PDB_ID_chain stringlengths 6 10 | PDB_ID stringlengths 4 4 | Title stringlengths 4 230 | Mutation(s) stringclasses 2
values | Classification stringclasses 305
values | Deposit_date stringdate 1976-03-17 00:00:00 2026-01-20 00:00:00 | Release_date stringdate 1976-05-19 00:00:00 2026-02-25 00:00:00 | Method stringclasses 5
values | Resolution stringclasses 459
values | R_free stringclasses 227
values | R_work stringclasses 211
values | PMID stringlengths 4 8 | DOI stringlengths 4 68 | Model_index int64 0 76 | Asym_ID_type stringclasses 2
values | Ab_type stringclasses 30
values | H_subgroup stringclasses 8
values | L_subgroup stringclasses 19
values | H_chain_ID stringclasses 60
values | L_chain_ID stringclasses 58
values | H_fas_seq stringlengths 4 919 | L_fas_seq stringlengths 4 627 | H_filled_pdb_seq stringlengths 4 896 | L_filled_pdb_seq stringlengths 4 523 | H_mean_radius float64 0 79.7 | L_mean_radius float64 0 84.3 | H_fas_seq_len int64 0 919 | L_fas_seq_len int64 0 627 | H_pdb_seq_len int64 0 879 | L_pdb_seq_len int64 0 523 | H_filled_seq_len int64 0 896 | L_filled_seq_len int64 0 523 | HL_inf_res_num int64 0 175 | H_mol_name stringlengths 2 331 | L_mol_name stringlengths 2 151 | H_species stringclasses 68
values | L_species stringclasses 42
values | Ag_chain_ID(s) stringclasses 279
values | Ag_type(s) stringclasses 16
values | Ag_mol_name(s) stringlengths 2 390 | Ag_species stringclasses 743
values | Ab_ag_inf_res_num stringlengths 1 11 | CDR_inf_res_num stringclasses 444
values | CDR_inf_res_ratio stringlengths 1 19 | hl_label stringclasses 3
values | split stringclasses 1
value |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
7uop_B_E | 7uop | prefusion-stabilized nipah virus fusion protein complexed with fab 4h3 | no | viral protein/immune system | 2022-04-13 | 2023-03-29 | electron microscopy | 2.8 | N.A. | N.A. | 36932063 | 10.1038/s41467-023-36995-y | 0 | auth_asym_id | VH:VL | IGHV7 | IGKV1 | B | E | MEFGLSWIFLAAILKGVQCQIQLVQSGPELKKPGETVKISCKASGYTFRNYGVNWVKQGPGKDLKWMGWINTLNGEPTYADDFKRRFAFSLETSATTAFLQINNLKNEDTATYFCARTFYDGYYYAMDYWGQGTSVTVSA | MEFGLSWIFLAAILKGVQCENVLTQSPTIMAASLGQKVTMTCSANSSVSSSYLHWYHQKSGASPKPLIHRTSNLASGVPARFIGSGSGTSFSLTISSVEAEDDATYYCQQWSGYPFITFGSGTKLEIK | QIQLVQSGPELKKPGETVKISCKASGYTFRNYGVNWVKQGPGKDLKWMGWINTLNGEPTYADDFKRRFAFSLETSATTAFLQINNLKNEDTATYFCARTFYDGYYYAMDYWGQGTSVTVS | NVLTQSPTIMAASLGQKVTMTCSANSSVSSSYLHWYHQKSGASPKPLIHRTSNLASGVPARFIGSGSGTSFSLTISSVEAEDDATYYCQQWSGYPFITFGSGTKLEIK | 14.657677 | 13.499681 | 140 | 128 | 120 | 108 | 120 | 108 | 38 | fab 4h3 heavy chain | fab 4h3 light chain | mus musculus | mus musculus | G | protein | fusion glycoprotein f0 | nipah henipavirus | 39 | 16 | 0.94 | HL | train |
7xil_H_L | 7xil | sars-cov-2-beta-rbd and b38-gwp/p-vk antibody complex | yes | viral protein/immune system | 2022-04-13 | 2023-04-26 | x-ray diffraction | 2.91 | 0.256 | 0.206 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | GDEVQLVESGGGLVQPGGSLRLSCAASGFIVGWNYMSWVRQAPGKGLEWVSVIYPGGSTYYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYCAREAYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | GDDIVMTQSPSFLSASVGDRVTITCRASQGIPSSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | EVQLVESGGGLVQPGGSLRLSCAASGFIVGWNYMSWVRQAPGKGLEWVSVIYPGGSTYYADSVKGRFTISRHNSKNTLYLQMNSLRAEDTAVYYCAREAYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | DDIVMTQSPSFLSASVGDRVTITCRASQGIPSSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQQLNSYPPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.38524 | 22.590105 | 222 | 219 | 212 | 217 | 215 | 217 | 92 | b38 fab heavy chain | b38 fab light chain | homo sapiens | homo sapiens | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 62 | 23 | 0.72 | HL | train |
7uoj_D_E | 7uoj | the cryoem structure of n49-p9.6-fr3 and pgt121 fabs in complex with bg505 sosip.664 | yes | viral protein/immune system | 2022-04-13 | 2023-05-03 | electron microscopy | 4.02 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | D | E | HVQLVQSGGGVKKIGAAVRISCEVSGYNFMDQFINWVRQAPGQGLEWMGWMNPIYGQVNYSWRFQGRVTMTRQLSQDPDDPDWGTAFMELRGLRVDDTAVYYCARGPSGENYPFHYWGQGVRVVVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | LTQPASMSASPGQSVTISCSGTRHIISAWFQQYPGKPPKLIIFDDDKRPSGVPSRFSASRPGDTASLTISNVQPEDEATYICNTYEFFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLVSDFYPGAVTVAWKADGSPVKVGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCRVTHEGSTVEKTVAPAECS | HVQLVQSGGGVKKIGAAVRISCEVSGYNFMDQFINWVRQAPGQGLEWMGWMNPIYGQVNYSWRFQGRVTMTRQLSQDPDDPDWGTAFMELRGLRVDDTAVYYCARGPSGENYPFHYWGQGVRVVVS | LTQPASMSASPGQSVTISCSGTRHIISAWFQQYPGKPPKLIIFDDDKRPSGVPSRFSASRPGDTASLTISNVQPEDEATYICNTYEFFGGGTKLTVLG | 14.555555 | 12.873013 | 230 | 203 | 126 | 98 | 126 | 98 | 31 | n49-p9.6-fr3 fab heavy chain | n49-p9.6-fr3 fab light chain | homo sapiens | homo sapiens | A | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 56 | 13 | 0.5 | HL | train |
7uoj_d_e | 7uoj | the cryoem structure of n49-p9.6-fr3 and pgt121 fabs in complex with bg505 sosip.664 | yes | viral protein/immune system | 2022-04-13 | 2023-05-03 | electron microscopy | 4.02 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV3 | d | e | QMQLQESGPGLVKPSETLSLTCSVSGASISDSYWSWIRRSPGKGLEWIGYVHKSGDTNYSPSLKSRVNLSLDTSKNQVSLSLVAATAADSGKYYCARTLHGRRIYGIVAFNEWFTYFYMDVWGNGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | QVQIDISVAPGETARISCGEKSLGSRAVQWYQHRAGQAPSLIIYNNQDRPSGIPERFSGSPDSPFGTTATLTITSVEAGDEADYYCHIWDSRVPTKWVFGGGTTLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTEC | QMQLQESGPGLVKPSETLSLTCSVSGASISDSYWSWIRRSPGKGLEWIGYVHKSGDTNYSPSLKSRVNLSLDTSKNQVSLSLVAATAADSGKYYCARTLHGRRIYGIVAFNEWFTYFYMDVWGNGTQVTVSSA | QVQIDISVAPGETARISCGEKSLGSRAVQWYQHRAGQAPSLIIYNNQDRPSGIPERFSGSPDSPFGTTATLTITSVEAGDEADYYCHIWDSRVPTKWVFGGGTTLTVL | 16.16526 | 13.698255 | 235 | 213 | 133 | 108 | 133 | 108 | 49 | pgt121 fab heavy chain | pgt121 fab light chain | homo sapiens | homo sapiens | A | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 33 | 16 | 1 | HL | train |
7uoj_H_L | 7uoj | the cryoem structure of n49-p9.6-fr3 and pgt121 fabs in complex with bg505 sosip.664 | yes | viral protein/immune system | 2022-04-13 | 2023-05-03 | electron microscopy | 4.02 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | H | L | HVQLVQSGGGVKKIGAAVRISCEVSGYNFMDQFINWVRQAPGQGLEWMGWMNPIYGQVNYSWRFQGRVTMTRQLSQDPDDPDWGTAFMELRGLRVDDTAVYYCARGPSGENYPFHYWGQGVRVVVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | LTQPASMSASPGQSVTISCSGTRHIISAWFQQYPGKPPKLIIFDDDKRPSGVPSRFSASRPGDTASLTISNVQPEDEATYICNTYEFFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLVSDFYPGAVTVAWKADGSPVKVGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCRVTHEGSTVEKTVAPAECS | HVQLVQSGGGVKKIGAAVRISCEVSGYNFMDQFINWVRQAPGQGLEWMGWMNPIYGQVNYSWRFQGRVTMTRQLSQDPDDPDWGTAFMELRGLRVDDTAVYYCARGPSGENYPFHYWGQGVRVVVS | LTQPASMSASPGQSVTISCSGTRHIISAWFQQYPGKPPKLIIFDDDKRPSGVPSRFSASRPGDTASLTISNVQPEDEATYICNTYEFFGGGTKLTVLG | 14.510935 | 12.855016 | 230 | 203 | 126 | 98 | 126 | 98 | 31 | n49-p9.6-fr3 fab heavy chain | n49-p9.6-fr3 fab light chain | homo sapiens | homo sapiens | G | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 52 | 11 | 0.46 | HL | train |
7uoj_h_l | 7uoj | the cryoem structure of n49-p9.6-fr3 and pgt121 fabs in complex with bg505 sosip.664 | yes | viral protein/immune system | 2022-04-13 | 2023-05-03 | electron microscopy | 4.02 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV3 | h | l | QMQLQESGPGLVKPSETLSLTCSVSGASISDSYWSWIRRSPGKGLEWIGYVHKSGDTNYSPSLKSRVNLSLDTSKNQVSLSLVAATAADSGKYYCARTLHGRRIYGIVAFNEWFTYFYMDVWGNGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | QVQIDISVAPGETARISCGEKSLGSRAVQWYQHRAGQAPSLIIYNNQDRPSGIPERFSGSPDSPFGTTATLTITSVEAGDEADYYCHIWDSRVPTKWVFGGGTTLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTEC | QMQLQESGPGLVKPSETLSLTCSVSGASISDSYWSWIRRSPGKGLEWIGYVHKSGDTNYSPSLKSRVNLSLDTSKNQVSLSLVAATAADSGKYYCARTLHGRRIYGIVAFNEWFTYFYMDVWGNGTQVTVSSA | QVQIDISVAPGETARISCGEKSLGSRAVQWYQHRAGQAPSLIIYNNQDRPSGIPERFSGSPDSPFGTTATLTITSVEAGDEADYYCHIWDSRVPTKWVFGGGTTLTVL | 16.195135 | 13.681391 | 235 | 213 | 133 | 108 | 133 | 108 | 50 | pgt121 fab heavy chain | pgt121 fab light chain | homo sapiens | homo sapiens | G | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 31 | 15 | 1 | HL | train |
7uoj_K_M | 7uoj | the cryoem structure of n49-p9.6-fr3 and pgt121 fabs in complex with bg505 sosip.664 | yes | viral protein/immune system | 2022-04-13 | 2023-05-03 | electron microscopy | 4.02 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | K | M | HVQLVQSGGGVKKIGAAVRISCEVSGYNFMDQFINWVRQAPGQGLEWMGWMNPIYGQVNYSWRFQGRVTMTRQLSQDPDDPDWGTAFMELRGLRVDDTAVYYCARGPSGENYPFHYWGQGVRVVVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | LTQPASMSASPGQSVTISCSGTRHIISAWFQQYPGKPPKLIIFDDDKRPSGVPSRFSASRPGDTASLTISNVQPEDEATYICNTYEFFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLVSDFYPGAVTVAWKADGSPVKVGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCRVTHEGSTVEKTVAPAECS | HVQLVQSGGGVKKIGAAVRISCEVSGYNFMDQFINWVRQAPGQGLEWMGWMNPIYGQVNYSWRFQGRVTMTRQLSQDPDDPDWGTAFMELRGLRVDDTAVYYCARGPSGENYPFHYWGQGVRVVVS | LTQPASMSASPGQSVTISCSGTRHIISAWFQQYPGKPPKLIIFDDDKRPSGVPSRFSASRPGDTASLTISNVQPEDEATYICNTYEFFGGGTKLTVLG | 14.504204 | 12.874477 | 230 | 203 | 126 | 98 | 126 | 98 | 31 | n49-p9.6-fr3 fab heavy chain | n49-p9.6-fr3 fab light chain | homo sapiens | homo sapiens | I | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 57 | 13 | 0.48 | HL | train |
7uoj_k_m | 7uoj | the cryoem structure of n49-p9.6-fr3 and pgt121 fabs in complex with bg505 sosip.664 | yes | viral protein/immune system | 2022-04-13 | 2023-05-03 | electron microscopy | 4.02 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV3 | k | m | QMQLQESGPGLVKPSETLSLTCSVSGASISDSYWSWIRRSPGKGLEWIGYVHKSGDTNYSPSLKSRVNLSLDTSKNQVSLSLVAATAADSGKYYCARTLHGRRIYGIVAFNEWFTYFYMDVWGNGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | QVQIDISVAPGETARISCGEKSLGSRAVQWYQHRAGQAPSLIIYNNQDRPSGIPERFSGSPDSPFGTTATLTITSVEAGDEADYYCHIWDSRVPTKWVFGGGTTLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTEC | QMQLQESGPGLVKPSETLSLTCSVSGASISDSYWSWIRRSPGKGLEWIGYVHKSGDTNYSPSLKSRVNLSLDTSKNQVSLSLVAATAADSGKYYCARTLHGRRIYGIVAFNEWFTYFYMDVWGNGTQVTVSSA | QVQIDISVAPGETARISCGEKSLGSRAVQWYQHRAGQAPSLIIYNNQDRPSGIPERFSGSPDSPFGTTATLTITSVEAGDEADYYCHIWDSRVPTKWVFGGGTTLTVL | 16.150593 | 13.688297 | 235 | 213 | 133 | 108 | 133 | 108 | 51 | pgt121 fab heavy chain | pgt121 fab light chain | homo sapiens | homo sapiens | I | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 32 | 15 | 1 | HL | train |
7up9_H_L | 7up9 | prefusion-stabilized nipah virus fusion protein complexed with fab 2d3 | no | viral protein/immune system | 2022-04-14 | 2023-03-29 | electron microscopy | 2.9 | N.A. | N.A. | 36932063 | 10.1038/s41467-023-36995-y | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV2 | H | L | MEFGLSWIFLAAILKGVQCQVQLKQSGPGLVAPSQSLSITCTVSGFSLTSYALSWVRQPPGKGLEWLGVIWVGGVTNYNSALKSRLTISKDNSKSQVFLKMNSLQSEDTARYYCASRHLSTGAMDYWGQGTSVTVSA | MEFGLSWIFLAAILKGVQCDVLMTQSPLSLPVSLGDQASISCRSSQSIVHSNGDTYFEWYLQKPGQSPKLLIYKVSNRFSGVPNRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSYVPYTFGGGTKLEIK | QVQLKQSGPGLVAPSQSLSITCTVSGFSLTSYALSWVRQPPGKGLEWLGVIWVGGVTNYNSALKSRLTISKDNSKSQVFLKMNSLQSEDTARYYCASRHLSTGAMDYWGQGTSVTVSA | DVLMTQSPLSLPVSLGDQASISCRSSQSIVHSNGDTYFEWYLQKPGQSPKLLIYKVSNRFSGVPNRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSYVPYTFGGGTKLEIK | 13.808519 | 13.795483 | 137 | 131 | 118 | 112 | 118 | 112 | 44 | fab 2d3 heavy chain | fab 2d3 light chain | mus musculus | mus musculus | G | protein | fusion glycoprotein f0 | nipah henipavirus | 30 | 15 | 0.94 | HL | train |
7upa_H_L | 7upa | prefusion-stabilized nipah virus fusion protein complexed with fab 1h8 | no | viral protein/immune system | 2022-04-14 | 2023-03-29 | electron microscopy | 2.5 | N.A. | N.A. | 36932063 | 10.1038/s41467-023-36995-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | H | L | MEFGLSWIFLAAILKGVQCEVQLQQSGPELVKPGASVKISCKASGYSFTGYTMNWVKQSHGKNLEWIGLINPFIGGTRYNQKFKGKATLTVDKSSRTAYMELLSLTSEDSAVYYCAREADYDWYFDVWGAGTTVTVSS | MEFGLSWIFLAAILKGVQCDIQMTQTTSSLSASLGDRVTISCRASQDISNYLHWYQQKPDGTVNLLIFYTSRLHSGVPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPRTFGGGTKLEIK | EVQLQQSGPELVKPGASVKISCKASGYSFTGYTMNWVKQSHGKNLEWIGLINPFIGGTRYNQKFKGKATLTVDKSSRTAYMELLSLTSEDSAVYYCAREADYDWYFDVWGAGTTVTVS | DIQMTQTTSSLSASLGDRVTISCRASQDISNYLHWYQQKPDGTVNLLIFYTSRLHSGVPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPRTFGGGTKLEI | 14.157673 | 13.501443 | 138 | 126 | 118 | 106 | 118 | 106 | 38 | fab 1h8 heavy chain | fab 1h8 light chain | mus musculus | mus musculus | A | protein | fusion glycoprotein f0 | nipah henipavirus | 51 | 17 | 0.63 | HL | train |
7upa_C_F | 7upa | prefusion-stabilized nipah virus fusion protein complexed with fab 1h8 | no | viral protein/immune system | 2022-04-14 | 2023-03-29 | electron microscopy | 2.5 | N.A. | N.A. | 36932063 | 10.1038/s41467-023-36995-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | C | F | MEFGLSWIFLAAILKGVQCEVQLQQSGPELVKPGASVKISCKASGYSFTGYTMNWVKQSHGKNLEWIGLINPFIGGTRYNQKFKGKATLTVDKSSRTAYMELLSLTSEDSAVYYCAREADYDWYFDVWGAGTTVTVSS | MEFGLSWIFLAAILKGVQCDIQMTQTTSSLSASLGDRVTISCRASQDISNYLHWYQQKPDGTVNLLIFYTSRLHSGVPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPRTFGGGTKLEIK | EVQLQQSGPELVKPGASVKISCKASGYSFTGYTMNWVKQSHGKNLEWIGLINPFIGGTRYNQKFKGKATLTVDKSSRTAYMELLSLTSEDSAVYYCAREADYDWYFDVWGAGTTVTVS | DIQMTQTTSSLSASLGDRVTISCRASQDISNYLHWYQQKPDGTVNLLIFYTSRLHSGVPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPRTFGGGTKLEI | 14.15571 | 13.501735 | 138 | 126 | 118 | 106 | 118 | 106 | 39 | fab 1h8 heavy chain | fab 1h8 light chain | mus musculus | mus musculus | D | protein | fusion glycoprotein f0 | nipah henipavirus | 49 | 18 | 0.67 | HL | train |
7upa_B_E | 7upa | prefusion-stabilized nipah virus fusion protein complexed with fab 1h8 | no | viral protein/immune system | 2022-04-14 | 2023-03-29 | electron microscopy | 2.5 | N.A. | N.A. | 36932063 | 10.1038/s41467-023-36995-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | B | E | MEFGLSWIFLAAILKGVQCEVQLQQSGPELVKPGASVKISCKASGYSFTGYTMNWVKQSHGKNLEWIGLINPFIGGTRYNQKFKGKATLTVDKSSRTAYMELLSLTSEDSAVYYCAREADYDWYFDVWGAGTTVTVSS | MEFGLSWIFLAAILKGVQCDIQMTQTTSSLSASLGDRVTISCRASQDISNYLHWYQQKPDGTVNLLIFYTSRLHSGVPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPRTFGGGTKLEIK | EVQLQQSGPELVKPGASVKISCKASGYSFTGYTMNWVKQSHGKNLEWIGLINPFIGGTRYNQKFKGKATLTVDKSSRTAYMELLSLTSEDSAVYYCAREADYDWYFDVWGAGTTVTVS | DIQMTQTTSSLSASLGDRVTISCRASQDISNYLHWYQQKPDGTVNLLIFYTSRLHSGVPSRFSGSGSGTDYSLTISNLEQEDIATYFCQQGNTLPRTFGGGTKLEI | 14.172546 | 13.495007 | 138 | 126 | 118 | 106 | 118 | 106 | 41 | fab 1h8 heavy chain | fab 1h8 light chain | mus musculus | mus musculus | D;G | protein;protein | fusion glycoprotein f0;fusion glycoprotein f0 | nipah henipavirus;nipah henipavirus | 11;54 | 5;19 | 0.83;0.63 | HL | train |
7upb_B_E | 7upb | prefusion-stabilized nipah virus fusion protein complexed with fab 1h1 | no | viral protein/immune system | 2022-04-14 | 2023-03-29 | electron microscopy | 3 | N.A. | N.A. | 36932063 | 10.1038/s41467-023-36995-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | B | E | VQLQQSGAELMRPGASMKISCKATGYTFSSYWIDWVKQRPGHGLEWIGEILPGSGDTNYNENFKGKAAFTADTSSNTAYMQLTSLTSEDSAVFYCARGGRYHGQGFFDYWGQGTTLTVSS | IQMTQSPASLSASVGETVTITCRPSENVHIYLAWYQQKQGKSPQLLVYNAKTLADGVPSRFSGSASGTQFSLKINSLQPEDFGSYYCQHFWSIPYTFGGGTKLEIK | VQLQQSGAELMRPGASMKISCKATGYTFSSYWIDWVKQRPGHGLEWIGEILPGSGDTNYNENFKGKAAFTADTSSNTAYMQLTSLTSEDSAVFYCARGGRYHGQGFFDYWGQGTTLTVSS | IQMTQSPASLSASVGETVTITCRPSENVHIYLAWYQQKQGKSPQLLVYNAKTLADGVPSRFSGSASGTQFSLKINSLQPEDFGSYYCQHFWSIPYTFGGGTKLEIK | 13.820571 | 13.23759 | 120 | 106 | 120 | 106 | 120 | 106 | 38 | fab 1h1 heavy chain | fab 1h1 light chain | mus musculus | mus musculus | A | protein | fusion glycoprotein f0 | nipah henipavirus | 32 | 16 | 0.89 | HL | train |
7upb_C_F | 7upb | prefusion-stabilized nipah virus fusion protein complexed with fab 1h1 | no | viral protein/immune system | 2022-04-14 | 2023-03-29 | electron microscopy | 3 | N.A. | N.A. | 36932063 | 10.1038/s41467-023-36995-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | C | F | VQLQQSGAELMRPGASMKISCKATGYTFSSYWIDWVKQRPGHGLEWIGEILPGSGDTNYNENFKGKAAFTADTSSNTAYMQLTSLTSEDSAVFYCARGGRYHGQGFFDYWGQGTTLTVSS | IQMTQSPASLSASVGETVTITCRPSENVHIYLAWYQQKQGKSPQLLVYNAKTLADGVPSRFSGSASGTQFSLKINSLQPEDFGSYYCQHFWSIPYTFGGGTKLEIK | VQLQQSGAELMRPGASMKISCKATGYTFSSYWIDWVKQRPGHGLEWIGEILPGSGDTNYNENFKGKAAFTADTSSNTAYMQLTSLTSEDSAVFYCARGGRYHGQGFFDYWGQGTTLTVSS | IQMTQSPASLSASVGETVTITCRPSENVHIYLAWYQQKQGKSPQLLVYNAKTLADGVPSRFSGSASGTQFSLKINSLQPEDFGSYYCQHFWSIPYTFGGGTKLEIK | 13.820389 | 13.240004 | 120 | 106 | 120 | 106 | 120 | 106 | 38 | fab 1h1 heavy chain | fab 1h1 light chain | mus musculus | mus musculus | D | protein | fusion glycoprotein f0 | nipah henipavirus | 32 | 16 | 0.89 | HL | train |
7upb_H_L | 7upb | prefusion-stabilized nipah virus fusion protein complexed with fab 1h1 | no | viral protein/immune system | 2022-04-14 | 2023-03-29 | electron microscopy | 3 | N.A. | N.A. | 36932063 | 10.1038/s41467-023-36995-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | H | L | VQLQQSGAELMRPGASMKISCKATGYTFSSYWIDWVKQRPGHGLEWIGEILPGSGDTNYNENFKGKAAFTADTSSNTAYMQLTSLTSEDSAVFYCARGGRYHGQGFFDYWGQGTTLTVSS | IQMTQSPASLSASVGETVTITCRPSENVHIYLAWYQQKQGKSPQLLVYNAKTLADGVPSRFSGSASGTQFSLKINSLQPEDFGSYYCQHFWSIPYTFGGGTKLEIK | VQLQQSGAELMRPGASMKISCKATGYTFSSYWIDWVKQRPGHGLEWIGEILPGSGDTNYNENFKGKAAFTADTSSNTAYMQLTSLTSEDSAVFYCARGGRYHGQGFFDYWGQGTTLTVSS | IQMTQSPASLSASVGETVTITCRPSENVHIYLAWYQQKQGKSPQLLVYNAKTLADGVPSRFSGSASGTQFSLKINSLQPEDFGSYYCQHFWSIPYTFGGGTKLEIK | 13.814901 | 13.229507 | 120 | 106 | 120 | 106 | 120 | 106 | 38 | fab 1h1 heavy chain | fab 1h1 light chain | mus musculus | mus musculus | G | protein | fusion glycoprotein f0 | nipah henipavirus | 32 | 16 | 0.89 | HL | train |
7upd_B_E | 7upd | prefusion-stabilized nipah virus fusion protein complexed with fab 2b12 | no | viral protein/immune system | 2022-04-14 | 2023-03-29 | electron microscopy | 2.4 | N.A. | N.A. | 36932063 | 10.1038/s41467-023-36995-y | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV4 | B | E | MEFGLSWIFLAAILKGVQCEVQLVESGGGLVQPKGSLKLSCAASGFIFNTYAMHWVRQAPGKGLEWVARIRSKSSNYATYYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVREGGYYFDYWGQGTTLTVSA | MEFGLSWIFLAAILKGVQCDIVMSQSPSSLAVSVGEKVTMSCKSSQSLLHVSNQKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYYSYPWPFGGGTKLEIK | EVQLVESGGGLVQPKGSLKLSCAASGFIFNTYAMHWVRQAPGKGLEWVARIRSKSSNYATYYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVREGGYYFDYWGQGTTLTVS | DIVMSQSPSSLAVSVGEKVTMSCKSSQSLLHVSNQKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYYSYPWPFGGGTKLEIK | 13.884953 | 13.956059 | 138 | 132 | 118 | 113 | 118 | 113 | 34 | fab 2b12 heavy chain | fab 2b12 light chain | mus musculus | mus musculus | A | protein | fusion glycoprotein f0 | nipah henipavirus | 50 | 20 | 0.8 | HL | train |
7upd_H_L | 7upd | prefusion-stabilized nipah virus fusion protein complexed with fab 2b12 | no | viral protein/immune system | 2022-04-14 | 2023-03-29 | electron microscopy | 2.4 | N.A. | N.A. | 36932063 | 10.1038/s41467-023-36995-y | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV4 | H | L | MEFGLSWIFLAAILKGVQCEVQLVESGGGLVQPKGSLKLSCAASGFIFNTYAMHWVRQAPGKGLEWVARIRSKSSNYATYYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVREGGYYFDYWGQGTTLTVSA | MEFGLSWIFLAAILKGVQCDIVMSQSPSSLAVSVGEKVTMSCKSSQSLLHVSNQKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYYSYPWPFGGGTKLEIK | EVQLVESGGGLVQPKGSLKLSCAASGFIFNTYAMHWVRQAPGKGLEWVARIRSKSSNYATYYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVREGGYYFDYWGQGTTLTVS | DIVMSQSPSSLAVSVGEKVTMSCKSSQSLLHVSNQKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYYSYPWPFGGGTKLEIK | 13.885987 | 13.960198 | 138 | 132 | 118 | 113 | 118 | 113 | 34 | fab 2b12 heavy chain | fab 2b12 light chain | mus musculus | mus musculus | D | protein | fusion glycoprotein f0 | nipah henipavirus | 50 | 20 | 0.8 | HL | train |
7upd_C_F | 7upd | prefusion-stabilized nipah virus fusion protein complexed with fab 2b12 | no | viral protein/immune system | 2022-04-14 | 2023-03-29 | electron microscopy | 2.4 | N.A. | N.A. | 36932063 | 10.1038/s41467-023-36995-y | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV4 | C | F | MEFGLSWIFLAAILKGVQCEVQLVESGGGLVQPKGSLKLSCAASGFIFNTYAMHWVRQAPGKGLEWVARIRSKSSNYATYYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVREGGYYFDYWGQGTTLTVSA | MEFGLSWIFLAAILKGVQCDIVMSQSPSSLAVSVGEKVTMSCKSSQSLLHVSNQKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYYSYPWPFGGGTKLEIK | EVQLVESGGGLVQPKGSLKLSCAASGFIFNTYAMHWVRQAPGKGLEWVARIRSKSSNYATYYADSVKDRFTISRDDSQSMLYLQMNNLKTEDTAMYYCVREGGYYFDYWGQGTTLTVS | DIVMSQSPSSLAVSVGEKVTMSCKSSQSLLHVSNQKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVKAEDLAVYYCQQYYSYPWPFGGGTKLEIK | 13.889051 | 13.955694 | 138 | 132 | 118 | 113 | 118 | 113 | 34 | fab 2b12 heavy chain | fab 2b12 light chain | mus musculus | mus musculus | G | protein | fusion glycoprotein f0 | nipah henipavirus | 50 | 20 | 0.8 | HL | train |
7uow_H_L | 7uow | sars-cov2 s protein structure in complex with neutralizing monoclonal antibody 034_32 | no | viral protein | 2022-04-14 | 2023-04-19 | electron microscopy | 4.4 | N.A. | N.A. | 37167972 | 10.1016/j.str.2023.04.010 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLIQPGGSLRLSCAASGITVSSNYMSWVRQAPGKGLEWVSVIYAGGSTFYADSVKGRFTISRDNSKNTLYLQMSSLRVEDTAVYYCARDLDYYGMDVWGRGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYK... | AIQLTQSPSSLSASVGDRVTITCRASQGISTYLAWYQQKPGKAPKLLIYGASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFAAYYCQQVNSYPPITFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLIQPGGSLRLSCAASGITVSSNYMSWVRQAPGKGLEWVSVIYAGGSTFYADSVKGRFTISRDNSKNTLYLQMSSLRVEDTAVYYCARDLDYYGMDVWGRGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | AIQLTQSPSSLSASVGDRVTITCRASQGISTYLAWYQQKPGKAPKLLIYGASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFAAYYCQQVNSYPPITFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.367157 | 23.226835 | 447 | 215 | 222 | 215 | 222 | 215 | 42 | monoclonal antibody 034_32 heavy chain | monoclonal antibody 034_32 light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus | 51 | 20 | 0.87 | HL | train |
7uow_J_I | 7uow | sars-cov2 s protein structure in complex with neutralizing monoclonal antibody 034_32 | no | viral protein | 2022-04-14 | 2023-04-19 | electron microscopy | 4.4 | N.A. | N.A. | 37167972 | 10.1016/j.str.2023.04.010 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | J | I | EVQLVESGGGLIQPGGSLRLSCAASGITVSSNYMSWVRQAPGKGLEWVSVIYAGGSTFYADSVKGRFTISRDNSKNTLYLQMSSLRVEDTAVYYCARDLDYYGMDVWGRGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYK... | AIQLTQSPSSLSASVGDRVTITCRASQGISTYLAWYQQKPGKAPKLLIYGASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFAAYYCQQVNSYPPITFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLIQPGGSLRLSCAASGITVSSNYMSWVRQAPGKGLEWVSVIYAGGSTFYADSVKGRFTISRDNSKNTLYLQMSSLRVEDTAVYYCARDLDYYGMDVWGRGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | AIQLTQSPSSLSASVGDRVTITCRASQGISTYLAWYQQKPGKAPKLLIYGASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFAAYYCQQVNSYPPITFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.533482 | 23.210894 | 447 | 215 | 222 | 215 | 222 | 215 | 76 | monoclonal antibody 034_32 heavy chain | monoclonal antibody 034_32 light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus | 51 | 18 | 0.75 | HL | train |
7upm_B | 7upm | tribbles (trib2) pseudokinase bound to nanobody nb4.103 | no | signaling protein/immune system | 2022-04-15 | 2022-09-14 | x-ray diffraction | 2.7 | 0.26 | 0.202 | 36108635 | 10.1016/j.str.2022.08.006 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGNISAQAYMGWYRQAPGKERELVAGISYGATTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVISAGGGESIGYHFYWGQGTQVTVSS | N.A. | QLQESGGGLVQAGGSLRLSCAASGNISAQAYMGWYRQAPGKERELVAGISYGATTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVISAGGGESIGYHFYWGQGTQVTVS | N.A. | 13.521102 | 0 | 122 | 0 | 111 | 0 | 119 | 0 | 0 | nb4.103 nanobody | N.A. | synthetic construct | N.A. | A | protein | tribbles homolog 2 | homo sapiens | 39 | 10 | 0.53 | H_only | train |
7zlg_H_L | 7zlg | cryo-em structure of c-mannosyltransferase cedpy19, in complex with acceptor peptide and bound to cmt2-fab and anti-fab nanobody | no | membrane protein | 2022-04-15 | 2023-01-11 | electron microscopy | 2.72 | N.A. | N.A. | 36604564 | 10.1038/s41589-022-01219-9 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNISSSSIHWVRQAPGKGLEWVASISSSYGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSSSVYWSWWGYSAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQGASEPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNISSSSIHWVRQAPGKGLEWVASISSSYGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSSSVYWSWWGYSAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQGASEPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 23.959068 | 22.872074 | 236 | 215 | 226 | 211 | 226 | 211 | 102 | cmt2-fab heavy chain | cmt2-fab light chain | synthetic construct | synthetic construct | A | protein | c-mannosyltransferase dpy-19 | caenorhabditis elegans | 25 | 15 | 1 | HL | train |
7zlg_K | 7zlg | cryo-em structure of c-mannosyltransferase cedpy19, in complex with acceptor peptide and bound to cmt2-fab and anti-fab nanobody | no | membrane protein | 2022-04-15 | 2023-01-11 | electron microscopy | 2.72 | N.A. | N.A. | 36604564 | 10.1038/s41589-022-01219-9 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | K | N.A. | GSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS | N.A. | 14.031643 | 0 | 123 | 0 | 120 | 0 | 120 | 0 | 0 | anti-fab nanobody | N.A. | synthetic construct | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7zlh_H_L | 7zlh | cryo-em structure of c-mannosyltransferase cedpy19, in apo state, bound to cmt2-fab and anti-fab nanobody | no | membrane protein | 2022-04-15 | 2023-01-11 | electron microscopy | 2.75 | N.A. | N.A. | 36604564 | 10.1038/s41589-022-01219-9 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNISSSSIHWVRQAPGKGLEWVASISSSYGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSSSVYWSWWGYSAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQGASEPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNISSSSIHWVRQAPGKGLEWVASISSSYGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSSSVYWSWWGYSAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQGASEPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 23.837648 | 22.793812 | 236 | 215 | 226 | 211 | 226 | 211 | 95 | cmt2-fab heavy chain | cmt2-fab light chain | synthetic construct | synthetic construct | A | protein | c-mannosyltransferase dpy-19 | caenorhabditis elegans | 29 | 16 | 1 | HL | train |
7zlh_K | 7zlh | cryo-em structure of c-mannosyltransferase cedpy19, in apo state, bound to cmt2-fab and anti-fab nanobody | no | membrane protein | 2022-04-15 | 2023-01-11 | electron microscopy | 2.75 | N.A. | N.A. | 36604564 | 10.1038/s41589-022-01219-9 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | K | N.A. | GSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS | N.A. | 13.992028 | 0 | 123 | 0 | 120 | 0 | 120 | 0 | 0 | anti-fab nanobody | N.A. | synthetic construct | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7zli_H_L | 7zli | cryo-em structure of c-mannosyltransferase cedpy19, in complex with dol25-p-man and bound to cmt2-fab and anti-fab nanobody | no | membrane protein | 2022-04-15 | 2023-01-11 | electron microscopy | 2.99 | N.A. | N.A. | 36604564 | 10.1038/s41589-022-01219-9 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNISSSSIHWVRQAPGKGLEWVASISSSYGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSSSVYWSWWGYSAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQGASEPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNISSSSIHWVRQAPGKGLEWVASISSSYGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSSSVYWSWWGYSAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQGASEPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 23.842312 | 22.743216 | 236 | 215 | 226 | 211 | 226 | 211 | 90 | cmt2-fab heavy chain | cmt2-fab light chain | synthetic construct | synthetic construct | A | protein | c-mannosyltransferase dpy-19 | caenorhabditis elegans | 29 | 16 | 0.94 | HL | train |
7zli_K | 7zli | cryo-em structure of c-mannosyltransferase cedpy19, in complex with dol25-p-man and bound to cmt2-fab and anti-fab nanobody | no | membrane protein | 2022-04-15 | 2023-01-11 | electron microscopy | 2.99 | N.A. | N.A. | 36604564 | 10.1038/s41589-022-01219-9 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | K | N.A. | GSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS | N.A. | 13.837423 | 0 | 123 | 0 | 120 | 0 | 120 | 0 | 0 | anti-fab nanobody | N.A. | synthetic construct | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7zlj_H_L | 7zlj | cryo-em structure of c-mannosyltransferase cedpy19, in ternary complex with dol25-p-c-man and acceptor peptide, bound to cmt2-fab and anti-fab nanobody | no | membrane protein | 2022-04-15 | 2023-01-11 | electron microscopy | 3.63 | N.A. | N.A. | 36604564 | 10.1038/s41589-022-01219-9 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNISSSSIHWVRQAPGKGLEWVASISSSYGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSSSVYWSWWGYSAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQGASEPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNISSSSIHWVRQAPGKGLEWVASISSSYGYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSSSVYWSWWGYSAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQGASEPITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 23.959162 | 22.737282 | 236 | 215 | 226 | 211 | 226 | 211 | 82 | cmt2-fab heavy chain | cmt2-fab light chain | synthetic construct | synthetic construct | A | protein | c-mannosyltransferase dpy-19 | caenorhabditis elegans | 24 | 15 | 1 | HL | train |
7zlj_K | 7zlj | cryo-em structure of c-mannosyltransferase cedpy19, in ternary complex with dol25-p-c-man and acceptor peptide, bound to cmt2-fab and anti-fab nanobody | no | membrane protein | 2022-04-15 | 2023-01-11 | electron microscopy | 3.63 | N.A. | N.A. | 36604564 | 10.1038/s41589-022-01219-9 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | K | N.A. | GSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS | N.A. | 13.825967 | 0 | 123 | 0 | 120 | 0 | 120 | 0 | 0 | anti-fab nanobody | N.A. | synthetic construct | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7upk_E_G | 7upk | prefusion-stabilized nipah virus fusion protein complexed with fab 1a9 | no | viral protein/immune system | 2022-04-15 | 2023-03-29 | electron microscopy | 2.8 | N.A. | N.A. | 36932063 | 10.1038/s41467-023-36995-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | E | G | QVQLQQSGAELVRPGTSVKISCKASGYTFTNYWLGWVKQRPGHGLEWIGDIYRGGGYTNYNEKFKGKATLTADTSSSTAYMQLSSLTSEDSAVYFCATRDGYFDYWGQGTTLTVSS | DIQMTQSSSSFSVSLGDRTTITCKASEDIYNRLAWFQQKPGNAPRLLISGATSLETGVPSRFSGSGSGKDYTLSITSLQTEDVATYYCQQYWSSPWTFGGGTKLEIK | QVQLQQSGAELVRPGTSVKISCKASGYTFTNYWLGWVKQRPGHGLEWIGDIYRGGGYTNYNEKFKGKATLTADTSSSTAYMQLSSLTSEDSAVYFCATRDGYFDYWGQGTTLTVSS | DIQMTQSSSSFSVSLGDRTTITCKASEDIYNRLAWFQQKPGNAPRLLISGATSLETGVPSRFSGSGSGKDYTLSITSLQTEDVATYYCQQYWSSPWTFGGGTKLEIK | 13.622334 | 13.128599 | 116 | 107 | 116 | 107 | 116 | 107 | 38 | fab 1a9 heavy chain | fab 1a9 light chain | mus musculus | mus musculus | A;B | protein;protein | fusion glycoprotein f0;fusion glycoprotein f0 | nipah henipavirus;nipah henipavirus | 18;53 | 5;19 | 0.71;0.79 | HL | train |
7upk_C_F | 7upk | prefusion-stabilized nipah virus fusion protein complexed with fab 1a9 | no | viral protein/immune system | 2022-04-15 | 2023-03-29 | electron microscopy | 2.8 | N.A. | N.A. | 36932063 | 10.1038/s41467-023-36995-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | C | F | QVQLQQSGAELVRPGTSVKISCKASGYTFTNYWLGWVKQRPGHGLEWIGDIYRGGGYTNYNEKFKGKATLTADTSSSTAYMQLSSLTSEDSAVYFCATRDGYFDYWGQGTTLTVSS | DIQMTQSSSSFSVSLGDRTTITCKASEDIYNRLAWFQQKPGNAPRLLISGATSLETGVPSRFSGSGSGKDYTLSITSLQTEDVATYYCQQYWSSPWTFGGGTKLEIK | QVQLQQSGAELVRPGTSVKISCKASGYTFTNYWLGWVKQRPGHGLEWIGDIYRGGGYTNYNEKFKGKATLTADTSSSTAYMQLSSLTSEDSAVYFCATRDGYFDYWGQGTTLTVSS | DIQMTQSSSSFSVSLGDRTTITCKASEDIYNRLAWFQQKPGNAPRLLISGATSLETGVPSRFSGSGSGKDYTLSITSLQTEDVATYYCQQYWSSPWTFGGGTKLEIK | 13.612552 | 13.137923 | 116 | 107 | 116 | 107 | 116 | 107 | 36 | fab 1a9 heavy chain | fab 1a9 light chain | mus musculus | mus musculus | A;D | protein;protein | fusion glycoprotein f0;fusion glycoprotein f0 | nipah henipavirus;nipah henipavirus | 53;18 | 20;5 | 0.8;0.71 | HL | train |
7upk_H_L | 7upk | prefusion-stabilized nipah virus fusion protein complexed with fab 1a9 | no | viral protein/immune system | 2022-04-15 | 2023-03-29 | electron microscopy | 2.8 | N.A. | N.A. | 36932063 | 10.1038/s41467-023-36995-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | H | L | QVQLQQSGAELVRPGTSVKISCKASGYTFTNYWLGWVKQRPGHGLEWIGDIYRGGGYTNYNEKFKGKATLTADTSSSTAYMQLSSLTSEDSAVYFCATRDGYFDYWGQGTTLTVSS | DIQMTQSSSSFSVSLGDRTTITCKASEDIYNRLAWFQQKPGNAPRLLISGATSLETGVPSRFSGSGSGKDYTLSITSLQTEDVATYYCQQYWSSPWTFGGGTKLEIK | QVQLQQSGAELVRPGTSVKISCKASGYTFTNYWLGWVKQRPGHGLEWIGDIYRGGGYTNYNEKFKGKATLTADTSSSTAYMQLSSLTSEDSAVYFCATRDGYFDYWGQGTTLTVSS | DIQMTQSSSSFSVSLGDRTTITCKASEDIYNRLAWFQQKPGNAPRLLISGATSLETGVPSRFSGSGSGKDYTLSITSLQTEDVATYYCQQYWSSPWTFGGGTKLEIK | 13.623964 | 13.141559 | 116 | 107 | 116 | 107 | 116 | 107 | 37 | fab 1a9 heavy chain | fab 1a9 light chain | mus musculus | mus musculus | B;D | protein;protein | fusion glycoprotein f0;fusion glycoprotein f0 | nipah henipavirus;nipah henipavirus | 18;50 | 5;19 | 0.71;0.83 | HL | train |
7xj6_E_D | 7xj6 | sars-cov-2 ba.1 spike trimer in complex with 55a8 fab and 58g6 fab in the class 1 conformation | yes | viral protein/immune system | 2022-04-15 | 2023-04-19 | electron microscopy | 3.29 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | E | D | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYSFIWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADKSTTTAYMELSSLRSEDTAVYYCARGTEYGDYDVSHDWGQGTLVTVSS | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSHTFGQGTKLEIKR | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYSFIWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADKSTTTAYMELSSLRSEDTAVYYCARGTEYGDYDVSHDWGQGTLVTVSS | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSHTFGQGTKLEIKR | 14.012718 | 13.494898 | 121 | 108 | 121 | 108 | 121 | 108 | 39 | 55a8 heavy chain | 55a8 light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 38 | 19 | 0.86 | HL | train |
7xj6_G_F | 7xj6 | sars-cov-2 ba.1 spike trimer in complex with 55a8 fab and 58g6 fab in the class 1 conformation | yes | viral protein/immune system | 2022-04-15 | 2023-04-19 | electron microscopy | 3.29 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | G | F | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYSFIWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADKSTTTAYMELSSLRSEDTAVYYCARGTEYGDYDVSHDWGQGTLVTVSS | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSHTFGQGTKLEIKR | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYSFIWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADKSTTTAYMELSSLRSEDTAVYYCARGTEYGDYDVSHDWGQGTLVTVSS | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSHTFGQGTKLEIKR | 14.014383 | 13.547819 | 121 | 108 | 121 | 108 | 121 | 108 | 36 | 55a8 heavy chain | 55a8 light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 43 | 19 | 0.83 | HL | train |
7xj6_K_J | 7xj6 | sars-cov-2 ba.1 spike trimer in complex with 55a8 fab and 58g6 fab in the class 1 conformation | yes | viral protein/immune system | 2022-04-15 | 2023-04-19 | electron microscopy | 3.29 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | K | J | QMQLVQSGPEVKKPGTSVKVSCKASGFTFSSSAVQWVRQARGQHLEWIGWIVVGSGNTNYAQKFQERVTLTRDMSTRTAYMELSSLRSEDTAVYYCAAPNCNSTTCHDGFDIWGQGTVVTVSS | EIVLTQSPGTLSLSPGERATLSCRASQSVRSSYLGWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLESEDFAVYYCQQYDNSPWTFGQGTKVE | QMQLVQSGPEVKKPGTSVKVSCKASGFTFSSSAVQWVRQARGQHLEWIGWIVVGSGNTNYAQKFQERVTLTRDMSTRTAYMELSSLRSEDTAVYYCAAPNCNSTTCHDGFDIWGQGTVVTVSS | EIVLTQSPGTLSLSPGERATLSCRASQSVRSSYLGWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLESEDFAVYYCQQYDNSPWTFGQGTKVE | 14.465534 | 13.291248 | 123 | 106 | 123 | 106 | 123 | 106 | 41 | 58g6 heavy chain | 58g6 light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 39 | 18 | 0.82 | HL | train |
7xj6_I_H | 7xj6 | sars-cov-2 ba.1 spike trimer in complex with 55a8 fab and 58g6 fab in the class 1 conformation | yes | viral protein/immune system | 2022-04-15 | 2023-04-19 | electron microscopy | 3.29 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | I | H | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYSFIWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADKSTTTAYMELSSLRSEDTAVYYCARGTEYGDYDVSHDWGQGTLVTVSS | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSHTFGQGTKLEIKR | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYSFIWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADKSTTTAYMELSSLRSEDTAVYYCARGTEYGDYDVSHDWGQGTLVTVSS | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSHTFGQGTKLEIKR | 14.083343 | 13.529457 | 121 | 108 | 121 | 108 | 121 | 108 | 38 | 55a8 heavy chain | 55a8 light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 44 | 21 | 0.84 | HL | train |
7xj8_G_F | 7xj8 | sars-cov-2 ba.1 spike trimer in complex with 55a8 fab and 58g6 fab in the class 2 conformation | yes | viral protein/immune system | 2022-04-15 | 2023-04-19 | electron microscopy | 3.3 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | G | F | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYSFIWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADKSTTTAYMELSSLRSEDTAVYYCARGTEYGDYDVSHDWGQGTLVTVSS | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSHTFGQGTKLEIKR | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYSFIWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADKSTTTAYMELSSLRSEDTAVYYCARGTEYGDYDVSHDWGQGTLVTVSS | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSHTFGQGTKLEIKR | 14.020797 | 13.571351 | 121 | 108 | 121 | 108 | 121 | 108 | 42 | 55a8 heavy chain | 55a8 light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 44 | 20 | 0.83 | HL | train |
7xj8_K_J | 7xj8 | sars-cov-2 ba.1 spike trimer in complex with 55a8 fab and 58g6 fab in the class 2 conformation | yes | viral protein/immune system | 2022-04-15 | 2023-04-19 | electron microscopy | 3.3 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | K | J | QMQLVQSGPEVKKPGTSVKVSCKASGFTFSSSAVQWVRQARGQHLEWIGWIVVGSGNTNYAQKFQERVTLTRDMSTRTAYMELSSLRSEDTAVYYCAAPNCNSTTCHDGFDIWGQGTVVTVSS | EIVLTQSPGTLSLSPGERATLSCRASQSVRSSYLGWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLESEDFAVYYCQQYDNSPWTFGQGTKVEIKR | QMQLVQSGPEVKKPGTSVKVSCKASGFTFSSSAVQWVRQARGQHLEWIGWIVVGSGNTNYAQKFQERVTLTRDMSTRTAYMELSSLRSEDTAVYYCAAPNCNSTTCHDGFDIWGQGTVVTVSS | EIVLTQSPGTLSLSPGERATLSCRASQSVRSSYLGWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLESEDFAVYYCQQYDNSPWTFGQGTKVE | 14.499733 | 13.28301 | 123 | 109 | 123 | 106 | 123 | 106 | 40 | 58g6 heavy chain | 58g6 light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 41 | 19 | 0.79 | HL | train |
7xj8_I_H | 7xj8 | sars-cov-2 ba.1 spike trimer in complex with 55a8 fab and 58g6 fab in the class 2 conformation | yes | viral protein/immune system | 2022-04-15 | 2023-04-19 | electron microscopy | 3.3 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | I | H | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYSFIWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADKSTTTAYMELSSLRSEDTAVYYCARGTEYGDYDVSHDWGQGTLVTVSS | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSHTFGQGTKLEIKR | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYSFIWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADKSTTTAYMELSSLRSEDTAVYYCARGTEYGDYDVSHDWGQGTLVTVSS | DIQMTQSPSTLSASVGDRVTITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSYSHTFGQGTKLEIKR | 14.076798 | 13.539307 | 121 | 108 | 121 | 108 | 121 | 108 | 39 | 55a8 heavy chain | 55a8 light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 47 | 21 | 0.81 | HL | train |
7xjh_N | 7xjh | isoproterenol-activated dog beta3 adrenergic receptor | yes | membrane protein | 2022-04-18 | 2022-05-04 | electron microscopy | 3.3 | N.A. | N.A. | 34314699 | 10.1016/j.molcel.2021.06.024 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MGQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSLHHHHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.877915 | 0 | 137 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody-35 | N.A. | unidentified | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;rattus norvegicus | 46;30 | 13;11 | 0.57;0.73 | H_only | train |
7xji_N | 7xji | solabegron-activated dog beta3 adrenergic receptor | yes | membrane protein | 2022-04-18 | 2022-05-04 | electron microscopy | 3.9 | N.A. | N.A. | 35489202 | 10.1016/j.bbrc.2022.04.065 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MGQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSLHHHHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.943438 | 0 | 137 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody-35 | N.A. | unidentified | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;rattus norvegicus | 45;31 | 11;10 | 0.55;0.67 | H_only | train |
7xjl_E | 7xjl | cryo-em structure of the spexin-bound galr2-minigq complex | yes | signaling protein | 2022-04-18 | 2022-06-29 | electron microscopy | 3.5 | N.A. | N.A. | 35594396 | 10.1073/pnas.2121465119 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | GRPDVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAGAPLEVLFQGPGAWSHPQFEKGAEDQVDPRLIDGKGAAHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.435026 | 0 | 300 | 0 | 230 | 0 | 246 | 0 | 0 | single-chain variable fragment (scfv16) | N.A. | homo sapiens | N.A. | B;C | protein;protein | guanine nucleotide-binding protein g(q) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 32;22 | 18;9 | 0.86;0.9 | H_only | train |
7upw_D_E | 7upw | three rbd-down state of sars-cov-2 d614g spike in complex with the sp1-77 neutralizing antibody fab fragment | yes | viral protein | 2022-04-18 | 2022-08-10 | electron microscopy | 2.7 | N.A. | N.A. | 35951767 | 10.1126/sciimmunol.add5446 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | D | E | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGTYIHWVRQAPGQGLEWMGWINPNSGGTNFAQIFQGRVTLTRDTSISTAYMDLNRLKSDDTAVYYCARDRVLYGRSFGWYFDVWGAGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPPCPSCPAPEFLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSQEDPEVQFNWYVDGVEVHNAKTKPREEQFNSTYRVVSVLTVLHQDWLNG... | DIQMTQSPSSLSASVGDRVTITCQASQDISDYLNWYQQQPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIGTYYCQQYDNLPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGTYIHWVRQAPGQGLEWMGWINPNSGGTNFAQIFQGRVTLTRDTSISTAYMDLNRLKSDDTAVYYCARDRVLYGRSFGWYFDVWGAGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESK | DIQMTQSPSSLSASVGDRVTITCQASQDISDYLNWYQQQPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIGTYYCQQYDNLPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.991955 | 23.089472 | 451 | 213 | 225 | 212 | 225 | 212 | 112 | sp1-77 fab heavy chain | sp1-77 fab light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus | 29 | 14 | 1 | HL | train |
7upw_F_G | 7upw | three rbd-down state of sars-cov-2 d614g spike in complex with the sp1-77 neutralizing antibody fab fragment | yes | viral protein | 2022-04-18 | 2022-08-10 | electron microscopy | 2.7 | N.A. | N.A. | 35951767 | 10.1126/sciimmunol.add5446 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | F | G | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGTYIHWVRQAPGQGLEWMGWINPNSGGTNFAQIFQGRVTLTRDTSISTAYMDLNRLKSDDTAVYYCARDRVLYGRSFGWYFDVWGAGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPPCPSCPAPEFLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSQEDPEVQFNWYVDGVEVHNAKTKPREEQFNSTYRVVSVLTVLHQDWLNG... | DIQMTQSPSSLSASVGDRVTITCQASQDISDYLNWYQQQPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIGTYYCQQYDNLPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGTYIHWVRQAPGQGLEWMGWINPNSGGTNFAQIFQGRVTLTRDTSISTAYMDLNRLKSDDTAVYYCARDRVLYGRSFGWYFDVWGAGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESK | DIQMTQSPSSLSASVGDRVTITCQASQDISDYLNWYQQQPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIGTYYCQQYDNLPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.030045 | 23.111305 | 451 | 213 | 225 | 212 | 225 | 212 | 105 | sp1-77 fab heavy chain | sp1-77 fab light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus | 36 | 17 | 0.89 | HL | train |
7upw_H_L | 7upw | three rbd-down state of sars-cov-2 d614g spike in complex with the sp1-77 neutralizing antibody fab fragment | yes | viral protein | 2022-04-18 | 2022-08-10 | electron microscopy | 2.7 | N.A. | N.A. | 35951767 | 10.1126/sciimmunol.add5446 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGTYIHWVRQAPGQGLEWMGWINPNSGGTNFAQIFQGRVTLTRDTSISTAYMDLNRLKSDDTAVYYCARDRVLYGRSFGWYFDVWGAGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPPCPSCPAPEFLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSQEDPEVQFNWYVDGVEVHNAKTKPREEQFNSTYRVVSVLTVLHQDWLNG... | DIQMTQSPSSLSASVGDRVTITCQASQDISDYLNWYQQQPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIGTYYCQQYDNLPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGTYIHWVRQAPGQGLEWMGWINPNSGGTNFAQIFQGRVTLTRDTSISTAYMDLNRLKSDDTAVYYCARDRVLYGRSFGWYFDVWGAGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESK | DIQMTQSPSSLSASVGDRVTITCQASQDISDYLNWYQQQPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIGTYYCQQYDNLPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.039415 | 23.085333 | 451 | 213 | 225 | 212 | 225 | 212 | 105 | sp1-77 fab heavy chain | sp1-77 fab light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus | 31 | 15 | 1 | HL | train |
7upx_H_L | 7upx | three rbd-down state of sars-cov-2 d614g spike in complex with the sp1-77 neutralizing antibody fab fragment (local refinement of the rbd and fab variable domains) | yes | viral protein | 2022-04-18 | 2022-08-10 | electron microscopy | 3.2 | N.A. | N.A. | 35951767 | 10.1126/sciimmunol.add5446 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGTYIHWVRQAPGQGLEWMGWINPNSGGTNFAQIFQGRVTLTRDTSISTAYMDLNRLKSDDTAVYYCARDRVLYGRSFGWYFDVWGAGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPPCPSCPAPEFLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSQEDPEVQFNWYVDGVEVHNAKTKPREEQFNSTYRVVSVLTVLHQDWLNG... | DIQMTQSPSSLSASVGDRVTITCQASQDISDYLNWYQQQPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIGTYYCQQYDNLPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGTYIHWVRQAPGQGLEWMGWINPNSGGTNFAQIFQGRVTLTRDTSISTAYMDLNRLKSDDTAVYYCARDRVLYGRSFGWYFDVWGAGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESK | DIQMTQSPSSLSASVGDRVTITCQASQDISDYLNWYQQQPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIGTYYCQQYDNLPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.01395 | 22.979605 | 451 | 213 | 225 | 212 | 225 | 212 | 103 | sp1-77 fab heavy chain | sp1-77 fab light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus | 28 | 12 | 1 | HL | train |
7upy_F_G | 7upy | an antibody from single human vh-rearranging mouse neutralizes all sars-cov-2 variants through ba.5 by inhibiting membrane fusion | yes | viral protein | 2022-04-18 | 2022-08-10 | electron microscopy | 3.1 | N.A. | N.A. | 35951767 | 10.1126/sciimmunol.add5446 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | F | G | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGTYIHWVRQAPGQGLEWMGWINPNSGGTNFAQIFQGRVTLTRDTSISTAYMDLNRLKSDDTAVYYCARDRVLYGRSFGWYFDVWGAGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPPCPSCPAPEFLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSQEDPEVQFNWYVDGVEVHNAKTKPREEQFNSTYRVVSVLTVLHQDWLNG... | DIQMTQSPSSLSASVGDRVTITCQASQDISDYLNWYQQQPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIGTYYCQQYDNLPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGTYIHWVRQAPGQGLEWMGWINPNSGGTNFAQIFQGRVTLTRDTSISTAYMDLNRLKSDDTAVYYCARDRVLYGRSFGWYFDVWGAGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESK | DIQMTQSPSSLSASVGDRVTITCQASQDISDYLNWYQQQPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIGTYYCQQYDNLPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.013948 | 22.979599 | 451 | 213 | 225 | 212 | 225 | 212 | 103 | sp1-77 fab heavy chain | sp1-77 fab light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus | 28 | 13 | 1 | HL | train |
7upy_H_L | 7upy | an antibody from single human vh-rearranging mouse neutralizes all sars-cov-2 variants through ba.5 by inhibiting membrane fusion | yes | viral protein | 2022-04-18 | 2022-08-10 | electron microscopy | 3.1 | N.A. | N.A. | 35951767 | 10.1126/sciimmunol.add5446 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGTYIHWVRQAPGQGLEWMGWINPNSGGTNFAQIFQGRVTLTRDTSISTAYMDLNRLKSDDTAVYYCARDRVLYGRSFGWYFDVWGAGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPPCPSCPAPEFLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSQEDPEVQFNWYVDGVEVHNAKTKPREEQFNSTYRVVSVLTVLHQDWLNG... | DIQMTQSPSSLSASVGDRVTITCQASQDISDYLNWYQQQPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIGTYYCQQYDNLPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGTYIHWVRQAPGQGLEWMGWINPNSGGTNFAQIFQGRVTLTRDTSISTAYMDLNRLKSDDTAVYYCARDRVLYGRSFGWYFDVWGAGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESK | DIQMTQSPSSLSASVGDRVTITCQASQDISDYLNWYQQQPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIGTYYCQQYDNLPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.013948 | 22.979607 | 451 | 213 | 225 | 212 | 225 | 212 | 103 | sp1-77 fab heavy chain | sp1-77 fab light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus | 30 | 13 | 1 | HL | train |
7upy_D_E | 7upy | an antibody from single human vh-rearranging mouse neutralizes all sars-cov-2 variants through ba.5 by inhibiting membrane fusion | yes | viral protein | 2022-04-18 | 2022-08-10 | electron microscopy | 3.1 | N.A. | N.A. | 35951767 | 10.1126/sciimmunol.add5446 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | D | E | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGTYIHWVRQAPGQGLEWMGWINPNSGGTNFAQIFQGRVTLTRDTSISTAYMDLNRLKSDDTAVYYCARDRVLYGRSFGWYFDVWGAGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPPCPSCPAPEFLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSQEDPEVQFNWYVDGVEVHNAKTKPREEQFNSTYRVVSVLTVLHQDWLNG... | DIQMTQSPSSLSASVGDRVTITCQASQDISDYLNWYQQQPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIGTYYCQQYDNLPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKVSCKASGYTFTGTYIHWVRQAPGQGLEWMGWINPNSGGTNFAQIFQGRVTLTRDTSISTAYMDLNRLKSDDTAVYYCARDRVLYGRSFGWYFDVWGAGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESK | DIQMTQSPSSLSASVGDRVTITCQASQDISDYLNWYQQQPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIGTYYCQQYDNLPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.013653 | 22.979609 | 451 | 213 | 225 | 212 | 225 | 212 | 104 | sp1-77 fab heavy chain | sp1-77 fab light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus | 34 | 15 | 0.88 | HL | train |
7xjj_S | 7xjj | cryo-em structure of the galanin-bound galr1-minigo complex | yes | signaling protein | 2022-04-18 | 2023-05-03 | electron microscopy | 3.3 | N.A. | N.A. | 35594396 | 10.1073/pnas.2121465119 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | PDVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAGAPLEVLFQGPGAWSHPQFEKGAEDQVDPRLIDGKGAAHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.27245 | 0 | 298 | 0 | 231 | 0 | 246 | 0 | 0 | single fab chain (svfv16) | N.A. | homo sapiens | N.A. | A;B | protein;protein | g protein subunit alpha o1,guanine nucleotide-binding protein g(o) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 32;23 | 20;10 | 0.91;0.83 | H_only | train |
7zml_F | 7zml | crystal structure of human recql5 helicase apo form in complex with engineered nanobody (gluebody) g1-001 | no | hydrolase | 2022-04-19 | 2022-06-22 | x-ray diffraction | 2.79 | 0.261 | 0.224 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSINRMGWYRQAPGKQRELVAAITSGGSTNYAYSVKGRFTISRDNAKNTVYLQMNSLKPEDTAIYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVSAAENLYFQ | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSINRMGWYRQAPGKQRELVAAITSGGSTNYAYSVKGRFTISRDNAKNTVYLQMNSLKPEDTAIYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVSAAENLY | N.A. | 15.65684 | 0 | 132 | 0 | 130 | 0 | 130 | 0 | 0 | gluebody g1-001 | N.A. | lama glama | N.A. | A | protein | atp-dependent dna helicase q5 | homo sapiens | 38 | 16 | 1 | H_only | train |
7zml_E | 7zml | crystal structure of human recql5 helicase apo form in complex with engineered nanobody (gluebody) g1-001 | no | hydrolase | 2022-04-19 | 2022-06-22 | x-ray diffraction | 2.79 | 0.261 | 0.224 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSINRMGWYRQAPGKQRELVAAITSGGSTNYAYSVKGRFTISRDNAKNTVYLQMNSLKPEDTAIYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVSAAENLYFQ | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSINRMGWYRQAPGKQRELVAAITSGGSTNYAYSVKGRFTISRDNAKNTVYLQMNSLKPEDTAIYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVSAAEN | N.A. | 15.309671 | 0 | 132 | 0 | 128 | 0 | 128 | 0 | 0 | gluebody g1-001 | N.A. | lama glama | N.A. | B | protein | atp-dependent dna helicase q5 | homo sapiens | 37 | 17 | 1 | H_only | train |
7zml_K | 7zml | crystal structure of human recql5 helicase apo form in complex with engineered nanobody (gluebody) g1-001 | no | hydrolase | 2022-04-19 | 2022-06-22 | x-ray diffraction | 2.79 | 0.261 | 0.224 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | K | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSINRMGWYRQAPGKQRELVAAITSGGSTNYAYSVKGRFTISRDNAKNTVYLQMNSLKPEDTAIYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVSAAENLYFQ | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSINRMGWYRQAPGKQRELVAAITSGGSTNYAYSVKGRFTISRDNAKNTVYLQMNSLKPEDTAIYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVSAAENLYF | N.A. | 15.776601 | 0 | 132 | 0 | 131 | 0 | 131 | 0 | 0 | gluebody g1-001 | N.A. | lama glama | N.A. | C | protein | atp-dependent dna helicase q5 | homo sapiens | 39 | 17 | 1 | H_only | train |
7zml_G | 7zml | crystal structure of human recql5 helicase apo form in complex with engineered nanobody (gluebody) g1-001 | no | hydrolase | 2022-04-19 | 2022-06-22 | x-ray diffraction | 2.79 | 0.261 | 0.224 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | G | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSINRMGWYRQAPGKQRELVAAITSGGSTNYAYSVKGRFTISRDNAKNTVYLQMNSLKPEDTAIYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVSAAENLYFQ | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSINRMGWYRQAPGKQRELVAAITSGGSTNYAYSVKGRFTISRDNAKNTVYLQMNSLKPEDTAIYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVSAAENLYF | N.A. | 15.795745 | 0 | 132 | 0 | 131 | 0 | 131 | 0 | 0 | gluebody g1-001 | N.A. | lama glama | N.A. | D | protein | atp-dependent dna helicase q5 | homo sapiens | 38 | 17 | 1 | H_only | train |
7zmn_C | 7zmn | crystal structure of human recql5 helicase apo form in complex with engineered nanobody (gluebody) g3-048 | no | hydrolase | 2022-04-19 | 2022-06-22 | x-ray diffraction | 3.2 | 0.275 | 0.242 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | SMAQVQLVENGGGCVQATGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDSAKGTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVS | N.A. | QVQLVENGGGCVQATGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDSAKGTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVS | N.A. | 14.66685 | 0 | 127 | 0 | 124 | 0 | 124 | 0 | 0 | gluebody g3-048 | N.A. | lama glama | N.A. | A | protein | atp-dependent dna helicase q5 | homo sapiens | 38 | 18 | 1 | H_only | train |
7zmn_K | 7zmn | crystal structure of human recql5 helicase apo form in complex with engineered nanobody (gluebody) g3-048 | no | hydrolase | 2022-04-19 | 2022-06-22 | x-ray diffraction | 3.2 | 0.275 | 0.242 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | K | N.A. | SMAQVQLVENGGGCVQATGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDSAKGTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVS | N.A. | QVQLVENGGGCVQATGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDSAKGTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVS | N.A. | 14.640466 | 0 | 127 | 0 | 124 | 0 | 124 | 0 | 0 | gluebody g3-048 | N.A. | lama glama | N.A. | B | protein | atp-dependent dna helicase q5 | homo sapiens | 38 | 17 | 1 | H_only | train |
7zmo_K | 7zmo | crystal structure of human recql5 helicase apo form in complex with engineered nanobody (gluebody) g3-052 | no | hydrolase | 2022-04-19 | 2022-06-22 | x-ray diffraction | 3.75 | 0.306 | 0.283 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | K | N.A. | SMAQVQLVENGGGCVQAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDSAKGTVYLYMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVS | N.A. | QVQLVENGGGCVQAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDSAKGTVYLYMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVS | N.A. | 14.777279 | 0 | 127 | 0 | 124 | 0 | 124 | 0 | 0 | gluebody g3-052 | N.A. | lama glama | N.A. | A | protein | atp-dependent dna helicase q5 | homo sapiens | 37 | 16 | 1 | H_only | train |
7zmo_C | 7zmo | crystal structure of human recql5 helicase apo form in complex with engineered nanobody (gluebody) g3-052 | no | hydrolase | 2022-04-19 | 2022-06-22 | x-ray diffraction | 3.75 | 0.306 | 0.283 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | SMAQVQLVENGGGCVQAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDSAKGTVYLYMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVS | N.A. | QVQLVENGGGCVQAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDSAKGTVYLYMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVS | N.A. | 14.799651 | 0 | 127 | 0 | 124 | 0 | 124 | 0 | 0 | gluebody g3-052 | N.A. | lama glama | N.A. | B | protein | atp-dependent dna helicase q5 | homo sapiens | 37 | 16 | 1 | H_only | train |
7zmp_C | 7zmp | crystal structure of human recql5 helicase apo form in complex with engineered nanobody (gluebody) g3-055 | no | hydrolase | 2022-04-19 | 2022-06-22 | x-ray diffraction | 3.63 | 0.359 | 0.332 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | SMAQVQLVENGGGNVQAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDSAKGTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVS | N.A. | QVQLVENGGGNVQAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDSAKGTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVS | N.A. | 14.766137 | 0 | 127 | 0 | 124 | 0 | 124 | 0 | 0 | gluebody g3-055 | N.A. | lama glama | N.A. | A | protein | atp-dependent dna helicase q5 | homo sapiens | 39 | 16 | 1 | H_only | train |
7zmp_K | 7zmp | crystal structure of human recql5 helicase apo form in complex with engineered nanobody (gluebody) g3-055 | no | hydrolase | 2022-04-19 | 2022-06-22 | x-ray diffraction | 3.63 | 0.359 | 0.332 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | K | N.A. | SMAQVQLVENGGGNVQAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDSAKGTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVS | N.A. | QVQLVENGGGNVQAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDSAKGTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVS | N.A. | 14.779835 | 0 | 127 | 0 | 124 | 0 | 124 | 0 | 0 | gluebody g3-055 | N.A. | lama glama | N.A. | B | protein | atp-dependent dna helicase q5 | homo sapiens | 37 | 17 | 1 | H_only | train |
7zmq_K | 7zmq | crystal structure of human recql5 helicase apo form in complex with engineered nanobody (gluebody) g2*-006 | no | hydrolase | 2022-04-19 | 2022-06-22 | x-ray diffraction | 2.7 | 0.258 | 0.225 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | K | N.A. | SMAQVQLVENGGGNVQAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYAYSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVS | N.A. | QVQLVENGGGNVQAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYAYSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVS | N.A. | 14.735999 | 0 | 127 | 0 | 124 | 0 | 124 | 0 | 0 | gluebody g2*-006 | N.A. | lama glama | N.A. | A | protein | atp-dependent dna helicase q5 | homo sapiens | 40 | 18 | 1 | H_only | train |
7zmq_C | 7zmq | crystal structure of human recql5 helicase apo form in complex with engineered nanobody (gluebody) g2*-006 | no | hydrolase | 2022-04-19 | 2022-06-22 | x-ray diffraction | 2.7 | 0.258 | 0.225 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | SMAQVQLVENGGGNVQAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYAYSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVS | N.A. | QVQLVENGGGNVQAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYAYSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVS | N.A. | 14.729127 | 0 | 127 | 0 | 124 | 0 | 124 | 0 | 0 | gluebody g2*-006 | N.A. | lama glama | N.A. | B | protein | atp-dependent dna helicase q5 | homo sapiens | 39 | 18 | 1 | H_only | train |
7zmr_K | 7zmr | crystal structure of human recql5 helicase apo form in complex with engineered nanobody (gluebody) g2*-011 | no | hydrolase | 2022-04-19 | 2022-06-22 | x-ray diffraction | 3.3 | 0.292 | 0.243 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | K | N.A. | SMAQVQLVENGGGCVQAGGSLKLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYAYSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVS | N.A. | QVQLVENGGGCVQAGGSLKLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYAYSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVS | N.A. | 14.742113 | 0 | 127 | 0 | 124 | 0 | 124 | 0 | 0 | gluebody g2*-011 | N.A. | lama glama | N.A. | A | protein | atp-dependent dna helicase q5 | homo sapiens | 39 | 17 | 1 | H_only | train |
7zmr_C | 7zmr | crystal structure of human recql5 helicase apo form in complex with engineered nanobody (gluebody) g2*-011 | no | hydrolase | 2022-04-19 | 2022-06-22 | x-ray diffraction | 3.3 | 0.292 | 0.243 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | SMAQVQLVENGGGCVQAGGSLKLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYAYSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVS | N.A. | QVQLVENGGGCVQAGGSLKLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYAYSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVTVS | N.A. | 14.746856 | 0 | 127 | 0 | 124 | 0 | 124 | 0 | 0 | gluebody g2*-011 | N.A. | lama glama | N.A. | B | protein | atp-dependent dna helicase q5 | homo sapiens | 38 | 17 | 1 | H_only | train |
7zmt_C | 7zmt | crystal structure of human recql5 helicase apo form in complex with engineered nanobody (gluebody) g5-006 | no | hydrolase | 2022-04-19 | 2022-06-22 | x-ray diffraction | 2.3 | 0.291 | 0.264 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | SMAQVQLVENGGGCVKAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDNAENTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVMVS | N.A. | QVQLVENGGGCVKAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDNAENTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVMVS | N.A. | 14.770323 | 0 | 127 | 0 | 124 | 0 | 124 | 0 | 0 | gluebody g5-006 | N.A. | lama glama | N.A. | A | protein | atp-dependent dna helicase q5 | homo sapiens | 39 | 18 | 1 | H_only | train |
7zmt_K | 7zmt | crystal structure of human recql5 helicase apo form in complex with engineered nanobody (gluebody) g5-006 | no | hydrolase | 2022-04-19 | 2022-06-22 | x-ray diffraction | 2.3 | 0.291 | 0.264 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | K | N.A. | SMAQVQLVENGGGCVKAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDNAENTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVMVS | N.A. | QVQLVENGGGCVKAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDNAENTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVMVS | N.A. | 14.756579 | 0 | 127 | 0 | 124 | 0 | 124 | 0 | 0 | gluebody g5-006 | N.A. | lama glama | N.A. | B | protein | atp-dependent dna helicase q5 | homo sapiens | 38 | 16 | 0.94 | H_only | train |
7zmv_G | 7zmv | crystal structure of human recql5 helicase apo form in complex with engineered nanobody (gluebody) g5-006 | no | hydrolase | 2022-04-19 | 2022-06-22 | x-ray diffraction | 2 | 0.275 | 0.243 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | G | N.A. | SMAQVQLVENGGGCVKAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDNAENTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVMVS | N.A. | QVQLVENGGGCVKAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDNAENTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVMVS | N.A. | 14.690138 | 0 | 127 | 0 | 124 | 0 | 124 | 0 | 0 | gluebody g5-006 | N.A. | lama glama | N.A. | A | protein | atp-dependent dna helicase q5 | homo sapiens | 37 | 17 | 1 | H_only | train |
7zmv_F | 7zmv | crystal structure of human recql5 helicase apo form in complex with engineered nanobody (gluebody) g5-006 | no | hydrolase | 2022-04-19 | 2022-06-22 | x-ray diffraction | 2 | 0.275 | 0.243 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | SMAQVQLVENGGGCVKAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDNAENTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVMVS | N.A. | QVQLVENGGGCVKAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDNAENTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVMVS | N.A. | 14.658569 | 0 | 127 | 0 | 124 | 0 | 124 | 0 | 0 | gluebody g5-006 | N.A. | lama glama | N.A. | B | protein | atp-dependent dna helicase q5 | homo sapiens | 38 | 17 | 1 | H_only | train |
7zmv_K | 7zmv | crystal structure of human recql5 helicase apo form in complex with engineered nanobody (gluebody) g5-006 | no | hydrolase | 2022-04-19 | 2022-06-22 | x-ray diffraction | 2 | 0.275 | 0.243 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | K | N.A. | SMAQVQLVENGGGCVKAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDNAENTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVMVS | N.A. | QVQLVENGGGCVKAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDNAENTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVMVS | N.A. | 14.665351 | 0 | 127 | 0 | 124 | 0 | 124 | 0 | 0 | gluebody g5-006 | N.A. | lama glama | N.A. | C | protein | atp-dependent dna helicase q5 | homo sapiens | 38 | 17 | 1 | H_only | train |
7zmv_E | 7zmv | crystal structure of human recql5 helicase apo form in complex with engineered nanobody (gluebody) g5-006 | no | hydrolase | 2022-04-19 | 2022-06-22 | x-ray diffraction | 2 | 0.275 | 0.243 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | SMAQVQLVENGGGCVKAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDNAENTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVMVS | N.A. | QVQLVENGGGCVKAGGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDNAENTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVMVS | N.A. | 14.659379 | 0 | 127 | 0 | 124 | 0 | 124 | 0 | 0 | gluebody g5-006 | N.A. | lama glama | N.A. | D | protein | atp-dependent dna helicase q5 | homo sapiens | 39 | 18 | 1 | H_only | train |
7zms_K | 7zms | crystal structure of human recql5 helicase apo form in complex with engineered nanobody (gluebody) g4-043 | no | hydrolase | 2022-04-19 | 2022-07-13 | x-ray diffraction | 2.7 | 0.276 | 0.235 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | K | N.A. | SMAQVQLVENGGGCVQATGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDSAKGTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVMVS | N.A. | QVQLVENGGGCVQATGSLRLSCAASGSIFSINRMTWYRQAPGKEREWVAAITSGGSTNYADSVKGRFTISRDSAKGTVYLQMNSLKPEDTAVYYCEAYGTYTLAPTGEGEYDDYWGQGTQVMVS | N.A. | 14.784993 | 0 | 127 | 0 | 124 | 0 | 124 | 0 | 0 | gluebody g4-043 | N.A. | lama glama | N.A. | A | protein | atp-dependent dna helicase q5 | homo sapiens | 35 | 15 | 1 | H_only | train |
7xkd_N | 7xkd | cryo-em structure of dhea-adgrg2-bt-gs complex | yes | membrane protein | 2022-04-19 | 2022-08-10 | electron microscopy | 2.4 | N.A. | N.A. | 35982227 | 10.1038/s41589-022-01084-6 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.808616 | 0 | 128 | 0 | 128 | 0 | 128 | 0 | 0 | nb35 | N.A. | camelus bactrianus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 50;32 | 17;12 | 0.63;0.71 | H_only | train |
7xke_N | 7xke | cryo-em structure of dhea-adgrg2-fl-gs complex | yes | membrane protein | 2022-04-19 | 2022-08-10 | electron microscopy | 2.9 | N.A. | N.A. | 35982227 | 10.1038/s41589-022-01084-6 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVS | N.A. | 13.658755 | 0 | 128 | 0 | 127 | 0 | 127 | 0 | 0 | nb35 | N.A. | camelus bactrianus | N.A. | A;B | protein;protein | mini-gs;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 49;32 | 15;11 | 0.62;0.69 | H_only | train |
7xkf_N | 7xkf | cryo-em structure of dhea-adgrg2-bt-gs complex at lower state | yes | membrane protein | 2022-04-19 | 2022-08-10 | electron microscopy | 2.4 | N.A. | N.A. | 35982227 | 10.1038/s41589-022-01084-6 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.808616 | 0 | 128 | 0 | 128 | 0 | 128 | 0 | 0 | nb35 | N.A. | camelus bactrianus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 50;32 | 17;12 | 0.63;0.71 | H_only | train |
7zmk_E_F | 7zmk | structure of human mfap4 in complex with the fab fragment of the as0326 monoclonal antibody | no | cell adhesion | 2022-04-19 | 2023-03-01 | x-ray diffraction | 3.4 | 0.277 | 0.239 | 39863929 | 10.1016/j.ymthe.2025.01.038 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | E | F | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSYWMHWVRQARGQRLEWIGVIHPNSGNTKYNEKFRSRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAREMWNYGNSWYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRASKSISKYLAWYQQKPGKAPELLIYSGSTLQSGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQHNEYPFTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSYWMHWVRQARGQRLEWIGVIHPNSGNTKYNEKFRSRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAREMWNYGNSWYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRASKSISKYLAWYQQKPGKAPELLIYSGSTLQSGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQHNEYPFTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.786297 | 22.828405 | 222 | 214 | 222 | 214 | 222 | 214 | 99 | heavy chain of antibody as0326 | light chain of as0326 | mus musculus | mus musculus | A | protein | microfibril-associated glycoprotein 4 | homo sapiens | 35 | 16 | 0.89 | HL | train |
7zmk_B_C | 7zmk | structure of human mfap4 in complex with the fab fragment of the as0326 monoclonal antibody | no | cell adhesion | 2022-04-19 | 2023-03-01 | x-ray diffraction | 3.4 | 0.277 | 0.239 | 39863929 | 10.1016/j.ymthe.2025.01.038 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | B | C | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSYWMHWVRQARGQRLEWIGVIHPNSGNTKYNEKFRSRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAREMWNYGNSWYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRASKSISKYLAWYQQKPGKAPELLIYSGSTLQSGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQHNEYPFTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSYWMHWVRQARGQRLEWIGVIHPNSGNTKYNEKFRSRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAREMWNYGNSWYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRASKSISKYLAWYQQKPGKAPELLIYSGSTLQSGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQHNEYPFTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.801052 | 22.774895 | 222 | 214 | 222 | 214 | 222 | 214 | 102 | heavy chain of antibody as0326 | light chain of as0326 | mus musculus | mus musculus | D | protein | microfibril-associated glycoprotein 4 | homo sapiens | 32 | 15 | 0.88 | HL | train |
7zmk_G_H | 7zmk | structure of human mfap4 in complex with the fab fragment of the as0326 monoclonal antibody | no | cell adhesion | 2022-04-19 | 2023-03-01 | x-ray diffraction | 3.4 | 0.277 | 0.239 | 39863929 | 10.1016/j.ymthe.2025.01.038 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | G | H | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSYWMHWVRQARGQRLEWIGVIHPNSGNTKYNEKFRSRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAREMWNYGNSWYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRASKSISKYLAWYQQKPGKAPELLIYSGSTLQSGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQHNEYPFTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSYWMHWVRQARGQRLEWIGVIHPNSGNTKYNEKFRSRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAREMWNYGNSWYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRASKSISKYLAWYQQKPGKAPELLIYSGSTLQSGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQHNEYPFTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.870228 | 22.855913 | 222 | 214 | 222 | 214 | 222 | 214 | 101 | heavy chain of antibody as0326 | light chain of as0326 | mus musculus | mus musculus | I | protein | microfibril-associated glycoprotein 4 | homo sapiens | 34 | 15 | 0.88 | HL | train |
7zmk_J_K | 7zmk | structure of human mfap4 in complex with the fab fragment of the as0326 monoclonal antibody | no | cell adhesion | 2022-04-19 | 2023-03-01 | x-ray diffraction | 3.4 | 0.277 | 0.239 | 39863929 | 10.1016/j.ymthe.2025.01.038 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | J | K | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSYWMHWVRQARGQRLEWIGVIHPNSGNTKYNEKFRSRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAREMWNYGNSWYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRASKSISKYLAWYQQKPGKAPELLIYSGSTLQSGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQHNEYPFTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSYWMHWVRQARGQRLEWIGVIHPNSGNTKYNEKFRSRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAREMWNYGNSWYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRASKSISKYLAWYQQKPGKAPELLIYSGSTLQSGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQHNEYPFTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.881851 | 22.782162 | 222 | 214 | 222 | 214 | 222 | 214 | 104 | heavy chain of antibody as0326 | light chain of as0326 | mus musculus | mus musculus | L | protein | microfibril-associated glycoprotein 4 | homo sapiens | 37 | 17 | 0.89 | HL | train |
7zmk_M_N | 7zmk | structure of human mfap4 in complex with the fab fragment of the as0326 monoclonal antibody | no | cell adhesion | 2022-04-19 | 2023-03-01 | x-ray diffraction | 3.4 | 0.277 | 0.239 | 39863929 | 10.1016/j.ymthe.2025.01.038 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | M | N | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSYWMHWVRQARGQRLEWIGVIHPNSGNTKYNEKFRSRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAREMWNYGNSWYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRASKSISKYLAWYQQKPGKAPELLIYSGSTLQSGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQHNEYPFTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSYWMHWVRQARGQRLEWIGVIHPNSGNTKYNEKFRSRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAREMWNYGNSWYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVE | DIQMTQSPSSLSASVGDRVTITCRASKSISKYLAWYQQKPGKAPELLIYSGSTLQSGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQHNEYPFTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.807251 | 22.963884 | 222 | 214 | 221 | 214 | 221 | 214 | 101 | heavy chain of antibody as0326 | light chain of as0326 | mus musculus | mus musculus | O | protein | microfibril-associated glycoprotein 4 | homo sapiens | 41 | 17 | 0.85 | HL | train |
7zmk_P_Q | 7zmk | structure of human mfap4 in complex with the fab fragment of the as0326 monoclonal antibody | no | cell adhesion | 2022-04-19 | 2023-03-01 | x-ray diffraction | 3.4 | 0.277 | 0.239 | 39863929 | 10.1016/j.ymthe.2025.01.038 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | P | Q | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSYWMHWVRQARGQRLEWIGVIHPNSGNTKYNEKFRSRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAREMWNYGNSWYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRASKSISKYLAWYQQKPGKAPELLIYSGSTLQSGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQHNEYPFTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSYWMHWVRQARGQRLEWIGVIHPNSGNTKYNEKFRSRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAREMWNYGNSWYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRASKSISKYLAWYQQKPGKAPELLIYSGSTLQSGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQHNEYPFTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.90616 | 22.864964 | 222 | 214 | 222 | 214 | 222 | 214 | 105 | heavy chain of antibody as0326 | light chain of as0326 | mus musculus | mus musculus | R | protein | microfibril-associated glycoprotein 4 | homo sapiens | 38 | 17 | 0.85 | HL | train |
7zmk_S_T | 7zmk | structure of human mfap4 in complex with the fab fragment of the as0326 monoclonal antibody | no | cell adhesion | 2022-04-19 | 2023-03-01 | x-ray diffraction | 3.4 | 0.277 | 0.239 | 39863929 | 10.1016/j.ymthe.2025.01.038 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | S | T | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSYWMHWVRQARGQRLEWIGVIHPNSGNTKYNEKFRSRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAREMWNYGNSWYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRASKSISKYLAWYQQKPGKAPELLIYSGSTLQSGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQHNEYPFTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSYWMHWVRQARGQRLEWIGVIHPNSGNTKYNEKFRSRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAREMWNYGNSWYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRASKSISKYLAWYQQKPGKAPELLIYSGSTLQSGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQHNEYPFTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.474274 | 22.658287 | 222 | 214 | 222 | 214 | 222 | 214 | 103 | heavy chain of antibody as0326 | light chain of as0326 | mus musculus | mus musculus | U | protein | microfibril-associated glycoprotein 4 | homo sapiens | 39 | 18 | 0.86 | HL | train |
7zmk_V_W | 7zmk | structure of human mfap4 in complex with the fab fragment of the as0326 monoclonal antibody | no | cell adhesion | 2022-04-19 | 2023-03-01 | x-ray diffraction | 3.4 | 0.277 | 0.239 | 39863929 | 10.1016/j.ymthe.2025.01.038 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | V | W | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSYWMHWVRQARGQRLEWIGVIHPNSGNTKYNEKFRSRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAREMWNYGNSWYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRASKSISKYLAWYQQKPGKAPELLIYSGSTLQSGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQHNEYPFTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QMQLVQSGPEVKKPGTSVKVSCKASGFTFTSYWMHWVRQARGQRLEWIGVIHPNSGNTKYNEKFRSRVTMTTDTSTSTAYMELRSLRSDDTAVYYCAREMWNYGNSWYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVE | DIQMTQSPSSLSASVGDRVTITCRASKSISKYLAWYQQKPGKAPELLIYSGSTLQSGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQHNEYPFTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.015892 | 22.854574 | 222 | 214 | 221 | 214 | 221 | 214 | 101 | heavy chain of antibody as0326 | light chain of as0326 | mus musculus | mus musculus | X | protein | microfibril-associated glycoprotein 4 | homo sapiens | 39 | 18 | 0.86 | HL | train |
7xl0_A | 7xl0 | crystal structure of vobarilizumab at 1.70 angstrom | no | immune system | 2022-04-20 | 2022-11-09 | x-ray diffraction | 1.7 | 0.196 | 0.152 | 36153698 | 10.1002/pro.4450 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | A | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGSVFKINVMAWYRQAPGKGRELVAGIISGGSTSYADSVKGRFTISRDNAKNTLYLQMNSLRPEDTAVYYCAFITTESDYDLGRRYWGQGTLVTVSSAAAHHHHHH | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGSVFKINVMAWYRQAPGKGRELVAGIISGGSTSYADSVKGRFTISRDNAKNTLYLQMNSLRPEDTAVYYCAFITTESDYDLGRRYWGQGTLVTVSS | N.A. | 14.541708 | 0 | 130 | 0 | 121 | 0 | 121 | 0 | 0 | nanobody vobarilizumab | N.A. | lama glama | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7xl0_B | 7xl0 | crystal structure of vobarilizumab at 1.70 angstrom | no | immune system | 2022-04-20 | 2022-11-09 | x-ray diffraction | 1.7 | 0.196 | 0.152 | 36153698 | 10.1002/pro.4450 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGSVFKINVMAWYRQAPGKGRELVAGIISGGSTSYADSVKGRFTISRDNAKNTLYLQMNSLRPEDTAVYYCAFITTESDYDLGRRYWGQGTLVTVSSAAAHHHHHH | N.A. | QLVESGGGLVQPGGSLRLSCAASGSVFKINVMAWYRQAPGKGRELVAGIISGGSTSYADSVKGRFTISRDNAKNTLYLQMNSLRPEDTAVYYCAFITTESDYDLGRRYWGQGTLVTVSS | N.A. | 14.439677 | 0 | 130 | 0 | 119 | 0 | 119 | 0 | 0 | nanobody vobarilizumab | N.A. | lama glama | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7xl1_A | 7xl1 | crystal structure of chimeric 7d12-vob nanobody at 1.65 angstrom | no | immune system | 2022-04-20 | 2022-11-09 | x-ray diffraction | 1.65 | 0.206 | 0.156 | 36153698 | 10.1002/pro.4450 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | A | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGRTSRSYGMGWYRQAPGKGRELVAGISWRGDSTGYADSVKGRFTISRDNAKNTLYLQMNSLRPEDTAVYYCAFAAGSAWYGTLYEYDYWGQGTLVTVSSAAAHHHHHH | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGRTSRSYGMGWYRQAPGKGRELVAGISWRGDSTGYADSVKGRFTISRDNAKNTLYLQMNSLRPEDTAVYYCAFAAGSAWYGTLYEYDYWGQGTLVTVSSAA | N.A. | 14.787859 | 0 | 133 | 0 | 124 | 0 | 126 | 0 | 0 | chimeric 7d12-vob nanobody | N.A. | lama glama | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7xl1_B | 7xl1 | crystal structure of chimeric 7d12-vob nanobody at 1.65 angstrom | no | immune system | 2022-04-20 | 2022-11-09 | x-ray diffraction | 1.65 | 0.206 | 0.156 | 36153698 | 10.1002/pro.4450 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGRTSRSYGMGWYRQAPGKGRELVAGISWRGDSTGYADSVKGRFTISRDNAKNTLYLQMNSLRPEDTAVYYCAFAAGSAWYGTLYEYDYWGQGTLVTVSSAAAHHHHHH | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGRTSRSYGMGWYRQAPGKGRELVAGISWRGDSTGYADSVKGRFTISRDNAKNTLYLQMNSLRPEDTAVYYCAFAAGSAWYGTLYEYDYWGQGTLVTVSSA | N.A. | 14.818917 | 0 | 133 | 0 | 125 | 0 | 125 | 0 | 0 | chimeric 7d12-vob nanobody | N.A. | lama glama | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
7ur4_I_J | 7ur4 | cryo-em structure of the neutralizing antibody mpv467 in complex with prefusion human metapneumovirus f glycoprotein | yes | viral protein/immune system | 2022-04-21 | 2022-06-08 | electron microscopy | 3.34 | N.A. | N.A. | 35696580 | 10.1073/pnas.2203326119 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV3 | I | J | LVQSGGGVVRPGTSLRVSCAAFDFNFRDYGMHWVRQAPGKGLEWVAGIWYDGSNKDYADSVKGRFTISRDNSQNTLYLQMNSLRVEDTAVYYCARDPRTHREGALSHFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | ELTQDPAVSVALGQTVRITCQGDSLRNYFAGWYQQKPGQAPLLVLYGENIRPSGIPDRFSGSSSGNTVSLTITGAQAEDEADYYCNSRDNSGNHWVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | LVQSGGGVVRPGTSLRVSCAAFDFNFRDYGMHWVRQAPGKGLEWVAGIWYDGSNKDYADSVKGRFTISRDNSQNTLYLQMNSLRVEDTAVYYCARDPRTHREGALSHFDSWGQGTLVTVSS | ELTQDPAVSVALGQTVRITCQGDSLRNYFAGWYQQKPGQAPLLVLYGENIRPSGIPDRFSGSSSGNTVSLTITGAQAEDEADYYCNSRDNSGNHWVFGGGTRLTVL | 14.057394 | 13.35476 | 223 | 211 | 121 | 106 | 121 | 106 | 49 | mpv467 fab heavy chain | mpv467 fab light chain | homo sapiens | homo sapiens | A | protein | fusion glycoprotein f0 | human metapneumovirus | 52 | 20 | 0.74 | HL | train |
7ur4_F_G | 7ur4 | cryo-em structure of the neutralizing antibody mpv467 in complex with prefusion human metapneumovirus f glycoprotein | yes | viral protein/immune system | 2022-04-21 | 2022-06-08 | electron microscopy | 3.34 | N.A. | N.A. | 35696580 | 10.1073/pnas.2203326119 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV3 | F | G | LVQSGGGVVRPGTSLRVSCAAFDFNFRDYGMHWVRQAPGKGLEWVAGIWYDGSNKDYADSVKGRFTISRDNSQNTLYLQMNSLRVEDTAVYYCARDPRTHREGALSHFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | ELTQDPAVSVALGQTVRITCQGDSLRNYFAGWYQQKPGQAPLLVLYGENIRPSGIPDRFSGSSSGNTVSLTITGAQAEDEADYYCNSRDNSGNHWVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | LVQSGGGVVRPGTSLRVSCAAFDFNFRDYGMHWVRQAPGKGLEWVAGIWYDGSNKDYADSVKGRFTISRDNSQNTLYLQMNSLRVEDTAVYYCARDPRTHREGALSHFDSWGQGTLVTVSS | ELTQDPAVSVALGQTVRITCQGDSLRNYFAGWYQQKPGQAPLLVLYGENIRPSGIPDRFSGSSSGNTVSLTITGAQAEDEADYYCNSRDNSGNHWVFGGGTRLTVL | 14.058824 | 13.361415 | 223 | 211 | 121 | 106 | 121 | 106 | 48 | mpv467 fab heavy chain | mpv467 fab light chain | homo sapiens | homo sapiens | B | protein | fusion glycoprotein f0 | human metapneumovirus | 54 | 21 | 0.75 | HL | train |
7ur4_H_L | 7ur4 | cryo-em structure of the neutralizing antibody mpv467 in complex with prefusion human metapneumovirus f glycoprotein | yes | viral protein/immune system | 2022-04-21 | 2022-06-08 | electron microscopy | 3.34 | N.A. | N.A. | 35696580 | 10.1073/pnas.2203326119 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV3 | H | L | LVQSGGGVVRPGTSLRVSCAAFDFNFRDYGMHWVRQAPGKGLEWVAGIWYDGSNKDYADSVKGRFTISRDNSQNTLYLQMNSLRVEDTAVYYCARDPRTHREGALSHFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | ELTQDPAVSVALGQTVRITCQGDSLRNYFAGWYQQKPGQAPLLVLYGENIRPSGIPDRFSGSSSGNTVSLTITGAQAEDEADYYCNSRDNSGNHWVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | LVQSGGGVVRPGTSLRVSCAAFDFNFRDYGMHWVRQAPGKGLEWVAGIWYDGSNKDYADSVKGRFTISRDNSQNTLYLQMNSLRVEDTAVYYCARDPRTHREGALSHFDSWGQGTLVTVSS | ELTQDPAVSVALGQTVRITCQGDSLRNYFAGWYQQKPGQAPLLVLYGENIRPSGIPDRFSGSSSGNTVSLTITGAQAEDEADYYCNSRDNSGNHWVFGGGTRLTVL | 14.018197 | 13.373994 | 223 | 211 | 121 | 106 | 121 | 106 | 54 | mpv467 fab heavy chain | mpv467 fab light chain | homo sapiens | homo sapiens | C | protein | fusion glycoprotein f0 | human metapneumovirus | 53 | 19 | 0.73 | HL | train |
7ura_H_L | 7ura | human porcn in complex with palmitoleoyl-coa | no | transferase/transferase inhibitor | 2022-04-21 | 2022-07-20 | electron microscopy | 3.11 | N.A. | N.A. | 35831507 | 10.1038/s41586-022-04952-2 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | H | L | MGWSCIILFLVATATGVHSEIQLQQSGAELVKPGASVKMSCKVSGYSFTGYNMNWVKQSHGKSLEWIGNINPYYVSTNYNQKFTGKATFTVDRSSSTAYMQLDSLTSEDSAVYYCARSYGSSHTFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | MGWSCIILFLVATARTGVHSDIHMTQSPASLSAFVGETVTITCRTSENIFSYLAWYQQKQGKSPQLLVYNAKTLTSGVPSRFSGSGSGTQFSLKINSLQPEDFGSYYCQHHYGSPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EIQLQQSGAELVKPGASVKMSCKVSGYSFTGYNMNWVKQSHGKSLEWIGNINPYYVSTNYNQKFTGKATFTVDRSSSTAYMQLDSLTSEDSAVYYCARSYGSSHTFAYWGQGTLVTVSS | DIHMTQSPASLSAFVGETVTITCRTSENIFSYLAWYQQKQGKSPQLLVYNAKTLTSGVPSRFSGSGSGTQFSLKINSLQPEDFGSYYCQHHYGSPYTFGGGTKLEIK | 13.684275 | 13.280001 | 250 | 234 | 119 | 107 | 119 | 107 | 41 | 2c11 heavy chain | 2c11 light chain | mus musculus | mus musculus | A | protein | isoform 2 of protein-serine o-palmitoleoyltransferase porcupine | homo sapiens | 51 | 19 | 0.76 | HL | train |
7urc_H_L | 7urc | human porcn in complex with lgk974 | no | transferase/transferase inhibitor | 2022-04-21 | 2022-07-20 | electron microscopy | 3.14 | N.A. | N.A. | 35831507 | 10.1038/s41586-022-04952-2 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | H | L | MGWSCIILFLVATATGVHSEIQLQQSGAELVKPGASVKMSCKVSGYSFTGYNMNWVKQSHGKSLEWIGNINPYYVSTNYNQKFTGKATFTVDRSSSTAYMQLDSLTSEDSAVYYCARSYGSSHTFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | MGWSCIILFLVATARTGVHSDIHMTQSPASLSAFVGETVTITCRTSENIFSYLAWYQQKQGKSPQLLVYNAKTLTSGVPSRFSGSGSGTQFSLKINSLQPEDFGSYYCQHHYGSPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EIQLQQSGAELVKPGASVKMSCKVSGYSFTGYNMNWVKQSHGKSLEWIGNINPYYVSTNYNQKFTGKATFTVDRSSSTAYMQLDSLTSEDSAVYYCARSYGSSHTFAYWGQGTLVTVSS | DIHMTQSPASLSAFVGETVTITCRTSENIFSYLAWYQQKQGKSPQLLVYNAKTLTSGVPSRFSGSGSGTQFSLKINSLQPEDFGSYYCQHHYGSPYTFGGGTKLEIK | 13.752269 | 13.337268 | 250 | 234 | 119 | 107 | 119 | 107 | 39 | 2c11 heavy chain | 2c11 light chain | mus musculus | mus musculus | A | protein | isoform 2 of protein-serine o-palmitoleoyltransferase porcupine | homo sapiens | 55 | 20 | 0.8 | HL | train |
7urd_H_L | 7urd | human porcn in complex with lgk974 and wnt3a peptide | no | transferase/transferase inhibitor | 2022-04-21 | 2022-07-20 | electron microscopy | 2.92 | N.A. | N.A. | 35831507 | 10.1038/s41586-022-04952-2 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | H | L | MGWSCIILFLVATATGVHSEIQLQQSGAELVKPGASVKMSCKVSGYSFTGYNMNWVKQSHGKSLEWIGNINPYYVSTNYNQKFTGKATFTVDRSSSTAYMQLDSLTSEDSAVYYCARSYGSSHTFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | MGWSCIILFLVATARTGVHSDIHMTQSPASLSAFVGETVTITCRTSENIFSYLAWYQQKQGKSPQLLVYNAKTLTSGVPSRFSGSGSGTQFSLKINSLQPEDFGSYYCQHHYGSPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EIQLQQSGAELVKPGASVKMSCKVSGYSFTGYNMNWVKQSHGKSLEWIGNINPYYVSTNYNQKFTGKATFTVDRSSSTAYMQLDSLTSEDSAVYYCARSYGSSHTFAYWGQGTLVTVSS | DIHMTQSPASLSAFVGETVTITCRTSENIFSYLAWYQQKQGKSPQLLVYNAKTLTSGVPSRFSGSGSGTQFSLKINSLQPEDFGSYYCQHHYGSPYTFGGGTKLEIK | 13.7102 | 13.27284 | 250 | 234 | 119 | 107 | 119 | 107 | 41 | 2c11 heavy chain | 2c11 light chain | mus musculus | mus musculus | A | protein | isoform 2 of protein-serine o-palmitoleoyltransferase porcupine | homo sapiens | 55 | 20 | 0.74 | HL | train |
7urf_O_P | 7urf | human hhat h379c in complex with shh n-terminal peptide | no | transferase/transferase inhibitor | 2022-04-21 | 2022-07-20 | electron microscopy | 2.8 | N.A. | N.A. | 35831507 | 10.1038/s41586-022-04952-2 | 0 | auth_asym_id | VH:VL | IGHV7 | IGKV2 | O | P | MGWSCIILFLVATATGVHSQIQLVQSGPELKKPGETVKISCKASGYTFTNYGMNWVRQAPGKGLKWMGWINTYTGEPTYADDFKGRFAFSLETSASTAYLQINNLKDEDMATYFCARVWNYDYYFDYWGQGTTLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH | MGWSCIILFLVATARTGVHSDVLMTQTPLSLPVSLGDQVSISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYRVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPWTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | IQLVQSGPELKKPGETVKISCKASGYTFTNYGMNWVRQAPGKGLKWMGWINTYTGEPTYADDFKGRFAFSLETSASTAYLQINNLKDEDMATYFCARVWNYDYYFDYWGQGTTLTVS | VLMTQTPLSLPVSLGDQVSISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYRVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPWTFGGGTKLEIK | 13.871756 | 13.629558 | 250 | 239 | 113 | 111 | 117 | 111 | 39 | 3h02 heavy chain | 3h02 light chain | mus musculus | mus musculus | A | protein | protein-cysteine n-palmitoyltransferase hhat | homo sapiens | 37 | 18 | 0.78 | HL | train |
7ur6_D_E | 7ur6 | cryo-em structure of shiv-elicited, fp-directed rhesus fab rm6561.dh1021.14 in complex with stabilized hiv-1 env ce1176 ds-sosip.664 | no | viral protein/immune system | 2022-04-21 | 2023-04-26 | electron microscopy | 3.46 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV2 | IGLV1 | D | E | QVTLKESGPALVKPTQTLTLTCTFSGFSMSNFGSGIYWIRQPPGKALEWLAGIYWTDSKYYNLSLKTRLTISKDTSKSQVILIMTNMDPVDTATYYCADIRGRYYYSNGFLFDVVGVESWGQGVVVTVSS | QSVLTQPPSASEAARKTVTISCSGSRSNIGSNSVSWYKQVPGTAPKLLIKYNDQRPSGVSDRFSGSKSGTSASLAISGLQTEDEADYYCATWDDSLNGYIFGVGTRLIVL | QVTLKESGPALVKPTQTLTLTCTFSGFSMSNFGSGIYWIRQPPGKALEWLAGIYWTDSKYYNLSLKTRLTISKDTSKSQVILIMTNMDPVDTATYYCADIRGRYYYSNGFLFDVVGVESWGQGVVVTVSS | SVLTQPPSASEAARKTVTISCSGSRSNIGSNSVSWYKQVPGTAPKLLIKYNDQRPSGVSDRFSGSKSGTSASLAISGLQTEDEADYYCATWDDSLNGYIFGVGTRLIV | 15.433562 | 13.525797 | 130 | 110 | 130 | 108 | 130 | 108 | 52 | heavy chain | light chain | macaca mulatta | macaca mulatta | A;C | protein;protein | gp120;gp41 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 17;29 | 8;14 | 1.0;0.88 | HL | train |
7ur6_J_K | 7ur6 | cryo-em structure of shiv-elicited, fp-directed rhesus fab rm6561.dh1021.14 in complex with stabilized hiv-1 env ce1176 ds-sosip.664 | no | viral protein/immune system | 2022-04-21 | 2023-04-26 | electron microscopy | 3.46 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV2 | IGLV1 | J | K | QVTLKESGPALVKPTQTLTLTCTFSGFSMSNFGSGIYWIRQPPGKALEWLAGIYWTDSKYYNLSLKTRLTISKDTSKSQVILIMTNMDPVDTATYYCADIRGRYYYSNGFLFDVVGVESWGQGVVVTVSS | QSVLTQPPSASEAARKTVTISCSGSRSNIGSNSVSWYKQVPGTAPKLLIKYNDQRPSGVSDRFSGSKSGTSASLAISGLQTEDEADYYCATWDDSLNGYIFGVGTRLIVL | QVTLKESGPALVKPTQTLTLTCTFSGFSMSNFGSGIYWIRQPPGKALEWLAGIYWTDSKYYNLSLKTRLTISKDTSKSQVILIMTNMDPVDTATYYCADIRGRYYYSNGFLFDVVGVESWGQGVVVTVSS | SVLTQPPSASEAARKTVTISCSGSRSNIGSNSVSWYKQVPGTAPKLLIKYNDQRPSGVSDRFSGSKSGTSASLAISGLQTEDEADYYCATWDDSLNGYIFGVGTRLIV | 15.43038 | 13.524167 | 130 | 110 | 130 | 108 | 130 | 108 | 52 | heavy chain | light chain | macaca mulatta | macaca mulatta | F;I | protein;protein | gp120;gp41 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 16;30 | 7;15 | 1.0;0.88 | HL | train |
7ur6_H_L | 7ur6 | cryo-em structure of shiv-elicited, fp-directed rhesus fab rm6561.dh1021.14 in complex with stabilized hiv-1 env ce1176 ds-sosip.664 | no | viral protein/immune system | 2022-04-21 | 2023-04-26 | electron microscopy | 3.46 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV2 | IGLV1 | H | L | QVTLKESGPALVKPTQTLTLTCTFSGFSMSNFGSGIYWIRQPPGKALEWLAGIYWTDSKYYNLSLKTRLTISKDTSKSQVILIMTNMDPVDTATYYCADIRGRYYYSNGFLFDVVGVESWGQGVVVTVSS | QSVLTQPPSASEAARKTVTISCSGSRSNIGSNSVSWYKQVPGTAPKLLIKYNDQRPSGVSDRFSGSKSGTSASLAISGLQTEDEADYYCATWDDSLNGYIFGVGTRLIVL | QVTLKESGPALVKPTQTLTLTCTFSGFSMSNFGSGIYWIRQPPGKALEWLAGIYWTDSKYYNLSLKTRLTISKDTSKSQVILIMTNMDPVDTATYYCADIRGRYYYSNGFLFDVVGVESWGQGVVVTVSS | SVLTQPPSASEAARKTVTISCSGSRSNIGSNSVSWYKQVPGTAPKLLIKYNDQRPSGVSDRFSGSKSGTSASLAISGLQTEDEADYYCATWDDSLNGYIFGVGTRLIV | 15.431005 | 13.526978 | 130 | 110 | 130 | 108 | 130 | 108 | 51 | heavy chain | light chain | macaca mulatta | macaca mulatta | G;B | protein;protein | gp120;gp41 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 18;28 | 8;13 | 1.0;0.87 | HL | train |
7xld_B | 7xld | crystal structure of isdh linker-neat3 bound to a nanobody (vhh) | no | metal transport | 2022-04-21 | 2023-05-31 | x-ray diffraction | 1.65 | 0.197 | 0.148 | 37330175 | 10.1016/j.jbc.2023.104927 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | ELQLVESGGGLVQPGGSLSLSCEVSGFSFDDVDNFIIAWFRQAPGKEREGVSFLRKYDMSTYYAESVKGRFTISSDNARDTVYLQMTNLKPEDTAVYYCALDREGFVFEQGMDFWGKGTQVTVSSAAGHHHHHH | N.A. | ELQLVESGGGLVQPGGSLSLSCEVSGFSFDDVDNFIIAWFRQAPGKEREGVSFLRKYDMSTYYAESVKGRFTISSDNARDTVYLQMTNLKPEDTAVYYCALDREGFVFEQGMDFWGKGTQVTVSS | N.A. | 13.942143 | 0 | 134 | 0 | 125 | 0 | 125 | 0 | 0 | nanobody vhh6 | N.A. | lama glama | N.A. | A | protein | iron-regulated surface determinant protein h | staphylococcus aureus subsp. aureus mu50 | 36 | 10 | 0.62 | H_only | train |
7xli_B | 7xli | crystal structure of isdb linker-neat2 bound to a nanobody (vhh) | no | metal transport | 2022-04-21 | 2023-05-31 | x-ray diffraction | 1.7 | 0.237 | 0.209 | 37330175 | 10.1016/j.jbc.2023.104927 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | ELQLVESGGGLVQPGGSLSLSCEVSGFSFDDVDNFIIAWFRQAPGKEREGVSFLRKYDMSTYYAESVKGRFTISSDNARDTVYLQMTNLKPEDTAVYYCALDREGFVFEQGMDFWGKGTQVTVSSAAGHHHHHH | N.A. | ELQLVESGGGLVQPGGSLSLSCEVSGFSFDDVDNFIIAWFRQAPGKEREGVSFLRKYDMSTYYAESVKGRFTISSDNARDTVYLQMTNLKPEDTAVYYCALDREGFVFEQGMDFWGKGTQVTVSS | N.A. | 13.913745 | 0 | 134 | 0 | 125 | 0 | 125 | 0 | 0 | vhh6 nanobody | N.A. | lama glama | N.A. | A | protein | iron-regulated surface determinant protein b | staphylococcus aureus subsp. aureus mu50 | 36 | 9 | 0.56 | H_only | train |
7urq_H_L | 7urq | crystal structure of sars-cov-2 s delta variant receptor-binding domain (rbd) in complex cov11 fab crystal form 1 | yes | viral protein/immune system | 2022-04-22 | 2022-05-04 | x-ray diffraction | 2.05 | 0.208 | 0.177 | 37334379 | 10.3389/fimmu.2023.1178355 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | H | L | EVQLVESGGGLIQPGGSLRLSCAASGFIVSRNYMIWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLEVAGAIDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSISSSYLAWYQQKPGQAPRLLIYGATSRATGTPDRFSGSGSGTDFTLTINRLEPEDFAVYYCQQYGSSPGYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSRDSTYSLGSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLIQPGGSLRLSCAASGFIVSRNYMIWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLEVAGAIDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | EIVLTQSPGTLSLSPGERATLSCRASQSISSSYLAWYQQKPGQAPRLLIYGATSRATGTPDRFSGSGSGTDFTLTINRLEPEDFAVYYCQQYGSSPGYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSRDSTYSLGSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 20.766912 | 23.253897 | 221 | 216 | 214 | 215 | 219 | 215 | 100 | cov11 fab heavy chain | cov11 fab light chain | homo sapiens | homo sapiens | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 60 | 24 | 0.83 | HL | train |
7urx_H_L | 7urx | sj25c1 fab in complex with soluble cd19 | no | protein binding | 2022-04-22 | 2023-02-15 | electron microscopy | 3.4 | N.A. | N.A. | 36867678 | 10.1126/sciimmunol.adf1426 | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGKV1 | H | L | MGWSCIILFLVATATGVHSEVKLQQSGAELVRPGSSVKISCKASGYAFSSYWMNWVKQRPGQGLEWIGQIYPGDGDTNYNGKFKGQATLTADKSSSTAYMQLSGLTSEDSAVYFCARKTISSVVDFYFDYWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCHHHHHHHH | MGWSCIILFLVATATGVHSDIELTQSPKFMSTSVGDRVSVTCKASQNVGTNVAWYQQKPGQSPKPLIYSATYRNSGVPDRFTGSGSGTDFTLTITNVQSKDLADYFCQQYNRYPYTSGGGTKLEIKRTRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVKLQQSGAELVRPGSSVKISCKASGYAFSSYWMNWVKQRPGQGLEWIGQIYPGDGDTNYNGKFKGQATLTADKSSSTAYMQLSGLTSEDSAVYFCARKTISSVVDFYFDYWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIELTQSPKFMSTSVGDRVSVTCKASQNVGTNVAWYQQKPGQSPKPLIYSATYRNSGVPDRFTGSGSGTDFTLTITNVQSKDLADYFCQQYNRYPYTSGGGTKLEIKRTRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.202765 | 23.231739 | 252 | 235 | 222 | 215 | 222 | 215 | 101 | sj25c1 fab heavy chain | sj25c1 fab light chain | mus musculus | mus musculus | C | protein | b-lymphocyte antigen cd19 | homo sapiens | 44 | 21 | 0.91 | HL | train |
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