PDB_ID_chain
stringlengths
6
10
PDB_ID
stringlengths
4
4
Title
stringlengths
4
230
Mutation(s)
stringclasses
2 values
Classification
stringclasses
305 values
Deposit_date
stringdate
1976-03-17 00:00:00
2026-01-20 00:00:00
Release_date
stringdate
1976-05-19 00:00:00
2026-02-25 00:00:00
Method
stringclasses
5 values
Resolution
stringclasses
459 values
R_free
stringclasses
227 values
R_work
stringclasses
211 values
PMID
stringlengths
4
8
DOI
stringlengths
4
68
Model_index
int64
0
76
Asym_ID_type
stringclasses
2 values
Ab_type
stringclasses
30 values
H_subgroup
stringclasses
8 values
L_subgroup
stringclasses
19 values
H_chain_ID
stringclasses
60 values
L_chain_ID
stringclasses
58 values
H_fas_seq
stringlengths
4
919
L_fas_seq
stringlengths
4
627
H_filled_pdb_seq
stringlengths
4
896
L_filled_pdb_seq
stringlengths
4
523
H_mean_radius
float64
0
79.7
L_mean_radius
float64
0
84.3
H_fas_seq_len
int64
0
919
L_fas_seq_len
int64
0
627
H_pdb_seq_len
int64
0
879
L_pdb_seq_len
int64
0
523
H_filled_seq_len
int64
0
896
L_filled_seq_len
int64
0
523
HL_inf_res_num
int64
0
175
H_mol_name
stringlengths
2
331
L_mol_name
stringlengths
2
151
H_species
stringclasses
68 values
L_species
stringclasses
42 values
Ag_chain_ID(s)
stringclasses
279 values
Ag_type(s)
stringclasses
16 values
Ag_mol_name(s)
stringlengths
2
390
Ag_species
stringclasses
743 values
Ab_ag_inf_res_num
stringlengths
1
11
CDR_inf_res_num
stringclasses
444 values
CDR_inf_res_ratio
stringlengths
1
19
hl_label
stringclasses
3 values
split
stringclasses
1 value
7ubs_H
7ubs
pfs230 d1 domain in complex with 230as-26
no
cell invasion
2022-03-15
2023-02-15
x-ray diffraction
2.5
0.25
0.209
36792576
10.1016/j.immuni.2023.01.012
0
auth_asym_id
scFv
N.A.
N.A.
H
N.A.
TGQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISGYNGNTKYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDKYIPVADPFDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSDIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSAPITFGQGTRLEIKGTHHHHHH
N.A.
QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISGYNGNTKYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDKYIPVADPFDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSDIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSAPITFGQGTRLEI
N.A.
17.561317
0
264
0
232
0
253
0
0
230as-26
N.A.
homo sapiens
N.A.
A
protein
gametocyte surface protein p230
plasmodium falciparum
52
25
0.96
H_only
train
7ubs_I
7ubs
pfs230 d1 domain in complex with 230as-26
no
cell invasion
2022-03-15
2023-02-15
x-ray diffraction
2.5
0.25
0.209
36792576
10.1016/j.immuni.2023.01.012
0
auth_asym_id
scFv
N.A.
N.A.
I
N.A.
TGQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISGYNGNTKYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDKYIPVADPFDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSDIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSAPITFGQGTRLEIKGTHHHHHH
N.A.
QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISGYNGNTKYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDKYIPVADPFDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSDIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSAPITFGQGTRLEIK
N.A.
17.601444
0
264
0
233
0
254
0
0
230as-26
N.A.
homo sapiens
N.A.
B
protein
gametocyte surface protein p230
plasmodium falciparum
53
23
0.96
H_only
train
7ubs_J
7ubs
pfs230 d1 domain in complex with 230as-26
no
cell invasion
2022-03-15
2023-02-15
x-ray diffraction
2.5
0.25
0.209
36792576
10.1016/j.immuni.2023.01.012
0
auth_asym_id
scFv
N.A.
N.A.
J
N.A.
TGQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISGYNGNTKYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDKYIPVADPFDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSDIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSAPITFGQGTRLEIKGTHHHHHH
N.A.
QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISGYNGNTKYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDKYIPVADPFDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSDIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSAPITFGQGTRLEIK
N.A.
17.541529
0
264
0
233
0
254
0
0
230as-26
N.A.
homo sapiens
N.A.
C
protein
gametocyte surface protein p230
plasmodium falciparum
53
26
0.96
H_only
train
7ubs_K
7ubs
pfs230 d1 domain in complex with 230as-26
no
cell invasion
2022-03-15
2023-02-15
x-ray diffraction
2.5
0.25
0.209
36792576
10.1016/j.immuni.2023.01.012
0
auth_asym_id
scFv
N.A.
N.A.
K
N.A.
TGQVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISGYNGNTKYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDKYIPVADPFDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSDIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSAPITFGQGTRLEIKGTHHHHHH
N.A.
QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYGISWVRQAPGQGLEWMGWISGYNGNTKYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYYCARDKYIPVADPFDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSDIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSAPITFGQGTRLEIK
N.A.
17.609594
0
264
0
233
0
254
0
0
230as-26
N.A.
homo sapiens
N.A.
D
protein
gametocyte surface protein p230
plasmodium falciparum
55
26
0.93
H_only
train
7x93_E_F
7x93
the sars-cov-2 receptor binding domain bound with the fab fragment of a human neutralizing antibody ab765
yes
viral protein
2022-03-15
2023-03-22
electron microscopy
3.3
N.A.
N.A.
37288342
10.1016/j.isci.2023.106955
0
auth_asym_id
VH:VL
IGHV3
IGLV2
E
F
MDPKGSLSWRILLFLSLAFELSYGQVQLVESGGGVVQPGRSLRLSCAASGFTFSDYAIHWVRQAPGRGLEPVALISYDGNNKYYADSVKGRFTISRDNSKNVLYLQMNSLRADDTAVYYCARDAEGGWVAALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCENLYFQGHHHHHH
MDPKGSLSWRILLFLSLAFELSYGQSALTQPRSVSGSPGQSVTISCTGTSSDVGGYNYVSWYQHHPGKAPKVMIYEVSKRPSGVPDRFSGSKSGTTASLTISGLQAEDEADYYCCSYAGTYPYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVESGGGVVQPGRSLRLSCAASGFTFSDYAIHWVRQAPGRGLEPVALISYDGNNKYYADSVKGRFTISRDNSKNVLYLQMNSLRADDTAVYYCARDAEGGWVAALDYWGQGTLVTV
SALTQPRSVSGSPGQSVTISCTGTSSDVGGYNYVSWYQHHPGKAPKVMIYEVSKRPSGVPDRFSGSKSGTTASLTISGLQAEDEADYYCCSYAGTYPYVFGTGTKVTVLG
13.764924
13.385546
261
240
119
110
119
110
43
ab765 heavy chain
ab765 light chain
homo sapiens
homo sapiens
D;G
protein;protein
spike glycoprotein;spike glycoprotein
severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2
12;30
5;15
0.62;0.88
HL
train
7x94_H_L
7x94
the sars-cov-2 receptor binding domain bound with the fab fragment of a human neutralizing antibody ab712
yes
viral protein
2022-03-15
2023-03-22
electron microscopy
4
N.A.
N.A.
37288342
10.1016/j.isci.2023.106955
0
auth_asym_id
VH:VL
IGHV7
IGLV3
H
L
MDPKGSLSWRILLFLSLAFELSYGQVQLVQSGSELKKPGASVKISCKASGYTFINHAINWVRQAPGQGLEWMGWINTNTGNPTYAPGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARIPIRDYDYDGSGYYYFLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCENLYFQGHHHHHH
MDPKGSLSWRILLFLSLAFELSYGSYELTQDPAVSVALGQTVRITCQGDSLRSSSASWYQQKPGQAPVLVIYGKTNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDNSGNHPVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVQSGSELKKPGASVKISCKASGYTFINHAINWVRQAPGQGLEWMGWINTNTGNPTYAPGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARIPIRDYDYDGSGYYYFLDYWGQGTLVTVS
SYELTQDPAVSVALGQTVRITCQGDSLRSSSASWYQQKPGQAPVLVIYGKTNRPSGIPDRFSGSSSGNTASLTITGAQAEDEADYYCNSRDNSGNHPVVFGGGTKLTVL
14.358513
13.649671
268
239
127
109
127
109
46
ab712 heavy chain
ab712 light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
54
23
0.79
HL
train
7x95_H_L
7x95
the sars-cov-2 receptor binding domain bound with the fab fragment of a human neutralizing antibody ab709
yes
viral protein
2022-03-15
2023-03-22
electron microscopy
3.9
N.A.
N.A.
37288342
10.1016/j.isci.2023.106955
0
auth_asym_id
VH:VL
IGHV3
IGLV1
H
L
MDPKGSLSWRILLFLSLAFELSYGQVQLVESGGGVVQPGKSLRLSCAASGFTFSSYAMHWVRLAPGKGLEWVAVISPDGKNKYYVDSVKGRSTISRDNSKNTLYLLMNSLRAEDTAVYYCATTQSLWFGQFYYIYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCENLYFQGHHHHHH
MDPKGSLSWRILLFLSLAFELSYGQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNFVYWYQHFPGAAPKLLIYRNTLRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLFWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLVESGGGVVQPGKSLRLSCAASGFTFSSYAMHWVRLAPGKGLEWVAVISPDGKNKYYVDSVKGRSTISRDNSKNTLYLLMNSLRAEDTAVYYCATTQSLWFGQFYYIYGMDVWGQGTTVTV
SVLTQPPSASGTPGQRVTISCSGSSSNIGSNFVYWYQHFPGAAPKLLIYRNTLRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLFWVFGGGTKLTV
13.903023
13.319906
266
239
123
107
123
107
41
ab709 heavy chain
ab709 light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
49
18
0.75
HL
train
7x96_H_L
7x96
the sars-cov-2 receptor binding domain bound with the fab fragment of a human neutralizing antibody ab847
yes
viral protein
2022-03-15
2023-03-22
electron microscopy
3.4
N.A.
N.A.
37288342
10.1016/j.isci.2023.106955
0
auth_asym_id
VH:VL
IGHV1
IGKV1
H
L
MDPKGSLSWRILLFLSLAFELSYGLEEVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDIIWVRQATGQGLEWMGWMDPSRGTTGYAQTFQGRVTMTRDTSISTAYLELNSLTSEDTAVYYCVAHIVVLDRWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCENLYFQGHHHHHH
MDPKGSLSWRILLFLSLAFELSYGLEDIVMTQSPSSLSASVGDRVTITCQASQDIGNFLNWCQQKPGQAPKVLIYGASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQHYDNFPPRFTFGQGTKLDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVQSGAEVKKPGASVKVSCKASGYTFTSYDIIWVRQATGQGLEWMGWMDPSRGTTGYAQTFQGRVTMTRDTSISTAYLELNSLTSEDTAVYYCVAHIVVLDRWFDPWGQGTLVTVSS
DIVMTQSPSSLSASVGDRVTITCQASQDIGNFLNWCQQKPGQAPKVLIYGASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQHYDNFPPRFTFGQGTKLDIK
14.154167
13.598113
262
242
120
109
120
109
39
ab847 heavy chain
ab847 light chain
homo sapiens
homo sapiens
G
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
44
18
0.82
HL
train
7z85_D
7z85
cryo-em structure of sars-cov-2 spike : h11-b5 nanobody complex
yes
antiviral protein
2022-03-16
2022-07-13
electron microscopy
3.1
N.A.
N.A.
35858383
10.1073/pnas.2205412119
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
QVQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCASYQATRSLLSDYATWPYDYWGQGTQVTVSSKHHHHHH
N.A.
VQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCASYQATRSLLSDYATWPYDYWGQGTQVTVS
N.A.
13.635061
0
134
0
125
0
125
0
0
nanobody h11-b5
N.A.
lama glama
N.A.
A
protein
spike glycoprotein,fibritin
severe acute respiratory syndrome coronavirus 2
33
15
1
H_only
train
7z85_E
7z85
cryo-em structure of sars-cov-2 spike : h11-b5 nanobody complex
yes
antiviral protein
2022-03-16
2022-07-13
electron microscopy
3.1
N.A.
N.A.
35858383
10.1073/pnas.2205412119
0
auth_asym_id
VHH
IGHV3
N.A.
E
N.A.
QVQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCASYQATRSLLSDYATWPYDYWGQGTQVTVSSKHHHHHH
N.A.
VQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCASYQATRSLLSDYATWPYDYWGQGTQVTVS
N.A.
13.726753
0
134
0
125
0
125
0
0
nanobody h11-b5
N.A.
lama glama
N.A.
B
protein
spike glycoprotein,fibritin
severe acute respiratory syndrome coronavirus 2
36
16
0.94
H_only
train
7z85_F
7z85
cryo-em structure of sars-cov-2 spike : h11-b5 nanobody complex
yes
antiviral protein
2022-03-16
2022-07-13
electron microscopy
3.1
N.A.
N.A.
35858383
10.1073/pnas.2205412119
0
auth_asym_id
VHH
IGHV3
N.A.
F
N.A.
QVQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCASYQATRSLLSDYATWPYDYWGQGTQVTVSSKHHHHHH
N.A.
VQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCASYQATRSLLSDYATWPYDYWGQGTQVTVS
N.A.
13.77021
0
134
0
125
0
125
0
0
nanobody h11-b5
N.A.
lama glama
N.A.
C
protein
spike glycoprotein,fibritin
severe acute respiratory syndrome coronavirus 2
34
15
0.94
H_only
train
7uce_H_L
7uce
structure of the anti-hiv-1 neutralizing antibody bg24 fab fragment
no
viral protein/immune system
2022-03-16
2022-08-17
x-ray diffraction
2.25
0.245
0.204
35960796
10.1126/sciadv.abp8155
0
auth_asym_id
FabH:FabL
IGHV1
IGLV2
H
L
QVQLVQSRAEVKKPGASVKVSCEASGYNFVDHYIHWVRQAPGQRPQWVGWMNPRGGGVNYAQRFQGRVTMTRDTSIDTAYMQLNRLTSGDTAVYYCATQVKLDSSAGYPFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH
QSALTQPRSVSGSPGQSVNISCTGAYSGLGWYQQHPGRAPKLIIYEVNRRPSGVSDRFSGSKSGNTASLTISGLRTEDEADYFCSAFEYFGEGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS
QVQLVQSRAEVKKPGASVKVSCEASGYNFVDHYIHWVRQAPGQRPQWVGWMNPRGGGVNYAQRFQGRVTMTRDTSIDTAYMQLNRLTSGDTAVYYCATQVKLDSSAGYPFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
SALTQPRSVSGSPGQSVNISCTGAYSGLGWYQQHPGRAPKLIIYEVNRRPSGVSDRFSGSKSGNTASLTISGLRTEDEADYFCSAFEYFGEGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPT
24.501965
21.822054
234
205
225
201
225
201
90
bg24 fab heavy chain
bg24 fab light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7ucg_D_E
7ucg
structure of the du422 sosip.664 trimer in complex with neutralizing antibody fab fragments 10-1074 and bg24
no
viral protein/immune system
2022-03-16
2022-08-17
electron microscopy
3.5
N.A.
N.A.
35960796
10.1126/sciadv.abp8155
0
auth_asym_id
VH:VL
IGHV1
IGLV2
D
E
QVQLVQSRAEVKKPGASVKVSCEASGYNFVDHYIHWVRQAPGQRPQWVGWMNPQWGQVNYARTFQGRVTMTRDTSIDTAYMQLNRLTSGDTAVYYCATQVKLDSSAGYPFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH
QSALTQPRSVSGSPGQSVNISCTGAYSGLGWYQQHPGRAPKLIIYEVNRRPSGVSDRFSGSKSGNTASLTISGLRTEDEADYFCSAFEYFGEGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVQSRAEVKKPGASVKVSCEASGYNFVDHYIHWVRQAPGQRPQWVGWMNPQWGQVNYARTFQGRVTMTRDTSIDTAYMQLNRLTSGDTAVYYCATQVKLDSSAGYPFDIWGQGTMVTV
ALTQPRSVSGSPGQSVNISCTGAYSGLGWYQQHPGRAPKLIIYEVNRRPSGVSDRFSGSKSGNTASLTISGLRTEDEADYFCSAFEYFGEGTKLTVL
13.905806
12.555638
234
205
121
97
121
97
41
bg24 cdrh2-v2 fab heavy chain
bg24 light chain
homo sapiens
homo sapiens
G
protein
envelope glycoprotein gp160
human immunodeficiency virus 1
54
14
0.61
HL
train
7ucg_H_L
7ucg
structure of the du422 sosip.664 trimer in complex with neutralizing antibody fab fragments 10-1074 and bg24
no
viral protein/immune system
2022-03-16
2022-08-17
electron microscopy
3.5
N.A.
N.A.
35960796
10.1126/sciadv.abp8155
0
auth_asym_id
VH:VL
IGHV4
IGLV3
H
L
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH
SYVRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLGQPKAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVT
VRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTV
15.794026
13.49674
243
216
128
105
128
105
52
10-1074 fab heavy chain
10-1074 light chain
homo sapiens
homo sapiens
G
protein
envelope glycoprotein gp160
human immunodeficiency virus 1
26
10
0.91
HL
train
7ucg_C_F
7ucg
structure of the du422 sosip.664 trimer in complex with neutralizing antibody fab fragments 10-1074 and bg24
no
viral protein/immune system
2022-03-16
2022-08-17
electron microscopy
3.5
N.A.
N.A.
35960796
10.1126/sciadv.abp8155
0
auth_asym_id
VH:VL
IGHV1
IGLV2
C
F
QVQLVQSRAEVKKPGASVKVSCEASGYNFVDHYIHWVRQAPGQRPQWVGWMNPQWGQVNYARTFQGRVTMTRDTSIDTAYMQLNRLTSGDTAVYYCATQVKLDSSAGYPFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH
QSALTQPRSVSGSPGQSVNISCTGAYSGLGWYQQHPGRAPKLIIYEVNRRPSGVSDRFSGSKSGNTASLTISGLRTEDEADYFCSAFEYFGEGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVQSRAEVKKPGASVKVSCEASGYNFVDHYIHWVRQAPGQRPQWVGWMNPQWGQVNYARTFQGRVTMTRDTSIDTAYMQLNRLTSGDTAVYYCATQVKLDSSAGYPFDIWGQGTMVTV
ALTQPRSVSGSPGQSVNISCTGAYSGLGWYQQHPGRAPKLIIYEVNRRPSGVSDRFSGSKSGNTASLTISGLRTEDEADYFCSAFEYFGEGTKLTVL
13.913055
12.561687
234
205
121
97
121
97
40
bg24 cdrh2-v2 fab heavy chain
bg24 light chain
homo sapiens
homo sapiens
I
protein
envelope glycoprotein gp160
human immunodeficiency virus 1
55
14
0.61
HL
train
7ucg_J_K
7ucg
structure of the du422 sosip.664 trimer in complex with neutralizing antibody fab fragments 10-1074 and bg24
no
viral protein/immune system
2022-03-16
2022-08-17
electron microscopy
3.5
N.A.
N.A.
35960796
10.1126/sciadv.abp8155
0
auth_asym_id
VH:VL
IGHV4
IGLV3
J
K
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH
SYVRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLGQPKAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVT
VRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTV
15.83367
13.463103
243
216
128
105
128
105
51
10-1074 fab heavy chain
10-1074 light chain
homo sapiens
homo sapiens
I
protein
envelope glycoprotein gp160
human immunodeficiency virus 1
26
11
0.92
HL
train
7ucg_N_O
7ucg
structure of the du422 sosip.664 trimer in complex with neutralizing antibody fab fragments 10-1074 and bg24
no
viral protein/immune system
2022-03-16
2022-08-17
electron microscopy
3.5
N.A.
N.A.
35960796
10.1126/sciadv.abp8155
0
auth_asym_id
VH:VL
IGHV1
IGLV2
N
O
QVQLVQSRAEVKKPGASVKVSCEASGYNFVDHYIHWVRQAPGQRPQWVGWMNPQWGQVNYARTFQGRVTMTRDTSIDTAYMQLNRLTSGDTAVYYCATQVKLDSSAGYPFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH
QSALTQPRSVSGSPGQSVNISCTGAYSGLGWYQQHPGRAPKLIIYEVNRRPSGVSDRFSGSKSGNTASLTISGLRTEDEADYFCSAFEYFGEGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVQSRAEVKKPGASVKVSCEASGYNFVDHYIHWVRQAPGQRPQWVGWMNPQWGQVNYARTFQGRVTMTRDTSIDTAYMQLNRLTSGDTAVYYCATQVKLDSSAGYPFDIWGQGTMVTV
ALTQPRSVSGSPGQSVNISCTGAYSGLGWYQQHPGRAPKLIIYEVNRRPSGVSDRFSGSKSGNTASLTISGLRTEDEADYFCSAFEYFGEGTKLTVL
13.917684
12.565985
234
205
121
97
121
97
39
bg24 cdrh2-v2 fab heavy chain
bg24 light chain
homo sapiens
homo sapiens
P
protein
envelope glycoprotein gp160
human immunodeficiency virus 1
53
14
0.61
HL
train
7ucg_Q_R
7ucg
structure of the du422 sosip.664 trimer in complex with neutralizing antibody fab fragments 10-1074 and bg24
no
viral protein/immune system
2022-03-16
2022-08-17
electron microscopy
3.5
N.A.
N.A.
35960796
10.1126/sciadv.abp8155
0
auth_asym_id
VH:VL
IGHV4
IGLV3
Q
R
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH
SYVRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLGQPKAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVT
VRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTV
15.82231
13.481587
243
216
128
105
128
105
50
10-1074 fab heavy chain
10-1074 light chain
homo sapiens
homo sapiens
P
protein
envelope glycoprotein gp160
human immunodeficiency virus 1
25
10
0.91
HL
train
7xa3_E
7xa3
cryo-em structure of the ccl2 bound ccr2-gi complex
no
membrane protein
2022-03-17
2022-08-24
electron microscopy
2.9
N.A.
N.A.
35570218
10.1038/s41421-022-00403-4
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKGSLEVLFQ
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.518753
0
256
0
230
0
246
0
0
scfv16
N.A.
homo sapiens
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
32;23
18;10
0.9;0.77
H_only
train
7ucx_H_L
7ucx
lrp8 11h1 fab complexed to a cyclized cr1 peptide
no
transport protein
2022-03-17
2023-01-18
x-ray diffraction
1.72
0.24
0.205
N.A.
10.3389/fddsv.2022.1093153
0
auth_asym_id
FabH:FabL
IGHV3
IGKV2
H
L
EVQLVESGGDLVKPGGSLKLSCAASRFTFSNYGMSWVRQTPDKRLEWVATISSGGRYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCARDYLYAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
DVVMTQTPLSLPVSLGDQASISCRSSQSLVYSNGNTYLHWYLQKPGQSPKVLMYKVSNRFSGVSDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPLTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGDLVKPGGSLKLSCAASRFTFSNYGMSWVRQTPDKRLEWVATISSGGRYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCARDYLYAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV
DVVMTQTPLSLPVSLGDQASISCRSSQSLVYSNGNTYLHWYLQKPGQSPKVLMYKVSNRFSGVSDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHVPLTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
19.995821
23.538593
224
219
206
218
215
218
90
11h1 fab heavy chain
11h1 fab light chain
homo sapiens
homo sapiens
B
peptide
cyclized cr1 peptide
homo sapiens
41
19
0.66
HL
train
7ucq_H
7ucq
pfs230 d1 domain in complex with 230as-18
yes
cell invasion
2022-03-17
2023-02-15
x-ray diffraction
2.5
0.248
0.204
36792576
10.1016/j.immuni.2023.01.012
0
auth_asym_id
scFv
N.A.
N.A.
H
N.A.
TGQVQLVESGGGVVQPGGSLRLSCAASGFTFSSFAMHWARQAPGKGLEWVAYIRYDGTKEFYTDSAKGRFTISRDNSKNTLYLQMDSLRAEDTALYYCAKDLGINSYGYGGLDFWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSEIVLTQSPATLSLSPGERGTLSCRASQNVNRYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRAIWPPLTFGGGTKVEIKGTHHHHHH
N.A.
TGQVQLVESGGGVVQPGGSLRLSCAASGFTFSSFAMHWARQAPGKGLEWVAYIRYDGTKEFYTDSAKGRFTISRDNSKNTLYLQMDSLRAEDTALYYCAKDLGINSYGYGGLDFWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSEIVLTQSPATLSLSPGERGTLSCRASQNVNRYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRAIWPPLTFGGGTKVEIK
N.A.
17.270926
0
261
0
233
0
253
0
0
230as-18
N.A.
homo sapiens
N.A.
A
protein
gametocyte surface protein p230
plasmodium falciparum
42
17
0.81
H_only
train
7ucq_I
7ucq
pfs230 d1 domain in complex with 230as-18
yes
cell invasion
2022-03-17
2023-02-15
x-ray diffraction
2.5
0.248
0.204
36792576
10.1016/j.immuni.2023.01.012
0
auth_asym_id
scFv
N.A.
N.A.
I
N.A.
TGQVQLVESGGGVVQPGGSLRLSCAASGFTFSSFAMHWARQAPGKGLEWVAYIRYDGTKEFYTDSAKGRFTISRDNSKNTLYLQMDSLRAEDTALYYCAKDLGINSYGYGGLDFWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSEIVLTQSPATLSLSPGERGTLSCRASQNVNRYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRAIWPPLTFGGGTKVEIKGTHHHHHH
N.A.
TGQVQLVESGGGVVQPGGSLRLSCAASGFTFSSFAMHWARQAPGKGLEWVAYIRYDGTKEFYTDSAKGRFTISRDNSKNTLYLQMDSLRAEDTALYYCAKDLGINSYGYGGLDFWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSEIVLTQSPATLSLSPGERGTLSCRASQNVNRYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRAIWPPLTFGGGTKVEIK
N.A.
17.328794
0
261
0
233
0
253
0
0
230as-18
N.A.
homo sapiens
N.A.
B
protein
gametocyte surface protein p230
plasmodium falciparum
39
16
0.8
H_only
train
7ucq_J
7ucq
pfs230 d1 domain in complex with 230as-18
yes
cell invasion
2022-03-17
2023-02-15
x-ray diffraction
2.5
0.248
0.204
36792576
10.1016/j.immuni.2023.01.012
0
auth_asym_id
scFv
N.A.
N.A.
J
N.A.
TGQVQLVESGGGVVQPGGSLRLSCAASGFTFSSFAMHWARQAPGKGLEWVAYIRYDGTKEFYTDSAKGRFTISRDNSKNTLYLQMDSLRAEDTALYYCAKDLGINSYGYGGLDFWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSEIVLTQSPATLSLSPGERGTLSCRASQNVNRYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRAIWPPLTFGGGTKVEIKGTHHHHHH
N.A.
TGQVQLVESGGGVVQPGGSLRLSCAASGFTFSSFAMHWARQAPGKGLEWVAYIRYDGTKEFYTDSAKGRFTISRDNSKNTLYLQMDSLRAEDTALYYCAKDLGINSYGYGGLDFWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSEIVLTQSPATLSLSPGERGTLSCRASQNVNRYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRAIWPPLTFGGGTKVEIK
N.A.
17.306505
0
261
0
233
0
253
0
0
230as-18
N.A.
homo sapiens
N.A.
C
protein
gametocyte surface protein p230
plasmodium falciparum
40
16
0.8
H_only
train
7ucq_K
7ucq
pfs230 d1 domain in complex with 230as-18
yes
cell invasion
2022-03-17
2023-02-15
x-ray diffraction
2.5
0.248
0.204
36792576
10.1016/j.immuni.2023.01.012
0
auth_asym_id
scFv
N.A.
N.A.
K
N.A.
TGQVQLVESGGGVVQPGGSLRLSCAASGFTFSSFAMHWARQAPGKGLEWVAYIRYDGTKEFYTDSAKGRFTISRDNSKNTLYLQMDSLRAEDTALYYCAKDLGINSYGYGGLDFWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSEIVLTQSPATLSLSPGERGTLSCRASQNVNRYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRAIWPPLTFGGGTKVEIKGTHHHHHH
N.A.
TGQVQLVESGGGVVQPGGSLRLSCAASGFTFSSFAMHWARQAPGKGLEWVAYIRYDGTKEFYTDSAKGRFTISRDNSKNTLYLQMDSLRAEDTALYYCAKDLGINSYGYGGLDFWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSEIVLTQSPATLSLSPGERGTLSCRASQNVNRYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRAIWPPLTFGGGTKVEIK
N.A.
17.308964
0
261
0
233
0
253
0
0
230as-18
N.A.
homo sapiens
N.A.
D
protein
gametocyte surface protein p230
plasmodium falciparum
41
17
0.81
H_only
train
7udg_H_L
7udg
integrin alpha iib beta3 complex with lotrafiban
no
cell adhesion/inhibitor
2022-03-19
2022-08-17
x-ray diffraction
2.8
0.235
0.213
36113427
10.1016/j.cell.2022.08.008
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
H
L
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGP
DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
22.982647
22.958883
221
214
216
214
219
214
102
10e5 fab heavy chain
10e5 fab light chain
mus musculus
mus musculus
A
protein
integrin alpha-iib heavy chain
homo sapiens
49
21
0.81
HL
train
7udg_E_F
7udg
integrin alpha iib beta3 complex with lotrafiban
no
cell adhesion/inhibitor
2022-03-19
2022-08-17
x-ray diffraction
2.8
0.235
0.213
36113427
10.1016/j.cell.2022.08.008
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
E
F
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGP
DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
23.022379
22.988356
221
214
214
214
219
214
105
10e5 fab heavy chain
10e5 fab light chain
mus musculus
mus musculus
C
protein
integrin alpha-iib heavy chain
homo sapiens
40
18
0.86
HL
train
7udh_H_L
7udh
integrin alpha iib beta3 complex with bms4-3
no
cell adhesion/inhibitor
2022-03-19
2022-08-17
x-ray diffraction
2
0.214
0.185
36113427
10.1016/j.cell.2022.08.008
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
H
L
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGP
DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
23.03313
22.988829
221
214
216
214
219
214
102
10e5 fab heavy chain
10e5 fab light chain
mus musculus
mus musculus
A
protein
integrin alpha-iib heavy chain
homo sapiens
48
20
0.8
HL
train
7udh_E_F
7udh
integrin alpha iib beta3 complex with bms4-3
no
cell adhesion/inhibitor
2022-03-19
2022-08-17
x-ray diffraction
2
0.214
0.185
36113427
10.1016/j.cell.2022.08.008
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
E
F
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGP
DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
23.028908
22.993212
221
214
214
214
219
214
102
10e5 fab heavy chain
10e5 fab light chain
mus musculus
mus musculus
C
protein
integrin alpha-iib heavy chain
homo sapiens
42
19
0.86
HL
train
7xau_E
7xau
structure of somatostatin receptor 2 bound with octreotide.
no
membrane protein
2022-03-19
2022-08-31
electron microscopy
2.97
N.A.
N.A.
35595746
10.1038/s41421-022-00405-2
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFDVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELVDENLYFQGASHHHHHHHH
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.288475
0
304
0
233
0
248
0
0
scfv16
N.A.
rattus
N.A.
B;C
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;bos taurus
34;24
22;11
0.92;0.85
H_only
train
7xav_E
7xav
structure of somatostatin receptor 2 bound with lanreotide.
no
membrane protein
2022-03-19
2022-08-31
electron microscopy
2.87
N.A.
N.A.
35595746
10.1038/s41421-022-00405-2
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFDVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELVDENLYFQGASHHHHHHHH
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.207638
0
304
0
233
0
248
0
0
scfv16
N.A.
rattus
N.A.
B;C
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;bos taurus
34;23
22;10
0.92;0.77
H_only
train
7uds_F_G
7uds
structure of lineage i (pinneo) lassa virus glycoprotein bound to fab 25.10c
yes
viral protein/immune system
2022-03-20
2022-06-15
electron microscopy
3.1
N.A.
N.A.
35730904
10.1128/mbio.01278-22
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
F
G
QVQLQESGGGLVKPGGSLRLSCTASGFNFNKYNMNWVRQAPGKGLEWVSSISALSTYIYYADSLKGRFTVSRDNAKNSLFLQMNSLRDDDTAVYYCAREIRRASTWSADLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
IQMTQSPSSLSASVGDRVIITCRASQSISSSLNWYQQKPGKAPKLLIYAAVNLETGVPSRFSGSGFGTDFTLAISNVQPEDFATYYCQQSDTRTFGRGTKLDVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
QLQESGGGLVKPGGSLRLSCTASGFNFNKYNMNWVRQAPGKGLEWVSSISALSTYIYYADSLKGRFTVSRDNAKNSLFLQMNSLRDDDTAVYYCAREIRRASTWSADLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
IQMTQSPSSLSASVGDRVIITCRASQSISSSLNWYQQKPGKAPKLLIYAAVNLETGVPSRFSGSGFGTDFTLAISNVQPEDFATYYCQQSDTRTFGRGTKLDVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
23.241148
22.748066
226
209
213
209
220
209
86
25.10c fab heavy chain
25.10c fab light chain
homo sapiens
homo sapiens
A;a
protein;protein
glycoprotein g1;glycoprotein g2
lassa mammarenavirus;lassa mammarenavirus
21;11
9;6
1.0;0.86
HL
train
7uds_D_E
7uds
structure of lineage i (pinneo) lassa virus glycoprotein bound to fab 25.10c
yes
viral protein/immune system
2022-03-20
2022-06-15
electron microscopy
3.1
N.A.
N.A.
35730904
10.1128/mbio.01278-22
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
D
E
QVQLQESGGGLVKPGGSLRLSCTASGFNFNKYNMNWVRQAPGKGLEWVSSISALSTYIYYADSLKGRFTVSRDNAKNSLFLQMNSLRDDDTAVYYCAREIRRASTWSADLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
IQMTQSPSSLSASVGDRVIITCRASQSISSSLNWYQQKPGKAPKLLIYAAVNLETGVPSRFSGSGFGTDFTLAISNVQPEDFATYYCQQSDTRTFGRGTKLDVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
QLQESGGGLVKPGGSLRLSCTASGFNFNKYNMNWVRQAPGKGLEWVSSISALSTYIYYADSLKGRFTVSRDNAKNSLFLQMNSLRDDDTAVYYCAREIRRASTWSADLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
IQMTQSPSSLSASVGDRVIITCRASQSISSSLNWYQQKPGKAPKLLIYAAVNLETGVPSRFSGSGFGTDFTLAISNVQPEDFATYYCQQSDTRTFGRGTKLDVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
23.23554
22.752087
226
209
213
209
220
209
87
25.10c fab heavy chain
25.10c fab light chain
homo sapiens
homo sapiens
B;b
protein;protein
glycoprotein g1;glycoprotein g2
lassa mammarenavirus;lassa mammarenavirus
22;11
10;6
1.0;0.86
HL
train
7uds_H_L
7uds
structure of lineage i (pinneo) lassa virus glycoprotein bound to fab 25.10c
yes
viral protein/immune system
2022-03-20
2022-06-15
electron microscopy
3.1
N.A.
N.A.
35730904
10.1128/mbio.01278-22
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
QVQLQESGGGLVKPGGSLRLSCTASGFNFNKYNMNWVRQAPGKGLEWVSSISALSTYIYYADSLKGRFTVSRDNAKNSLFLQMNSLRDDDTAVYYCAREIRRASTWSADLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
IQMTQSPSSLSASVGDRVIITCRASQSISSSLNWYQQKPGKAPKLLIYAAVNLETGVPSRFSGSGFGTDFTLAISNVQPEDFATYYCQQSDTRTFGRGTKLDVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
QLQESGGGLVKPGGSLRLSCTASGFNFNKYNMNWVRQAPGKGLEWVSSISALSTYIYYADSLKGRFTVSRDNAKNSLFLQMNSLRDDDTAVYYCAREIRRASTWSADLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
IQMTQSPSSLSASVGDRVIITCRASQSISSSLNWYQQKPGKAPKLLIYAAVNLETGVPSRFSGSGFGTDFTLAISNVQPEDFATYYCQQSDTRTFGRGTKLDVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
23.236372
22.736954
226
209
213
209
220
209
84
25.10c fab heavy chain
25.10c fab light chain
homo sapiens
homo sapiens
C;c
protein;protein
glycoprotein g1;glycoprotein g2
lassa mammarenavirus;lassa mammarenavirus
20;13
9;6
1.0;0.75
HL
train
7xbd_E
7xbd
cryo-em structure of human galanin receptor 2
no
membrane protein
2022-03-21
2022-07-13
electron microscopy
3.11
N.A.
N.A.
35913979
10.1371/journal.pbio.3001714
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAENLYFQ
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.760777
0
257
0
233
0
247
0
0
scfv16
N.A.
mus musculus
N.A.
B;C
protein;protein
guanine nucleotide-binding protein g(q) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
34;20
21;9
0.88;0.82
H_only
train
7z9q_E
7z9q
cryo-em structure of sars-cov-2 spike : h11-a10 nanobody complex
yes
antiviral protein
2022-03-21
2022-07-13
electron microscopy
3.6
N.A.
N.A.
35858383
10.1073/pnas.2205412119
0
auth_asym_id
VHH
IGHV3
N.A.
E
N.A.
QVQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCAGFSATRSLLSDYATWPYDYWGQGTQVTVSSKHHHHHH
N.A.
QVQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCAGFSATRSLLSDYATWPYDYWGQGTQVTVSSKHHHHHH
N.A.
15.166322
0
134
0
134
0
134
0
0
nanobody h11-a10
N.A.
lama glama
N.A.
A
protein
spike glycoprotein,fibritin
severe acute respiratory syndrome coronavirus 2
32
15
1
H_only
train
7z9q_F
7z9q
cryo-em structure of sars-cov-2 spike : h11-a10 nanobody complex
yes
antiviral protein
2022-03-21
2022-07-13
electron microscopy
3.6
N.A.
N.A.
35858383
10.1073/pnas.2205412119
0
auth_asym_id
VHH
IGHV3
N.A.
F
N.A.
QVQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCAGFSATRSLLSDYATWPYDYWGQGTQVTVSSKHHHHHH
N.A.
QVQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCAGFSATRSLLSDYATWPYDYWGQGTQVTVSSKHHHHHH
N.A.
15.166036
0
134
0
134
0
134
0
0
nanobody h11-a10
N.A.
lama glama
N.A.
B
protein
spike glycoprotein,fibritin
severe acute respiratory syndrome coronavirus 2
31
15
1
H_only
train
7z9q_D
7z9q
cryo-em structure of sars-cov-2 spike : h11-a10 nanobody complex
yes
antiviral protein
2022-03-21
2022-07-13
electron microscopy
3.6
N.A.
N.A.
35858383
10.1073/pnas.2205412119
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
QVQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCAGFSATRSLLSDYATWPYDYWGQGTQVTVSSKHHHHHH
N.A.
QVQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCAGFSATRSLLSDYATWPYDYWGQGTQVTVSSKHHHHHH
N.A.
15.165711
0
134
0
134
0
134
0
0
nanobody h11-a10
N.A.
lama glama
N.A.
C
protein
spike glycoprotein,fibritin
severe acute respiratory syndrome coronavirus 2
31
15
1
H_only
train
7z9r_X
7z9r
cryo-em structure of sars-cov-2 spike : h11-h4 q98r h100e nanobody complex in 2up1down conformation
yes
antiviral protein
2022-03-21
2022-07-13
electron microscopy
4.2
N.A.
N.A.
35858383
10.1073/pnas.2205412119
0
auth_asym_id
VHH
IGHV3
N.A.
X
N.A.
QVQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCARTEYVSYLLSDYATWPYDYWGQGTQVTVSS
N.A.
VQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCARTEYVSYLLSDYATWPYDYWGQGTQVTVSS
N.A.
13.965986
0
127
0
126
0
126
0
0
nanobody h11-h4 q98r h100e
N.A.
lama glama
N.A.
A
protein
spike glycoprotein,fibritin
severe acute respiratory syndrome coronavirus 2
32
15
1
H_only
train
7z9r_Y
7z9r
cryo-em structure of sars-cov-2 spike : h11-h4 q98r h100e nanobody complex in 2up1down conformation
yes
antiviral protein
2022-03-21
2022-07-13
electron microscopy
4.2
N.A.
N.A.
35858383
10.1073/pnas.2205412119
0
auth_asym_id
VHH
IGHV3
N.A.
Y
N.A.
QVQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCARTEYVSYLLSDYATWPYDYWGQGTQVTVSS
N.A.
VQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCARTEYVSYLLSDYATWPYDYWGQGTQVTVSS
N.A.
13.955395
0
127
0
126
0
126
0
0
nanobody h11-h4 q98r h100e
N.A.
lama glama
N.A.
B
protein
spike glycoprotein,fibritin
severe acute respiratory syndrome coronavirus 2
33
16
1
H_only
train
7z9r_Z
7z9r
cryo-em structure of sars-cov-2 spike : h11-h4 q98r h100e nanobody complex in 2up1down conformation
yes
antiviral protein
2022-03-21
2022-07-13
electron microscopy
4.2
N.A.
N.A.
35858383
10.1073/pnas.2205412119
0
auth_asym_id
VHH
IGHV3
N.A.
Z
N.A.
QVQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCARTEYVSYLLSDYATWPYDYWGQGTQVTVSS
N.A.
VQLVESGGGLMQAGGSLRLSCAVSGRTFSTAAMGWFRQAPGKEREFVAAIRWSGGSAYYADSVKGRFTISRDKAKNTVYLQMNSLKYEDTAVYYCARTEYVSYLLSDYATWPYDYWGQGTQVTVSS
N.A.
13.964953
0
127
0
126
0
126
0
0
nanobody h11-h4 q98r h100e
N.A.
lama glama
N.A.
C
protein
spike glycoprotein,fibritin
severe acute respiratory syndrome coronavirus 2
32
15
1
H_only
train
7ued_H_L
7ued
crystal structure of full length mesothelin bound with morab-009 fab
no
immune system
2022-03-21
2023-02-01
x-ray diffraction
3
0.237
0.201
36968141
10.1158/2767-9764.CRC-22-0306
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
H
L
QVQLQQSGPELEKPGASVKISCKASGYSFTGYTMNWVKQSHGKSLEWIGLITPYNGASSYNQKFRGKATLTVDKSSSTAYMDLLSLTSEDSAVYFCARGGYDGRGFDYWGSGTPVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIELTQSPAIMSASPGEKVTMTCSASSSVSYMHWYQQKSGTSPKRWIYDTSKLASGVPGRFSGSGSGNSYSLTISSVEAEDDATYYCQQWSKHPLTFGSGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
VQLQQSGPELEKPGASVKISCKASGYSFTGYTMNWVKQSHGKSLEWIGLITPYNGASSYNQKFRGKATLTVDKSSSTAYMDLLSLTSEDSAVYFCARGGYDGRGFDYWGSGTPVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIELTQSPAIMSASPGEKVTMTCSASSSVSYMHWYQQKSGTSPKRWIYDTSKLASGVPGRFSGSGSGNSYSLTISSVEAEDDATYYCQQWSKHPLTFGSGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
21.092852
23.27466
220
212
219
212
219
212
97
morab-009 fab heavy chain
morab-009 fab light chain
mus musculus
mus musculus
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7uem_D_C
7uem
genomic and structural basis for the human anti-alpha-galactosyl antibody response
no
immune system
2022-03-22
2022-06-29
x-ray diffraction
2.31
0.231
0.189
35867757
10.1073/pnas.2123212119
0
auth_asym_id
FabH:FabL
IGHV3
IGKV2
D
C
EVQLVESGGGLVQPGGSLRLSCAASGFIFRDSWMTWVRQAPGKGPEWVADINQGGSHKYYVDSVKGRFTISRDDAKNSLYLQMNSLRAEDTAVYYCARDPEFGALDYWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHH
DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGNTYLAWFQQRPGQSPRRLIYRVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCLQGTHGPHTFGQGTNLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFIFRDSWMTWVRQAPGKGPEWVADINQGGSHKYYVDSVKGRFTISRDDAKNSLYLQMNSLRAEDTAVYYCARDPEFGALDYWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGNTYLAWFQQRPGQSPRRLIYRVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCLQGTHGPHTFGQGTNLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
20.691904
23.619915
229
219
218
216
218
216
98
heavy chain fab arm of antibody hkb7
light chain fab of antibody hkb7
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7uem_H_L
7uem
genomic and structural basis for the human anti-alpha-galactosyl antibody response
no
immune system
2022-03-22
2022-06-29
x-ray diffraction
2.31
0.231
0.189
35867757
10.1073/pnas.2123212119
0
auth_asym_id
FabH:FabL
IGHV3
IGKV2
H
L
EVQLVESGGGLVQPGGSLRLSCAASGFIFRDSWMTWVRQAPGKGPEWVADINQGGSHKYYVDSVKGRFTISRDDAKNSLYLQMNSLRAEDTAVYYCARDPEFGALDYWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHH
DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGNTYLAWFQQRPGQSPRRLIYRVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCLQGTHGPHTFGQGTNLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFIFRDSWMTWVRQAPGKGPEWVADINQGGSHKYYVDSVKGRFTISRDDAKNSLYLQMNSLRAEDTAVYYCARDPEFGALDYWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DVVMTQSPLSLPVTLGQPASISCRSSQSLVYSDGNTYLAWFQQRPGQSPRRLIYRVSNRDSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCLQGTHGPHTFGQGTNLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
21.089533
23.636436
229
219
219
216
219
216
95
heavy chain fab arm of antibody hkb7
light chain fab of antibody hkb7
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7uen_H_L
7uen
genetic and structural basis of the human anti-alpha-galactosyl antibody response
no
immune system
2022-03-22
2022-06-29
x-ray diffraction
1.55
0.175
0.128
35867757
10.1073/pnas.2123212119
0
auth_asym_id
FabH:FabL
IGHV3
IGKV2
H
L
EVKLEESGGGLVQPGRSMKLSCVASGFIFSDYWMNWVRQSPEKGLEWIAQIRTNPYNYETYYSDSVKGRFTISRDDSKSSVYLQMKNLRSEDMGIYYCTWSHYALDNWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHH
DVVMTQTPLSLPVSLGDQASISCRSSQSLVHSDGNTYFHWYLQKPGQSPKLLIHRISNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHIPWTFGGGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVKLEESGGGLVQPGRSMKLSCVASGFIFSDYWMNWVRQSPEKGLEWIAQIRTNPYNYETYYSDSVKGRFTISRDDSKSSVYLQMKNLRSEDMGIYYCTWSHYALDNWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVE
DVVMTQTPLSLPVSLGDQASISCRSSQSLVHSDGNTYFHWYLQKPGQSPKLLIHRISNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTHIPWTFGGGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.116924
23.12516
229
219
205
218
217
218
91
m86 antibody fab heavy chain
m86 antibody fab light chain
mus musculus
mus musculus
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7ufh_H_L
7ufh
integrin alpha iib beta3 complex with fradafiban (mn/ca)
no
cell adhesion/inhibitor
2022-03-22
2022-08-17
x-ray diffraction
3
0.245
0.225
36113427
10.1016/j.cell.2022.08.008
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
H
L
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGP
DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
23.063807
23.035131
221
214
216
214
219
214
99
10e5 fab heavy chain
10e5 fab light chain
mus musculus
mus musculus
A
protein
integrin alpha-iib heavy chain
homo sapiens
43
18
0.82
HL
train
7ufh_E_F
7ufh
integrin alpha iib beta3 complex with fradafiban (mn/ca)
no
cell adhesion/inhibitor
2022-03-22
2022-08-17
x-ray diffraction
3
0.245
0.225
36113427
10.1016/j.cell.2022.08.008
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
E
F
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGP
DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
23.04039
23.047258
221
214
214
214
219
214
103
10e5 fab heavy chain
10e5 fab light chain
mus musculus
mus musculus
C
protein
integrin alpha-iib heavy chain
homo sapiens
43
19
0.83
HL
train
7ufn_A_D
7ufn
structure of pfcsp peptide 21 with antibody p3-21
no
immune system
2022-03-22
2023-04-12
x-ray diffraction
2.2
0.204
0.164
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV1
IGKV4
A
D
QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYAIHWVRQAPGQRLEWMGWIKAGNGNTRYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAVYYCALLTVIRQDDTFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
DIVMTQSPDSLAVSLGERATINCKSSQNILYSSNNKNYLAWYQQKPGQAPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCHQYYSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYAIHWVRQAPGQRLEWMGWIKAGNGNTRYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAVYYCALLTVIRQDDTFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIVMTQSPDSLAVSLGERATINCKSSQNILYSSNNKNYLAWYQQKPGQAPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCHQYYSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
21.087555
23.87868
226
220
221
217
221
217
90
p3-21 fab heavy chain
p3-21 fab light chain
homo sapiens
homo sapiens
E
peptide
pfcsp peptide 21
plasmodium falciparum
36
17
0.71
HL
train
7ufn_B_C
7ufn
structure of pfcsp peptide 21 with antibody p3-21
no
immune system
2022-03-22
2023-04-12
x-ray diffraction
2.2
0.204
0.164
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV1
IGKV4
B
C
QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYAIHWVRQAPGQRLEWMGWIKAGNGNTRYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAVYYCALLTVIRQDDTFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
DIVMTQSPDSLAVSLGERATINCKSSQNILYSSNNKNYLAWYQQKPGQAPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCHQYYSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAEVKKPGASVKVSCKASGYTFTSYAIHWVRQAPGQRLEWMGWIKAGNGNTRYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAVYYCALLTVIRQDDTFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIVMTQSPDSLAVSLGERATINCKSSQNILYSSNNKNYLAWYQQKPGQAPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCHQYYSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
21.061739
23.927223
226
220
221
217
221
217
87
p3-21 fab heavy chain
p3-21 fab light chain
homo sapiens
homo sapiens
F
peptide
pfcsp peptide 21
plasmodium falciparum
38
18
0.72
HL
train
7zau_B
7zau
fascin-1 in complex with nb 3e11
no
structural protein
2022-03-22
2023-09-27
x-ray diffraction
2.2
0.29
0.247
38503329
10.1098/rsob.230376
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
MAQVQLQESGGGLVQAGGSLRLSCAASGRIFSSTRMGWFRQAPGKDREFIASIVWGTTTTYYVDSVKGRFTISRDNAKNMVFLQMNSLKPEDTAVYYCAAKIYYSGTYLAFNPDYWGQGTQVTVSSHHHHHH
N.A.
AQVQLQESGGGLVQAGGSLRLSCAASGRIFSSTRMGWFRQAPGKDREFIASIVWGTTTTYYVDSVKGRFTISRDNAKNMVFLQMNSLKPEDTAVYYCAAKIYYSGTYLAFNPDYWGQGTQVTVSSH
N.A.
13.896862
0
132
0
126
0
126
0
0
nanobody 3e11
N.A.
lama glama
N.A.
A
protein
fascin
homo sapiens
51
18
0.78
H_only
train
7zau_D
7zau
fascin-1 in complex with nb 3e11
no
structural protein
2022-03-22
2023-09-27
x-ray diffraction
2.2
0.29
0.247
38503329
10.1098/rsob.230376
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
MAQVQLQESGGGLVQAGGSLRLSCAASGRIFSSTRMGWFRQAPGKDREFIASIVWGTTTTYYVDSVKGRFTISRDNAKNMVFLQMNSLKPEDTAVYYCAAKIYYSGTYLAFNPDYWGQGTQVTVSSHHHHHH
N.A.
QVQLQESGGGLVQAGGSLRLSCAASGRIFSSTRMGWFRQAPGKDREFIASIVWGTTTTYYVDSVKGRFTISRDNAKNMVFLQMNSLKPEDTAVYYCAAKIYYSGTYLAFNPDYWGQGTQVTVSS
N.A.
13.738306
0
132
0
124
0
124
0
0
nanobody 3e11
N.A.
lama glama
N.A.
C
protein
fascin
homo sapiens
48
16
0.76
H_only
train
7zau_F
7zau
fascin-1 in complex with nb 3e11
no
structural protein
2022-03-22
2023-09-27
x-ray diffraction
2.2
0.29
0.247
38503329
10.1098/rsob.230376
0
auth_asym_id
VHH
IGHV3
N.A.
F
N.A.
MAQVQLQESGGGLVQAGGSLRLSCAASGRIFSSTRMGWFRQAPGKDREFIASIVWGTTTTYYVDSVKGRFTISRDNAKNMVFLQMNSLKPEDTAVYYCAAKIYYSGTYLAFNPDYWGQGTQVTVSSHHHHHH
N.A.
QVQLQESGGGLVQAGGSLRLSCAASGRIFSSTRMGWFRQAPGKDREFIASIVWGTTTTYYVDSVKGRFTISRDNAKNMVFLQMNSLKPEDTAVYYCAAKIYYSGTYLAFNPDYWGQGTQVTVSS
N.A.
13.720649
0
132
0
124
0
124
0
0
nanobody 3e11
N.A.
lama glama
N.A.
E
protein
fascin
homo sapiens
49
16
0.76
H_only
train
7zau_H
7zau
fascin-1 in complex with nb 3e11
no
structural protein
2022-03-22
2023-09-27
x-ray diffraction
2.2
0.29
0.247
38503329
10.1098/rsob.230376
0
auth_asym_id
VHH
IGHV3
N.A.
H
N.A.
MAQVQLQESGGGLVQAGGSLRLSCAASGRIFSSTRMGWFRQAPGKDREFIASIVWGTTTTYYVDSVKGRFTISRDNAKNMVFLQMNSLKPEDTAVYYCAAKIYYSGTYLAFNPDYWGQGTQVTVSSHHHHHH
N.A.
QVQLQESGGGLVQAGGSLRLSCAASGRIFSSTRMGWFRQAPGKDREFIASIVWGTTTTYYVDSVKGRFTISRDNAKNMVFLQMNSLKPEDTAVYYCAAKIYYSGTYLAFNPDYWGQGTQVTVSSH
N.A.
13.861947
0
132
0
125
0
125
0
0
nanobody 3e11
N.A.
lama glama
N.A.
G
protein
fascin
homo sapiens
50
16
0.76
H_only
train
7ufw_H
7ufw
pfs230 d1d2 in complex with lmiv230-01
no
cell invasion
2022-03-23
2023-02-15
x-ray diffraction
2.1
0.213
0.19
36792576
10.1016/j.immuni.2023.01.012
0
auth_asym_id
scFv
N.A.
N.A.
H
N.A.
TGQVQLVQSGAEVKKPGSSVKVSCKVSGGTFNTYAIIWVRQAPGQGLEWMGAIIPFQDRGQYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCAKESGRAVADRWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSGGGGSDIVMTQSPASLALSLGERATLYCRASHSISSWLAWYQQKPGKAPKLLIYKASTLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYKSYPWTFGQGTKLEIKRGTHHHHHH
N.A.
QVQLVQSGAEVKKPGSSVKVSCKVSGGTFNTYAIIWVRQAPGQGLEWMGAIIPFQDRGQYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCAKESGRAVADRWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSGGGGSDIVMTQSPASLALSLGERATLYCRASHSISSWLAWYQQKPGKAPKLLIYKASTLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYKSYPWTFGQGTKLEIKR
N.A.
17.56038
0
261
0
229
0
251
0
0
lmiv230-01
N.A.
homo sapiens
N.A.
A
protein
gametocyte surface protein p230
plasmodium falciparum
55
25
0.81
H_only
train
7ufw_I
7ufw
pfs230 d1d2 in complex with lmiv230-01
no
cell invasion
2022-03-23
2023-02-15
x-ray diffraction
2.1
0.213
0.19
36792576
10.1016/j.immuni.2023.01.012
0
auth_asym_id
scFv
N.A.
N.A.
I
N.A.
TGQVQLVQSGAEVKKPGSSVKVSCKVSGGTFNTYAIIWVRQAPGQGLEWMGAIIPFQDRGQYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCAKESGRAVADRWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSGGGGSDIVMTQSPASLALSLGERATLYCRASHSISSWLAWYQQKPGKAPKLLIYKASTLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYKSYPWTFGQGTKLEIKRGTHHHHHH
N.A.
QVQLVQSGAEVKKPGSSVKVSCKVSGGTFNTYAIIWVRQAPGQGLEWMGAIIPFQDRGQYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCAKESGRAVADRWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSGGGGSDIVMTQSPASLALSLGERATLYCRASHSISSWLAWYQQKPGKAPKLLIYKASTLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYKSYPWTFGQGTKLEIKR
N.A.
17.57264
0
261
0
228
0
251
0
0
lmiv230-01
N.A.
homo sapiens
N.A.
B
protein
gametocyte surface protein p230
plasmodium falciparum
55
25
0.81
H_only
train
7ufo_H_L
7ufo
structure of pfcsp peptide 21 with antibody p3-42
no
immune system
2022-03-23
2023-04-12
x-ray diffraction
1.8
0.222
0.192
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV1
IGKV4
H
L
QVHLVQSGAEVKKPGASVKVSCKASGYTFTSYAIHWVRQAPGQRLEWMGWIKGGNGNTRYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAVYYCALLTVITPDDRFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
DIVMTQSPDSLAVSLGERATINCKSSQNILYSSNNKNYLAWYQQKPGQPPKLLFYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCHQYYSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VHLVQSGAEVKKPGASVKVSCKASGYTFTSYAIHWVRQAPGQRLEWMGWIKGGNGNTRYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAVYYCALLTVITPDDRFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIVMTQSPDSLAVSLGERATINCKSSQNILYSSNNKNYLAWYQQKPGQPPKLLFYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCHQYYSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
20.805468
23.97115
226
220
220
217
220
217
96
p3-42 fab heavy chain
p3-42 fab light chain
homo sapiens
homo sapiens
A
peptide
pfcsp peptide 21
plasmodium falciparum
34
17
0.74
HL
train
7ufq_H_L
7ufq
structure of pfcsp peptide 21 with antibody p3-43
no
immune system
2022-03-23
2023-04-12
x-ray diffraction
2.3
0.285
0.215
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV1
IGKV4
H
L
QVHLVQSGAEVKKPGASVKVSCKASGYTFTSYAIHWVRQAPGQRLEWMGWIKGGNGNTRYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAVYYCALLTVITKDDAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
DIVMTQSPDSLAVSLGERATINCKSSQNILYSSNNKNYLAWYQQKPGQPPKLLFYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCHQYYSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVHLVQSGAEVKKPGASVKVSCKASGYTFTSYAIHWVRQAPGQRLEWMGWIKGGNGNTRYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAVYYCALLTVITKDDAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIVMTQSPDSLAVSLGERATINCKSSQNILYSSNNKNYLAWYQQKPGQPPKLLFYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCHQYYSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
20.625
24.018013
226
220
221
219
221
219
95
p3-43 fab heavy chain
p3-43 fab light chain
homo sapiens
homo sapiens
A
peptide
pfcsp peptide 21
plasmodium falciparum 3d7
36
17
0.71
HL
train
7ufq_B_D
7ufq
structure of pfcsp peptide 21 with antibody p3-43
no
immune system
2022-03-23
2023-04-12
x-ray diffraction
2.3
0.285
0.215
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV1
IGKV4
B
D
QVHLVQSGAEVKKPGASVKVSCKASGYTFTSYAIHWVRQAPGQRLEWMGWIKGGNGNTRYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAVYYCALLTVITKDDAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK
DIVMTQSPDSLAVSLGERATINCKSSQNILYSSNNKNYLAWYQQKPGQPPKLLFYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCHQYYSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVHLVQSGAEVKKPGASVKVSCKASGYTFTSYAIHWVRQAPGQRLEWMGWIKGGNGNTRYSQKFQDRVTITRDTSASTAYMELSSLRSEDTAVYYCALLTVITKDDAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIVMTQSPDSLAVSLGERATINCKSSQNILYSSNNKNYLAWYQQKPGQPPKLLFYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCHQYYSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
20.658957
24.030392
226
220
221
219
221
219
98
p3-43 fab heavy chain
p3-43 fab light chain
homo sapiens
homo sapiens
C
peptide
pfcsp peptide 21
plasmodium falciparum 3d7
36
17
0.71
HL
train
7zbu_H_L
7zbu
cryoem structure of sars-cov-2 spike monomer in complex with neutralising antibody p008_60
yes
viral protein
2022-03-24
2022-08-17
electron microscopy
4.31
N.A.
N.A.
35981534
10.1016/j.celrep.2022.111276
0
auth_asym_id
FabH:FabL
IGHV3
IGKV3
H
L
EVQLVESGGGVVQPGRSLRLTCAASGFIFSSYGMHWVRQAPGKGLEWVAVISYDGSYKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCTKADYYDFWSGYQKTYYYYMDVWGKGTTVTISSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVGRTKHHHHHH
DIQLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGTSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPQITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLVESGGGVVQPGRSLRLTCAASGFIFSSYGMHWVRQAPGKGLEWVAVISYDGSYKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCTKADYYDFWSGYQKTYYYYMDVWGKGTTVTISSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVGRT
IQLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGTSSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPQITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTK
23.807486
21.732155
237
216
222
192
229
208
94
p008_60 antibody, heavy chain
p008_60 antibody, light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
45
24
0.92
HL
train
7xck_A_B
7xck
cryo-em structure of sars-cov-2 omicron rbd in complex with s309 fab (local refinement)
yes
viral protein
2022-03-24
2022-08-31
electron microscopy
2.5
N.A.
N.A.
N.A.
10.1038/s41467-022-32665-7
0
auth_asym_id
FabH:FabL
IGHV1
IGKV3
A
B
QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
23.176165
23.104082
230
214
223
212
228
212
87
s309 heavy chain
s309 light chain
homo sapiens
homo sapiens
M
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
37
17
0.89
HL
train
7xcp_H_L
7xcp
cryo-em structure of omicron rbd complexed with ace2 and 304 fab
yes
viral protein
2022-03-24
2022-08-31
electron microscopy
3.05
N.A.
N.A.
N.A.
10.1038/s41467-022-32665-7
0
auth_asym_id
VH:VL
IGHV3
IGKV1
H
L
EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYDMHWVRQTTGKGLEWVSTIGTAGDTYYPDSVKGRFTISREDAKNSLYLQMNSLRAGDTAVYYCARGDSSGYYYYFDYWGQGTLLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
DIQMTQSPSSLSAAVGDRVTITCRASQSIGSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFAIYYCQQSYVSPTYTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLVESGGGLVQPGGSLRLSCAASGFTFSSYDMHWVRQTTGKGLEWVSTIGTAGDTYYPDSVKGRFTISREDAKNSLYLQMNSLRAGDTAVYYCARGDSSGYYYYFDYWGQGTLLTVS
DIQMTQSPSSLSAAVGDRVTITCRASQSIGSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFAIYYCQQSYVSPTYTFGPGTKVDIK
13.857545
13.125682
223
215
118
108
118
108
45
heavy chain of 304 fab
lignt chain of 304 fab
homo sapiens
homo sapiens
B
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
51
23
0.88
HL
train
7xco_H_L
7xco
cryo-em structure of sars-cov-2 omicron spike protein (s-6p-rrar) in complex with s309 fab
yes
viral protein
2022-03-24
2022-09-21
electron microscopy
2.5
N.A.
N.A.
N.A.
10.1038/s41467-022-32665-7
0
auth_asym_id
FabH:FabL
IGHV1
IGKV3
H
L
QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
23.203478
23.033352
230
214
223
212
228
212
90
s309 fab heavy chain
s309 fab light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
40
18
0.86
HL
train
7xco_M_N
7xco
cryo-em structure of sars-cov-2 omicron spike protein (s-6p-rrar) in complex with s309 fab
yes
viral protein
2022-03-24
2022-09-21
electron microscopy
2.5
N.A.
N.A.
N.A.
10.1038/s41467-022-32665-7
0
auth_asym_id
FabH:FabL
IGHV1
IGKV3
M
N
QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
23.226456
23.113749
230
214
223
212
228
212
86
s309 fab heavy chain
s309 fab light chain
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
37
16
0.84
HL
train
7xco_O_P
7xco
cryo-em structure of sars-cov-2 omicron spike protein (s-6p-rrar) in complex with s309 fab
yes
viral protein
2022-03-24
2022-09-21
electron microscopy
2.5
N.A.
N.A.
N.A.
10.1038/s41467-022-32665-7
0
auth_asym_id
FabH:FabL
IGHV1
IGKV3
O
P
QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
23.235428
23.062521
230
214
223
212
228
212
86
s309 fab heavy chain
s309 fab light chain
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
40
17
0.85
HL
train
7uh8_H_L
7uh8
integrin alpha iib beta3 complex with roxifiban (mn/ca)
no
cell adhesion/inhibitor
2022-03-25
2022-08-17
x-ray diffraction
2.75
0.248
0.229
36113427
10.1016/j.cell.2022.08.008
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
H
L
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGP
DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
23.047548
23.03295
221
214
216
214
219
214
103
10e5 fab heavy chain
10e5 fab light chain
mus musculus
mus musculus
A
protein
integrin alpha-iib heavy chain
homo sapiens
45
20
0.87
HL
train
7uh8_E_F
7uh8
integrin alpha iib beta3 complex with roxifiban (mn/ca)
no
cell adhesion/inhibitor
2022-03-25
2022-08-17
x-ray diffraction
2.75
0.248
0.229
36113427
10.1016/j.cell.2022.08.008
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
E
F
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGP
DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYVHWVKQRPEQGLEWIGRIDPANGYTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCVRPLYDYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
DILMTQSPSSMSVSLGDTVSITCHASQGISSNIGWLQQKPGKSFMGLIYYGTNLVDGVPSRFSGSGSGADYSLTISSLDSEDFADYYCVQYAQLPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
23.031181
23.020859
221
214
214
214
219
214
106
10e5 fab heavy chain
10e5 fab light chain
mus musculus
mus musculus
C
protein
integrin alpha-iib heavy chain
homo sapiens
42
19
0.86
HL
train
7ugn_G_J
7ugn
cryo-em structure of bg24 inferred germline fabs with germline cdr3s and 10-1074 fabs in complex with hiv-1 env immunogen bg505-sosipv4.1-gt1 - class 1
no
viral protein/immune system
2022-03-25
2022-10-26
electron microscopy
3.4
N.A.
N.A.
36253376
10.1038/s41467-022-33860-2
0
auth_asym_id
VH:VL
IGHV1
IGLV2
G
J
QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCATQLELDSSAGYAFDIWGQGTMVTVSSAS
QSALTQPRSVSGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCSSYEYFGGGTKLTVLS
QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCATQLELDSSAGYAFDIWGQGTMVTVSSAS
SALTQPRSVSGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCSSYEYFGGGTKLTVLS
14.479136
13.414477
125
106
125
105
125
105
33
bg24 inferred germline fab with germline cdr3s heavy chain
bg24 inferred germline fab with germline cdr3s light chain
homo sapiens
homo sapiens
A
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
50
14
0.58
HL
train
7ugn_M_P
7ugn
cryo-em structure of bg24 inferred germline fabs with germline cdr3s and 10-1074 fabs in complex with hiv-1 env immunogen bg505-sosipv4.1-gt1 - class 1
no
viral protein/immune system
2022-03-25
2022-10-26
electron microscopy
3.4
N.A.
N.A.
36253376
10.1038/s41467-022-33860-2
0
auth_asym_id
VH:VL
IGHV4
IGLV3
M
P
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSA
VRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLG
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSA
VRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLG
16.547964
13.822514
133
107
133
107
133
107
48
10-1074 fab heavy chain
10-1074 fab light chain
homo sapiens
homo sapiens
A
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
32
15
0.94
HL
train
7ugn_H_K
7ugn
cryo-em structure of bg24 inferred germline fabs with germline cdr3s and 10-1074 fabs in complex with hiv-1 env immunogen bg505-sosipv4.1-gt1 - class 1
no
viral protein/immune system
2022-03-25
2022-10-26
electron microscopy
3.4
N.A.
N.A.
36253376
10.1038/s41467-022-33860-2
0
auth_asym_id
VH:VL
IGHV1
IGLV2
H
K
QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCATQLELDSSAGYAFDIWGQGTMVTVSSAS
QSALTQPRSVSGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCSSYEYFGGGTKLTVLS
QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCATQLELDSSAGYAFDIWGQGTMVTVSSAS
SALTQPRSVSGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCSSYEYFGGGTKLTVLS
14.500889
13.415188
125
106
125
105
125
105
37
bg24 inferred germline fab with germline cdr3s heavy chain
bg24 inferred germline fab with germline cdr3s light chain
homo sapiens
homo sapiens
B
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
51
15
0.6
HL
train
7ugn_N_Q
7ugn
cryo-em structure of bg24 inferred germline fabs with germline cdr3s and 10-1074 fabs in complex with hiv-1 env immunogen bg505-sosipv4.1-gt1 - class 1
no
viral protein/immune system
2022-03-25
2022-10-26
electron microscopy
3.4
N.A.
N.A.
36253376
10.1038/s41467-022-33860-2
0
auth_asym_id
VH:VL
IGHV4
IGLV3
N
Q
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSA
VRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLG
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSA
VRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLG
16.556421
13.810156
133
107
133
107
133
107
48
10-1074 fab heavy chain
10-1074 fab light chain
homo sapiens
homo sapiens
B
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
30
13
0.93
HL
train
7ugn_I_L
7ugn
cryo-em structure of bg24 inferred germline fabs with germline cdr3s and 10-1074 fabs in complex with hiv-1 env immunogen bg505-sosipv4.1-gt1 - class 1
no
viral protein/immune system
2022-03-25
2022-10-26
electron microscopy
3.4
N.A.
N.A.
36253376
10.1038/s41467-022-33860-2
0
auth_asym_id
VH:VL
IGHV1
IGLV2
I
L
QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCATQLELDSSAGYAFDIWGQGTMVTVSSAS
QSALTQPRSVSGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCSSYEYFGGGTKLTVLS
QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCATQLELDSSAGYAFDIWGQGTMVTVSSAS
SALTQPRSVSGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCSSYEYFGGGTKLTVLS
14.492683
13.439016
125
106
125
105
125
105
37
bg24 inferred germline fab with germline cdr3s heavy chain
bg24 inferred germline fab with germline cdr3s light chain
homo sapiens
homo sapiens
C
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
52
16
0.62
HL
train
7ugn_O_R
7ugn
cryo-em structure of bg24 inferred germline fabs with germline cdr3s and 10-1074 fabs in complex with hiv-1 env immunogen bg505-sosipv4.1-gt1 - class 1
no
viral protein/immune system
2022-03-25
2022-10-26
electron microscopy
3.4
N.A.
N.A.
36253376
10.1038/s41467-022-33860-2
0
auth_asym_id
VH:VL
IGHV4
IGLV3
O
R
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSA
VRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLG
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSA
VRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLG
16.545216
13.848828
133
107
133
107
133
107
47
10-1074 fab heavy chain
10-1074 fab light chain
homo sapiens
homo sapiens
C
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
29
13
0.93
HL
train
7ugo_G_J
7ugo
cryo-em structure of bg24 inferred germline fabs with mature cdr3s and 10-1074 fabs in complex with hiv-1 env immunogen bg505-sosipv4.1-gt1
no
viral protein/immune system
2022-03-25
2022-10-26
electron microscopy
4.1
N.A.
N.A.
36253376
10.1038/s41467-022-33860-2
0
auth_asym_id
VH:VL
IGHV1
IGLV2
G
J
QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCATQVKLDSSAGYPFDIWGQGTMVTVSSAS
QSALTQPRSVSGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCSAFEYFGGGTKLTVLS
QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCATQVKLDSSAGYPFDIWGQGTMVTVSSAS
SALTQPRSVSGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCSAFEYFGGGTKLTVLS
14.616872
13.358169
125
106
125
105
125
105
36
bg24 inferred germline fab with mature cdr3s heavy chain
bg24 inferred germline fab with mature cdr3s light chain
homo sapiens
homo sapiens
A
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
55
18
0.64
HL
train
7ugo_M_P
7ugo
cryo-em structure of bg24 inferred germline fabs with mature cdr3s and 10-1074 fabs in complex with hiv-1 env immunogen bg505-sosipv4.1-gt1
no
viral protein/immune system
2022-03-25
2022-10-26
electron microscopy
4.1
N.A.
N.A.
36253376
10.1038/s41467-022-33860-2
0
auth_asym_id
VH:VL
IGHV4
IGLV3
M
P
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSA
VRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLG
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSA
VRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLG
16.522894
14.002654
133
107
133
107
133
107
49
10-1074 fab heavy chain
10-1074 fab light chain
homo sapiens
homo sapiens
A
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
28
14
1
HL
train
7ugo_H_K
7ugo
cryo-em structure of bg24 inferred germline fabs with mature cdr3s and 10-1074 fabs in complex with hiv-1 env immunogen bg505-sosipv4.1-gt1
no
viral protein/immune system
2022-03-25
2022-10-26
electron microscopy
4.1
N.A.
N.A.
36253376
10.1038/s41467-022-33860-2
0
auth_asym_id
VH:VL
IGHV1
IGLV2
H
K
QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCATQVKLDSSAGYPFDIWGQGTMVTVSSAS
QSALTQPRSVSGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCSAFEYFGGGTKLTVLS
QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCATQVKLDSSAGYPFDIWGQGTMVTVSSAS
SALTQPRSVSGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCSAFEYFGGGTKLTVLS
14.620732
13.346265
125
106
125
105
125
105
36
bg24 inferred germline fab with mature cdr3s heavy chain
bg24 inferred germline fab with mature cdr3s light chain
homo sapiens
homo sapiens
B
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
53
17
0.63
HL
train
7ugo_N_Q
7ugo
cryo-em structure of bg24 inferred germline fabs with mature cdr3s and 10-1074 fabs in complex with hiv-1 env immunogen bg505-sosipv4.1-gt1
no
viral protein/immune system
2022-03-25
2022-10-26
electron microscopy
4.1
N.A.
N.A.
36253376
10.1038/s41467-022-33860-2
0
auth_asym_id
VH:VL
IGHV4
IGLV3
N
Q
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSA
VRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLG
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSA
VRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLG
16.517147
13.995129
133
107
133
107
133
107
50
10-1074 fab heavy chain
10-1074 fab light chain
homo sapiens
homo sapiens
B
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
30
14
0.93
HL
train
7ugo_I_L
7ugo
cryo-em structure of bg24 inferred germline fabs with mature cdr3s and 10-1074 fabs in complex with hiv-1 env immunogen bg505-sosipv4.1-gt1
no
viral protein/immune system
2022-03-25
2022-10-26
electron microscopy
4.1
N.A.
N.A.
36253376
10.1038/s41467-022-33860-2
0
auth_asym_id
VH:VL
IGHV1
IGLV2
I
L
QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCATQVKLDSSAGYPFDIWGQGTMVTVSSAS
QSALTQPRSVSGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCSAFEYFGGGTKLTVLS
QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCATQVKLDSSAGYPFDIWGQGTMVTVSSAS
SALTQPRSVSGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCSAFEYFGGGTKLTVLS
14.60815
13.345719
125
106
125
105
125
105
35
bg24 inferred germline fab with mature cdr3s heavy chain
bg24 inferred germline fab with mature cdr3s light chain
homo sapiens
homo sapiens
C
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
52
17
0.63
HL
train
7ugo_O_R
7ugo
cryo-em structure of bg24 inferred germline fabs with mature cdr3s and 10-1074 fabs in complex with hiv-1 env immunogen bg505-sosipv4.1-gt1
no
viral protein/immune system
2022-03-25
2022-10-26
electron microscopy
4.1
N.A.
N.A.
36253376
10.1038/s41467-022-33860-2
0
auth_asym_id
VH:VL
IGHV4
IGLV3
O
R
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSA
VRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLG
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSA
VRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLG
16.503208
14.00838
133
107
133
107
133
107
50
10-1074 fab heavy chain
10-1074 fab light chain
homo sapiens
homo sapiens
C
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
28
14
0.93
HL
train
7ugm_H_L
7ugm
crystal structure of bg24-igl cdr3mat fab
no
immune system
2022-03-25
2022-11-09
x-ray diffraction
1.4
0.208
0.193
36253376
10.1038/s41467-022-33860-2
0
auth_asym_id
FabH:FabL
IGHV1
IGLV2
H
L
QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCATQVKLDSSAGYPFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
QSALTQPRSVSGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCSAFEYFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTE
QVQLVQSGAEVKKPGASVKVSCKASGYTFTGYYMHWVRQAPGQGLEWMGWINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCATQVKLDSSAGYPFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
SALTQPRSVSGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSKRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCSAFEYFGGGTKLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTE
24.516504
20.715433
225
209
225
201
225
208
94
bg24-igl cdr3mat fab heavy chain
bg24-igl cdr3mat fab light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7ugq_G_J
7ugq
cryo-em structure of bg24 fabs with an inferred germline cdrl1 and 10-1074 fabs in complex with hiv-1 env 6405-sosip.664
no
viral protein/immune system
2022-03-25
2022-11-09
electron microscopy
3.4
N.A.
N.A.
36253376
10.1038/s41467-022-33860-2
0
auth_asym_id
VH:VL
IGHV1
IGLV2
G
J
QVQLVQSRAEVKKPGASVKVSCEASGYNFVDHYIHWVRQAPGQAPQWVGWMNPRGGGVAYSQRFQGRVTMTRDTSIDTAYMQLNRLTSGDTAVYYCATQVKLDSSAGYPFDIWGQGTMVTVSSAS
SALTQPRSVSGSPGQSVNISCTGTSSDVGGYNYVSWYQQHPGRAPKLIIYEVNRRPSGVSDRFSGSKSGNTASLTISGLRTEDEADYFCSAFEYFGGGTKLTVLS
QVQLVQSRAEVKKPGASVKVSCEASGYNFVDHYIHWVRQAPGQAPQWVGWMNPRGGGVAYSQRFQGRVTMTRDTSIDTAYMQLNRLTSGDTAVYYCATQVKLDSSAGYPFDIWGQGTMVTVSSAS
SALTQPRSVSGSPGQSVNISCTGTSSDVGGYNYVSWYQQHPGRAPKLIIYEVNRRPSGVSDRFSGSKSGNTASLTISGLRTEDEADYFCSAFEYFGGGTKLTVLS
14.074882
12.953429
125
105
125
105
125
105
42
bg24 with an inferred germline cdrl1 fab heavy chain
bg24 with an inferred germline cdrl1 fab light chain
homo sapiens
homo sapiens
A
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
61
15
0.54
HL
train
7ugq_M_P
7ugq
cryo-em structure of bg24 fabs with an inferred germline cdrl1 and 10-1074 fabs in complex with hiv-1 env 6405-sosip.664
no
viral protein/immune system
2022-03-25
2022-11-09
electron microscopy
3.4
N.A.
N.A.
36253376
10.1038/s41467-022-33860-2
0
auth_asym_id
VH:VL
IGHV4
IGLV3
M
P
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSA
VRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLG
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSA
VRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLG
16.083565
13.577078
133
107
133
107
133
107
54
10-1074 fab heavy chain
10-1074 fab light chain
homo sapiens
homo sapiens
A
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
28
12
0.92
HL
train
7ugq_H_K
7ugq
cryo-em structure of bg24 fabs with an inferred germline cdrl1 and 10-1074 fabs in complex with hiv-1 env 6405-sosip.664
no
viral protein/immune system
2022-03-25
2022-11-09
electron microscopy
3.4
N.A.
N.A.
36253376
10.1038/s41467-022-33860-2
0
auth_asym_id
VH:VL
IGHV1
IGLV2
H
K
QVQLVQSRAEVKKPGASVKVSCEASGYNFVDHYIHWVRQAPGQAPQWVGWMNPRGGGVAYSQRFQGRVTMTRDTSIDTAYMQLNRLTSGDTAVYYCATQVKLDSSAGYPFDIWGQGTMVTVSSAS
SALTQPRSVSGSPGQSVNISCTGTSSDVGGYNYVSWYQQHPGRAPKLIIYEVNRRPSGVSDRFSGSKSGNTASLTISGLRTEDEADYFCSAFEYFGGGTKLTVLS
QVQLVQSRAEVKKPGASVKVSCEASGYNFVDHYIHWVRQAPGQAPQWVGWMNPRGGGVAYSQRFQGRVTMTRDTSIDTAYMQLNRLTSGDTAVYYCATQVKLDSSAGYPFDIWGQGTMVTVSSAS
SALTQPRSVSGSPGQSVNISCTGTSSDVGGYNYVSWYQQHPGRAPKLIIYEVNRRPSGVSDRFSGSKSGNTASLTISGLRTEDEADYFCSAFEYFGGGTKLTVLS
14.073509
12.933148
125
105
125
105
125
105
42
bg24 with an inferred germline cdrl1 fab heavy chain
bg24 with an inferred germline cdrl1 fab light chain
homo sapiens
homo sapiens
B
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
59
15
0.56
HL
train
7ugq_N_Q
7ugq
cryo-em structure of bg24 fabs with an inferred germline cdrl1 and 10-1074 fabs in complex with hiv-1 env 6405-sosip.664
no
viral protein/immune system
2022-03-25
2022-11-09
electron microscopy
3.4
N.A.
N.A.
36253376
10.1038/s41467-022-33860-2
0
auth_asym_id
VH:VL
IGHV4
IGLV3
N
Q
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSA
VRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLG
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSA
VRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLG
16.09081
13.536624
133
107
133
107
133
107
52
10-1074 fab heavy chain
10-1074 fab light chain
homo sapiens
homo sapiens
B
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
27
12
1
HL
train
7ugq_I_L
7ugq
cryo-em structure of bg24 fabs with an inferred germline cdrl1 and 10-1074 fabs in complex with hiv-1 env 6405-sosip.664
no
viral protein/immune system
2022-03-25
2022-11-09
electron microscopy
3.4
N.A.
N.A.
36253376
10.1038/s41467-022-33860-2
0
auth_asym_id
VH:VL
IGHV1
IGLV2
I
L
QVQLVQSRAEVKKPGASVKVSCEASGYNFVDHYIHWVRQAPGQAPQWVGWMNPRGGGVAYSQRFQGRVTMTRDTSIDTAYMQLNRLTSGDTAVYYCATQVKLDSSAGYPFDIWGQGTMVTVSSAS
SALTQPRSVSGSPGQSVNISCTGTSSDVGGYNYVSWYQQHPGRAPKLIIYEVNRRPSGVSDRFSGSKSGNTASLTISGLRTEDEADYFCSAFEYFGGGTKLTVLS
QVQLVQSRAEVKKPGASVKVSCEASGYNFVDHYIHWVRQAPGQAPQWVGWMNPRGGGVAYSQRFQGRVTMTRDTSIDTAYMQLNRLTSGDTAVYYCATQVKLDSSAGYPFDIWGQGTMVTVSSAS
SALTQPRSVSGSPGQSVNISCTGTSSDVGGYNYVSWYQQHPGRAPKLIIYEVNRRPSGVSDRFSGSKSGNTASLTISGLRTEDEADYFCSAFEYFGGGTKLTVLS
14.065289
12.933644
125
105
125
105
125
105
41
bg24 with an inferred germline cdrl1 fab heavy chain
bg24 with an inferred germline cdrl1 fab light chain
homo sapiens
homo sapiens
C
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
62
15
0.54
HL
train
7ugq_O_R
7ugq
cryo-em structure of bg24 fabs with an inferred germline cdrl1 and 10-1074 fabs in complex with hiv-1 env 6405-sosip.664
no
viral protein/immune system
2022-03-25
2022-11-09
electron microscopy
3.4
N.A.
N.A.
36253376
10.1038/s41467-022-33860-2
0
auth_asym_id
VH:VL
IGHV4
IGLV3
O
R
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSA
VRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLG
QVQLQESGPGLVKPSETLSVTCSVSGDSMNNYYWTWIRQSPGKGLEWIGYISDRESATYNPSLNSRVVISRDTSKNQLSLKLNSVTPADTAVYYCATARRGQRIYGVVSFGEFFYYYSMDVWGKGTTVTVSSA
VRPLSVALGETARISCGRQALGSRAVQWYQHRPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTRATLTISGVEAGDEADYYCHMWDSRSGFSWSFGGATRLTVLG
16.08409
13.548769
133
107
133
107
133
107
56
10-1074 fab heavy chain
10-1074 fab light chain
homo sapiens
homo sapiens
C
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
28
12
0.92
HL
train
7xda_B_C
7xda
cryo-em structure of sars-cov-2 delta rbd in complex with ba7208 and ba7125 fab (local refinement)
yes
viral protein
2022-03-26
2023-03-01
electron microscopy
2.98
N.A.
N.A.
36609558
10.1038/s41421-022-00509-9
0
auth_asym_id
FabH:FabL
IGHV4
IGKV3
B
C
EVQLQQWGAGLLKPSETLSLTCAVYGESFSGYYWSWIRQSPGKGLEWIGQINHSGNTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCARELGHDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
EIVMTQSPGTLSLSPGERATLSCRASQSISSSYLAWFQQKPGQAPRLLIYGASSRAPGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGDSPLTFGGGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLQQWGAGLLKPSETLSLTCAVYGESFSGYYWSWIRQSPGKGLEWIGQINHSGNTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCARELGHDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
EIVMTQSPGTLSLSPGERATLSCRASQSISSSYLAWFQQKPGQAPRLLIYGASSRAPGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGDSPLTFGGGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
23.688837
23.24042
220
215
220
215
220
215
99
ba7125 fab
ba7125 fab
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
59
18
0.6
HL
train
7xda_D_E
7xda
cryo-em structure of sars-cov-2 delta rbd in complex with ba7208 and ba7125 fab (local refinement)
yes
viral protein
2022-03-26
2023-03-01
electron microscopy
2.98
N.A.
N.A.
36609558
10.1038/s41421-022-00509-9
0
auth_asym_id
FabH:FabL
IGHV5
IGKV1
D
E
EVQLVQSGAEVKKPGESLKISCKGSGYSFTSYYWIGWVRQMPGKGLEWMGIVYPDDSDTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCVRHPGGGDWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTITSLQPDDFATYYCQQYDSFSWTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVQSGAEVKKPGESLKISCKGSGYSFTSYYWIGWVRQMPGKGLEWMGIVYPDDSDTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCVRHPGGGDWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT
DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTITSLQPDDFATYYCQQYDSFSWTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
23.907915
23.431267
227
214
227
214
227
214
98
ba7208 fab
ba7208 fab
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
32
15
0.88
HL
train
7xd2_I_L
7xd2
sars-cov-2 s ectodomain trimer in complex with neutralizing antibody 10-5b
yes
viral protein/immune system
2022-03-26
2023-07-12
electron microscopy
3.3
N.A.
N.A.
37069158
10.1038/s41467-023-37926-7
0
auth_asym_id
VH:VL
IGHV3
IGKV1
I
L
EVQLVESGGGLIQPGGSLRLSCAVSGFTVSRMSWVRQAPGKGLECVSVIYTGGNTDYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTALYYCVRGSGGIHDAFDIWGQGTMVTVSS
DIQMTQSPSSVSASVGDRVTITCRASQGISTWLAWYQQKPGKAPKVLINAASGLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQAHSFPPTFGPGTKLEIK
VQLVESGGGLIQPGGSLRLSCAVSGFTVSRMSWVRQAPGKGLECVSVIYTGGNTDYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTALYYCVRGSGGIHDAFDIWGQGTMVTVSS
DIQMTQSPSSVSASVGDRVTITCRASQGISTWLAWYQQKPGKAPKVLINAASGLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQAHSFPPTFGPGTKLE
13.370098
13.181057
117
107
116
105
116
105
35
h chain of antibody 10-5b
l chian of antibody 10-5b
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
35
19
0.9
HL
train
7xd2_E_H
7xd2
sars-cov-2 s ectodomain trimer in complex with neutralizing antibody 10-5b
yes
viral protein/immune system
2022-03-26
2023-07-12
electron microscopy
3.3
N.A.
N.A.
37069158
10.1038/s41467-023-37926-7
0
auth_asym_id
VH:VL
IGHV3
IGKV1
E
H
EVQLVESGGGLIQPGGSLRLSCAVSGFTVSRMSWVRQAPGKGLECVSVIYTGGNTDYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTALYYCVRGSGGIHDAFDIWGQGTMVTVSS
DIQMTQSPSSVSASVGDRVTITCRASQGISTWLAWYQQKPGKAPKVLINAASGLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQAHSFPPTFGPGTKLEIK
VQLVESGGGLIQPGGSLRLSCAVSGFTVSRMSWVRQAPGKGLECVSVIYTGGNTDYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTALYYCVRGSGGIHDAFDIWGQGTMVTVSS
DIQMTQSPSSVSASVGDRVTITCRASQGISTWLAWYQQKPGKAPKVLINAASGLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQAHSFPPTFGPGTKLE
13.370111
13.181067
117
107
116
105
116
105
35
h chain of antibody 10-5b
l chian of antibody 10-5b
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
35
19
0.9
HL
train
7xd2_D_J
7xd2
sars-cov-2 s ectodomain trimer in complex with neutralizing antibody 10-5b
yes
viral protein/immune system
2022-03-26
2023-07-12
electron microscopy
3.3
N.A.
N.A.
37069158
10.1038/s41467-023-37926-7
0
auth_asym_id
VH:VL
IGHV3
IGKV1
D
J
EVQLVESGGGLIQPGGSLRLSCAVSGFTVSRMSWVRQAPGKGLECVSVIYTGGNTDYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTALYYCVRGSGGIHDAFDIWGQGTMVTVSS
DIQMTQSPSSVSASVGDRVTITCRASQGISTWLAWYQQKPGKAPKVLINAASGLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQAHSFPPTFGPGTKLEIK
VQLVESGGGLIQPGGSLRLSCAVSGFTVSRMSWVRQAPGKGLECVSVIYTGGNTDYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTALYYCVRGSGGIHDAFDIWGQGTMVTVSS
DIQMTQSPSSVSASVGDRVTITCRASQGISTWLAWYQQKPGKAPKVLINAASGLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQAHSFPPTFGPGTKL
13.37009
13.09672
117
107
116
104
116
104
35
h chain of antibody 10-5b
l chian of antibody 10-5b
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
35
19
0.9
HL
train
7xdl_I_H
7xdl
cryo-em structure of sars-cov-2 delta spike protein in complex with ba7208 and ba7125 fab
no
viral protein
2022-03-27
2023-03-15
electron microscopy
3.08
N.A.
N.A.
36609558
10.1038/s41421-022-00509-9
0
auth_asym_id
FabH:FabL
IGHV4
IGKV3
I
H
EVQLQQWGAGLLKPSETLSLTCAVYGESFSGYYWSWIRQSPGKGLEWIGQINHSGNTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCARELGHDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
EIVMTQSPGTLSLSPGERATLSCRASQSISSSYLAWFQQKPGQAPRLLIYGASSRAPGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGDSPLTFGGGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFN
EVQLQQWGAGLLKPSETLSLTCAVYGESFSGYYWSWIRQSPGKGLEWIGQINHSGNTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCARELGHDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
EIVMTQSPGTLSLSPGERATLSCRASQSISSSYLAWFQQKPGQAPRLLIYGASSRAPGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGDSPLTFGGGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFN
23.629168
23.140905
215
211
215
211
215
211
84
ba7125 fab
ba7125 fab
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
61
20
0.65
HL
train
7xdl_M_L
7xdl
cryo-em structure of sars-cov-2 delta spike protein in complex with ba7208 and ba7125 fab
no
viral protein
2022-03-27
2023-03-15
electron microscopy
3.08
N.A.
N.A.
36609558
10.1038/s41421-022-00509-9
0
auth_asym_id
VH:VL
IGHV5
IGKV1
M
L
EVQLVQSGAEVKKPGESLKISCKGSGYSFTSYYWIGWVRQMPGKGLEWMGIVYPDDSDTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCVRHPGGGDWYFDLWGRGTLVTVS
DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTITSLQPDDFATYYCQQYDSFSWTFGQGTKLE
EVQLVQSGAEVKKPGESLKISCKGSGYSFTSYYWIGWVRQMPGKGLEWMGIVYPDDSDTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCVRHPGGGDWYFDLWGRGTLVTVS
DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTITSLQPDDFATYYCQQYDSFSWTFGQGTKLE
13.964661
13.224608
120
105
118
105
120
105
35
ba7208 fab
ba7208 fab
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
30
15
0.88
HL
train
7xdl_E_D
7xdl
cryo-em structure of sars-cov-2 delta spike protein in complex with ba7208 and ba7125 fab
no
viral protein
2022-03-27
2023-03-15
electron microscopy
3.08
N.A.
N.A.
36609558
10.1038/s41421-022-00509-9
0
auth_asym_id
FabH:FabL
IGHV4
IGKV3
E
D
EVQLQQWGAGLLKPSETLSLTCAVYGESFSGYYWSWIRQSPGKGLEWIGQINHSGNTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCARELGHDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
EIVMTQSPGTLSLSPGERATLSCRASQSISSSYLAWFQQKPGQAPRLLIYGASSRAPGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGDSPLTFGGGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFN
EVQLQQWGAGLLKPSETLSLTCAVYGESFSGYYWSWIRQSPGKGLEWIGQINHSGNTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCARELGHDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
EIVMTQSPGTLSLSPGERATLSCRASQSISSSYLAWFQQKPGQAPRLLIYGASSRAPGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGDSPLTFGGGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFN
23.343449
22.977724
215
211
215
211
215
211
82
ba7125 fab
ba7125 fab
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
61
18
0.6
HL
train
7xdl_P_O
7xdl
cryo-em structure of sars-cov-2 delta spike protein in complex with ba7208 and ba7125 fab
no
viral protein
2022-03-27
2023-03-15
electron microscopy
3.08
N.A.
N.A.
36609558
10.1038/s41421-022-00509-9
0
auth_asym_id
VH:VL
IGHV5
IGKV1
P
O
EVQLVQSGAEVKKPGESLKISCKGSGYSFTSYYWIGWVRQMPGKGLEWMGIVYPDDSDTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCVRHPGGGDWYFDLWGRGTLVTVS
DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTITSLQPDDFATYYCQQYDSFSWTFGQGTKLE
EVQLVQSGAEVKKPGESLKISCKGSGYSFTSYYWIGWVRQMPGKGLEWMGIVYPDDSDTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCVRHPGGGDWYFDLWGRGTLVTVS
DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTITSLQPDDFATYYCQQYDSFSWTFGQGTKLE
14.028869
13.243199
120
105
118
105
120
105
36
ba7208 fab
ba7208 fab
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
33
18
0.9
HL
train
7xdl_G_F
7xdl
cryo-em structure of sars-cov-2 delta spike protein in complex with ba7208 and ba7125 fab
no
viral protein
2022-03-27
2023-03-15
electron microscopy
3.08
N.A.
N.A.
36609558
10.1038/s41421-022-00509-9
0
auth_asym_id
FabH:FabL
IGHV4
IGKV3
G
F
EVQLQQWGAGLLKPSETLSLTCAVYGESFSGYYWSWIRQSPGKGLEWIGQINHSGNTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCARELGHDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
EIVMTQSPGTLSLSPGERATLSCRASQSISSSYLAWFQQKPGQAPRLLIYGASSRAPGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGDSPLTFGGGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFN
EVQLQQWGAGLLKPSETLSLTCAVYGESFSGYYWSWIRQSPGKGLEWIGQINHSGNTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTAADTAVYYCARELGHDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
EIVMTQSPGTLSLSPGERATLSCRASQSISSSYLAWFQQKPGQAPRLLIYGASSRAPGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGDSPLTFGGGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFN
23.215797
23.066874
215
211
215
211
215
211
81
ba7125 fab
ba7125 fab
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
66
22
0.63
HL
train
7xdl_K_J
7xdl
cryo-em structure of sars-cov-2 delta spike protein in complex with ba7208 and ba7125 fab
no
viral protein
2022-03-27
2023-03-15
electron microscopy
3.08
N.A.
N.A.
36609558
10.1038/s41421-022-00509-9
0
auth_asym_id
VH:VL
IGHV5
IGKV1
K
J
EVQLVQSGAEVKKPGESLKISCKGSGYSFTSYYWIGWVRQMPGKGLEWMGIVYPDDSDTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCVRHPGGGDWYFDLWGRGTLVTVS
DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTITSLQPDDFATYYCQQYDSFSWTFGQGTKLE
EVQLVQSGAEVKKPGESLKISCKGSGYSFTSYYWIGWVRQMPGKGLEWMGIVYPDDSDTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCVRHPGGGDWYFDLWGRGTLVTVS
DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTITSLQPDDFATYYCQQYDSFSWTFGQGTKLE
14.047341
13.202196
120
105
118
105
120
105
37
ba7208 fab
ba7208 fab
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
35
19
0.9
HL
train
7zce_G
7zce
sars-cov-2 spike protein in complex with the single chain fragment scfv76
yes
viral protein
2022-03-28
2022-10-12
electron microscopy
3.5
N.A.
N.A.
36114671
10.1016/j.ymthe.2022.09.010
0
auth_asym_id
scFv
N.A.
N.A.
G
N.A.
RTMEEVQLLQSAGGLVQPGGSLRLSCAASGFTVSANYMSWVRQAPGKGLEWVSVIYPGGSTFYADSVKGRFTISRDNSKNTLYLQMNSLRVEDTAVYYCARDLSVAGAFDIWGQGTLVTVSSGGGGSGGGGSGGGGSEIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPYTFGQGTKLEIKRAAAGDYKDDDDKHHHHHH
N.A.
EVQLLQSAGGLVQPGGSLRLSCAASGFTVSANYMSWVRQAPGKGLEWVSVIYPGGSTFYADSVKGRFTISRDNSKNTLYLQMNSLRVEDTAVYYCARDLSVAGAFDIWGQGTLVTVSSGGGGSGGGGSGGGGSEIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPYTFGQGTKLEIK
N.A.
17.907545
0
264
0
225
0
241
0
0
scfv76 single chain fragment
N.A.
homo sapiens
N.A.
A
protein
spike glycoprotein,fibritin
severe acute respiratory syndrome coronavirus 2
52
24
0.92
H_only
train
7zce_F
7zce
sars-cov-2 spike protein in complex with the single chain fragment scfv76
yes
viral protein
2022-03-28
2022-10-12
electron microscopy
3.5
N.A.
N.A.
36114671
10.1016/j.ymthe.2022.09.010
0
auth_asym_id
scFv
N.A.
N.A.
F
N.A.
RTMEEVQLLQSAGGLVQPGGSLRLSCAASGFTVSANYMSWVRQAPGKGLEWVSVIYPGGSTFYADSVKGRFTISRDNSKNTLYLQMNSLRVEDTAVYYCARDLSVAGAFDIWGQGTLVTVSSGGGGSGGGGSGGGGSEIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPYTFGQGTKLEIKRAAAGDYKDDDDKHHHHHH
N.A.
EVQLLQSAGGLVQPGGSLRLSCAASGFTVSANYMSWVRQAPGKGLEWVSVIYPGGSTFYADSVKGRFTISRDNSKNTLYLQMNSLRVEDTAVYYCARDLSVAGAFDIWGQGTLVTVSSGGGGSGGGGSGGGGSEIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPYTFGQGTKLEIK
N.A.
17.892946
0
264
0
225
0
241
0
0
scfv76 single chain fragment
N.A.
homo sapiens
N.A.
B
protein
spike glycoprotein,fibritin
severe acute respiratory syndrome coronavirus 2
55
26
0.9
H_only
train
7zce_E
7zce
sars-cov-2 spike protein in complex with the single chain fragment scfv76
yes
viral protein
2022-03-28
2022-10-12
electron microscopy
3.5
N.A.
N.A.
36114671
10.1016/j.ymthe.2022.09.010
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
RTMEEVQLLQSAGGLVQPGGSLRLSCAASGFTVSANYMSWVRQAPGKGLEWVSVIYPGGSTFYADSVKGRFTISRDNSKNTLYLQMNSLRVEDTAVYYCARDLSVAGAFDIWGQGTLVTVSSGGGGSGGGGSGGGGSEIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPYTFGQGTKLEIKRAAAGDYKDDDDKHHHHHH
N.A.
EVQLLQSAGGLVQPGGSLRLSCAASGFTVSANYMSWVRQAPGKGLEWVSVIYPGGSTFYADSVKGRFTISRDNSKNTLYLQMNSLRVEDTAVYYCARDLSVAGAFDIWGQGTLVTVSSGGGGSGGGGSGGGGSEIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPYTFGQGTKLEIK
N.A.
17.902706
0
264
0
225
0
241
0
0
scfv76 single chain fragment
N.A.
homo sapiens
N.A.
C
protein
spike glycoprotein,fibritin
severe acute respiratory syndrome coronavirus 2
55
26
0.93
H_only
train
7zcf_E
7zcf
sars-cov-2 spike rbd in complex with the single chain fragment scfv76 (focused refinement)
yes
viral protein
2022-03-28
2022-10-12
electron microscopy
4
N.A.
N.A.
36114671
10.1016/j.ymthe.2022.09.010
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
RTMEEVQLLQSAGGLVQPGGSLRLSCAASGFTVSANYMSWVRQAPGKGLEWVSVIYPGGSTFYADSVKGRFTISRDNSKNTLYLQMNSLRVEDTAVYYCARDLSVAGAFDIWGQGTLVTVSSGGGGSGGGGSGGGGSEIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPYTFGQGTKLEIKRAAAGDYKDDDDKHHHHHH
N.A.
EVQLLQSAGGLVQPGGSLRLSCAASGFTVSANYMSWVRQAPGKGLEWVSVIYPGGSTFYADSVKGRFTISRDNSKNTLYLQMNSLRVEDTAVYYCARDLSVAGAFDIWGQGTLVTVSSGGGGSGGGGSGGGGSEIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPYTFGQGTKLEIK
N.A.
17.960491
0
264
0
225
0
241
0
0
scfv76 single chain fragment
N.A.
homo sapiens
N.A.
C
protein
spike glycoprotein,fibritin
severe acute respiratory syndrome coronavirus 2
55
26
0.93
H_only
train
7uhz_H_L
7uhz
post-fusion ectodomain of hsv-1 gb in complex with bmpc-23 fab
no
viral protein
2022-03-28
2023-02-08
electron microscopy
3.3
N.A.
N.A.
36454639
10.1172/JCI161968
0
auth_asym_id
VH:VL
IGHV1
IGKV7
H
L
QVQLQQSGPELVKPGASVKLSCKASGYSFTTYDINWVKERPGQGLEWIGWIYPREGSTNYNEKFRGKATLTADTSSSTAYMELHSLTSEDSAVYFCATYGSSRYYTMDYWGQGTSVTVSSA
DIVLTQSPTSLAVSLGQRATISCRASESVDNFGISFMNWFQQKPGQPPKLLIYAASNLGSGVPARFSGSGSGTDFSLNIHPMEDDDTAMYFCQQSKEVPLTFGAGTKLELKR
QVQLQQSGPELVKPGASVKLSCKASGYSFTTYDINWVKERPGQGLEWIGWIYPREGSTNYNEKFRGKATLTADTSSSTAYMELHSLTSEDSAVYFCATYGSSRYYTMDYWGQGTSVTVSS
DIVLTQSPTSLAVSLGQRATISCRASESVDNFGISFMNWFQQKPGQPPKLLIYAASNLGSGVPARFSGSGSGTDFSLNIHPMEDDDTAMYFCQQSKEVPLTFGAGTKLELK
13.875941
13.327369
121
112
120
111
120
111
41
bmpc-23 fab heavy chain
bmpc-23 fab light chain
mus musculus
mus musculus
A
protein
envelope glycoprotein b
human alphaherpesvirus 1 strain kos
44
21
0.88
HL
train