVAAAGSSSDAFDIWGQGTMVTVSS | DIQMTQSPSSLSASVGDRVTITCRASQSISNFLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTLYSFGQGTKLEIK | EVQLVESGGGVVQPGRSLRLSCAASGFTFRTYAMHWVRQAPGKGLEWVAVMWNDGSNKYYADSVKGRFTISRDNSKNTLYLEMNSLRAEDTAVYYCAREGVAAAGSSSDAFDIWGQGTMVTVSS | DIQMTQSPSSLSASVGDRVTITCRASQSISNFLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTLYSFGQGTKLEIK | 13.957067 | 13.245613 | 124 | 107 | 124 | 107 | 124 | 107 | 48 | xma04 heavy chain variable domain | igl c4029_light_igkv1-39_igkj2 | homo sapiens | homo sapiens | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 62 | 23 | 0.74 | HL | train |
7whz_C_E | 7whz | sars-cov-2 spike protein in complex with three human neutralizing antibodies | no | viral protein | 2022-01-01 | 2022-06-22 | electron microscopy | 3.42 | N.A. | N.A. | 35594869 | 10.1016/j.celrep.2022.110862 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | C | E | EVQLVESGGGLVQPGGSLRLSCSASGFTFSSYAMHWVRQAPGKGLEYVSSISSNGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLRVEDAAVYYCVKHYQQQLLWGGPDVWGQGTTVTVSS | DIQMTQSPVSLSASVGDRVTITCRASQSISTWLAWYQQKPGKAPKLLIYETSSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQFNSYPWTFGQGTKVEIK | EVQLVESGGGLVQPGGSLRLSCSASGFTFSSYAMHWVRQAPGKGLEYVSSISSNGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLRVEDAAVYYCVKHYQQQLLWGGPDVWGQGTTVTVSS | DIQMTQSPVSLSASVGDRVTITCRASQSISTWLAWYQQKPGKAPKLLIYETSSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQFNSYPWTFGQGTKVEIK | 13.971707 | 13.287891 | 122 | 107 | 122 | 107 | 122 | 107 | 47 | xma01 heavy chain variable domain | ig c934_light_igkv1-5_igkj1 | homo sapiens | homo sapiens | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 27 | 11 | 0.85 | HL | train |
7whz_H_L | 7whz | sars-cov-2 spike protein in complex with three human neutralizing antibodies | no | viral protein | 2022-01-01 | 2022-06-22 | electron microscopy | 3.42 | N.A. | N.A. | 35594869 | 10.1016/j.celrep.2022.110862 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV1 | H | L | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSFAISWVRQAPGQGLEWMGGIIPIYGTANYAQKFQGRVTITADESTSTAYMDLSSLRSEDTAVYYCARDGSSTYYPHNWFDPWGQGTLVTVSS | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGSGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGVFGTGTKVTVL | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSFAISWVRQAPGQGLEWMGGIIPIYGTANYAQKFQGRVTITADESTSTAYMDLSSLRSEDTAVYYCARDGSSTYYPHNWFDPWGQGTLVTVSS | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGSGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGVFGTGTKVTVL | 13.874342 | 13.292271 | 123 | 110 | 123 | 110 | 123 | 110 | 45 | xma09 heavy chain variable domain | ig c1437_light_iglv1-40_iglj1 | homo sapiens | homo sapiens | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 46 | 20 | 0.87 | HL | train |
7wi0_B_D | 7wi0 | sars-cov-2 omicron variant spike in complex with three human neutralizing antibodies | yes | viral protein | 2022-01-01 | 2022-06-22 | electron microscopy | 3.82 | N.A. | N.A. | 35594869 | 10.1016/j.celrep.2022.110862 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | B | D | EVQLVESGGGVVQPGRSLRLSCAASGFTFRTYAMHWVRQAPGKGLEWVAVMWNDGSNKYYADSVKGRFTISRDNSKNTLYLEMNSLRAEDTAVYYCAREGVAAAGSSSDAFDIWGQGTMVTVSS | DIQMTQSPSSLSASVGDRVTITCRASQSISNFLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTLYSFGQGTKLEIK | VQLVESGGGVVQPGRSLRLSCAASGFTFRTYAMHWVRQAPGKGLEWVAVMWNDGSNKYYADSVKGRFTISRDNSKNTLYLEMNSLRAEDTAVYYCAREGVAAAGSSSDAFDIWGQGTMVTVSS | DIQMTQSPSSLSASVGDRVTITCRASQSISNFLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTLYSFGQGTKLEIK | 14.017718 | 13.364413 | 124 | 107 | 123 | 107 | 123 | 107 | 44 | xma04 heavy chain variable domain | igl c4029_light_igkv1-39_igkj2 | homo sapiens | homo sapiens | A | protein | spike protein s1 | homo sapiens | 64 | 25 | 0.74 | HL | train |
7wi0_C_E | 7wi0 | sars-cov-2 omicron variant spike in complex with three human neutralizing antibodies | yes | viral protein | 2022-01-01 | 2022-06-22 | electron microscopy | 3.82 | N.A. | N.A. | 35594869 | 10.1016/j.celrep.2022.110862 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | C | E | EVQLVESGGGLVQPGGSLRLSCSASGFTFSSYAMHWVRQAPGKGLEYVSSISSNGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLRVEDAAVYYCVKHYQQQLLWGGPDVWGQGTTVTVSS | DIQMTQSPVSLSASVGDRVTITCRASQSISTWLAWYQQKPGKAPKLLIYETSSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQFNSYPWTFGQGTKVEIK | EVQLVESGGGLVQPGGSLRLSCSASGFTFSSYAMHWVRQAPGKGLEYVSSISSNGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLRVEDAAVYYCVKHYQQQLLWGGPDVWGQGTTVTVSS | DIQMTQSPVSLSASVGDRVTITCRASQSISTWLAWYQQKPGKAPKLLIYETSSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQFNSYPWTFGQGTKVEIK | 13.997397 | 13.415575 | 122 | 107 | 122 | 107 | 122 | 107 | 44 | xma01 heavy chain variable domain | ig c934_light_igkv1-5_igkj1 | homo sapiens | homo sapiens | A | protein | spike protein s1 | homo sapiens | 28 | 16 | 0.89 | HL | train |
7wi0_H_L | 7wi0 | sars-cov-2 omicron variant spike in complex with three human neutralizing antibodies | yes | viral protein | 2022-01-01 | 2022-06-22 | electron microscopy | 3.82 | N.A. | N.A. | 35594869 | 10.1016/j.celrep.2022.110862 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV1 | H | L | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSFAISWVRQAPGQGLEWMGGIIPIYGTANYAQKFQGRVTITADESTSTAYMDLSSLRSEDTAVYYCARDGSSTYYPHNWFDPWGQGTLVTVSS | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGSGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGVFGTGTKVTVL | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSFAISWVRQAPGQGLEWMGGIIPIYGTANYAQKFQGRVTITADESTSTAYMDLSSLRSEDTAVYYCARDGSSTYYPHNWFDPWGQGTLVTVSS | QSVLTQPPSVSGAPGQRVTISCTGSSSNIGSGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGVFGTGTKVTVL | 13.984992 | 13.419004 | 123 | 110 | 123 | 110 | 123 | 110 | 48 | xma09 heavy chain variable domain | ig c1437_light_iglv1-40_iglj1 | homo sapiens | homo sapiens | A | protein | spike protein s1 | homo sapiens | 46 | 18 | 0.78 | HL | train |
7te1_H_L | 7te1 | sars-cov-2 receptor binding domain in complex with ab17 | no | immune system/viral protein | 2022-01-03 | 2022-03-30 | x-ray diffraction | 3.5 | 0.344 | 0.296 | 35303475 | 10.1016/j.celrep.2022.110561 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | EVQLQQSGPELVKPGASVKISCKASGYSFTDYYMNWVKQSPEKSLEWIGEINPNTGGTTYNQKFKAKATLTVDKSSSTAYMQLKSLTSEDSAVYYCARYYGNLYAMDYWGQGTSVTVSSGAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFKGLIYHGTNLEDGVPSRFSGSGSGADYSLTISSLESEDFADYYCVQYVQFPYTLGGGTKLEIKRADGAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | VQLQQSGPELVKPGASVKISCKASGYSFTDYYMNWVKQSPEKSLEWIGEINPNTGGTTYNQKFKAKATLTVDKSSSTAYMQLKSLTSEDSAVYYCARYYGNLYAMDYWGQGTSVTVSSGAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRD | DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFKGLIYHGTNLEDGVPSRFSGSGSGADYSLTISSLESEDFADYYCVQYVQFPYTLGGGTKLEIKRADGAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVK | 22.935242 | 22.606833 | 223 | 214 | 206 | 196 | 221 | 207 | 96 | ab17 heavy chain | ab17 light chain | homo sapiens | homo sapiens | D | protein | spike protein s1 | homo sapiens | 53 | 21 | 0.84 | HL | train |
7te1_C_F | 7te1 | sars-cov-2 receptor binding domain in complex with ab17 | no | immune system/viral protein | 2022-01-03 | 2022-03-30 | x-ray diffraction | 3.5 | 0.344 | 0.296 | 35303475 | 10.1016/j.celrep.2022.110561 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | C | F | EVQLQQSGPELVKPGASVKISCKASGYSFTDYYMNWVKQSPEKSLEWIGEINPNTGGTTYNQKFKAKATLTVDKSSSTAYMQLKSLTSEDSAVYYCARYYGNLYAMDYWGQGTSVTVSSGAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFKGLIYHGTNLEDGVPSRFSGSGSGADYSLTISSLESEDFADYYCVQYVQFPYTLGGGTKLEIKRADGAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | LQQSGPELVKPGASVKISCKASGYSFTDYYMNWVKQSPEKSLEWIGEINPNTGGTTYNQKFKAKATLTVDKSSSTAYMQLKSLTSEDSAVYYCARYYGNLYAMDYWGQGTSVTVSSGAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP | DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFKGLIYHGTNLEDGVPSRFSGSGSGADYSLTISSLESEDFADYYCVQYVQFPYTLGGGTKLEIKRADGAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFN | 22.536966 | 23.272898 | 223 | 214 | 209 | 210 | 217 | 210 | 98 | ab17 heavy chain | ab17 light chain | homo sapiens | homo sapiens | E | protein | spike protein s1 | homo sapiens | 56 | 24 | 0.86 | HL | train |
7wic_S | 7wic | cryo-em structure of the ss-14-bound human sstr2-gi1 complex | no | structural protein | 2022-01-03 | 2022-06-01 | electron microscopy | 2.8 | N.A. | N.A. | 35578016 | 10.1038/s41422-022-00669-z | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKGSLEVLFQGPAAAHHHHHHHH | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.556513 | 0 | 269 | 0 | 234 | 0 | 247 | 0 | 0 | single fab chain (svfv16) | N.A. | synthetic construct | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1 | rattus norvegicus;homo sapiens | 21;33 | 8;22 | 0.73;1.0 | H_only | train |
7wig_S | 7wig | cryo-em structure of the l-054,264-bound human sstr2-gi1 complex | no | structural protein | 2022-01-03 | 2022-06-01 | electron microscopy | 2.7 | N.A. | N.A. | 35578016 | 10.1038/s41422-022-00669-z | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKGSLEVLFQGPAAAHHHHHHHH | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.515589 | 0 | 269 | 0 | 234 | 0 | 247 | 0 | 0 | single fab chain (svfv16) | N.A. | synthetic construct | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;rattus norvegicus | 33;23 | 22;9 | 1.0;0.75 | H_only | train |
7te8_A | 7te8 | ca14-cbd-db21 ternary complex | no | biosynthetic protein | 2022-01-04 | 2022-01-12 | x-ray diffraction | 2 | 0.211 | 0.18 | 35145136 | 10.1038/s41467-022-28507-1 | 0 | auth_asym_id | VH | IGHV3 | N.A. | A | N.A. | SEVQLQASGGGFVQPGGSLRLSCAASGTTYGQTNMGWFRQAPGKEREFVSAISGLQGRDLYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTATYYCAFHDFLRMWEYWGQGTQVTVSS | N.A. | SEVQLQASGGGFVQPGGSLRLSCAASGTTYGQTNMGWFRQAPGKEREFVSAISGLQGRDLYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTATYYCAFHDFLRMWEYWGQGTQVTVSS | N.A. | 14.020227 | 0 | 120 | 0 | 120 | 0 | 120 | 0 | 0 | db21 | N.A. | synthetic construct | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7te8_B | 7te8 | ca14-cbd-db21 ternary complex | no | biosynthetic protein | 2022-01-04 | 2022-01-12 | x-ray diffraction | 2 | 0.211 | 0.18 | 35145136 | 10.1038/s41467-022-28507-1 | 0 | auth_asym_id | VH | IGHV3 | N.A. | B | N.A. | SEVQLQASGGGFVQPGGSLRLSCAASGTTYGQTNMGWFRQAPGKEREFVSAISGLQGRDLYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTATYYCAFHDFLRMWEYWGQGTQVTVSS | N.A. | SEVQLQASGGGFVQPGGSLRLSCAASGTTYGQTNMGWFRQAPGKEREFVSAISGLQGRDLYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTATYYCAFHDFLRMWEYWGQGTQVTVSS | N.A. | 14.013841 | 0 | 120 | 0 | 120 | 0 | 120 | 0 | 0 | db21 | N.A. | synthetic construct | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7te8_C | 7te8 | ca14-cbd-db21 ternary complex | no | biosynthetic protein | 2022-01-04 | 2022-01-12 | x-ray diffraction | 2 | 0.211 | 0.18 | 35145136 | 10.1038/s41467-022-28507-1 | 0 | auth_asym_id | VH | IGHV3 | N.A. | C | N.A. | SEVQLQASGGGFVQPGGSLRLSCAASGSTSRQYDMGWFRQAPGKEREFVSAISSNQDQPPYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTATYYCAFKQHHANGAYWGQGTQVTVSS | N.A. | EVQLQASGGGFVQPGGSLRLSCAASGSTSRQYDMGWFRQAPGKEREFVSAISSNQDQPPYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTATYYCAFKQHHANGAYWGQGTQVTVSS | N.A. | 13.939631 | 0 | 120 | 0 | 119 | 0 | 119 | 0 | 0 | ca14 | N.A. | synthetic construct | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7te8_D | 7te8 | ca14-cbd-db21 ternary complex | no | biosynthetic protein | 2022-01-04 | 2022-01-12 | x-ray diffraction | 2 | 0.211 | 0.18 | 35145136 | 10.1038/s41467-022-28507-1 | 0 | auth_asym_id | VH | IGHV3 | N.A. | D | N.A. | SEVQLQASGGGFVQPGGSLRLSCAASGSTSRQYDMGWFRQAPGKEREFVSAISSNQDQPPYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTATYYCAFKQHHANGAYWGQGTQVTVSS | N.A. | EVQLQASGGGFVQPGGSLRLSCAASGSTSRQYDMGWFRQAPGKEREFVSAISSNQDQPPYYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTATYYCAFKQHHANGAYWGQGTQVTVSS | N.A. | 13.922853 | 0 | 120 | 0 | 119 | 0 | 119 | 0 | 0 | ca14 | N.A. | synthetic construct | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7te6_C_D | 7te6 | crystal structure of glun1b-2b atd complexed to fab5 anti-glun2b antibody | no | signaling protein/immune system | 2022-01-04 | 2022-03-02 | x-ray diffraction | 4.55 | 0.324 | 0.282 | 35177668 | 10.1038/s41467-022-28559-3 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV7 | C | D | DVKLQESGGGSVKLGGSLKLSCVVSGFTFSTYYMSWVRQTPEKRLELVAVINSNGGNTYYPDNVKGRFTISRDNAENTLYLQMSSLKSEDTALYYCARRDYDGFAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIQLTQSPASLAVSLGQRATISCRASQSVSTSRYSYMHWYQHKPGQPPKLLIKYASNLESGVPARFSGSGSGTDFTLNIHPVEEEDTATYYCQHSWENPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | KLQESGGGSVKLGGSLKLSCVVSGFTFSTYYMSWVRQTPEKRLELVAVINSNGGNTYYPDNVKGRFTISRDNAENTLYLQMSSLKSEDTALYYCARRDYDGFAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIQLTQSPASLAVSLGQRATISCRASQSVSTSRYSYMHWYQHKPGQPPKLLIKYASNLESGVPARFSGSGSGTDFTLNIHPVEEEDTATYYCQHSWENPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | 21.14892 | 23.734919 | 221 | 215 | 215 | 215 | 219 | 215 | 100 | fab5 heavy chain | fab5 light chain | mus musculus | mus musculus | B | protein | glutamate receptor ionotropic, nmda 2b | rattus norvegicus | 49 | 20 | 0.87 | HL | train |
7te6_G_H | 7te6 | crystal structure of glun1b-2b atd complexed to fab5 anti-glun2b antibody | no | signaling protein/immune system | 2022-01-04 | 2022-03-02 | x-ray diffraction | 4.55 | 0.324 | 0.282 | 35177668 | 10.1038/s41467-022-28559-3 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV7 | G | H | DVKLQESGGGSVKLGGSLKLSCVVSGFTFSTYYMSWVRQTPEKRLELVAVINSNGGNTYYPDNVKGRFTISRDNAENTLYLQMSSLKSEDTALYYCARRDYDGFAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIQLTQSPASLAVSLGQRATISCRASQSVSTSRYSYMHWYQHKPGQPPKLLIKYASNLESGVPARFSGSGSGTDFTLNIHPVEEEDTATYYCQHSWENPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | KLQESGGGSVKLGGSLKLSCVVSGFTFSTYYMSWVRQTPEKRLELVAVINSNGGNTYYPDNVKGRFTISRDNAENTLYLQMSSLKSEDTALYYCARRDYDGFAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIQLTQSPASLAVSLGQRATISCRASQSVSTSRYSYMHWYQHKPGQPPKLLIKYASNLESGVPARFSGSGSGTDFTLNIHPVEEEDTATYYCQHSWENPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | 21.085962 | 23.737162 | 221 | 215 | 214 | 215 | 219 | 215 | 98 | fab5 heavy chain | fab5 light chain | mus musculus | mus musculus | F | protein | glutamate receptor ionotropic, nmda 2b | rattus norvegicus | 50 | 21 | 0.84 | HL | train |
7te9_M_N | 7te9 | cryo-em structure of glun1b-2b nmdar complexed to fab2 class1 | no | signaling protein/immune system | 2022-01-04 | 2022-03-02 | electron microscopy | 3.92 | N.A. | N.A. | 35177668 | 10.1038/s41467-022-28559-3 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | M | N | DVKLQESGGGLVQPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVAYISNGGGGTYYPDTVKGRFTISRDNAKNTLYLQMNSLKEDTAMYYCARPSRGGSSYWYFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIQMTQSPSSLSASLGGKVTITCKASQDINKYIAWYQHKPGKGPRLLIHYTSSLQPGIPSRFSGSGSGRDYSFSISNLEPEDIATYYCLQYDNLYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNES | VKLQESGGGLVQPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVAYISNGGGGTYYPDTVKGRFTISRDNAKNTLYLQMNSLKEDTAMYYCARPSRGGSSYWYFDVWGAGTTVTV | DIQMTQSPSSLSASLGGKVTITCKASQDINKYIAWYQHKPGKGPRLLIHYTSSLQPGIPSRFSGSGSGRDYSFSISNLEPEDIATYYCLQYDNLYTFGGGTKLEIK | 13.358151 | 13.336268 | 223 | 213 | 116 | 106 | 118 | 106 | 50 | fab2 heavy chain | fab2 light chain | mus musculus | mus musculus | B | protein | glutamate receptor ionotropic, nmda 2b | rattus norvegicus | 46 | 21 | 0.88 | HL | train |
7te9_H_L | 7te9 | cryo-em structure of glun1b-2b nmdar complexed to fab2 class1 | no | signaling protein/immune system | 2022-01-04 | 2022-03-02 | electron microscopy | 3.92 | N.A. | N.A. | 35177668 | 10.1038/s41467-022-28559-3 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | DVKLQESGGGLVQPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVAYISNGGGGTYYPDTVKGRFTISRDNAKNTLYLQMNSLKEDTAMYYCARPSRGGSSYWYFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIQMTQSPSSLSASLGGKVTITCKASQDINKYIAWYQHKPGKGPRLLIHYTSSLQPGIPSRFSGSGSGRDYSFSISNLEPEDIATYYCLQYDNLYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNES | VKLQESGGGLVQPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVAYISNGGGGTYYPDTVKGRFTISRDNAKNTLYLQMNSLKEDTAMYYCARPSRGGSSYWYFDVWGAGTTVTVS | DIQMTQSPSSLSASLGGKVTITCKASQDINKYIAWYQHKPGKGPRLLIHYTSSLQPGIPSRFSGSGSGRDYSFSISNLEPEDIATYYCLQYDNLYTFGGGTKLEIK | 13.381011 | 13.336272 | 223 | 213 | 117 | 106 | 119 | 106 | 50 | fab2 heavy chain | fab2 light chain | mus musculus | mus musculus | D | protein | glutamate receptor ionotropic, nmda 2b | rattus norvegicus | 41 | 20 | 0.83 | HL | train |
7tee_M_N | 7tee | cryo-em structure of glun1b-2b nmdar complexed to fab2 non-active2-like | no | signaling protein/immune system | 2022-01-04 | 2022-03-02 | electron microscopy | 6.59 | N.A. | N.A. | 35177668 | 10.1038/s41467-022-28559-3 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | M | N | DVKLQESGGGLVQPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVAYISNGGGGTYYPDTVKGRFTISRDNAKNTLYLQMNSLKEDTAMYYCARPSRGGSSYWYFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIQMTQSPSSLSASLGGKVTITCKASQDINKYIAWYQHKPGKGPRLLIHYTSSLQPGIPSRFSGSGSGRDYSFSISNLEPEDIATYYCLQYDNLYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNES | VKLQESGGGLVQPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVAYISNGGGGTYYPDTVKGRFTISRDNAKNTLYLQMNSLKEDTAMYYCARPSRGGSSYWYFDVWGAGTTVTV | DIQMTQSPSSLSASLGGKVTITCKASQDINKYIAWYQHKPGKGPRLLIHYTSSLQPGIPSRFSGSGSGRDYSFSISNLEPEDIATYYCLQYDNLYTFGGGTKLEIK | 13.412296 | 13.278992 | 223 | 213 | 116 | 106 | 118 | 106 | 54 | fab2 heavy chain | fab2 light chain | mus musculus | mus musculus | B | protein | glutamate receptor ionotropic, nmda 2b | rattus norvegicus | 29 | 17 | 1 | HL | train |
7tee_H_L | 7tee | cryo-em structure of glun1b-2b nmdar complexed to fab2 non-active2-like | no | signaling protein/immune system | 2022-01-04 | 2022-03-02 | electron microscopy | 6.59 | N.A. | N.A. | 35177668 | 10.1038/s41467-022-28559-3 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | DVKLQESGGGLVQPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVAYISNGGGGTYYPDTVKGRFTISRDNAKNTLYLQMNSLKEDTAMYYCARPSRGGSSYWYFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIQMTQSPSSLSASLGGKVTITCKASQDINKYIAWYQHKPGKGPRLLIHYTSSLQPGIPSRFSGSGSGRDYSFSISNLEPEDIATYYCLQYDNLYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNES | VKLQESGGGLVQPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVAYISNGGGGTYYPDTVKGRFTISRDNAKNTLYLQMNSLKEDTAMYYCARPSRGGSSYWYFDVWGAGTTVTVS | DIQMTQSPSSLSASLGGKVTITCKASQDINKYIAWYQHKPGKGPRLLIHYTSSLQPGIPSRFSGSGSGRDYSFSISNLEPEDIATYYCLQYDNLYTFGGGTKLEIK | 13.424849 | 13.279003 | 223 | 213 | 117 | 106 | 119 | 106 | 53 | fab2 heavy chain | fab2 light chain | mus musculus | mus musculus | D | protein | glutamate receptor ionotropic, nmda 2b | rattus norvegicus | 27 | 17 | 1 | HL | train |
7teq_H_L | 7teq | cryo-em structure of glun1b-2b nmdar in complex with fab5 active conformation | no | signaling protein/immune system | 2022-01-05 | 2022-03-02 | electron microscopy | 7.51 | N.A. | N.A. | 35177668 | 10.1038/s41467-022-28559-3 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV7 | H | L | DVKLQESGGGSVKLGGSLKLSCVVSGFTFSTYYMSWVRQTPEKRLELVAVINSNGGNTYYPDNVKGRFTISRDNAENTLYLQMSSLKSEDTALYYCARRDYDGFAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIQLTQSPASLAVSLGQRATISCRASQSVSTSRYSYMHWYQHKPGQPPKLLIKYASNLESGVPARFSGSGSGTDFTLNIHPVEEEDTATYYCQHSWENPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPI | KLQESGGGSVKLGGSLKLSCVVSGFTFSTYYMSWVRQTPEKRLELVAVINSNGGNTYYPDNVKGRFTISRDNAENTLYLQMSSLKSEDTALYYCARRDYDGFAMDYWGQGTSVTV | DIQLTQSPASLAVSLGQRATISCRASQSVSTSRYSYMHWYQHKPGQPPKLLIKYASNLESGVPARFSGSGSGTDFTLNIHPVEEEDTATYYCQHSWENPYTFGGGTKLEIKR | 13.341303 | 13.652283 | 221 | 209 | 115 | 112 | 115 | 112 | 36 | fab5 heavy chain | fab5 light chain | mus musculus | mus musculus | B | protein | glutamate receptor ionotropic, nmda 2b | rattus norvegicus | 40 | 19 | 0.9 | HL | train |
7teq_M_N | 7teq | cryo-em structure of glun1b-2b nmdar in complex with fab5 active conformation | no | signaling protein/immune system | 2022-01-05 | 2022-03-02 | electron microscopy | 7.51 | N.A. | N.A. | 35177668 | 10.1038/s41467-022-28559-3 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV7 | M | N | DVKLQESGGGSVKLGGSLKLSCVVSGFTFSTYYMSWVRQTPEKRLELVAVINSNGGNTYYPDNVKGRFTISRDNAENTLYLQMSSLKSEDTALYYCARRDYDGFAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIQLTQSPASLAVSLGQRATISCRASQSVSTSRYSYMHWYQHKPGQPPKLLIKYASNLESGVPARFSGSGSGTDFTLNIHPVEEEDTATYYCQHSWENPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPI | KLQESGGGSVKLGGSLKLSCVVSGFTFSTYYMSWVRQTPEKRLELVAVINSNGGNTYYPDNVKGRFTISRDNAENTLYLQMSSLKSEDTALYYCARRDYDGFAMDYWGQGTSVTVS | DIQLTQSPASLAVSLGQRATISCRASQSVSTSRYSYMHWYQHKPGQPPKLLIKYASNLESGVPARFSGSGSGTDFTLNIHPVEEEDTATYYCQHSWENPYTFGGGTKLEIKR | 13.403565 | 13.652299 | 221 | 209 | 116 | 112 | 116 | 112 | 37 | fab5 heavy chain | fab5 light chain | mus musculus | mus musculus | D | protein | glutamate receptor ionotropic, nmda 2b | rattus norvegicus | 41 | 19 | 0.86 | HL | train |
7tes_H_L | 7tes | cryo-em structure of glun1b-2b nmdar in complex with fab5 in non-active1 conformation | no | signaling protein/immune system | 2022-01-05 | 2022-03-02 | electron microscopy | 4.7 | N.A. | N.A. | 35177668 | 10.1038/s41467-022-28559-3 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV7 | H | L | DVKLQESGGGSVKLGGSLKLSCVVSGFTFSTYYMSWVRQTPEKRLELVAVINSNGGNTYYPDNVKGRFTISRDNAENTLYLQMSSLKSEDTALYYCARRDYDGFAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIQLTQSPASLAVSLGQRATISCRASQSVSTSRYSYMHWYQHKPGQPPKLLIKYASNLESGVPARFSGSGSGTDFTLNIHPVEEEDTATYYCQHSWENPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | KLQESGGGSVKLGGSLKLSCVVSGFTFSTYYMSWVRQTPEKRLELVAVINSNGGNTYYPDNVKGRFTISRDNAENTLYLQMSSLKSEDTALYYCARRDYDGFAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIQLTQSPASLAVSLGQRATISCRASQSVSTSRYSYMHWYQHKPGQPPKLLIKYASNLESGVPARFSGSGSGTDFTLNIHPVEEEDTATYYCQHSWENPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | 21.47232 | 23.006016 | 221 | 215 | 215 | 215 | 219 | 215 | 101 | fab5 heavy chain | fab5 light chain | mus musculus | mus musculus | B | protein | glutamate receptor ionotropic, nmda 2b | rattus norvegicus | 49 | 22 | 0.85 | HL | train |
7tes_M_N | 7tes | cryo-em structure of glun1b-2b nmdar in complex with fab5 in non-active1 conformation | no | signaling protein/immune system | 2022-01-05 | 2022-03-02 | electron microscopy | 4.7 | N.A. | N.A. | 35177668 | 10.1038/s41467-022-28559-3 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV7 | M | N | DVKLQESGGGSVKLGGSLKLSCVVSGFTFSTYYMSWVRQTPEKRLELVAVINSNGGNTYYPDNVKGRFTISRDNAENTLYLQMSSLKSEDTALYYCARRDYDGFAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIQLTQSPASLAVSLGQRATISCRASQSVSTSRYSYMHWYQHKPGQPPKLLIKYASNLESGVPARFSGSGSGTDFTLNIHPVEEEDTATYYCQHSWENPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | KLQESGGGSVKLGGSLKLSCVVSGFTFSTYYMSWVRQTPEKRLELVAVINSNGGNTYYPDNVKGRFTISRDNAENTLYLQMSSLKSEDTALYYCARRDYDGFAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIQLTQSPASLAVSLGQRATISCRASQSVSTSRYSYMHWYQHKPGQPPKLLIKYASNLESGVPARFSGSGSGTDFTLNIHPVEEEDTATYYCQHSWENPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | 21.472332 | 23.00602 | 221 | 215 | 215 | 215 | 219 | 215 | 95 | fab5 heavy chain | fab5 light chain | mus musculus | mus musculus | D | protein | glutamate receptor ionotropic, nmda 2b | rattus norvegicus | 47 | 20 | 0.83 | HL | train |
7wj5_E | 7wj5 | cryo-em structure of human somatostatin receptor 2 complex with its agonist somatostatin delineates the ligand binding specificity | no | membrane protein/immune system | 2022-01-05 | 2022-07-13 | electron microscopy | 3.72 | N.A. | N.A. | 35446253 | 10.7554/eLife.76823 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAENLYFQGHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.394154 | 0 | 266 | 0 | 232 | 0 | 246 | 0 | 0 | gai1 antibody (scfv16) | N.A. | homo sapiens | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 32;23 | 20;10 | 0.95;0.77 | H_only | train |
7tfn_H_L | 7tfn | cryo-em structure of cd4bs antibody ab1303 in complex with hiv-1 env trimer bg505 sosip.664 | no | viral protein/immune system | 2022-01-06 | 2022-01-19 | electron microscopy | 4 | N.A. | N.A. | 35136084 | 10.1038/s41467-022-28424-3 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV4 | H | L | QVQLQESGPGLVKPSETLSLTCAVSGGSISGNYWSWIRQSPGKGLEWIGHINDYSGRTDYNPSLKSRVTISTDTSTNQFFLTLSSVSAADTAVYYCARRDTDFWRGIYVFEFWGQGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | QSVLTQSPSASASLGASVKLTCTLSSGLRSYTIAWYQRQRGQAPRFLLRLDSVGSHTKVDGIPDRFSGSSSGTERYLTISNLQSEDEADYFCQTWTTGIYIFGGGTRLSVLSQPKASPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLQESGPGLVKPSETLSLTCAVSGGSISGNYWSWIRQSPGKGLEWIGHINDYSGRTDYNPSLKSRVTISTDTSTNQFFLTLSSVSAADTAVYYCARRDTDFWRGIYVFEFWGQGVLVTVSS | QSVLTQSPSASASLGASVKLTCTLSSGLRSYTIAWYQRQRGQAPRFLLRLDSVGSHTKVDGIPDRFSGSSSGTERYLTISNLQSEDEADYFCQTWTTGIYIFGGGTRLSVLS | 14.284309 | 13.549571 | 235 | 217 | 123 | 112 | 123 | 112 | 54 | anti-hiv-1 cd4bs antibody fab ab1303 - heavy chain | cd4 binding site antibody fab ab1303 - light chain | macaca mulatta | macaca mulatta | A | protein | envelope glycoprotein bg505 sosip.664 - gp120 | human immunodeficiency virus 1 | 80 | 27 | 0.75 | HL | train |
7tfn_I_J | 7tfn | cryo-em structure of cd4bs antibody ab1303 in complex with hiv-1 env trimer bg505 sosip.664 | no | viral protein/immune system | 2022-01-06 | 2022-01-19 | electron microscopy | 4 | N.A. | N.A. | 35136084 | 10.1038/s41467-022-28424-3 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV4 | I | J | QVQLQESGPGLVKPSETLSLTCAVSGGSISGNYWSWIRQSPGKGLEWIGHINDYSGRTDYNPSLKSRVTISTDTSTNQFFLTLSSVSAADTAVYYCARRDTDFWRGIYVFEFWGQGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | QSVLTQSPSASASLGASVKLTCTLSSGLRSYTIAWYQRQRGQAPRFLLRLDSVGSHTKVDGIPDRFSGSSSGTERYLTISNLQSEDEADYFCQTWTTGIYIFGGGTRLSVLSQPKASPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLQESGPGLVKPSETLSLTCAVSGGSISGNYWSWIRQSPGKGLEWIGHINDYSGRTDYNPSLKSRVTISTDTSTNQFFLTLSSVSAADTAVYYCARRDTDFWRGIYVFEFWGQGVLVTVSS | SVLTQSPSASASLGASVKLTCTLSSGLRSYTIAWYQRQRGQAPRFLLRLDSVGSHTKVDGIPDRFSGSSSGTERYLTISNLQSEDEADYFCQTWTTGIYIFGGGTRLSVLS | 14.260398 | 13.401322 | 235 | 217 | 123 | 111 | 123 | 111 | 53 | anti-hiv-1 cd4bs antibody fab ab1303 - heavy chain | cd4 binding site antibody fab ab1303 - light chain | macaca mulatta | macaca mulatta | B | protein | envelope glycoprotein bg505 sosip.664 - gp120 | human immunodeficiency virus 1 | 69 | 27 | 0.77 | HL | train |
7tfn_P_Q | 7tfn | cryo-em structure of cd4bs antibody ab1303 in complex with hiv-1 env trimer bg505 sosip.664 | no | viral protein/immune system | 2022-01-06 | 2022-01-19 | electron microscopy | 4 | N.A. | N.A. | 35136084 | 10.1038/s41467-022-28424-3 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV4 | P | Q | QVQLQESGPGLVKPSETLSLTCAVSGGSISGNYWSWIRQSPGKGLEWIGHINDYSGRTDYNPSLKSRVTISTDTSTNQFFLTLSSVSAADTAVYYCARRDTDFWRGIYVFEFWGQGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | QSVLTQSPSASASLGASVKLTCTLSSGLRSYTIAWYQRQRGQAPRFLLRLDSVGSHTKVDGIPDRFSGSSSGTERYLTISNLQSEDEADYFCQTWTTGIYIFGGGTRLSVLSQPKASPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLQESGPGLVKPSETLSLTCAVSGGSISGNYWSWIRQSPGKGLEWIGHINDYSGRTDYNPSLKSRVTISTDTSTNQFFLTLSSVSAADTAVYYCARRDTDFWRGIYVFEFWGQGVLVTVSS | QSVLTQSPSASASLGASVKLTCTLSSGLRSYTIAWYQRQRGQAPRFLLRLDSVGSHTKVDGIPDRFSGSSSGTERYLTISNLQSEDEADYFCQTWTTGIYIFGGGTRLSVL | 14.36272 | 13.423348 | 235 | 217 | 123 | 111 | 123 | 111 | 53 | anti-hiv-1 cd4bs antibody fab ab1303 - heavy chain | cd4 binding site antibody fab ab1303 - light chain | macaca mulatta | macaca mulatta | C | protein | envelope glycoprotein bg505 sosip.664 - gp120 | human immunodeficiency virus 1 | 77 | 28 | 0.72 | HL | train |
7tfo_H_L | 7tfo | cryo-em structure of hiv-1 env trimer bg505 sosip.664 in complex with cd4bs antibody ab1573 | no | viral protein/immune system | 2022-01-06 | 2022-01-26 | electron microscopy | 4.1 | N.A. | N.A. | 35136084 | 10.1038/s41467-022-28424-3 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV1 | H | L | QVQLVQSGAEVKKPGASVKVSCKASGFTFGRYSFTWVRQAPGQGLEWVGVIVPLVGVTNSAKKFQGRVTITADTSTNTVYMDLSSLRSEDTAVYYCARVGDRFGSGYAMDVWGRGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT | QSALTQPPSVSGAPGERVTISCSGSGSNFEYSFVYWYQQVPGMAPKLLIYDNYKRPSGVSDRFSGSRSGTSASLTITGLQTEDESDYYCQSYDSSLTYWVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAEVKKPGASVKVSCKASGFTFGRYSFTWVRQAPGQGLEWVGVIVPLVGVTNSAKKFQGRVTITADTSTNTVYMDLSSLRSEDTAVYYCARVGDRFGSGYAMDVWGRGALVTVSS | SALTQPPSVSGAPGERVTISCSGSGSNFEYSFVYWYQQVPGMAPKLLIYDNYKRPSGVSDRFSGSRSGTSASLTITGLQTEDESDYYCQSYDSSLTYWVFGGGTRLTVLG | 14.115213 | 13.631494 | 228 | 216 | 122 | 110 | 122 | 110 | 49 | cd4 binding site antibody ab1573 - fab heavy chain | cd4 binding site antibody ab1573 - fab light chain | macaca mulatta | macaca mulatta | A | protein | envelope glycoprotein bg505 sosip.664 - gp120 | human immunodeficiency virus 1 | 71 | 21 | 0.6 | HL | train |
7tfo_I_J | 7tfo | cryo-em structure of hiv-1 env trimer bg505 sosip.664 in complex with cd4bs antibody ab1573 | no | viral protein/immune system | 2022-01-06 | 2022-01-26 | electron microscopy | 4.1 | N.A. | N.A. | 35136084 | 10.1038/s41467-022-28424-3 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV1 | I | J | QVQLVQSGAEVKKPGASVKVSCKASGFTFGRYSFTWVRQAPGQGLEWVGVIVPLVGVTNSAKKFQGRVTITADTSTNTVYMDLSSLRSEDTAVYYCARVGDRFGSGYAMDVWGRGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT | QSALTQPPSVSGAPGERVTISCSGSGSNFEYSFVYWYQQVPGMAPKLLIYDNYKRPSGVSDRFSGSRSGTSASLTITGLQTEDESDYYCQSYDSSLTYWVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAEVKKPGASVKVSCKASGFTFGRYSFTWVRQAPGQGLEWVGVIVPLVGVTNSAKKFQGRVTITADTSTNTVYMDLSSLRSEDTAVYYCARVGDRFGSGYAMDVWGRGALVTVSS | SALTQPPSVSGAPGERVTISCSGSGSNFEYSFVYWYQQVPGMAPKLLIYDNYKRPSGVSDRFSGSRSGTSASLTITGLQTEDESDYYCQSYDSSLTYWVFGGGTRLTVLG | 14.166322 | 13.582921 | 228 | 216 | 122 | 110 | 122 | 110 | 42 | cd4 binding site antibody ab1573 - fab heavy chain | cd4 binding site antibody ab1573 - fab light chain | macaca mulatta | macaca mulatta | B | protein | envelope glycoprotein bg505 sosip.664 - gp120 | human immunodeficiency virus 1 | 73 | 21 | 0.62 | HL | train |
7tfo_P_Q | 7tfo | cryo-em structure of hiv-1 env trimer bg505 sosip.664 in complex with cd4bs antibody ab1573 | no | viral protein/immune system | 2022-01-06 | 2022-01-26 | electron microscopy | 4.1 | N.A. | N.A. | 35136084 | 10.1038/s41467-022-28424-3 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV1 | P | Q | QVQLVQSGAEVKKPGASVKVSCKASGFTFGRYSFTWVRQAPGQGLEWVGVIVPLVGVTNSAKKFQGRVTITADTSTNTVYMDLSSLRSEDTAVYYCARVGDRFGSGYAMDVWGRGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT | QSALTQPPSVSGAPGERVTISCSGSGSNFEYSFVYWYQQVPGMAPKLLIYDNYKRPSGVSDRFSGSRSGTSASLTITGLQTEDESDYYCQSYDSSLTYWVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLVQSGAEVKKPGASVKVSCKASGFTFGRYSFTWVRQAPGQGLEWVGVIVPLVGVTNSAKKFQGRVTITADTSTNTVYMDLSSLRSEDTAVYYCARVGDRFGSGYAMDVWGRGALVTV | SALTQPPSVSGAPGERVTISCSGSGSNFEYSFVYWYQQVPGMAPKLLIYDNYKRPSGVSDRFSGSRSGTSASLTITGLQTEDESDYYCQSYDSSLTYWVFGGGTRLTV | 13.78178 | 13.376699 | 228 | 216 | 117 | 108 | 119 | 108 | 44 | cd4 binding site antibody ab1573 - fab heavy chain | cd4 binding site antibody ab1573 - fab light chain | macaca mulatta | macaca mulatta | C | protein | envelope glycoprotein bg505 sosip.664 - gp120 | human immunodeficiency virus 1 | 72 | 21 | 0.58 | HL | train |
7tgf_B | 7tgf | single-domain vhh intrabodies neutralize ricin toxin. | no | immune system/toxin | 2022-01-07 | 2022-10-12 | x-ray diffraction | 1.35 | 0.181 | 0.158 | 35182523 | 10.1016/j.jbc.2022.101742 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLAETGGGLVQPGGSLRLSCAASGFTLDDYAIGWFRQAPGKEREGVSCISSSDGRTYYADSVKGRFTISRDNAKNTVYLQMNSLKSEDTAVYYCATEEVCTLGIFGHGPDDYWGQGTQVTVSSEPKTPKPQ | N.A. | VQLAETGGGLVQPGGSLRLSCAASGFTLDDYAIGWFRQAPGKEREGVSCISSSDGRTYYADSVKGRFTISRDNAKNTVYLQMNSLKSEDTAVYYCATEEVCTLGIFGHGPDDYWGQGTQVTVSSEPKTP | N.A. | 14.070653 | 0 | 133 | 0 | 129 | 0 | 129 | 0 | 0 | vhh camelid antibody | N.A. | vicugna pacos | N.A. | A | protein | ricin chain a | ricinus communis | 47 | 19 | 0.9 | H_only | train |
7tgi_B | 7tgi | single-domain vhh intrabodies neutralize ricin toxin | no | immune system/toxin | 2022-01-07 | 2022-10-12 | x-ray diffraction | 2.1 | 0.222 | 0.176 | 35182523 | 10.1016/j.jbc.2022.101742 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLVETGGLVQPGGSLRLSCAASGLTLDYYNIGWFRQAPGKEREWVSSISSSDGRKYYVNSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAADRDRLPSAITYEYNYWGQGTQVTVSSEPKTPKPQ | N.A. | LVETGGLVQPGGSLRLSCAASGLTLDYYNIGWFRQAPGKEREWVSSISSSDGRKYYVNSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAADRDRLPSAITYEYNYWGQGTQVTVS | N.A. | 13.526693 | 0 | 131 | 0 | 117 | 0 | 119 | 0 | 0 | vhh antibody | N.A. | vicugna pacos | N.A. | A | protein | ricin chain a | ricinus communis | 48 | 13 | 0.59 | H_only | train |
7qqb_H_L | 7qqb | crystal structure of the envelope glycoprotein complex of puumala virus in complex with the scfv fragment of the broadly neutralizing human antibody adi-42898 | no | viral protein | 2022-01-07 | 2023-06-21 | x-ray diffraction | 2.6 | 0.249 | 0.212 | 37315110 | 10.1126/scitranslmed.adg1855 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV2 | H | L | RSQVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVTWFDVSKKDYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARNLIRYSGSYFPVHGMDVWGQGTTVTVSSGTGGSGGGGSGGGGSGGGASDIVMTQSPLSLPVTPGEPASISCRSSQSLLHTYGYNCLDWYLQRPGQSPQLLISLGSYRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALHPFTFGGGTKVEIKGPFEDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK | RSQVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVTWFDVSKKDYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARNLIRYSGSYFPVHGMDVWGQGTTVTVSSGTGGSGGGGSGGGGSGGGASDIVMTQSPLSLPVTPGEPASISCRSSQSLLHTYGYNCLDWYLQRPGQSPQLLISLGSYRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALHPFTFGGGTKVEIKGPFEDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK | QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVTWFDVSKKDYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARNLIRYSGSYFPVHGMDVWGQGTTVTVSS | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHTYGYNCLDWYLQRPGQSPQLLISLGSYRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALHPFTFGGGTKVE | 14.113506 | 13.463474 | 298 | 298 | 122 | 109 | 126 | 109 | 50 | single chain variable fragment (scfv) of adi-42898 | single chain variable fragment (scfv) of adi-42898 | homo sapiens | homo sapiens | A;B | protein;protein | envelope polyprotein;envelope polyprotein | puumala orthohantavirus;puumala orthohantavirus | 21;27 | 11;13 | 1.0;1.0 | HL | train |
7wk8_C_D | 7wk8 | sars-cov-2 omicron spike protein sd1 in complex with s3h3 fab | yes | viral protein | 2022-01-08 | 2022-01-26 | electron microscopy | 3.61 | N.A. | N.A. | 35228716 | 10.1038/s41586-022-04581-9 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV7 | C | D | QVQLQQPGAELVRPGASVKLSCKASGYSFTRFWMNWVKQRPGQGLEWIGMIHPSDSETRLNQKFKDKATLTVDKSSTTAYMQLSSPTSEDSAVYYCARKDYDYDAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKI | DIVLTQSPASLAVSLGQRATISCRASKSVSASVYSYMHWYQQKPGQPPKLLIYLASSLESGVPARFSGSGSGTDFTLNIHPVEEEDAATYYCHHSRELPPAFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | QVQLQQPGAELVRPGASVKLSCKASGYSFTRFWMNWVKQRPGQGLEWIGMIHPSDSETRLNQKFKDKATLTVDKSSTTAYMQLSSPTSEDSAVYYCARKDYDYDAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKI | DIVLTQSPASLAVSLGQRATISCRASKSVSASVYSYMHWYQQKPGQPPKLLIYLASSLESGVPARFSGSGSGTDFTLNIHPVEEEDAATYYCHHSRELPPAFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | 21.690887 | 23.91763 | 217 | 215 | 217 | 215 | 217 | 215 | 97 | heavy chain of s3h3 fab | light chain of s3h3 fab | mus musculus | mus musculus | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 33 | 15 | 0.83 | HL | train |
7wjy_B_C | 7wjy | omicron spike trimer with 6m6 antibody | yes | viral protein | 2022-01-08 | 2022-07-13 | electron microscopy | 3.24 | N.A. | N.A. | 35768499 | 10.1038/s41422-022-00684-0 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV3 | B | C | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAIHWVRQAPGKGLEWVSGITWNSGTIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKHHQIAVAGDAEDYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | SYELTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSRSDRVVFGGGTKLTALGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAIHWVRQAPGKGLEWVSGITWNSGTIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKHHQIAVAGDAEDYYFDYWGQGTLVTVS | YELTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSRSDRVVFGGGTKLTAL | 14.274795 | 13.546379 | 227 | 214 | 125 | 107 | 125 | 107 | 38 | 6m6 heavy chain | 6m6 light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 70 | 17 | 0.46 | HL | train |
7wjy_E_F | 7wjy | omicron spike trimer with 6m6 antibody | yes | viral protein | 2022-01-08 | 2022-07-13 | electron microscopy | 3.24 | N.A. | N.A. | 35768499 | 10.1038/s41422-022-00684-0 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | E | F | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAIHWVRQAPGKGLEWVSGITWNSGTIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKHHQIAVAGDAEDYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | SYELTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSRSDRVVFGGGTKLTALGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAIHWVRQAPGKGLEWVSGITWNSGTIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKHHQIAVAGDAEDYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | YELTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSRSDRVVFGGGTKLTALGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 21.27288 | 24.183187 | 227 | 214 | 226 | 210 | 226 | 210 | 89 | 6m6 heavy chain | 6m6 light chain | homo sapiens | homo sapiens | D | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 72 | 18 | 0.47 | HL | train |
7wjz_A_C | 7wjz | omicron spike bitrimer with 6m6 antibody | yes | viral protein | 2022-01-08 | 2022-07-13 | electron microscopy | 3.34 | N.A. | N.A. | 35768499 | 10.1038/s41422-022-00684-0 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | A | C | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAIHWVRQAPGKGLEWVSGITWNSGTIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKHHQIAVAGDAEDYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | SYELTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSRSDRVVFGGGTKLTALGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAIHWVRQAPGKGLEWVSGITWNSGTIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKHHQIAVAGDAEDYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | YELTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSRSDRVVFGGGTKLTALGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 21.24968 | 24.116154 | 227 | 214 | 226 | 210 | 226 | 210 | 91 | 6m6 heavy chain | 6m6 light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 68 | 15 | 0.44 | HL | train |
7wjz_D_N | 7wjz | omicron spike bitrimer with 6m6 antibody | yes | viral protein | 2022-01-08 | 2022-07-13 | electron microscopy | 3.34 | N.A. | N.A. | 35768499 | 10.1038/s41422-022-00684-0 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | D | N | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAIHWVRQAPGKGLEWVSGITWNSGTIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKHHQIAVAGDAEDYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | SYELTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSRSDRVVFGGGTKLTALGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAIHWVRQAPGKGLEWVSGITWNSGTIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKHHQIAVAGDAEDYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | YELTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSRSDRVVFGGGTKLTALGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 21.252724 | 24.109869 | 227 | 214 | 226 | 210 | 226 | 210 | 93 | 6m6 heavy chain | 6m6 light chain | homo sapiens | homo sapiens | I | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 68 | 15 | 0.44 | HL | train |
7wjz_E_O | 7wjz | omicron spike bitrimer with 6m6 antibody | yes | viral protein | 2022-01-08 | 2022-07-13 | electron microscopy | 3.34 | N.A. | N.A. | 35768499 | 10.1038/s41422-022-00684-0 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | E | O | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAIHWVRQAPGKGLEWVSGITWNSGTIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKHHQIAVAGDAEDYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | SYELTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSRSDRVVFGGGTKLTALGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAIHWVRQAPGKGLEWVSGITWNSGTIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKHHQIAVAGDAEDYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | YELTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSRSDRVVFGGGTKLTALGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 21.24919 | 24.113922 | 227 | 214 | 226 | 210 | 226 | 210 | 91 | 6m6 heavy chain | 6m6 light chain | homo sapiens | homo sapiens | J | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 68 | 15 | 0.44 | HL | train |
7wjz_F_P | 7wjz | omicron spike bitrimer with 6m6 antibody | yes | viral protein | 2022-01-08 | 2022-07-13 | electron microscopy | 3.34 | N.A. | N.A. | 35768499 | 10.1038/s41422-022-00684-0 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | F | P | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAIHWVRQAPGKGLEWVSGITWNSGTIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKHHQIAVAGDAEDYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | SYELTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSRSDRVVFGGGTKLTALGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAIHWVRQAPGKGLEWVSGITWNSGTIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKHHQIAVAGDAEDYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | YELTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSRSDRVVFGGGTKLTALGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 21.255713 | 24.117039 | 227 | 214 | 226 | 210 | 226 | 210 | 90 | 6m6 heavy chain | 6m6 light chain | homo sapiens | homo sapiens | K | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 67 | 15 | 0.44 | HL | train |
7wjz_G_Q | 7wjz | omicron spike bitrimer with 6m6 antibody | yes | viral protein | 2022-01-08 | 2022-07-13 | electron microscopy | 3.34 | N.A. | N.A. | 35768499 | 10.1038/s41422-022-00684-0 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | G | Q | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAIHWVRQAPGKGLEWVSGITWNSGTIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKHHQIAVAGDAEDYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | SYELTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSRSDRVVFGGGTKLTALGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAIHWVRQAPGKGLEWVSGITWNSGTIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKHHQIAVAGDAEDYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | YELTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSRSDRVVFGGGTKLTALGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 21.251436 | 24.11188 | 227 | 214 | 226 | 210 | 226 | 210 | 94 | 6m6 heavy chain | 6m6 light chain | homo sapiens | homo sapiens | L | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 66 | 15 | 0.44 | HL | train |
7wjz_H_R | 7wjz | omicron spike bitrimer with 6m6 antibody | yes | viral protein | 2022-01-08 | 2022-07-13 | electron microscopy | 3.34 | N.A. | N.A. | 35768499 | 10.1038/s41422-022-00684-0 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | H | R | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAIHWVRQAPGKGLEWVSGITWNSGTIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKHHQIAVAGDAEDYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | SYELTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSRSDRVVFGGGTKLTALGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAIHWVRQAPGKGLEWVSGITWNSGTIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKHHQIAVAGDAEDYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | YELTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSRSDRVVFGGGTKLTALGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 21.250412 | 24.115377 | 227 | 214 | 226 | 210 | 226 | 210 | 90 | 6m6 heavy chain | 6m6 light chain | homo sapiens | homo sapiens | M | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 68 | 15 | 0.44 | HL | train |
7wk0_A_B | 7wk0 | local refine of omicron spike bitrimer with 6m6 antibody | yes | viral protein | 2022-01-08 | 2022-07-13 | electron microscopy | 3.32 | N.A. | N.A. | 35768499 | 10.1038/s41422-022-00684-0 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | A | B | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAIHWVRQAPGKGLEWVSGITWNSGTIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKHHQIAVAGDAEDYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | SYELTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSRSDRVVFGGGTKLTALGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAIHWVRQAPGKGLEWVSGITWNSGTIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKHHQIAVAGDAEDYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | YELTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSRSDRVVFGGGTKLTALGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 21.236952 | 24.01651 | 226 | 214 | 226 | 210 | 226 | 210 | 89 | 6m6 heavy chain | 6m6 light chain | homo sapiens | homo sapiens | C | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 70 | 18 | 0.49 | HL | train |
7wk0_D_E | 7wk0 | local refine of omicron spike bitrimer with 6m6 antibody | yes | viral protein | 2022-01-08 | 2022-07-13 | electron microscopy | 3.32 | N.A. | N.A. | 35768499 | 10.1038/s41422-022-00684-0 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | D | E | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAIHWVRQAPGKGLEWVSGITWNSGTIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKHHQIAVAGDAEDYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | SYELTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSRSDRVVFGGGTKLTALGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAIHWVRQAPGKGLEWVSGITWNSGTIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKHHQIAVAGDAEDYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | YELTQPPSVSVAPGQTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSRSDRVVFGGGTKLTALGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 21.266434 | 23.987682 | 226 | 214 | 226 | 210 | 226 | 210 | 90 | 6m6 heavy chain | 6m6 light chain | homo sapiens | homo sapiens | F | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 66 | 15 | 0.44 | HL | train |
7th2_C | 7th2 | single-domain vhh intrabodies neutralize ricin toxin | no | immune system/toxin | 2022-01-10 | 2022-10-12 | x-ray diffraction | 1.84 | 0.187 | 0.149 | 35182523 | 10.1016/j.jbc.2022.101742 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | QVQLAESGGGLVQPGGSLRLSCVASPSLDYYGIGWFRQAPGKEREGVSCITGSEGSTYYADSVKGRFTISRDNAKNTVFLQMDSLKPEDTAVYYCAAADPLPLVCTWGDEYDYWGQGTQVTVSSEPKTPKPQ | N.A. | QVQLAESGGGLVQPGGSLRLSCVASPSLDYYGIGWFRQAPGKEREGVSCITGSEGSTYYADSVKGRFTISRDNAKNTVFLQMDSLKPEDTAVYYCAAADPLPLVCTWGDEYDYWGQGTQVTVSSEPKT | N.A. | 14.217045 | 0 | 132 | 0 | 128 | 0 | 128 | 0 | 0 | vhh antibody | N.A. | vicugna pacos | N.A. | A | protein | ricin a chain | ricinus communis | 51 | 17 | 0.77 | H_only | train |
7th2_D | 7th2 | single-domain vhh intrabodies neutralize ricin toxin | no | immune system/toxin | 2022-01-10 | 2022-10-12 | x-ray diffraction | 1.84 | 0.187 | 0.149 | 35182523 | 10.1016/j.jbc.2022.101742 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | QVQLAESGGGLVQPGGSLRLSCVASPSLDYYGIGWFRQAPGKEREGVSCITGSEGSTYYADSVKGRFTISRDNAKNTVFLQMDSLKPEDTAVYYCAAADPLPLVCTWGDEYDYWGQGTQVTVSSEPKTPKPQ | N.A. | QLAESGGGLVQPGGSLRLSCVASPSLDYYGIGWFRQAPGKEREGVSCITGSEGSTYYADSVKGRFTISRDNAKNTVFLQMDSLKPEDTAVYYCAAADPLPLVCTWGDEYDYWGQGTQVTVSS | N.A. | 13.480737 | 0 | 132 | 0 | 122 | 0 | 122 | 0 | 0 | vhh antibody | N.A. | vicugna pacos | N.A. | B | protein | ricin a chain | ricinus communis | 52 | 18 | 0.86 | H_only | train |
7wki_B | 7wki | structure of the ultra-affinity complex between cfh and a nanobody | no | immune system | 2022-01-10 | 2022-11-23 | x-ray diffraction | 2.6 | 0.239 | 0.192 | 35452676 | 10.1016/j.jbc.2022.101962 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLVESGGGLVQAGGSLRLSCAASGLTVDDYAIGWFRQAPGKEREGVSCISSSNGSTYYADSVKGRFTISSDNAKNTAYLQMNSLKPEDTAVYYCAAAVSPNLECGTGPFGIYASYYGMDYWGQGTQVTVSSAAGHHHHHH | N.A. | VQLVESGGGLVQAGGSLRLSCAASGLTVDDYAIGWFRQAPGKEREGVSCISSSNGSTYYADSVKGRFTISSDNAKNTAYLQMNSLKPEDTAVYYCAAAVSPNLECGTGPFGIYASYYGMDYWGQGTQVTVSS | N.A. | 13.926929 | 0 | 142 | 0 | 132 | 0 | 132 | 0 | 0 | anti-cfh nanobody (vhh) | N.A. | vicugna pacos | N.A. | A | protein | complement factor h | homo sapiens | 45 | 19 | 0.73 | H_only | train |
7tho_H_L | 7tho | integrin alpha iib beta3 complex with eptifibatide | no | blood clotting/inhibitor | 2022-01-11 | 2022-08-17 | x-ray diffraction | 2.75 | 0.222 | 0.189 | 36113427 | 10.1016/j.cell.2022.08.008 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR | DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR | DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | 23.074492 | 23.149492 | 216 | 214 | 216 | 214 | 216 | 214 | 95 | fab heavy chain | fab light chain | mus musculus | mus musculus | A | protein | integrin alpha-iib | homo sapiens | 42 | 19 | 0.86 | HL | train |
7tho_E_F | 7tho | integrin alpha iib beta3 complex with eptifibatide | no | blood clotting/inhibitor | 2022-01-11 | 2022-08-17 | x-ray diffraction | 2.75 | 0.222 | 0.189 | 36113427 | 10.1016/j.cell.2022.08.008 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | E | F | EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR | DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR | DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | 22.83539 | 23.137861 | 216 | 214 | 214 | 214 | 216 | 214 | 101 | fab heavy chain | fab light chain | mus musculus | mus musculus | C | protein | integrin alpha-iib | homo sapiens | 46 | 21 | 0.84 | HL | train |
7tht_H_L | 7tht | cryoem structure of sars-cov-2 s protein in complex with receptor binding domain antibody dh1042 | no | viral protein/immune system | 2022-01-12 | 2022-02-16 | electron microscopy | 3.42 | N.A. | N.A. | 35447081 | 10.1016/j.molcel.2022.03.028 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | H | L | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGRVTITADKSTSTAYLELSSLRSEDTAVYYCARYMVTRDQYYYDMDVWGQGTTVTVS | DIQMTQSPSSLSASVGDRVTITCRASQSISNYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSPPPTFGQGTKLEI | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGRVTITADKSTSTAYLELSSLRSEDTAVYYCARYMVTRDQYYYDMDVWGQGTTVTVS | DIQMTQSPSSLSASVGDRVTITCRASQSISNYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSPPPTFGQGTKLEI | 14.02249 | 13.118835 | 122 | 106 | 122 | 106 | 122 | 106 | 42 | dh1042 heavy chain | dh1042 light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 48 | 22 | 0.85 | HL | train |
7tht_a_c | 7tht | cryoem structure of sars-cov-2 s protein in complex with receptor binding domain antibody dh1042 | no | viral protein/immune system | 2022-01-12 | 2022-02-16 | electron microscopy | 3.42 | N.A. | N.A. | 35447081 | 10.1016/j.molcel.2022.03.028 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | a | c | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGRVTITADKSTSTAYLELSSLRSEDTAVYYCARYMVTRDQYYYDMDVWGQGTTVTVS | DIQMTQSPSSLSASVGDRVTITCRASQSISNYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSPPPTFGQGTKLEI | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGRVTITADKSTSTAYLELSSLRSEDTAVYYCARYMVTRDQYYYDMDVWGQGTTVTVS | DIQMTQSPSSLSASVGDRVTITCRASQSISNYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSPPPTFGQGTKLEI | 14.150018 | 13.046771 | 122 | 106 | 122 | 106 | 122 | 106 | 44 | dh1042 heavy chain | dh1042 light chain | homo sapiens | homo sapiens | S;V | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 52;26 | 23;6 | 0.85;0.4 | HL | train |
7tht_d_b | 7tht | cryoem structure of sars-cov-2 s protein in complex with receptor binding domain antibody dh1042 | no | viral protein/immune system | 2022-01-12 | 2022-02-16 | electron microscopy | 3.42 | N.A. | N.A. | 35447081 | 10.1016/j.molcel.2022.03.028 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | d | b | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGRVTITADKSTSTAYLELSSLRSEDTAVYYCARYMVTRDQYYYDMDVWGQGTTVTVS | DIQMTQSPSSLSASVGDRVTITCRASQSISNYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSPPPTFGQGTKLEI | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGRVTITADKSTSTAYLELSSLRSEDTAVYYCARYMVTRDQYYYDMDVWGQGTTVTVS | DIQMTQSPSSLSASVGDRVTITCRASQSISNYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSPPPTFGQGTKLEI | 14.221204 | 13.210272 | 122 | 106 | 122 | 106 | 122 | 106 | 43 | dh1042 heavy chain | dh1042 light chain | homo sapiens | homo sapiens | V | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 50 | 22 | 0.85 | HL | train |
7wkx_B_D | 7wkx | il-17a in complex with the humanized antibody hb0017 | no | cytokine | 2022-01-12 | 2022-03-23 | x-ray diffraction | 2.81 | 0.254 | 0.205 | 35066019 | 10.1016/j.ijbiomac.2022.01.119 | 0 | auth_asym_id | FabH:FabL | IGHV7 | IGKV2 | B | D | QVQLVQSGSELKKPGASVKVSCKASEYIFTNYGMNWVKQAPGQGFEWMGWIDTNTGEPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTATYYCANYGWGYFDYWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVSA | DVVMTQTPPSLPVNPGEPASISCRSSQSLVHSNGYTYLHWYLQKPGQSPQLLIYKVSNHLSGVPDRFSGSGSGTDFTLKISWVEAEDVGVYFCSQSTHVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGSELKKPGASVKVSCKASEYIFTNYGMNWVKQAPGQGFEWMGWIDTNTGEPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTATYYCANYGWGYFDYWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVSA | DVVMTQTPPSLPVNPGEPASISCRSSQSLVHSNGYTYLHWYLQKPGQSPQLLIYKVSNHLSGVPDRFSGSGSGTDFTLKISWVEAEDVGVYFCSQSTHVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.017183 | 23.585653 | 217 | 219 | 212 | 216 | 217 | 216 | 86 | heavy chain of hb0017 fab | light chain of hb0017 fab | homo sapiens | homo sapiens | E | protein | interleukin-17a | homo sapiens | 36 | 15 | 0.79 | HL | train |
7wkx_A_C | 7wkx | il-17a in complex with the humanized antibody hb0017 | no | cytokine | 2022-01-12 | 2022-03-23 | x-ray diffraction | 2.81 | 0.254 | 0.205 | 35066019 | 10.1016/j.ijbiomac.2022.01.119 | 0 | auth_asym_id | FabH:FabL | IGHV7 | IGKV2 | A | C | QVQLVQSGSELKKPGASVKVSCKASEYIFTNYGMNWVKQAPGQGFEWMGWIDTNTGEPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTATYYCANYGWGYFDYWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVSA | DVVMTQTPPSLPVNPGEPASISCRSSQSLVHSNGYTYLHWYLQKPGQSPQLLIYKVSNHLSGVPDRFSGSGSGTDFTLKISWVEAEDVGVYFCSQSTHVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGSELKKPGASVKVSCKASEYIFTNYGMNWVKQAPGQGFEWMGWIDTNTGEPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTATYYCANYGWGYFDYWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVSA | DVVMTQTPPSLPVNPGEPASISCRSSQSLVHSNGYTYLHWYLQKPGQSPQLLIYKVSNHLSGVPDRFSGSGSGTDFTLKISWVEAEDVGVYFCSQSTHVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.95304 | 23.283808 | 217 | 219 | 217 | 218 | 217 | 218 | 85 | heavy chain of hb0017 fab | light chain of hb0017 fab | homo sapiens | homo sapiens | F | protein | interleukin-17a | homo sapiens | 43 | 16 | 0.73 | HL | train |
7ti6_H_L | 7ti6 | crystal structure of the wild-type least mutated common ancestor (lmca) of the hiv-targeting pct64 antibody lineage | no | immune system | 2022-01-12 | 2022-10-05 | x-ray diffraction | 2.64 | 0.253 | 0.229 | 36179689 | 10.1016/j.immuni.2022.09.001 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | H | L | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTGVETYDFWSGYDDHYYDYYFRDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | VHEIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTGVETYDFWSGYDDHYYDYYFRDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | VHEIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.644136 | 22.579588 | 238 | 216 | 231 | 215 | 238 | 215 | 99 | pct64_lmca fab heavy chain | pct64_lmca light chain (wild type) | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
7wlz_P_O | 7wlz | cryo-em structure of the omicron s in complex with 35b5 fab(1 down-, 1 up- and 1 invisible rbds) | yes | viral protein,immune system | 2022-01-14 | 2022-05-25 | electron microscopy | 2.98 | N.A. | N.A. | 35436443 | 10.1016/j.chom.2022.03.035 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV2 | P | O | QVQLLESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGVSWNSGTIGYADSVKGRFTISRDNAKNSLYLHMRSLRAEDTALYYCAKAVEMVRGLMGLGADPEYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLLESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGVSWNSGTIGYADSVKGRFTISRDNAKNSLYLHMRSLRAEDTALYYCAKAVEMVRGLMGLGADPEYGMDVWGQGTTVTVSS | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPFTFGPGTKVDI | 14.572875 | 13.699252 | 237 | 219 | 127 | 111 | 130 | 111 | 43 | heavy chain of 35b5 fab | light chain of 35b5 fab | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 54 | 16 | 0.53 | HL | train |
7qti_B_C | 7qti | sars-cov-2 s omicron spike b.1.1.529 - 3-p2g3 and 1-p5c3 fabs (global) | no | viral protein | 2022-01-14 | 2022-08-03 | electron microscopy | 3.04 | N.A. | N.A. | 35879526 | 10.1038/s41564-022-01198-6 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | B | C | EVQLVESGGGLVQPGRSLRLSCAASGFRFDDYALHWVRQAPEKGLEWVSGISWNSNNIGYAESVKGRFTISRDTAKKSLYLQMNDLRAEDTALYYCVKDRHYDSSGYFVNGFDIWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | DIQLTQSPSFLSASVGDRVTVTCRASQGISSYVAWYQQKAGKAPTLLIYTASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLHSYPVTFGQGTRLDIERTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGRSLRLSCAASGFRFDDYALHWVRQAPEKGLEWVSGISWNSNNIGYAESVKGRFTISRDTAKKSLYLQMNDLRAEDTALYYCVKDRHYDSSGYFVNGFDIWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | DIQLTQSPSFLSASVGDRVTVTCRASQGISSYVAWYQQKAGKAPTLLIYTASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLHSYPVTFGQGTRLDIERTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.898516 | 22.908203 | 228 | 214 | 228 | 214 | 228 | 214 | 94 | p2g3 heavy chain | p2g3 light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein,envelope glycoprotein | severe acute respiratory syndrome coronavirus 2 | 30 | 17 | 1 | HL | train |
7qti_F_E | 7qti | sars-cov-2 s omicron spike b.1.1.529 - 3-p2g3 and 1-p5c3 fabs (global) | no | viral protein | 2022-01-14 | 2022-08-03 | electron microscopy | 3.04 | N.A. | N.A. | 35879526 | 10.1038/s41564-022-01198-6 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | F | E | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSSAVQWVRQARGQRLEWIGWIVVGSGNTDYAQQFQERVTITRDMSTSTAYMELSSLGSEDTAVYYCAAPNCSGGSCYDGFDLWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | EIVLTQSPGTLSLSPGERATLSCRGSQSVRSSYLGWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWTFGQGTKVEIKGTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSSAVQWVRQARGQRLEWIGWIVVGSGNTDYAQQFQERVTITRDMSTSTAYMELSSLGSEDTAVYYCAAPNCSGGSCYDGFDLWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | EIVLTQSPGTLSLSPGERATLSCRGSQSVRSSYLGWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWTFGQGTKVEIKGTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.44944 | 23.000359 | 221 | 215 | 221 | 215 | 221 | 215 | 90 | p5c3 heavy chain | p5c3 light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein,envelope glycoprotein | severe acute respiratory syndrome coronavirus 2 | 37 | 18 | 0.86 | HL | train |
7qti_I_J | 7qti | sars-cov-2 s omicron spike b.1.1.529 - 3-p2g3 and 1-p5c3 fabs (global) | no | viral protein | 2022-01-14 | 2022-08-03 | electron microscopy | 3.04 | N.A. | N.A. | 35879526 | 10.1038/s41564-022-01198-6 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | I | J | EVQLVESGGGLVQPGRSLRLSCAASGFRFDDYALHWVRQAPEKGLEWVSGISWNSNNIGYAESVKGRFTISRDTAKKSLYLQMNDLRAEDTALYYCVKDRHYDSSGYFVNGFDIWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | DIQLTQSPSFLSASVGDRVTVTCRASQGISSYVAWYQQKAGKAPTLLIYTASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLHSYPVTFGQGTRLDIERTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGRSLRLSCAASGFRFDDYALHWVRQAPEKGLEWVSGISWNSNNIGYAESVKGRFTISRDTAKKSLYLQMNDLRAEDTALYYCVKDRHYDSSGYFVNGFDIWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | DIQLTQSPSFLSASVGDRVTVTCRASQGISSYVAWYQQKAGKAPTLLIYTASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLHSYPVTFGQGTRLDIERTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.995045 | 22.951517 | 228 | 214 | 228 | 214 | 228 | 214 | 100 | p2g3 heavy chain | p2g3 light chain | homo sapiens | homo sapiens | D | protein | spike glycoprotein,envelope glycoprotein | severe acute respiratory syndrome coronavirus 2 | 31 | 17 | 0.94 | HL | train |
7qti_G_H | 7qti | sars-cov-2 s omicron spike b.1.1.529 - 3-p2g3 and 1-p5c3 fabs (global) | no | viral protein | 2022-01-14 | 2022-08-03 | electron microscopy | 3.04 | N.A. | N.A. | 35879526 | 10.1038/s41564-022-01198-6 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | G | H | EVQLVESGGGLVQPGRSLRLSCAASGFRFDDYALHWVRQAPEKGLEWVSGISWNSNNIGYAESVKGRFTISRDTAKKSLYLQMNDLRAEDTALYYCVKDRHYDSSGYFVNGFDIWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | DIQLTQSPSFLSASVGDRVTVTCRASQGISSYVAWYQQKAGKAPTLLIYTASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLHSYPVTFGQGTRLDIERTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGRSLRLSCAASGFRFDDYALHWVRQAPEKGLEWVSGISWNSNNIGYAESVKGRFTISRDTAKKSLYLQMNDLRAEDTALYYCVKDRHYDSSGYFVNGFDIWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | DIQLTQSPSFLSASVGDRVTVTCRASQGISSYVAWYQQKAGKAPTLLIYTASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLHSYPVTFGQGTRLDIERTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.95709 | 22.97548 | 228 | 214 | 228 | 214 | 228 | 214 | 93 | p2g3 heavy chain | p2g3 light chain | homo sapiens | homo sapiens | K | protein | spike glycoprotein,envelope glycoprotein | severe acute respiratory syndrome coronavirus 2 | 28 | 16 | 1 | HL | train |
7qtj_B_C | 7qtj | sars-cov-2 s omicron spike b.1.1.529 - rbd up - 1-p2g3 and 1-p5c3 fabs (local) | no | viral protein | 2022-01-14 | 2022-08-03 | electron microscopy | 4.01 | N.A. | N.A. | 35879526 | 10.1038/s41564-022-01198-6 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | B | C | EVQLVESGGGLVQPGRSLRLSCAASGFRFDDYALHWVRQAPEKGLEWVSGISWNSNNIGYAESVKGRFTISRDTAKKSLYLQMNDLRAEDTALYYCVKDRHYDSSGYFVNGFDIWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | DIQLTQSPSFLSASVGDRVTVTCRASQGISSYVAWYQQKAGKAPTLLIYTASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLHSYPVTFGQGTRLDIERTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGRSLRLSCAASGFRFDDYALHWVRQAPEKGLEWVSGISWNSNNIGYAESVKGRFTISRDTAKKSLYLQMNDLRAEDTALYYCVKDRHYDSSGYFVNGFDIWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | DIQLTQSPSFLSASVGDRVTVTCRASQGISSYVAWYQQKAGKAPTLLIYTASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLHSYPVTFGQGTRLDIERTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 24.020494 | 22.919563 | 228 | 214 | 228 | 214 | 228 | 214 | 104 | p2g3 heavy chain | p2g3 light chain | homo sapiens | homo sapiens | A | protein | surface glycoprotein | severe acute respiratory syndrome coronavirus 2 | 33 | 17 | 0.94 | HL | train |
7qtj_F_E | 7qtj | sars-cov-2 s omicron spike b.1.1.529 - rbd up - 1-p2g3 and 1-p5c3 fabs (local) | no | viral protein | 2022-01-14 | 2022-08-03 | electron microscopy | 4.01 | N.A. | N.A. | 35879526 | 10.1038/s41564-022-01198-6 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | F | E | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSSAVQWVRQARGQRLEWIGWIVVGSGNTDYAQQFQERVTITRDMSTSTAYMELSSLGSEDTAVYYCAAPNCSGGSCYDGFDLWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | EIVLTQSPGTLSLSPGERATLSCRGSQSVRSSYLGWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWTFGQGTKVEIKGTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSSAVQWVRQARGQRLEWIGWIVVGSGNTDYAQQFQERVTITRDMSTSTAYMELSSLGSEDTAVYYCAAPNCSGGSCYDGFDLWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | EIVLTQSPGTLSLSPGERATLSCRGSQSVRSSYLGWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWTFGQGTKVEIKGTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.662384 | 23.249367 | 221 | 215 | 221 | 215 | 221 | 215 | 83 | p5c3 heavy chain | p5c3 light chain | homo sapiens | homo sapiens | A | protein | surface glycoprotein | severe acute respiratory syndrome coronavirus 2 | 32 | 14 | 0.78 | HL | train |
7qtk_B_C | 7qtk | sars-cov-2 s omicron spike b.1.1.529 - rbd down - 1-p2g3 fab (local) | no | viral protein | 2022-01-14 | 2022-08-03 | electron microscopy | 3.84 | N.A. | N.A. | 35879526 | 10.1038/s41564-022-01198-6 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | B | C | EVQLVESGGGLVQPGRSLRLSCAASGFRFDDYALHWVRQAPEKGLEWVSGISWNSNNIGYAESVKGRFTISRDTAKKSLYLQMNDLRAEDTALYYCVKDRHYDSSGYFVNGFDIWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | DIQLTQSPSFLSASVGDRVTVTCRASQGISSYVAWYQQKAGKAPTLLIYTASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLHSYPVTFGQGTRLDIERTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGRSLRLSCAASGFRFDDYALHWVRQAPEKGLEWVSGISWNSNNIGYAESVKGRFTISRDTAKKSLYLQMNDLRAEDTALYYCVKDRHYDSSGYFVNGFDIWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | DIQLTQSPSFLSASVGDRVTVTCRASQGISSYVAWYQQKAGKAPTLLIYTASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLHSYPVTFGQGTRLDIERTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 24.014381 | 22.970428 | 228 | 214 | 228 | 214 | 228 | 214 | 94 | p2g3 heavy chain | p2g3 light chain | homo sapiens | homo sapiens | D | protein | surface glycoprotein | severe acute respiratory syndrome coronavirus 2 | 32 | 17 | 1 | HL | train |
7wm0_H_L | 7wm0 | cryo-em structure of the omicron rbd in complex with 35b5 fab( local refinement of the rbd and 35b5 fab) | yes | viral protein,immune system | 2022-01-14 | 2022-08-17 | electron microscopy | 3.35 | N.A. | N.A. | N.A. | 10.1016/j.chom.2022.03.035 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV2 | H | L | QVQLLESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGVSWNSGTIGYADSVKGRFTISRDNAKNSLYLHMRSLRAEDTALYYCAKAVEMVRGLMGLGADPEYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLLESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQAPGKGLEWVSGVSWNSGTIGYADSVKGRFTISRDNAKNSLYLHMRSLRAEDTALYYCAKAVEMVRGLMGLGADPEYGMDVWGQGTTVTVSS | DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQALQTPFTFGPGTKVDI | 14.565368 | 13.699327 | 237 | 219 | 127 | 111 | 130 | 111 | 43 | light chain of 35b5 fab | heavy chain of 35b5 fab | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 56 | 16 | 0.53 | HL | train |
7qt4_A_B | 7qt4 | antibody fenab709 - fentanyl complex | no | immune system | 2022-01-14 | 2023-05-24 | x-ray diffraction | 2.32 | 0.248 | 0.209 | 36719797 | 10.1016/j.celrep.2023.112049 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | A | B | QVQLQQPGAELVKPGASVTVSCKSSGYTFTSYWVHWVKQRPGQGLEWIGRIHPSDSDTNYNQKFKGKATLTVDKSSTTAYIHLSSLTSEDSAVYYCAIEAITTVITTDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRGPTIK | DIVMTQSQKFMSTSVGDRVSVTCKASQNVGTNVAWYQQKPGQSPKALIYSASYRYSGVPDRFTGSGSGTDFTLTISNVQSEDLAEFFCQQYNNFPYTFGGGTQLEMKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | VQLQQPGAELVKPGASVTVSCKSSGYTFTSYWVHWVKQRPGQGLEWIGRIHPSDSDTNYNQKFKGKATLTVDKSSTTAYIHLSSLTSEDSAVYYCAIEAITTVITTDYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP | DIVMTQSQKFMSTSVGDRVSVTCKASQNVGTNVAWYQQKPGQSPKALIYSASYRYSGVPDRFTGSGSGTDFTLTISNVQSEDLAEFFCQQYNNFPYTFGGGTQLEMKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | 20.045578 | 23.32327 | 225 | 214 | 204 | 211 | 218 | 211 | 90 | antibody heavy chain | antibody light chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
7tjc_A | 7tjc | vhh chl-b2 in complex with chloramphenicol | no | immune system | 2022-01-16 | 2022-11-23 | x-ray diffraction | 1.35 | 0.235 | 0.2 | 36153664 | 10.1002/pro.4457 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | A | N.A. | QVQLVESGGGLVQAGGSLRLSCAASGRSFSTYAMGWFRQAPGKEREFVAAISWSHGITYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAADSIPYGDSRYRNPGYWGQGTQVTVSSGGLPETGGHHHHHH | N.A. | VQLVESGGGLVQAGGSLRLSCAASGRSFSTYAMGWFRQAPGKEREFVAAISWSHGITYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAADSIPYGDSRYRNPGYWGQGTQVTVSS | N.A. | 13.788347 | 0 | 138 | 0 | 123 | 0 | 123 | 0 | 0 | vhh-chl-b2 | N.A. | vicugna pacos | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7tjc_B | 7tjc | vhh chl-b2 in complex with chloramphenicol | no | immune system | 2022-01-16 | 2022-11-23 | x-ray diffraction | 1.35 | 0.235 | 0.2 | 36153664 | 10.1002/pro.4457 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLVESGGGLVQAGGSLRLSCAASGRSFSTYAMGWFRQAPGKEREFVAAISWSHGITYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAADSIPYGDSRYRNPGYWGQGTQVTVSSGGLPETGGHHHHHH | N.A. | VQLVESGGGLVQAGGSLRLSCAASGRSFSTYAMGWFRQAPGKEREFVAAISWSHGITYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAADSIPYGDSRYRNPGYWGQGTQVTVSS | N.A. | 13.818831 | 0 | 138 | 0 | 123 | 0 | 123 | 0 | 0 | vhh-chl-b2 | N.A. | vicugna pacos | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7qu1_A_B | 7qu1 | machupo virus gp1 glycoprotein in complex with fab fragment of antibody mac1 | no | immune system | 2022-01-17 | 2022-02-09 | x-ray diffraction | 1.91 | 0.229 | 0.194 | 35315691 | 10.1128/mbio.02650-21 | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGKV1 | A | B | ETGQVQLQQSGAELVKPGASVKISCKASGYAFGSHWMNWVKQRPGKGLEWIGQIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQFSSLTSEDSAVYFCARDDYGTRYYFDYWGQGTTLTVSSATTKGPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVPRDCGTKHHHHHH | ETGDIQMTQTTSSLSASLGDRVSISCRASQDINNYLNWYQQKPDGTVKLLIHYTSRLRSGVPSRFSGSGFGTDYSLTITNLEQEDIATYFCQQGKTLPLTFGAGTKLEIKRTDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | GQVQLQQSGAELVKPGASVKISCKASGYAFGSHWMNWVKQRPGKGLEWIGQIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQFSSLTSEDSAVYFCARDDYGTRYYFDYWGQGTTLTVSSATTKGPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVPRD | TGDIQMTQTTSSLSASLGDRVSISCRASQDINNYLNWYQQKPDGTVKLLIHYTSRLRSGVPSRFSGSGFGTDYSLTITNLEQEDIATYFCQQGKTLPLTFGAGTKLEIKRTDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE | 22.013453 | 23.688131 | 234 | 217 | 222 | 215 | 222 | 215 | 101 | fab mac1 heavy chain | fab mac1 light chain | mus musculus | mus musculus | C | protein | pre-glycoprotein polyprotein gp complex | machupo mammarenavirus | 24 | 13 | 0.93 | HL | train |
7qu2_A_B | 7qu2 | junin virus gp1 glycoprotein in complex with fab fragment of antibody jun1 | no | immune system | 2022-01-17 | 2022-02-09 | x-ray diffraction | 2.5 | 0.254 | 0.223 | 35315691 | 10.1128/mbio.02650-21 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | A | B | ETGQIQLVQSVETGGGLVRPGNSLKLSCVTSGFTFSNYQMHWLRQPPGKRLEWIAVITVKSDNYGANYVESVKGRFAISRDDSKSSVYLEMNRLREEDTATYFCSRSGIYDGYYAYAMDYWGQGTSVTVSSATTKGPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVPRDCGTKHHHHHH | ETGSVVMTQSQKFMSTSVGDRVSITCKASQIVGTSVAWYQQKAGQSPKLLIYWASTRHTGVPDRFTAGGSGTDFTLTITNVQSEDLADYFCQQYATYPLTFGSGTKLELKRTDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | QIQLVQSVETGGGLVRPGNSLKLSCVTSGFTFSNYQMHWLRQPPGKRLEWIAVITVKSDNYGANYVESVKGRFAISRDDSKSSVYLEMNRLREEDTATYFCSRSGIYDGYYAYAMDYWGQGTSVTVSSATTKGPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVPRDC | GSVVMTQSQKFMSTSVGDRVSITCKASQIVGTSVAWYQQKAGQSPKLLIYWASTRHTGVPDRFTAGGSGTDFTLTITNVQSEDLADYFCQQYATYPLTFGSGTKLELKRTDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE | 23.141567 | 23.330236 | 242 | 217 | 230 | 214 | 230 | 214 | 104 | fab jun1 heavy chain | fab jun1 light chain | mus musculus | mus musculus | C | protein | glycoprotein g1 | argentinian mammarenavirus | 44 | 21 | 0.84 | HL | train |
7tl0_D_E | 7tl0 | cryo-em structure of hmpv pref bound by fabs mpe8 and san32-2 | yes | viral protein/immune system | 2022-01-17 | 2022-09-14 | electron microscopy | 3.06 | N.A. | N.A. | 36130517 | 10.1016/j.celrep.2022.111399 | 0 | auth_asym_id | VH:VL | IGHV5 | IGKV1 | D | E | EVQLVQSGAEVKKPGESLRISCKSSGYTFTTYWITWVRQMPGKGLEWMGRIDPSDSYTDYSPSFKGHVTISVDKSINTAYLQWGSLKSSDTAIFYCARQASSGKIYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | DIQMTQSPSSLSASVGDRVTITCQASQGINYYLNWYQQKPGKAPKVLIYDASDLETGVPSRFSGGGSGTHFTFTISSLQTEDIGTYYCQQYDNLPFTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGAEVKKPGESLRISCKSSGYTFTTYWITWVRQMPGKGLEWMGRIDPSDSYTDYSPSFKGHVTISVDKSINTAYLQWGSLKSSDTAIFYCARQASSGKIYFDYWGQGTLVTVSS | DIQMTQSPSSLSASVGDRVTITCQASQGINYYLNWYQQKPGKAPKVLIYDASDLETGVPSRFSGGGSGTHFTFTISSLQTEDIGTYYCQQYDNLPFTFGQGTRLE | 13.555282 | 12.815186 | 224 | 214 | 120 | 105 | 120 | 105 | 48 | san32-2 fab heavy chain | san32-2 fab light chain | homo sapiens | homo sapiens | A | protein | fusion glycoprotein f0 | human metapneumovirus | 39 | 20 | 0.91 | HL | train |
7tl0_J_K | 7tl0 | cryo-em structure of hmpv pref bound by fabs mpe8 and san32-2 | yes | viral protein/immune system | 2022-01-17 | 2022-09-14 | electron microscopy | 3.06 | N.A. | N.A. | 36130517 | 10.1016/j.celrep.2022.111399 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV1 | J | K | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISASSSYSDYADSAKGRFTISRDNAKTSLFLQMNSLRAEDTAIYFCARARATGYSSITPYFDIWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | QSVVTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYDNNNRPSGVPDRFSASKSGTSASLAITGLQAEDEADYYCQSYDRSLSGVFGTGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISASSSYSDYADSAKGRFTISRDNAKTSLFLQMNSLRAEDTAIYFCARARATGYSSITPYFDIWGQGTLVTVSS | VVTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYDNNNRPSGVPDRFSASKSGTSASLAITGLQAEDEADYYCQSYDRSLSGVFGTGTKVTV | 14.054026 | 12.958177 | 228 | 216 | 124 | 107 | 124 | 107 | 44 | mpe8 fab heavy chain | mpe8 fab light chain | homo sapiens | homo sapiens | A;B | protein;protein | fusion glycoprotein f0;fusion glycoprotein f0 | human metapneumovirus;human metapneumovirus | 54;22 | 21;9 | 0.81;0.9 | HL | train |
7tl0_N_O | 7tl0 | cryo-em structure of hmpv pref bound by fabs mpe8 and san32-2 | yes | viral protein/immune system | 2022-01-17 | 2022-09-14 | electron microscopy | 3.06 | N.A. | N.A. | 36130517 | 10.1016/j.celrep.2022.111399 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV1 | N | O | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISASSSYSDYADSAKGRFTISRDNAKTSLFLQMNSLRAEDTAIYFCARARATGYSSITPYFDIWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | QSVVTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYDNNNRPSGVPDRFSASKSGTSASLAITGLQAEDEADYYCQSYDRSLSGVFGTGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISASSSYSDYADSAKGRFTISRDNAKTSLFLQMNSLRAEDTAIYFCARARATGYSSITPYFDIWGQGTLVTVSS | VVTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYDNNNRPSGVPDRFSASKSGTSASLAITGLQAEDEADYYCQSYDRSLSGVFGTGTKVTV | 14.061286 | 12.947454 | 228 | 216 | 124 | 107 | 124 | 107 | 45 | mpe8 fab heavy chain | mpe8 fab light chain | homo sapiens | homo sapiens | A;C | protein;protein | fusion glycoprotein f0;fusion glycoprotein f0 | human metapneumovirus;human metapneumovirus | 22;54 | 9;21 | 0.9;0.81 | HL | train |
7tl0_F_G | 7tl0 | cryo-em structure of hmpv pref bound by fabs mpe8 and san32-2 | yes | viral protein/immune system | 2022-01-17 | 2022-09-14 | electron microscopy | 3.06 | N.A. | N.A. | 36130517 | 10.1016/j.celrep.2022.111399 | 0 | auth_asym_id | VH:VL | IGHV5 | IGKV1 | F | G | EVQLVQSGAEVKKPGESLRISCKSSGYTFTTYWITWVRQMPGKGLEWMGRIDPSDSYTDYSPSFKGHVTISVDKSINTAYLQWGSLKSSDTAIFYCARQASSGKIYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | DIQMTQSPSSLSASVGDRVTITCQASQGINYYLNWYQQKPGKAPKVLIYDASDLETGVPSRFSGGGSGTHFTFTISSLQTEDIGTYYCQQYDNLPFTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGAEVKKPGESLRISCKSSGYTFTTYWITWVRQMPGKGLEWMGRIDPSDSYTDYSPSFKGHVTISVDKSINTAYLQWGSLKSSDTAIFYCARQASSGKIYFDYWGQGTLVTVSS | DIQMTQSPSSLSASVGDRVTITCQASQGINYYLNWYQQKPGKAPKVLIYDASDLETGVPSRFSGGGSGTHFTFTISSLQTEDIGTYYCQQYDNLPFTFGQGTRLE | 13.582011 | 12.820168 | 224 | 214 | 120 | 105 | 120 | 105 | 43 | san32-2 fab heavy chain | san32-2 fab light chain | homo sapiens | homo sapiens | B | protein | fusion glycoprotein f0 | human metapneumovirus | 39 | 21 | 0.88 | HL | train |
7tl0_L_M | 7tl0 | cryo-em structure of hmpv pref bound by fabs mpe8 and san32-2 | yes | viral protein/immune system | 2022-01-17 | 2022-09-14 | electron microscopy | 3.06 | N.A. | N.A. | 36130517 | 10.1016/j.celrep.2022.111399 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV1 | L | M | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISASSSYSDYADSAKGRFTISRDNAKTSLFLQMNSLRAEDTAIYFCARARATGYSSITPYFDIWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | QSVVTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYDNNNRPSGVPDRFSASKSGTSASLAITGLQAEDEADYYCQSYDRSLSGVFGTGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSSYSMNWVRQAPGKGLEWVSSISASSSYSDYADSAKGRFTISRDNAKTSLFLQMNSLRAEDTAIYFCARARATGYSSITPYFDIWGQGTLVTVSS | VVTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYDNNNRPSGVPDRFSASKSGTSASLAITGLQAEDEADYYCQSYDRSLSGVFGTGTKVTV | 14.063106 | 12.958696 | 228 | 216 | 124 | 107 | 124 | 107 | 46 | mpe8 fab heavy chain | mpe8 fab light chain | homo sapiens | homo sapiens | B;C | protein;protein | fusion glycoprotein f0;fusion glycoprotein f0 | human metapneumovirus;human metapneumovirus | 56;22 | 21;9 | 0.75;0.9 | HL | train |
7tl0_H_I | 7tl0 | cryo-em structure of hmpv pref bound by fabs mpe8 and san32-2 | yes | viral protein/immune system | 2022-01-17 | 2022-09-14 | electron microscopy | 3.06 | N.A. | N.A. | 36130517 | 10.1016/j.celrep.2022.111399 | 0 | auth_asym_id | VH:VL | IGHV5 | IGKV1 | H | I | EVQLVQSGAEVKKPGESLRISCKSSGYTFTTYWITWVRQMPGKGLEWMGRIDPSDSYTDYSPSFKGHVTISVDKSINTAYLQWGSLKSSDTAIFYCARQASSGKIYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | DIQMTQSPSSLSASVGDRVTITCQASQGINYYLNWYQQKPGKAPKVLIYDASDLETGVPSRFSGGGSGTHFTFTISSLQTEDIGTYYCQQYDNLPFTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGAEVKKPGESLRISCKSSGYTFTTYWITWVRQMPGKGLEWMGRIDPSDSYTDYSPSFKGHVTISVDKSINTAYLQWGSLKSSDTAIFYCARQASSGKIYFDYWGQGTLVTVSS | DIQMTQSPSSLSASVGDRVTITCQASQGINYYLNWYQQKPGKAPKVLIYDASDLETGVPSRFSGGGSGTHFTFTISSLQTEDIGTYYCQQYDNLPFTFGQGTRLE | 13.580125 | 12.79999 | 224 | 214 | 120 | 105 | 120 | 105 | 41 | san32-2 fab heavy chain | san32-2 fab light chain | homo sapiens | homo sapiens | C | protein | fusion glycoprotein f0 | human metapneumovirus | 38 | 18 | 0.82 | HL | train |
7wn8_H_L | 7wn8 | crystal structure of antibody (bc31m5) binds to cd47 | yes | antitumor protein | 2022-01-17 | 2023-01-25 | x-ray diffraction | 2.8 | 0.276 | 0.243 | 36650558 | 10.1186/s13045-023-01399-4 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | H | L | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARGTVYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSCDKTHTHHHHHH | EIVLTQSPATLSLSPGERATLSCRASQSLSRNHLAWYQQKPGQPPRLLIHWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQHTQNTWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARGTVYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKA | EIVLTQSPATLSLSPGERATLSCRASQSLSRNHLAWYQQKPGQPPRLLIHWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQHTQNTWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 21.147142 | 23.273903 | 230 | 215 | 207 | 214 | 214 | 214 | 91 | bc31m5 fab heavy chain | bc31m5 fab light chain | homo sapiens | homo sapiens | A | protein | leukocyte surface antigen cd47 | homo sapiens | 45 | 18 | 0.82 | HL | train |
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