pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 365
values | r_factor stringclasses 358
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values | abangle stringlengths 40 40 ⌀ | annotation_H stringlengths 44 44 ⌀ | annotation_L stringlengths 44 44 ⌀ | imgt_H stringlengths 37 37 ⌀ | imgt_L stringlengths 37 37 ⌀ | sequence_raw stringlengths 41 41 | sequence_H stringlengths 41 41 ⌀ | sequence_L stringlengths 41 41 ⌀ | structure stringlengths 38 38 | structure_chothia stringlengths 46 46 | in_nr_set bool 2
classes | curated_quality_dataset bool 2
classes | split stringclasses 3
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
8der | H | L | 0 | A | protein | null | spike glycoprotein e2 | VIRAL PROTEIN | 06/28/23 | Cryo-EM local refinement of antibody SKV16 in complex with VEEV alphavirus spike glycoprotein | Macaca; Venezuelan equine encephalitis virus | macaca | macaca | venezuelan equine encephalitis virus | Casner, R.G., Verardi, R., Roederer, M., Shapiro, L. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8der/abangle/8der.abangle | sabdab_dataset/8der/annotation/8der_H_VH.ann | sabdab_dataset/8der/annotation/8der_L_VL.ann | sabdab_dataset/8der/imgt/8der_H_H.ann | sabdab_dataset/8der/imgt/8der_L_L.ann | sabdab_dataset/8der/sequence/8der_raw.pdb | sabdab_dataset/8der/sequence/8der_H_VH.fa | sabdab_dataset/8der/sequence/8der_L_VL.fa | sabdab_dataset/8der/structure/8der.pdb | sabdab_dataset/8der/structure/chothia/8der.pdb | false | false | train |
8der | W | V | 0 | C | protein | null | spike glycoprotein e2 | VIRAL PROTEIN | 06/28/23 | Cryo-EM local refinement of antibody SKV16 in complex with VEEV alphavirus spike glycoprotein | Macaca; Venezuelan equine encephalitis virus | macaca | macaca | venezuelan equine encephalitis virus | Casner, R.G., Verardi, R., Roederer, M., Shapiro, L. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8der/abangle/8der.abangle | sabdab_dataset/8der/annotation/8der_W_VH.ann | sabdab_dataset/8der/annotation/8der_V_VL.ann | sabdab_dataset/8der/imgt/8der_W_H.ann | sabdab_dataset/8der/imgt/8der_V_L.ann | sabdab_dataset/8der/sequence/8der_raw.pdb | sabdab_dataset/8der/sequence/8der_W_VH.fa | sabdab_dataset/8der/sequence/8der_V_VL.fa | sabdab_dataset/8der/structure/8der.pdb | sabdab_dataset/8der/structure/chothia/8der.pdb | false | false | train |
8der | X | Y | 0 | B | protein | null | spike glycoprotein e2 | VIRAL PROTEIN | 06/28/23 | Cryo-EM local refinement of antibody SKV16 in complex with VEEV alphavirus spike glycoprotein | Macaca; Venezuelan equine encephalitis virus | macaca | macaca | venezuelan equine encephalitis virus | Casner, R.G., Verardi, R., Roederer, M., Shapiro, L. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8der/abangle/8der.abangle | sabdab_dataset/8der/annotation/8der_X_VH.ann | sabdab_dataset/8der/annotation/8der_Y_VL.ann | sabdab_dataset/8der/imgt/8der_X_H.ann | sabdab_dataset/8der/imgt/8der_Y_L.ann | sabdab_dataset/8der/sequence/8der_raw.pdb | sabdab_dataset/8der/sequence/8der_X_VH.fa | sabdab_dataset/8der/sequence/8der_Y_VL.fa | sabdab_dataset/8der/structure/8der.pdb | sabdab_dataset/8der/structure/chothia/8der.pdb | false | false | train |
8df1 | H | L | 0 | A | protein | null | chitinase-3-like protein 1 | IMMUNE SYSTEM | 03/01/23 | Chi3l1 bound by antibody C59 | Homo sapiens; Oryctolagus cuniculus | oryctolagus cuniculus | oryctolagus cuniculus | homo sapiens | Wrapp, D., McLellan, J.S. | 3.3 | X-RAY DIFFRACTION | 0.243 | 0.206 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8df1/abangle/8df1.abangle | sabdab_dataset/8df1/annotation/8df1_H_VH.ann | sabdab_dataset/8df1/annotation/8df1_L_VL.ann | sabdab_dataset/8df1/imgt/8df1_H_H.ann | sabdab_dataset/8df1/imgt/8df1_L_L.ann | sabdab_dataset/8df1/sequence/8df1_raw.pdb | sabdab_dataset/8df1/sequence/8df1_H_VH.fa | sabdab_dataset/8df1/sequence/8df1_L_VL.fa | sabdab_dataset/8df1/structure/8df1.pdb | sabdab_dataset/8df1/structure/chothia/8df1.pdb | true | false | train |
8df1 | M | N | 0 | B | protein | null | chitinase-3-like protein 1 | IMMUNE SYSTEM | 03/01/23 | Chi3l1 bound by antibody C59 | Homo sapiens; Oryctolagus cuniculus | oryctolagus cuniculus | oryctolagus cuniculus | homo sapiens | Wrapp, D., McLellan, J.S. | 3.3 | X-RAY DIFFRACTION | 0.243 | 0.206 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8df1/abangle/8df1.abangle | sabdab_dataset/8df1/annotation/8df1_M_VH.ann | sabdab_dataset/8df1/annotation/8df1_N_VL.ann | sabdab_dataset/8df1/imgt/8df1_M_H.ann | sabdab_dataset/8df1/imgt/8df1_N_L.ann | sabdab_dataset/8df1/sequence/8df1_raw.pdb | sabdab_dataset/8df1/sequence/8df1_M_VH.fa | sabdab_dataset/8df1/sequence/8df1_N_VL.fa | sabdab_dataset/8df1/structure/8df1.pdb | sabdab_dataset/8df1/structure/chothia/8df1.pdb | true | false | test |
8df1 | O | P | 0 | C | protein | null | chitinase-3-like protein 1 | IMMUNE SYSTEM | 03/01/23 | Chi3l1 bound by antibody C59 | Homo sapiens; Oryctolagus cuniculus | oryctolagus cuniculus | oryctolagus cuniculus | homo sapiens | Wrapp, D., McLellan, J.S. | 3.3 | X-RAY DIFFRACTION | 0.243 | 0.206 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8df1/abangle/8df1.abangle | sabdab_dataset/8df1/annotation/8df1_O_VH.ann | sabdab_dataset/8df1/annotation/8df1_P_VL.ann | sabdab_dataset/8df1/imgt/8df1_O_H.ann | sabdab_dataset/8df1/imgt/8df1_P_L.ann | sabdab_dataset/8df1/sequence/8df1_raw.pdb | sabdab_dataset/8df1/sequence/8df1_O_VH.fa | sabdab_dataset/8df1/sequence/8df1_P_VL.fa | sabdab_dataset/8df1/structure/8df1.pdb | sabdab_dataset/8df1/structure/chothia/8df1.pdb | true | false | train |
8df1 | Q | R | 0 | D | protein | null | chitinase-3-like protein 1 | IMMUNE SYSTEM | 03/01/23 | Chi3l1 bound by antibody C59 | Homo sapiens; Oryctolagus cuniculus | oryctolagus cuniculus | oryctolagus cuniculus | homo sapiens | Wrapp, D., McLellan, J.S. | 3.3 | X-RAY DIFFRACTION | 0.243 | 0.206 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8df1/abangle/8df1.abangle | sabdab_dataset/8df1/annotation/8df1_Q_VH.ann | sabdab_dataset/8df1/annotation/8df1_R_VL.ann | sabdab_dataset/8df1/imgt/8df1_Q_H.ann | sabdab_dataset/8df1/imgt/8df1_R_L.ann | sabdab_dataset/8df1/sequence/8df1_raw.pdb | sabdab_dataset/8df1/sequence/8df1_Q_VH.fa | sabdab_dataset/8df1/sequence/8df1_R_VL.fa | sabdab_dataset/8df1/structure/8df1.pdb | sabdab_dataset/8df1/structure/chothia/8df1.pdb | true | false | validation |
8df1 | S | T | 0 | E | protein | null | chitinase-3-like protein 1 | IMMUNE SYSTEM | 03/01/23 | Chi3l1 bound by antibody C59 | Homo sapiens; Oryctolagus cuniculus | oryctolagus cuniculus | oryctolagus cuniculus | homo sapiens | Wrapp, D., McLellan, J.S. | 3.3 | X-RAY DIFFRACTION | 0.243 | 0.206 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8df1/abangle/8df1.abangle | sabdab_dataset/8df1/annotation/8df1_S_VH.ann | sabdab_dataset/8df1/annotation/8df1_T_VL.ann | sabdab_dataset/8df1/imgt/8df1_S_H.ann | sabdab_dataset/8df1/imgt/8df1_T_L.ann | sabdab_dataset/8df1/sequence/8df1_raw.pdb | sabdab_dataset/8df1/sequence/8df1_S_VH.fa | sabdab_dataset/8df1/sequence/8df1_T_VL.fa | sabdab_dataset/8df1/structure/8df1.pdb | sabdab_dataset/8df1/structure/chothia/8df1.pdb | true | false | train |
8df1 | U | V | 0 | F | protein | null | chitinase-3-like protein 1 | IMMUNE SYSTEM | 03/01/23 | Chi3l1 bound by antibody C59 | Homo sapiens; Oryctolagus cuniculus | oryctolagus cuniculus | oryctolagus cuniculus | homo sapiens | Wrapp, D., McLellan, J.S. | 3.3 | X-RAY DIFFRACTION | 0.243 | 0.206 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8df1/abangle/8df1.abangle | sabdab_dataset/8df1/annotation/8df1_U_VH.ann | sabdab_dataset/8df1/annotation/8df1_V_VL.ann | sabdab_dataset/8df1/imgt/8df1_U_H.ann | sabdab_dataset/8df1/imgt/8df1_V_L.ann | sabdab_dataset/8df1/sequence/8df1_raw.pdb | sabdab_dataset/8df1/sequence/8df1_U_VH.fa | sabdab_dataset/8df1/sequence/8df1_V_VL.fa | sabdab_dataset/8df1/structure/8df1.pdb | sabdab_dataset/8df1/structure/chothia/8df1.pdb | true | false | train |
8df5 | A | B | 0 | R | protein | null | spike protein s1 | VIRAL PROTEIN/Hydrolase/Immune System | 08/03/22 | SARS-CoV-2 Beta RBD in complex with human ACE2 and S304 Fab and S309 Fab | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | McCallum, M., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D. | 2.7 | X-RAY DIFFRACTION | 0.217 | 0.177 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8df5/abangle/8df5.abangle | sabdab_dataset/8df5/annotation/8df5_A_VH.ann | sabdab_dataset/8df5/annotation/8df5_B_VL.ann | sabdab_dataset/8df5/imgt/8df5_A_H.ann | sabdab_dataset/8df5/imgt/8df5_B_L.ann | sabdab_dataset/8df5/sequence/8df5_raw.pdb | sabdab_dataset/8df5/sequence/8df5_A_VH.fa | sabdab_dataset/8df5/sequence/8df5_B_VL.fa | sabdab_dataset/8df5/structure/8df5.pdb | sabdab_dataset/8df5/structure/chothia/8df5.pdb | true | false | train |
8df5 | C | D | 0 | S | protein | null | spike protein s1 | VIRAL PROTEIN/Hydrolase/Immune System | 08/03/22 | SARS-CoV-2 Beta RBD in complex with human ACE2 and S304 Fab and S309 Fab | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | McCallum, M., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D. | 2.7 | X-RAY DIFFRACTION | 0.217 | 0.177 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8df5/abangle/8df5.abangle | sabdab_dataset/8df5/annotation/8df5_C_VH.ann | sabdab_dataset/8df5/annotation/8df5_D_VL.ann | sabdab_dataset/8df5/imgt/8df5_C_H.ann | sabdab_dataset/8df5/imgt/8df5_D_L.ann | sabdab_dataset/8df5/sequence/8df5_raw.pdb | sabdab_dataset/8df5/sequence/8df5_C_VH.fa | sabdab_dataset/8df5/sequence/8df5_D_VL.fa | sabdab_dataset/8df5/structure/8df5.pdb | sabdab_dataset/8df5/structure/chothia/8df5.pdb | true | false | train |
8df5 | H | L | 0 | R | protein | null | spike protein s1 | VIRAL PROTEIN/Hydrolase/Immune System | 08/03/22 | SARS-CoV-2 Beta RBD in complex with human ACE2 and S304 Fab and S309 Fab | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | McCallum, M., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D. | 2.7 | X-RAY DIFFRACTION | 0.217 | 0.177 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8df5/abangle/8df5.abangle | sabdab_dataset/8df5/annotation/8df5_H_VH.ann | sabdab_dataset/8df5/annotation/8df5_L_VL.ann | sabdab_dataset/8df5/imgt/8df5_H_H.ann | sabdab_dataset/8df5/imgt/8df5_L_L.ann | sabdab_dataset/8df5/sequence/8df5_raw.pdb | sabdab_dataset/8df5/sequence/8df5_H_VH.fa | sabdab_dataset/8df5/sequence/8df5_L_VL.fa | sabdab_dataset/8df5/structure/8df5.pdb | sabdab_dataset/8df5/structure/chothia/8df5.pdb | true | false | train |
8df5 | M | N | 0 | S | protein | null | spike protein s1 | VIRAL PROTEIN/Hydrolase/Immune System | 08/03/22 | SARS-CoV-2 Beta RBD in complex with human ACE2 and S304 Fab and S309 Fab | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | McCallum, M., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D. | 2.7 | X-RAY DIFFRACTION | 0.217 | 0.177 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8df5/abangle/8df5.abangle | sabdab_dataset/8df5/annotation/8df5_M_VH.ann | sabdab_dataset/8df5/annotation/8df5_N_VL.ann | sabdab_dataset/8df5/imgt/8df5_M_H.ann | sabdab_dataset/8df5/imgt/8df5_N_L.ann | sabdab_dataset/8df5/sequence/8df5_raw.pdb | sabdab_dataset/8df5/sequence/8df5_M_VH.fa | sabdab_dataset/8df5/sequence/8df5_N_VL.fa | sabdab_dataset/8df5/structure/8df5.pdb | sabdab_dataset/8df5/structure/chothia/8df5.pdb | true | false | train |
8dfg | H | L | 0 | A | protein | null | merozoite surface protein 1 | STRUCTURAL PROTEIN/IMMUNE SYSTEM | 10/12/22 | Crystal structure of potently neutralizing human monoclonal antibody 42D6 Fab in complex with MSP1-19 | Homo sapiens; Plasmodium falciparum 3D7 | homo sapiens | homo sapiens | plasmodium falciparum 3d7 | Patel, P.N., Tang, W.K., Tolia, N.H. | 2 | X-RAY DIFFRACTION | 0.266 | 0.225 | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8dfg/abangle/8dfg.abangle | sabdab_dataset/8dfg/annotation/8dfg_H_VH.ann | sabdab_dataset/8dfg/annotation/8dfg_L_VL.ann | sabdab_dataset/8dfg/imgt/8dfg_H_H.ann | sabdab_dataset/8dfg/imgt/8dfg_L_L.ann | sabdab_dataset/8dfg/sequence/8dfg_raw.pdb | sabdab_dataset/8dfg/sequence/8dfg_H_VH.fa | sabdab_dataset/8dfg/sequence/8dfg_L_VL.fa | sabdab_dataset/8dfg/structure/8dfg.pdb | sabdab_dataset/8dfg/structure/chothia/8dfg.pdb | true | false | train |
8dfg | I | M | 0 | B | protein | null | merozoite surface protein 1 | STRUCTURAL PROTEIN/IMMUNE SYSTEM | 10/12/22 | Crystal structure of potently neutralizing human monoclonal antibody 42D6 Fab in complex with MSP1-19 | Homo sapiens; Plasmodium falciparum 3D7 | homo sapiens | homo sapiens | plasmodium falciparum 3d7 | Patel, P.N., Tang, W.K., Tolia, N.H. | 2 | X-RAY DIFFRACTION | 0.266 | 0.225 | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8dfg/abangle/8dfg.abangle | sabdab_dataset/8dfg/annotation/8dfg_I_VH.ann | sabdab_dataset/8dfg/annotation/8dfg_M_VL.ann | sabdab_dataset/8dfg/imgt/8dfg_I_H.ann | sabdab_dataset/8dfg/imgt/8dfg_M_L.ann | sabdab_dataset/8dfg/sequence/8dfg_raw.pdb | sabdab_dataset/8dfg/sequence/8dfg_I_VH.fa | sabdab_dataset/8dfg/sequence/8dfg_M_VL.fa | sabdab_dataset/8dfg/structure/8dfg.pdb | sabdab_dataset/8dfg/structure/chothia/8dfg.pdb | true | false | train |
8dfh | H | L | 0 | A | protein | null | merozoite surface protein 1 | STRUCTURAL PROTEIN/IMMUNE SYSTEM | 10/12/22 | Crystal structure of non-neutralizing / interfering human monoclonal antibody 42C3 Fab in complex with MSP1-19 | Homo sapiens; Plasmodium falciparum 3D7 | homo sapiens | homo sapiens | plasmodium falciparum 3d7 | Patel, P.N., Tang, W.K., Tolia, N.H. | 2.3 | X-RAY DIFFRACTION | 0.233 | 0.209 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dfh/abangle/8dfh.abangle | sabdab_dataset/8dfh/annotation/8dfh_H_VH.ann | sabdab_dataset/8dfh/annotation/8dfh_L_VL.ann | sabdab_dataset/8dfh/imgt/8dfh_H_H.ann | sabdab_dataset/8dfh/imgt/8dfh_L_L.ann | sabdab_dataset/8dfh/sequence/8dfh_raw.pdb | sabdab_dataset/8dfh/sequence/8dfh_H_VH.fa | sabdab_dataset/8dfh/sequence/8dfh_L_VL.fa | sabdab_dataset/8dfh/structure/8dfh.pdb | sabdab_dataset/8dfh/structure/chothia/8dfh.pdb | true | false | test |
8dfi | H | L | 0 | A | protein | null | merozoite surface protein 1 | STRUCTURAL PROTEIN/IMMUNE SYSTEM | 10/12/22 | Crystal structure of moderately neutralizing / interfering human monoclonal antibody 42C11 Fab in complex with MSP1-19 | Homo sapiens; Plasmodium falciparum 3D7 | homo sapiens | homo sapiens | plasmodium falciparum 3d7 | Patel, P.N., Tang, W.K., Tolia, N.H. | 1.9 | X-RAY DIFFRACTION | 0.200 | 0.175 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dfi/abangle/8dfi.abangle | sabdab_dataset/8dfi/annotation/8dfi_H_VH.ann | sabdab_dataset/8dfi/annotation/8dfi_L_VL.ann | sabdab_dataset/8dfi/imgt/8dfi_H_H.ann | sabdab_dataset/8dfi/imgt/8dfi_L_L.ann | sabdab_dataset/8dfi/sequence/8dfi_raw.pdb | sabdab_dataset/8dfi/sequence/8dfi_H_VH.fa | sabdab_dataset/8dfi/sequence/8dfi_L_VL.fa | sabdab_dataset/8dfi/structure/8dfi.pdb | sabdab_dataset/8dfi/structure/chothia/8dfi.pdb | true | false | train |
8dfl | E | null | 0 | A | protein | null | potassium voltage-gated channel subfamily a member 3,greenfluorescent protein fusion | IMMUNE SYSTEM | 07/13/22 | Structure of human Kv1.3 with A0194009G09 nanobodies (alternate conformation) | Aequorea victoria; Homo sapiens; Lama glama | lama glama | null | homo sapiens, aequorea victoria | Meyerson, J.R., Selvakumar, P. | 3.25 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8dfl/annotation/8dfl_E_VH.ann | null | sabdab_dataset/8dfl/imgt/8dfl_E_H.ann | null | sabdab_dataset/8dfl/sequence/8dfl_raw.pdb | sabdab_dataset/8dfl/sequence/8dfl_E_VH.fa | null | sabdab_dataset/8dfl/structure/8dfl.pdb | sabdab_dataset/8dfl/structure/chothia/8dfl.pdb | false | false | train |
8dfl | F | null | 0 | B | protein | null | potassium voltage-gated channel subfamily a member 3,greenfluorescent protein fusion | IMMUNE SYSTEM | 07/13/22 | Structure of human Kv1.3 with A0194009G09 nanobodies (alternate conformation) | Aequorea victoria; Homo sapiens; Lama glama | lama glama | null | homo sapiens, aequorea victoria | Meyerson, J.R., Selvakumar, P. | 3.25 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8dfl/annotation/8dfl_F_VH.ann | null | sabdab_dataset/8dfl/imgt/8dfl_F_H.ann | null | sabdab_dataset/8dfl/sequence/8dfl_raw.pdb | sabdab_dataset/8dfl/sequence/8dfl_F_VH.fa | null | sabdab_dataset/8dfl/structure/8dfl.pdb | sabdab_dataset/8dfl/structure/chothia/8dfl.pdb | false | false | train |
8dfl | G | null | 0 | C | protein | null | potassium voltage-gated channel subfamily a member 3,greenfluorescent protein fusion | IMMUNE SYSTEM | 07/13/22 | Structure of human Kv1.3 with A0194009G09 nanobodies (alternate conformation) | Aequorea victoria; Homo sapiens; Lama glama | lama glama | null | homo sapiens, aequorea victoria | Meyerson, J.R., Selvakumar, P. | 3.25 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8dfl/annotation/8dfl_G_VH.ann | null | sabdab_dataset/8dfl/imgt/8dfl_G_H.ann | null | sabdab_dataset/8dfl/sequence/8dfl_raw.pdb | sabdab_dataset/8dfl/sequence/8dfl_G_VH.fa | null | sabdab_dataset/8dfl/structure/8dfl.pdb | sabdab_dataset/8dfl/structure/chothia/8dfl.pdb | false | false | test |
8dfl | H | null | 0 | D | protein | null | potassium voltage-gated channel subfamily a member 3,greenfluorescent protein fusion | IMMUNE SYSTEM | 07/13/22 | Structure of human Kv1.3 with A0194009G09 nanobodies (alternate conformation) | Aequorea victoria; Homo sapiens; Lama glama | lama glama | null | homo sapiens, aequorea victoria | Meyerson, J.R., Selvakumar, P. | 3.25 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8dfl/annotation/8dfl_H_VH.ann | null | sabdab_dataset/8dfl/imgt/8dfl_H_H.ann | null | sabdab_dataset/8dfl/sequence/8dfl_raw.pdb | sabdab_dataset/8dfl/sequence/8dfl_H_VH.fa | null | sabdab_dataset/8dfl/structure/8dfl.pdb | sabdab_dataset/8dfl/structure/chothia/8dfl.pdb | false | false | train |
8dg8 | H | L | 0 | B | protein | null | fusion glycoprotein f0 | IMMUNE SYSTEM | 02/22/23 | Cryo-EM Structure of HPIV3 prefusion F trimer in complex with 3x1 Fab | Homo sapiens; Human parainfluenza 3 virus (strain NIH 47885) | homo sapiens | homo sapiens | human parainfluenza 3 virus (strain nih 47885) | Rodarte, J.V., Pancera, M. | 3.62 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8dg8/abangle/8dg8.abangle | sabdab_dataset/8dg8/annotation/8dg8_H_VH.ann | sabdab_dataset/8dg8/annotation/8dg8_L_VL.ann | sabdab_dataset/8dg8/imgt/8dg8_H_H.ann | sabdab_dataset/8dg8/imgt/8dg8_L_L.ann | sabdab_dataset/8dg8/sequence/8dg8_raw.pdb | sabdab_dataset/8dg8/sequence/8dg8_H_VH.fa | sabdab_dataset/8dg8/sequence/8dg8_L_VL.fa | sabdab_dataset/8dg8/structure/8dg8.pdb | sabdab_dataset/8dg8/structure/chothia/8dg8.pdb | false | false | train |
8dg9 | D | E | 0 | C | protein | null | fusion glycoprotein f0 | IMMUNE SYSTEM | 02/22/23 | Cryo-EM Structure of RSV prefusion F trimer in complex with three MxR Fabs | Homo sapiens; Respiratory syncytial virus A2 | homo sapiens | homo sapiens | respiratory syncytial virus a2 | Rodarte, J.V., Pancera, M. | 2.24 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dg9/abangle/8dg9.abangle | sabdab_dataset/8dg9/annotation/8dg9_D_VH.ann | sabdab_dataset/8dg9/annotation/8dg9_E_VL.ann | sabdab_dataset/8dg9/imgt/8dg9_D_H.ann | sabdab_dataset/8dg9/imgt/8dg9_E_L.ann | sabdab_dataset/8dg9/sequence/8dg9_raw.pdb | sabdab_dataset/8dg9/sequence/8dg9_D_VH.fa | sabdab_dataset/8dg9/sequence/8dg9_E_VL.fa | sabdab_dataset/8dg9/structure/8dg9.pdb | sabdab_dataset/8dg9/structure/chothia/8dg9.pdb | false | false | train |
8dg9 | F | G | 0 | B | protein | null | fusion glycoprotein f0 | IMMUNE SYSTEM | 02/22/23 | Cryo-EM Structure of RSV prefusion F trimer in complex with three MxR Fabs | Homo sapiens; Respiratory syncytial virus A2 | homo sapiens | homo sapiens | respiratory syncytial virus a2 | Rodarte, J.V., Pancera, M. | 2.24 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dg9/abangle/8dg9.abangle | sabdab_dataset/8dg9/annotation/8dg9_F_VH.ann | sabdab_dataset/8dg9/annotation/8dg9_G_VL.ann | sabdab_dataset/8dg9/imgt/8dg9_F_H.ann | sabdab_dataset/8dg9/imgt/8dg9_G_L.ann | sabdab_dataset/8dg9/sequence/8dg9_raw.pdb | sabdab_dataset/8dg9/sequence/8dg9_F_VH.fa | sabdab_dataset/8dg9/sequence/8dg9_G_VL.fa | sabdab_dataset/8dg9/structure/8dg9.pdb | sabdab_dataset/8dg9/structure/chothia/8dg9.pdb | false | false | train |
8dg9 | H | L | 0 | A | protein | null | fusion glycoprotein f0 | IMMUNE SYSTEM | 02/22/23 | Cryo-EM Structure of RSV prefusion F trimer in complex with three MxR Fabs | Homo sapiens; Respiratory syncytial virus A2 | homo sapiens | homo sapiens | respiratory syncytial virus a2 | Rodarte, J.V., Pancera, M. | 2.24 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dg9/abangle/8dg9.abangle | sabdab_dataset/8dg9/annotation/8dg9_H_VH.ann | sabdab_dataset/8dg9/annotation/8dg9_L_VL.ann | sabdab_dataset/8dg9/imgt/8dg9_H_H.ann | sabdab_dataset/8dg9/imgt/8dg9_L_L.ann | sabdab_dataset/8dg9/sequence/8dg9_raw.pdb | sabdab_dataset/8dg9/sequence/8dg9_H_VH.fa | sabdab_dataset/8dg9/sequence/8dg9_L_VL.fa | sabdab_dataset/8dg9/structure/8dg9.pdb | sabdab_dataset/8dg9/structure/chothia/8dg9.pdb | false | false | train |
8dgr | A | a | 0 | null | null | null | null | IMMUNE SYSTEM | 07/05/23 | Crystal Structure of scFv(F8) Antibody Fragment | Artichoke mottled crinkle virus | artichoke mottled crinkle virus | null | null | Mrozek, A., Park, H.W. | 1.56 | X-RAY DIFFRACTION | 0.195 | 0.175 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dgr/abangle/8dgr.abangle | sabdab_dataset/8dgr/annotation/8dgr_A_VH.ann | sabdab_dataset/8dgr/annotation/8dgr_A_VL.ann | sabdab_dataset/8dgr/imgt/8dgr_A_H.ann | sabdab_dataset/8dgr/imgt/8dgr_A_L.ann | sabdab_dataset/8dgr/sequence/8dgr_raw.pdb | sabdab_dataset/8dgr/sequence/8dgr_A_VH.fa | sabdab_dataset/8dgr/sequence/8dgr_A_VL.fa | sabdab_dataset/8dgr/structure/8dgr.pdb | sabdab_dataset/8dgr/structure/chothia/8dgr.pdb | true | false | validation |
8dgu | H | L | 0 | A | peptide | null | spike protein s2' | IMMUNE SYSTEM | 01/25/23 | Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC25.106 isolated from a vaccinated COVID-19 convalescent | Homo sapiens; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Liu, H., Wilson, I.A. | 1.89 | X-RAY DIFFRACTION | 0.245 | 0.214 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dgu/abangle/8dgu.abangle | sabdab_dataset/8dgu/annotation/8dgu_H_VH.ann | sabdab_dataset/8dgu/annotation/8dgu_L_VL.ann | sabdab_dataset/8dgu/imgt/8dgu_H_H.ann | sabdab_dataset/8dgu/imgt/8dgu_L_L.ann | sabdab_dataset/8dgu/sequence/8dgu_raw.pdb | sabdab_dataset/8dgu/sequence/8dgu_H_VH.fa | sabdab_dataset/8dgu/sequence/8dgu_L_VL.fa | sabdab_dataset/8dgu/structure/8dgu.pdb | sabdab_dataset/8dgu/structure/chothia/8dgu.pdb | true | false | validation |
8dgv | H | L | 0 | A | peptide | null | spike protein s2' | IMMUNE SYSTEM | 01/25/23 | Crystal structure of MERS-CoV spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC99.103 isolated from a vaccinated COVID-19 convalescent | Homo sapiens; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | middle east respiratory syndrome-relatedcoronavirus (isolate united kingdom/h123990006/2012) | Liu, H., Wilson, I.A. | 2.3 | X-RAY DIFFRACTION | 0.249 | 0.203 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8dgv/abangle/8dgv.abangle | sabdab_dataset/8dgv/annotation/8dgv_H_VH.ann | sabdab_dataset/8dgv/annotation/8dgv_L_VL.ann | sabdab_dataset/8dgv/imgt/8dgv_H_H.ann | sabdab_dataset/8dgv/imgt/8dgv_L_L.ann | sabdab_dataset/8dgv/sequence/8dgv_raw.pdb | sabdab_dataset/8dgv/sequence/8dgv_H_VH.fa | sabdab_dataset/8dgv/sequence/8dgv_L_VL.fa | sabdab_dataset/8dgv/structure/8dgv.pdb | sabdab_dataset/8dgv/structure/chothia/8dgv.pdb | true | false | train |
8dgw | A | B | 0 | I | peptide | null | spike protein s2' | IMMUNE SYSTEM | 01/25/23 | Crystal structure of HCoV-HKU1 spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC95.108 isolated from a vaccinated COVID-19 convalescent | Homo sapiens; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human coronavirus hku1 (isolate n1) | Liu, H., Wilson, I.A. | 2.81 | X-RAY DIFFRACTION | 0.248 | 0.217 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dgw/abangle/8dgw.abangle | sabdab_dataset/8dgw/annotation/8dgw_A_VH.ann | sabdab_dataset/8dgw/annotation/8dgw_B_VL.ann | sabdab_dataset/8dgw/imgt/8dgw_A_H.ann | sabdab_dataset/8dgw/imgt/8dgw_B_L.ann | sabdab_dataset/8dgw/sequence/8dgw_raw.pdb | sabdab_dataset/8dgw/sequence/8dgw_A_VH.fa | sabdab_dataset/8dgw/sequence/8dgw_B_VL.fa | sabdab_dataset/8dgw/structure/8dgw.pdb | sabdab_dataset/8dgw/structure/chothia/8dgw.pdb | true | false | train |
8dgw | C | D | 0 | J | peptide | null | spike protein s2' | IMMUNE SYSTEM | 01/25/23 | Crystal structure of HCoV-HKU1 spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC95.108 isolated from a vaccinated COVID-19 convalescent | Homo sapiens; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human coronavirus hku1 (isolate n1) | Liu, H., Wilson, I.A. | 2.81 | X-RAY DIFFRACTION | 0.248 | 0.217 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dgw/abangle/8dgw.abangle | sabdab_dataset/8dgw/annotation/8dgw_C_VH.ann | sabdab_dataset/8dgw/annotation/8dgw_D_VL.ann | sabdab_dataset/8dgw/imgt/8dgw_C_H.ann | sabdab_dataset/8dgw/imgt/8dgw_D_L.ann | sabdab_dataset/8dgw/sequence/8dgw_raw.pdb | sabdab_dataset/8dgw/sequence/8dgw_C_VH.fa | sabdab_dataset/8dgw/sequence/8dgw_D_VL.fa | sabdab_dataset/8dgw/structure/8dgw.pdb | sabdab_dataset/8dgw/structure/chothia/8dgw.pdb | true | false | train |
8dgw | E | F | 0 | K | peptide | null | spike protein s2' | IMMUNE SYSTEM | 01/25/23 | Crystal structure of HCoV-HKU1 spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC95.108 isolated from a vaccinated COVID-19 convalescent | Homo sapiens; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human coronavirus hku1 (isolate n1) | Liu, H., Wilson, I.A. | 2.81 | X-RAY DIFFRACTION | 0.248 | 0.217 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dgw/abangle/8dgw.abangle | sabdab_dataset/8dgw/annotation/8dgw_E_VH.ann | sabdab_dataset/8dgw/annotation/8dgw_F_VL.ann | sabdab_dataset/8dgw/imgt/8dgw_E_H.ann | sabdab_dataset/8dgw/imgt/8dgw_F_L.ann | sabdab_dataset/8dgw/sequence/8dgw_raw.pdb | sabdab_dataset/8dgw/sequence/8dgw_E_VH.fa | sabdab_dataset/8dgw/sequence/8dgw_F_VL.fa | sabdab_dataset/8dgw/structure/8dgw.pdb | sabdab_dataset/8dgw/structure/chothia/8dgw.pdb | true | false | train |
8dgw | H | L | 0 | G | peptide | null | spike protein s2' | IMMUNE SYSTEM | 01/25/23 | Crystal structure of HCoV-HKU1 spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC95.108 isolated from a vaccinated COVID-19 convalescent | Homo sapiens; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human coronavirus hku1 (isolate n1) | Liu, H., Wilson, I.A. | 2.81 | X-RAY DIFFRACTION | 0.248 | 0.217 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dgw/abangle/8dgw.abangle | sabdab_dataset/8dgw/annotation/8dgw_H_VH.ann | sabdab_dataset/8dgw/annotation/8dgw_L_VL.ann | sabdab_dataset/8dgw/imgt/8dgw_H_H.ann | sabdab_dataset/8dgw/imgt/8dgw_L_L.ann | sabdab_dataset/8dgw/sequence/8dgw_raw.pdb | sabdab_dataset/8dgw/sequence/8dgw_H_VH.fa | sabdab_dataset/8dgw/sequence/8dgw_L_VL.fa | sabdab_dataset/8dgw/structure/8dgw.pdb | sabdab_dataset/8dgw/structure/chothia/8dgw.pdb | true | false | train |
8dgx | A | B | 0 | D | peptide | null | spike protein s2' | IMMUNE SYSTEM | 01/25/23 | Crystal structure of MERS-CoV spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC68.109 isolated from a vaccinated COVID-19 convalescent | Homo sapiens; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | middle east respiratory syndrome-relatedcoronavirus (isolate united kingdom/h123990006/2012) | Liu, H., Wilson, I.A. | 2.89 | X-RAY DIFFRACTION | 0.280 | 0.233 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8dgx/abangle/8dgx.abangle | sabdab_dataset/8dgx/annotation/8dgx_A_VH.ann | sabdab_dataset/8dgx/annotation/8dgx_B_VL.ann | sabdab_dataset/8dgx/imgt/8dgx_A_H.ann | sabdab_dataset/8dgx/imgt/8dgx_B_L.ann | sabdab_dataset/8dgx/sequence/8dgx_raw.pdb | sabdab_dataset/8dgx/sequence/8dgx_A_VH.fa | sabdab_dataset/8dgx/sequence/8dgx_B_VL.fa | sabdab_dataset/8dgx/structure/8dgx.pdb | sabdab_dataset/8dgx/structure/chothia/8dgx.pdb | true | false | test |
8dgx | H | L | 0 | C | peptide | null | spike protein s2' | IMMUNE SYSTEM | 01/25/23 | Crystal structure of MERS-CoV spike stem helix peptide in complex with Fab of broadly neutralizing antibody CC68.109 isolated from a vaccinated COVID-19 convalescent | Homo sapiens; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | middle east respiratory syndrome-relatedcoronavirus (isolate united kingdom/h123990006/2012) | Liu, H., Wilson, I.A. | 2.89 | X-RAY DIFFRACTION | 0.280 | 0.233 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8dgx/abangle/8dgx.abangle | sabdab_dataset/8dgx/annotation/8dgx_H_VH.ann | sabdab_dataset/8dgx/annotation/8dgx_L_VL.ann | sabdab_dataset/8dgx/imgt/8dgx_H_H.ann | sabdab_dataset/8dgx/imgt/8dgx_L_L.ann | sabdab_dataset/8dgx/sequence/8dgx_raw.pdb | sabdab_dataset/8dgx/sequence/8dgx_H_VH.fa | sabdab_dataset/8dgx/sequence/8dgx_L_VL.fa | sabdab_dataset/8dgx/structure/8dgx.pdb | sabdab_dataset/8dgx/structure/chothia/8dgx.pdb | true | false | train |
8di5 | H | null | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 08/24/22 | Cryo-EM structure of SARS-CoV-2 Beta (B.1.351) spike protein in complex with VH domain F6 (focused refinement of RBD and VH F6) | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | null | severe acute respiratory syndrome coronavirus2 | Zhu, X., Saville, J.W., Mannar, D., Berezuk, A.M., Subramaniam, S. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null | null | sabdab_dataset/8di5/annotation/8di5_H_VH.ann | null | sabdab_dataset/8di5/imgt/8di5_H_H.ann | null | sabdab_dataset/8di5/sequence/8di5_raw.pdb | sabdab_dataset/8di5/sequence/8di5_H_VH.fa | null | sabdab_dataset/8di5/structure/8di5.pdb | sabdab_dataset/8di5/structure/chothia/8di5.pdb | false | false | train |
8dim | B | C | 0 | A | protein | null | hemagglutinin | VIRAL PROTEIN/IMMUNE SYSTEM | 11/16/22 | CryoEM structure of Influenza A virus A/Ohio/09/2015 hemagglutinin bound to CR6261 Fab | Homo sapiens; Influenza A virus | homo sapiens | homo sapiens | influenza a virus | Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dim/abangle/8dim.abangle | sabdab_dataset/8dim/annotation/8dim_B_VH.ann | sabdab_dataset/8dim/annotation/8dim_C_VL.ann | sabdab_dataset/8dim/imgt/8dim_B_H.ann | sabdab_dataset/8dim/imgt/8dim_C_L.ann | sabdab_dataset/8dim/sequence/8dim_raw.pdb | sabdab_dataset/8dim/sequence/8dim_B_VH.fa | sabdab_dataset/8dim/sequence/8dim_C_VL.fa | sabdab_dataset/8dim/structure/8dim.pdb | sabdab_dataset/8dim/structure/chothia/8dim.pdb | false | false | validation |
8dim | E | F | 0 | D | protein | null | hemagglutinin | VIRAL PROTEIN/IMMUNE SYSTEM | 11/16/22 | CryoEM structure of Influenza A virus A/Ohio/09/2015 hemagglutinin bound to CR6261 Fab | Homo sapiens; Influenza A virus | homo sapiens | homo sapiens | influenza a virus | Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dim/abangle/8dim.abangle | sabdab_dataset/8dim/annotation/8dim_E_VH.ann | sabdab_dataset/8dim/annotation/8dim_F_VL.ann | sabdab_dataset/8dim/imgt/8dim_E_H.ann | sabdab_dataset/8dim/imgt/8dim_F_L.ann | sabdab_dataset/8dim/sequence/8dim_raw.pdb | sabdab_dataset/8dim/sequence/8dim_E_VH.fa | sabdab_dataset/8dim/sequence/8dim_F_VL.fa | sabdab_dataset/8dim/structure/8dim.pdb | sabdab_dataset/8dim/structure/chothia/8dim.pdb | false | false | train |
8dim | H | I | 0 | G | protein | null | hemagglutinin | VIRAL PROTEIN/IMMUNE SYSTEM | 11/16/22 | CryoEM structure of Influenza A virus A/Ohio/09/2015 hemagglutinin bound to CR6261 Fab | Homo sapiens; Influenza A virus | homo sapiens | homo sapiens | influenza a virus | Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dim/abangle/8dim.abangle | sabdab_dataset/8dim/annotation/8dim_H_VH.ann | sabdab_dataset/8dim/annotation/8dim_I_VL.ann | sabdab_dataset/8dim/imgt/8dim_H_H.ann | sabdab_dataset/8dim/imgt/8dim_I_L.ann | sabdab_dataset/8dim/sequence/8dim_raw.pdb | sabdab_dataset/8dim/sequence/8dim_H_VH.fa | sabdab_dataset/8dim/sequence/8dim_I_VL.fa | sabdab_dataset/8dim/structure/8dim.pdb | sabdab_dataset/8dim/structure/chothia/8dim.pdb | false | false | train |
8dis | A | C | 0 | e | E | protein | protein | NA | NA | unknown | hemagglutinin ha2 chain | VIRAL PROTEIN/IMMUNE SYSTEM | 06/07/23 | CryoEM structure of Influenza A virus A/Melbourne/1/1946 (H1N1) hemagglutinin bound to CR6261 Fab | Homo sapiens; Influenza A virus | homo sapiens | homo sapiens | influenza a virus | influenza a virus | Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 2.62 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dis/abangle/8dis.abangle | sabdab_dataset/8dis/annotation/8dis_A_VH.ann | sabdab_dataset/8dis/annotation/8dis_C_VL.ann | sabdab_dataset/8dis/imgt/8dis_A_H.ann | sabdab_dataset/8dis/imgt/8dis_C_L.ann | sabdab_dataset/8dis/sequence/8dis_raw.pdb | sabdab_dataset/8dis/sequence/8dis_A_VH.fa | sabdab_dataset/8dis/sequence/8dis_C_VL.fa | sabdab_dataset/8dis/structure/8dis.pdb | sabdab_dataset/8dis/structure/chothia/8dis.pdb | false | false | train |
8dis | B | G | 0 | f | F | protein | protein | NA | NA | unknown | hemagglutinin ha2 chain | VIRAL PROTEIN/IMMUNE SYSTEM | 06/07/23 | CryoEM structure of Influenza A virus A/Melbourne/1/1946 (H1N1) hemagglutinin bound to CR6261 Fab | Homo sapiens; Influenza A virus | homo sapiens | homo sapiens | influenza a virus | influenza a virus | Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 2.62 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dis/abangle/8dis.abangle | sabdab_dataset/8dis/annotation/8dis_B_VH.ann | sabdab_dataset/8dis/annotation/8dis_G_VL.ann | sabdab_dataset/8dis/imgt/8dis_B_H.ann | sabdab_dataset/8dis/imgt/8dis_G_L.ann | sabdab_dataset/8dis/sequence/8dis_raw.pdb | sabdab_dataset/8dis/sequence/8dis_B_VH.fa | sabdab_dataset/8dis/sequence/8dis_G_VL.fa | sabdab_dataset/8dis/structure/8dis.pdb | sabdab_dataset/8dis/structure/chothia/8dis.pdb | false | false | test |
8dis | H | L | 0 | d | D | protein | protein | NA | NA | unknown | hemagglutinin ha2 chain | VIRAL PROTEIN/IMMUNE SYSTEM | 06/07/23 | CryoEM structure of Influenza A virus A/Melbourne/1/1946 (H1N1) hemagglutinin bound to CR6261 Fab | Homo sapiens; Influenza A virus | homo sapiens | homo sapiens | influenza a virus | influenza a virus | Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 2.62 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dis/abangle/8dis.abangle | sabdab_dataset/8dis/annotation/8dis_H_VH.ann | sabdab_dataset/8dis/annotation/8dis_L_VL.ann | sabdab_dataset/8dis/imgt/8dis_H_H.ann | sabdab_dataset/8dis/imgt/8dis_L_L.ann | sabdab_dataset/8dis/sequence/8dis_raw.pdb | sabdab_dataset/8dis/sequence/8dis_H_VH.fa | sabdab_dataset/8dis/sequence/8dis_L_VL.fa | sabdab_dataset/8dis/structure/8dis.pdb | sabdab_dataset/8dis/structure/chothia/8dis.pdb | false | false | train |
8diu | E | F | 0 | B | protein | null | hemagglutinin | VIRAL PROTEIN/IMMUNE SYSTEM | 12/14/22 | Cryo-EM structure of influenza A virus A/Bayern/7/1995 hemagglutinin bound to CR6261 Fab | Homo sapiens; Influenza A virus | homo sapiens | homo sapiens | influenza a virus | Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8diu/abangle/8diu.abangle | sabdab_dataset/8diu/annotation/8diu_E_VH.ann | sabdab_dataset/8diu/annotation/8diu_F_VL.ann | sabdab_dataset/8diu/imgt/8diu_E_H.ann | sabdab_dataset/8diu/imgt/8diu_F_L.ann | sabdab_dataset/8diu/sequence/8diu_raw.pdb | sabdab_dataset/8diu/sequence/8diu_E_VH.fa | sabdab_dataset/8diu/sequence/8diu_F_VL.fa | sabdab_dataset/8diu/structure/8diu.pdb | sabdab_dataset/8diu/structure/chothia/8diu.pdb | false | false | train |
8diu | G | C | 0 | D | protein | null | hemagglutinin | VIRAL PROTEIN/IMMUNE SYSTEM | 12/14/22 | Cryo-EM structure of influenza A virus A/Bayern/7/1995 hemagglutinin bound to CR6261 Fab | Homo sapiens; Influenza A virus | homo sapiens | homo sapiens | influenza a virus | Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8diu/abangle/8diu.abangle | sabdab_dataset/8diu/annotation/8diu_G_VH.ann | sabdab_dataset/8diu/annotation/8diu_C_VL.ann | sabdab_dataset/8diu/imgt/8diu_G_H.ann | sabdab_dataset/8diu/imgt/8diu_C_L.ann | sabdab_dataset/8diu/sequence/8diu_raw.pdb | sabdab_dataset/8diu/sequence/8diu_G_VH.fa | sabdab_dataset/8diu/sequence/8diu_C_VL.fa | sabdab_dataset/8diu/structure/8diu.pdb | sabdab_dataset/8diu/structure/chothia/8diu.pdb | false | false | train |
8diu | H | I | 0 | A | protein | null | hemagglutinin | VIRAL PROTEIN/IMMUNE SYSTEM | 12/14/22 | Cryo-EM structure of influenza A virus A/Bayern/7/1995 hemagglutinin bound to CR6261 Fab | Homo sapiens; Influenza A virus | homo sapiens | homo sapiens | influenza a virus | Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8diu/abangle/8diu.abangle | sabdab_dataset/8diu/annotation/8diu_H_VH.ann | sabdab_dataset/8diu/annotation/8diu_I_VL.ann | sabdab_dataset/8diu/imgt/8diu_H_H.ann | sabdab_dataset/8diu/imgt/8diu_I_L.ann | sabdab_dataset/8diu/sequence/8diu_raw.pdb | sabdab_dataset/8diu/sequence/8diu_H_VH.fa | sabdab_dataset/8diu/sequence/8diu_I_VL.fa | sabdab_dataset/8diu/structure/8diu.pdb | sabdab_dataset/8diu/structure/chothia/8diu.pdb | false | false | test |
8djg | A | B | 0 | F | protein | null | isoform 2 of adhesion g protein-coupled receptor l3 | SIGNALING PROTEIN/Immune System | 02/15/23 | ADGRL3-lectin domain in complex with an activating synthetic antibody fragment | Homo sapiens; synthetic construct | synthetic construct | synthetic construct | homo sapiens | Kordon, S.P., Bandekar, S.J., Arac, D. | 2.65 | X-RAY DIFFRACTION | 0.274 | 0.237 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8djg/abangle/8djg.abangle | sabdab_dataset/8djg/annotation/8djg_A_VH.ann | sabdab_dataset/8djg/annotation/8djg_B_VL.ann | sabdab_dataset/8djg/imgt/8djg_A_H.ann | sabdab_dataset/8djg/imgt/8djg_B_L.ann | sabdab_dataset/8djg/sequence/8djg_raw.pdb | sabdab_dataset/8djg/sequence/8djg_A_VH.fa | sabdab_dataset/8djg/sequence/8djg_B_VL.fa | sabdab_dataset/8djg/structure/8djg.pdb | sabdab_dataset/8djg/structure/chothia/8djg.pdb | false | false | train |
8djg | C | D | 0 | E | protein | null | isoform 2 of adhesion g protein-coupled receptor l3 | SIGNALING PROTEIN/Immune System | 02/15/23 | ADGRL3-lectin domain in complex with an activating synthetic antibody fragment | Homo sapiens; synthetic construct | synthetic construct | synthetic construct | homo sapiens | Kordon, S.P., Bandekar, S.J., Arac, D. | 2.65 | X-RAY DIFFRACTION | 0.274 | 0.237 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8djg/abangle/8djg.abangle | sabdab_dataset/8djg/annotation/8djg_C_VH.ann | sabdab_dataset/8djg/annotation/8djg_D_VL.ann | sabdab_dataset/8djg/imgt/8djg_C_H.ann | sabdab_dataset/8djg/imgt/8djg_D_L.ann | sabdab_dataset/8djg/sequence/8djg_raw.pdb | sabdab_dataset/8djg/sequence/8djg_C_VH.fa | sabdab_dataset/8djg/sequence/8djg_D_VL.fa | sabdab_dataset/8djg/structure/8djg.pdb | sabdab_dataset/8djg/structure/chothia/8djg.pdb | false | false | train |
8djk | H | L | 0 | B | A | protein | protein | NA | NA | ubia prenyltransferase domain-containing protein 1 | 3-hydroxy-3-methylglutaryl-coenzyme a reductase | Oxidoreductase/Immune System | 08/03/22 | HMGCR-UBIAD1 Complex State 2 | Cricetulus griseus; Escherichia coli; Mus musculus | mus musculus | mus musculus | cricetulus griseus | cricetulus griseus | Chen, H., Qi, X., Li, X. | 3.33 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV5 | Kappa | null | null | null | null | null | sabdab_dataset/8djk/abangle/8djk.abangle | sabdab_dataset/8djk/annotation/8djk_H_VH.ann | sabdab_dataset/8djk/annotation/8djk_L_VL.ann | sabdab_dataset/8djk/imgt/8djk_H_H.ann | sabdab_dataset/8djk/imgt/8djk_L_L.ann | sabdab_dataset/8djk/sequence/8djk_raw.pdb | sabdab_dataset/8djk/sequence/8djk_H_VH.fa | sabdab_dataset/8djk/sequence/8djk_L_VL.fa | sabdab_dataset/8djk/structure/8djk.pdb | sabdab_dataset/8djk/structure/chothia/8djk.pdb | false | false | train |
8djm | H | L | 0 | B | A | protein | protein | NA | NA | ubia prenyltransferase domain-containing protein 1 | 3-hydroxy-3-methylglutaryl-coenzyme a reductase | Oxidoreductase/Immune System | 08/03/22 | HMGCR-UBIAD1 Complex State 1 | Cricetulus griseus; Escherichia coli; Mus musculus | mus musculus | mus musculus | cricetulus griseus | cricetulus griseus | Chen, H., Qi, X., Li, X. | 3.23 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV5 | Kappa | null | null | null | null | null | sabdab_dataset/8djm/abangle/8djm.abangle | sabdab_dataset/8djm/annotation/8djm_H_VH.ann | sabdab_dataset/8djm/annotation/8djm_L_VL.ann | sabdab_dataset/8djm/imgt/8djm_H_H.ann | sabdab_dataset/8djm/imgt/8djm_L_L.ann | sabdab_dataset/8djm/sequence/8djm_raw.pdb | sabdab_dataset/8djm/sequence/8djm_H_VH.fa | sabdab_dataset/8djm/sequence/8djm_L_VL.fa | sabdab_dataset/8djm/structure/8djm.pdb | sabdab_dataset/8djm/structure/chothia/8djm.pdb | false | false | train |
8dk5 | K | k | 0 | G | F | E | H | protein | protein | protein | protein | NA | NA | NA | NA | histone h2a type 2-c | histone h4 | histone h3.1 | histone h2b type 2-e | TRANSCRIPTION/DNA | 06/28/23 | Structure of 187bp LIN28b nucleosome with site 0 mutation | Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT | mus musculus | null | homo sapiens | homo sapiens | homo sapiens | homo sapiens | Lian, T., Guan, R., Bai, Y. | 2.71 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dk5/abangle/8dk5.abangle | sabdab_dataset/8dk5/annotation/8dk5_K_VH.ann | sabdab_dataset/8dk5/annotation/8dk5_K_VL.ann | sabdab_dataset/8dk5/imgt/8dk5_K_H.ann | sabdab_dataset/8dk5/imgt/8dk5_K_L.ann | sabdab_dataset/8dk5/sequence/8dk5_raw.pdb | sabdab_dataset/8dk5/sequence/8dk5_K_VH.fa | sabdab_dataset/8dk5/sequence/8dk5_K_VL.fa | sabdab_dataset/8dk5/structure/8dk5.pdb | sabdab_dataset/8dk5/structure/chothia/8dk5.pdb | false | false | train |
8dk5 | N | n | 0 | C | B | D | protein | protein | protein | NA | NA | NA | histone h2a type 2-c | histone h4 | histone h2b type 2-e | TRANSCRIPTION/DNA | 06/28/23 | Structure of 187bp LIN28b nucleosome with site 0 mutation | Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT | mus musculus | null | homo sapiens | homo sapiens | homo sapiens | Lian, T., Guan, R., Bai, Y. | 2.71 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dk5/abangle/8dk5.abangle | sabdab_dataset/8dk5/annotation/8dk5_N_VH.ann | sabdab_dataset/8dk5/annotation/8dk5_N_VL.ann | sabdab_dataset/8dk5/imgt/8dk5_N_H.ann | sabdab_dataset/8dk5/imgt/8dk5_N_L.ann | sabdab_dataset/8dk5/sequence/8dk5_raw.pdb | sabdab_dataset/8dk5/sequence/8dk5_N_VH.fa | sabdab_dataset/8dk5/sequence/8dk5_N_VL.fa | sabdab_dataset/8dk5/structure/8dk5.pdb | sabdab_dataset/8dk5/structure/chothia/8dk5.pdb | false | false | train |
8dk6 | H | L | 0 | E | protein | null | envelope glycoprotein e2 | VIRAL PROTEIN | 03/29/23 | Structure of hepatitis C virus envelope N-terminal truncated glycoprotein 2 (E2) (residues 456-713) from J6 genotype | Hepacivirus C; Mus musculus | mus musculus | mus musculus | hepacivirus c | Kumar, A., Rohe, T., Elrod, E.J., Khan, A.G., Dearborn, A.D., Kissinger, R., Grakoui, A., Marcotrigiano, J. | 2.45 | X-RAY DIFFRACTION | 0.232 | 0.203 | false | true | IGHV14 | IGKV8 | Kappa | null | null | null | null | null | sabdab_dataset/8dk6/abangle/8dk6.abangle | sabdab_dataset/8dk6/annotation/8dk6_H_VH.ann | sabdab_dataset/8dk6/annotation/8dk6_L_VL.ann | sabdab_dataset/8dk6/imgt/8dk6_H_H.ann | sabdab_dataset/8dk6/imgt/8dk6_L_L.ann | sabdab_dataset/8dk6/sequence/8dk6_raw.pdb | sabdab_dataset/8dk6/sequence/8dk6_H_VH.fa | sabdab_dataset/8dk6/sequence/8dk6_L_VL.fa | sabdab_dataset/8dk6/structure/8dk6.pdb | sabdab_dataset/8dk6/structure/chothia/8dk6.pdb | true | false | test |
8dk7 | B | A | 0 | C | nucleic-acid | null | rna (34-mer) | RNA/IMMUNE SYSTEM | 11/30/22 | Crystal structure of theophylline aptamer soaked with TAL2 | Homo sapiens; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | synthetic construct | Menichelli, E., Spraggon, G. | 2.46 | X-RAY DIFFRACTION | 0.270 | 0.246 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dk7/abangle/8dk7.abangle | sabdab_dataset/8dk7/annotation/8dk7_B_VH.ann | sabdab_dataset/8dk7/annotation/8dk7_A_VL.ann | sabdab_dataset/8dk7/imgt/8dk7_B_H.ann | sabdab_dataset/8dk7/imgt/8dk7_A_L.ann | sabdab_dataset/8dk7/sequence/8dk7_raw.pdb | sabdab_dataset/8dk7/sequence/8dk7_B_VH.fa | sabdab_dataset/8dk7/sequence/8dk7_A_VL.fa | sabdab_dataset/8dk7/structure/8dk7.pdb | sabdab_dataset/8dk7/structure/chothia/8dk7.pdb | false | false | train |
8dk7 | D | E | 0 | F | nucleic-acid | null | rna (34-mer) | RNA/IMMUNE SYSTEM | 11/30/22 | Crystal structure of theophylline aptamer soaked with TAL2 | Homo sapiens; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | synthetic construct | Menichelli, E., Spraggon, G. | 2.46 | X-RAY DIFFRACTION | 0.270 | 0.246 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dk7/abangle/8dk7.abangle | sabdab_dataset/8dk7/annotation/8dk7_D_VH.ann | sabdab_dataset/8dk7/annotation/8dk7_E_VL.ann | sabdab_dataset/8dk7/imgt/8dk7_D_H.ann | sabdab_dataset/8dk7/imgt/8dk7_E_L.ann | sabdab_dataset/8dk7/sequence/8dk7_raw.pdb | sabdab_dataset/8dk7/sequence/8dk7_D_VH.fa | sabdab_dataset/8dk7/sequence/8dk7_E_VL.fa | sabdab_dataset/8dk7/structure/8dk7.pdb | sabdab_dataset/8dk7/structure/chothia/8dk7.pdb | false | false | train |
8dke | A | B | 0 | P | protein | null | isoform 2 of cystinosin | MEMBRANE PROTEIN/Transport protein | 09/21/22 | Cryo-EM structure of cystinosin in a cytosol-open state | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Schmiege, P., Li, X. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV15 | Kappa | null | null | null | null | null | sabdab_dataset/8dke/abangle/8dke.abangle | sabdab_dataset/8dke/annotation/8dke_A_VH.ann | sabdab_dataset/8dke/annotation/8dke_B_VL.ann | sabdab_dataset/8dke/imgt/8dke_A_H.ann | sabdab_dataset/8dke/imgt/8dke_B_L.ann | sabdab_dataset/8dke/sequence/8dke_raw.pdb | sabdab_dataset/8dke/sequence/8dke_A_VH.fa | sabdab_dataset/8dke/sequence/8dke_B_VL.fa | sabdab_dataset/8dke/structure/8dke.pdb | sabdab_dataset/8dke/structure/chothia/8dke.pdb | false | false | train |
8dkf | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 07/12/23 | Antibody DH1030.1 Fab fragment | Homo sapiens | homo sapiens | homo sapiens | null | Gobeil, S., Acharya, P. | 1.79 | X-RAY DIFFRACTION | 0.274 | 0.239 | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8dkf/abangle/8dkf.abangle | sabdab_dataset/8dkf/annotation/8dkf_A_VH.ann | sabdab_dataset/8dkf/annotation/8dkf_B_VL.ann | sabdab_dataset/8dkf/imgt/8dkf_A_H.ann | sabdab_dataset/8dkf/imgt/8dkf_B_L.ann | sabdab_dataset/8dkf/sequence/8dkf_raw.pdb | sabdab_dataset/8dkf/sequence/8dkf_A_VH.fa | sabdab_dataset/8dkf/sequence/8dkf_B_VL.fa | sabdab_dataset/8dkf/structure/8dkf.pdb | sabdab_dataset/8dkf/structure/chothia/8dkf.pdb | true | false | train |
8dkf | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 07/12/23 | Antibody DH1030.1 Fab fragment | Homo sapiens | homo sapiens | homo sapiens | null | Gobeil, S., Acharya, P. | 1.79 | X-RAY DIFFRACTION | 0.274 | 0.239 | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8dkf/abangle/8dkf.abangle | sabdab_dataset/8dkf/annotation/8dkf_H_VH.ann | sabdab_dataset/8dkf/annotation/8dkf_L_VL.ann | sabdab_dataset/8dkf/imgt/8dkf_H_H.ann | sabdab_dataset/8dkf/imgt/8dkf_L_L.ann | sabdab_dataset/8dkf/sequence/8dkf_raw.pdb | sabdab_dataset/8dkf/sequence/8dkf_H_VH.fa | sabdab_dataset/8dkf/sequence/8dkf_L_VL.fa | sabdab_dataset/8dkf/structure/8dkf.pdb | sabdab_dataset/8dkf/structure/chothia/8dkf.pdb | true | false | train |
8dki | A | B | 0 | P | protein | null | isoform 2 of cystinosin | MEMBRANE PROTEIN/Transport protein | 09/21/22 | Cryo-EM structure of cystinosin in a lumen-open state | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Schmiege, P., Li, X. | 3.32 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV15 | Kappa | null | null | null | null | null | sabdab_dataset/8dki/abangle/8dki.abangle | sabdab_dataset/8dki/annotation/8dki_A_VH.ann | sabdab_dataset/8dki/annotation/8dki_B_VL.ann | sabdab_dataset/8dki/imgt/8dki_A_H.ann | sabdab_dataset/8dki/imgt/8dki_B_L.ann | sabdab_dataset/8dki/sequence/8dki_raw.pdb | sabdab_dataset/8dki/sequence/8dki_A_VH.fa | sabdab_dataset/8dki/sequence/8dki_B_VL.fa | sabdab_dataset/8dki/structure/8dki.pdb | sabdab_dataset/8dki/structure/chothia/8dki.pdb | false | false | train |
8dkm | A | B | 0 | P | protein | null | isoform 2 of cystinosin | MEMBRANE PROTEIN/Transport protein | 09/21/22 | Cryo-EM structure of cystine-bound cystinosin in a lumen-open state | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Schmiege, P., Li, X. | 3.39 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV15 | Kappa | null | null | null | null | null | sabdab_dataset/8dkm/abangle/8dkm.abangle | sabdab_dataset/8dkm/annotation/8dkm_A_VH.ann | sabdab_dataset/8dkm/annotation/8dkm_B_VL.ann | sabdab_dataset/8dkm/imgt/8dkm_A_H.ann | sabdab_dataset/8dkm/imgt/8dkm_B_L.ann | sabdab_dataset/8dkm/sequence/8dkm_raw.pdb | sabdab_dataset/8dkm/sequence/8dkm_A_VH.fa | sabdab_dataset/8dkm/sequence/8dkm_B_VL.fa | sabdab_dataset/8dkm/structure/8dkm.pdb | sabdab_dataset/8dkm/structure/chothia/8dkm.pdb | false | false | test |
8dkw | A | B | 0 | P | protein | null | isoform 2 of cystinosin | MEMBRANE PROTEIN/Transport protein | 09/21/22 | Cryo-EM structure of cystinosin N288K mutant in a cytosol-open state at pH5.0 | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Schmiege, P., Li, X. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV15 | Kappa | null | null | null | null | null | sabdab_dataset/8dkw/abangle/8dkw.abangle | sabdab_dataset/8dkw/annotation/8dkw_A_VH.ann | sabdab_dataset/8dkw/annotation/8dkw_B_VL.ann | sabdab_dataset/8dkw/imgt/8dkw_A_H.ann | sabdab_dataset/8dkw/imgt/8dkw_B_L.ann | sabdab_dataset/8dkw/sequence/8dkw_raw.pdb | sabdab_dataset/8dkw/sequence/8dkw_A_VH.fa | sabdab_dataset/8dkw/sequence/8dkw_B_VL.fa | sabdab_dataset/8dkw/structure/8dkw.pdb | sabdab_dataset/8dkw/structure/chothia/8dkw.pdb | false | false | validation |
8dkx | A | B | 0 | P | protein | null | isoform 2 of cystinosin | MEMBRANE PROTEIN/Transport protein | 09/21/22 | Cryo-EM structure of cystinosin N288K mutant in a cytosol-open state at pH7.5 | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Schmiege, P., Li, X. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV15 | Kappa | null | null | null | null | null | sabdab_dataset/8dkx/abangle/8dkx.abangle | sabdab_dataset/8dkx/annotation/8dkx_A_VH.ann | sabdab_dataset/8dkx/annotation/8dkx_B_VL.ann | sabdab_dataset/8dkx/imgt/8dkx_A_H.ann | sabdab_dataset/8dkx/imgt/8dkx_B_L.ann | sabdab_dataset/8dkx/sequence/8dkx_raw.pdb | sabdab_dataset/8dkx/sequence/8dkx_A_VH.fa | sabdab_dataset/8dkx/sequence/8dkx_B_VL.fa | sabdab_dataset/8dkx/structure/8dkx.pdb | sabdab_dataset/8dkx/structure/chothia/8dkx.pdb | false | false | train |
8dl6 | D | C | 0 | A | protein | null | solute carrier family 40 member 1 | MEMBRANE PROTEIN | 01/25/23 | Cryo-EM structure of human ferroportin/slc40 bound to Ca2+ in nanodisc | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Shen, J., Wilbon, A.S., Pan, Y., Zhou, M. | 0 | ELECTRON MICROSCOPY | null | null | false | false | IGHV14 | IGKV6 | Kappa | null | null | null | null | null | sabdab_dataset/8dl6/abangle/8dl6.abangle | sabdab_dataset/8dl6/annotation/8dl6_D_VH.ann | sabdab_dataset/8dl6/annotation/8dl6_C_VL.ann | sabdab_dataset/8dl6/imgt/8dl6_D_H.ann | sabdab_dataset/8dl6/imgt/8dl6_C_L.ann | sabdab_dataset/8dl6/sequence/8dl6_raw.pdb | sabdab_dataset/8dl6/sequence/8dl6_D_VH.fa | sabdab_dataset/8dl6/sequence/8dl6_C_VL.fa | sabdab_dataset/8dl6/structure/8dl6.pdb | sabdab_dataset/8dl6/structure/chothia/8dl6.pdb | false | false | train |
8dl7 | D | C | 0 | A | protein | null | solute carrier family 40 member 1 | MEMBRANE PROTEIN | 12/07/22 | Cryo-EM structure of human ferroportin/slc40 bound to minihepcidin PR73 in nanodisc | Homo sapiens; Mus musculus; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Shen, J., Wilbon, A.S., Pan, Y., Zhou, M. | 0 | ELECTRON MICROSCOPY | null | null | false | false | IGHV14 | IGKV6 | Kappa | null | null | null | null | null | sabdab_dataset/8dl7/abangle/8dl7.abangle | sabdab_dataset/8dl7/annotation/8dl7_D_VH.ann | sabdab_dataset/8dl7/annotation/8dl7_C_VL.ann | sabdab_dataset/8dl7/imgt/8dl7_D_H.ann | sabdab_dataset/8dl7/imgt/8dl7_C_L.ann | sabdab_dataset/8dl7/sequence/8dl7_raw.pdb | sabdab_dataset/8dl7/sequence/8dl7_D_VH.fa | sabdab_dataset/8dl7/sequence/8dl7_C_VL.fa | sabdab_dataset/8dl7/structure/8dl7.pdb | sabdab_dataset/8dl7/structure/chothia/8dl7.pdb | false | false | test |
8dl8 | D | C | 0 | A | protein | null | solute carrier family 40 member 1 | MEMBRANE PROTEIN | 12/07/22 | Cryo-EM structure of human ferroportin/slc40 bound to Co2+ in nanodisc | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Shen, J., Wilbon, A.S., Pan, Y., Zhou, M. | 0 | ELECTRON MICROSCOPY | null | null | false | false | IGHV14 | IGKV6 | Kappa | null | null | null | null | null | sabdab_dataset/8dl8/abangle/8dl8.abangle | sabdab_dataset/8dl8/annotation/8dl8_D_VH.ann | sabdab_dataset/8dl8/annotation/8dl8_C_VL.ann | sabdab_dataset/8dl8/imgt/8dl8_D_H.ann | sabdab_dataset/8dl8/imgt/8dl8_C_L.ann | sabdab_dataset/8dl8/sequence/8dl8_raw.pdb | sabdab_dataset/8dl8/sequence/8dl8_D_VH.fa | sabdab_dataset/8dl8/sequence/8dl8_C_VL.fa | sabdab_dataset/8dl8/structure/8dl8.pdb | sabdab_dataset/8dl8/structure/chothia/8dl8.pdb | false | false | train |
8dlr | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 08/31/22 | Cryo-EM structure of SARS-CoV-2 Gamma (P.1) spike protein in complex with Fab 4-8 (focused refinement of NTD and 4-8) | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhu, X., Mannar, D., Saville, J.W., Srivastava, S.S., Berezuk, A.M., Zhou, S., Tuttle, K.S., Subramaniam, S. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8dlr/abangle/8dlr.abangle | sabdab_dataset/8dlr/annotation/8dlr_H_VH.ann | sabdab_dataset/8dlr/annotation/8dlr_L_VL.ann | sabdab_dataset/8dlr/imgt/8dlr_H_H.ann | sabdab_dataset/8dlr/imgt/8dlr_L_L.ann | sabdab_dataset/8dlr/sequence/8dlr_raw.pdb | sabdab_dataset/8dlr/sequence/8dlr_H_VH.fa | sabdab_dataset/8dlr/sequence/8dlr_L_VL.fa | sabdab_dataset/8dlr/structure/8dlr.pdb | sabdab_dataset/8dlr/structure/chothia/8dlr.pdb | false | false | train |
8dls | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 08/31/22 | Cryo-EM structure of SARS-CoV-2 Gamma (P.1) spike protein in complex with Fab 4A8 (focused refinement of NTD and 4A8) | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhu, X., Mannar, D., Saville, J.W., Srivastava, S.S., Berezuk, A.M., Zhou, S., Tuttle, K.S., Subramaniam, S. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8dls/abangle/8dls.abangle | sabdab_dataset/8dls/annotation/8dls_H_VH.ann | sabdab_dataset/8dls/annotation/8dls_L_VL.ann | sabdab_dataset/8dls/imgt/8dls_H_H.ann | sabdab_dataset/8dls/imgt/8dls_L_L.ann | sabdab_dataset/8dls/sequence/8dls_raw.pdb | sabdab_dataset/8dls/sequence/8dls_H_VH.fa | sabdab_dataset/8dls/sequence/8dls_L_VL.fa | sabdab_dataset/8dls/structure/8dls.pdb | sabdab_dataset/8dls/structure/chothia/8dls.pdb | false | false | test |
8dlw | C | D | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN | 08/31/22 | Cryo-EM structure of SARS-CoV-2 Epsilon (B.1.429) spike protein in complex with Fab S2M11 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhu, X., Mannar, D., Saville, J.W., Srivastava, S.S., Berezuk, A.M., Zhou, S., Tuttle, K.S., Subramaniam, S. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8dlw/abangle/8dlw.abangle | sabdab_dataset/8dlw/annotation/8dlw_C_VH.ann | sabdab_dataset/8dlw/annotation/8dlw_D_VL.ann | sabdab_dataset/8dlw/imgt/8dlw_C_H.ann | sabdab_dataset/8dlw/imgt/8dlw_D_L.ann | sabdab_dataset/8dlw/sequence/8dlw_raw.pdb | sabdab_dataset/8dlw/sequence/8dlw_C_VH.fa | sabdab_dataset/8dlw/sequence/8dlw_D_VL.fa | sabdab_dataset/8dlw/structure/8dlw.pdb | sabdab_dataset/8dlw/structure/chothia/8dlw.pdb | false | false | train |
8dlw | F | G | 0 | E | protein | null | spike glycoprotein | VIRAL PROTEIN | 08/31/22 | Cryo-EM structure of SARS-CoV-2 Epsilon (B.1.429) spike protein in complex with Fab S2M11 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhu, X., Mannar, D., Saville, J.W., Srivastava, S.S., Berezuk, A.M., Zhou, S., Tuttle, K.S., Subramaniam, S. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8dlw/abangle/8dlw.abangle | sabdab_dataset/8dlw/annotation/8dlw_F_VH.ann | sabdab_dataset/8dlw/annotation/8dlw_G_VL.ann | sabdab_dataset/8dlw/imgt/8dlw_F_H.ann | sabdab_dataset/8dlw/imgt/8dlw_G_L.ann | sabdab_dataset/8dlw/sequence/8dlw_raw.pdb | sabdab_dataset/8dlw/sequence/8dlw_F_VH.fa | sabdab_dataset/8dlw/sequence/8dlw_G_VL.fa | sabdab_dataset/8dlw/structure/8dlw.pdb | sabdab_dataset/8dlw/structure/chothia/8dlw.pdb | false | false | train |
8dlw | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 08/31/22 | Cryo-EM structure of SARS-CoV-2 Epsilon (B.1.429) spike protein in complex with Fab S2M11 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhu, X., Mannar, D., Saville, J.W., Srivastava, S.S., Berezuk, A.M., Zhou, S., Tuttle, K.S., Subramaniam, S. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8dlw/abangle/8dlw.abangle | sabdab_dataset/8dlw/annotation/8dlw_H_VH.ann | sabdab_dataset/8dlw/annotation/8dlw_L_VL.ann | sabdab_dataset/8dlw/imgt/8dlw_H_H.ann | sabdab_dataset/8dlw/imgt/8dlw_L_L.ann | sabdab_dataset/8dlw/sequence/8dlw_raw.pdb | sabdab_dataset/8dlw/sequence/8dlw_H_VH.fa | sabdab_dataset/8dlw/sequence/8dlw_L_VL.fa | sabdab_dataset/8dlw/structure/8dlw.pdb | sabdab_dataset/8dlw/structure/chothia/8dlw.pdb | false | false | train |
8dlx | H | null | 0 | C | A | protein | protein | NA | NA | spike glycoprotein | spike glycoprotein | VIRAL PROTEIN | 01/08/09 | Cryo-EM structure of SARS-CoV-2 Epsilon (B.1.429) spike protein in complex with VH ab6 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | null | severe acute respiratory syndrome coronavirus2 | severe acute respiratory syndrome coronavirus2 | Zhu, X., Mannar, D., Saville, J.W., Srivastava, S.S., Berezuk, A.M., Zhou, S., Tuttle, K.S., Subramaniam, S. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null | null | sabdab_dataset/8dlx/annotation/8dlx_H_VH.ann | null | sabdab_dataset/8dlx/imgt/8dlx_H_H.ann | null | sabdab_dataset/8dlx/sequence/8dlx_raw.pdb | sabdab_dataset/8dlx/sequence/8dlx_H_VH.fa | null | sabdab_dataset/8dlx/structure/8dlx.pdb | sabdab_dataset/8dlx/structure/chothia/8dlx.pdb | false | false | train |
8dly | H | null | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 08/31/22 | Cryo-EM structure of SARS-CoV-2 Epsilon (B.1.429) spike protein in complex with VH ab6 (focused refinement of NTD and VH ab6) | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | null | severe acute respiratory syndrome coronavirus2 | Zhu, X., Mannar, D., Saville, J.W., Srivastava, S.S., Berezuk, A.M., Zhou, S., Tuttle, K.S., Subramaniam, S. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null | null | sabdab_dataset/8dly/annotation/8dly_H_VH.ann | null | sabdab_dataset/8dly/imgt/8dly_H_H.ann | null | sabdab_dataset/8dly/sequence/8dly_raw.pdb | sabdab_dataset/8dly/sequence/8dly_H_VH.fa | null | sabdab_dataset/8dly/structure/8dly.pdb | sabdab_dataset/8dly/structure/chothia/8dly.pdb | false | false | train |
8dlz | H | null | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 01/08/09 | Cryo-EM structure of SARS-CoV-2 D614G spike protein in complex with VH ab6 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | null | severe acute respiratory syndrome coronavirus2 | Zhu, X., Mannar, D., Saville, J.W., Srivastava, S.S., Berezuk, A.M., Zhou, S., Tuttle, K.S., Subramaniam, S. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null | null | sabdab_dataset/8dlz/annotation/8dlz_H_VH.ann | null | sabdab_dataset/8dlz/imgt/8dlz_H_H.ann | null | sabdab_dataset/8dlz/sequence/8dlz_raw.pdb | sabdab_dataset/8dlz/sequence/8dlz_H_VH.fa | null | sabdab_dataset/8dlz/structure/8dlz.pdb | sabdab_dataset/8dlz/structure/chothia/8dlz.pdb | false | false | train |
8dm0 | H | null | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 08/31/22 | Cryo-EM structure of SARS-CoV-2 D614G spike protein in complex with VH ab6 (focused refinement of NTD and VH ab6) | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | null | severe acute respiratory syndrome coronavirus2 | Zhu, X., Mannar, D., Saville, J.W., Srivastava, S.S., Berezuk, A.M., Zhou, S., Tuttle, K.S., Subramaniam, S. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null | null | sabdab_dataset/8dm0/annotation/8dm0_H_VH.ann | null | sabdab_dataset/8dm0/imgt/8dm0_H_H.ann | null | sabdab_dataset/8dm0/sequence/8dm0_raw.pdb | sabdab_dataset/8dm0/sequence/8dm0_H_VH.fa | null | sabdab_dataset/8dm0/structure/8dm0.pdb | sabdab_dataset/8dm0/structure/chothia/8dm0.pdb | false | false | train |
8dm3 | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 01/25/23 | Cryo-EM structure of SARS-CoV-2 Omicron BA.2 spike protein in complex with Fab 4A8 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhu, X., Saville, J.W., Mannar, D., Berezuk, A.M., Cholak, S., Tuttle, K.S., Vahdatihassani, F., Subramaniam, S. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8dm3/abangle/8dm3.abangle | sabdab_dataset/8dm3/annotation/8dm3_H_VH.ann | sabdab_dataset/8dm3/annotation/8dm3_L_VL.ann | sabdab_dataset/8dm3/imgt/8dm3_H_H.ann | sabdab_dataset/8dm3/imgt/8dm3_L_L.ann | sabdab_dataset/8dm3/sequence/8dm3_raw.pdb | sabdab_dataset/8dm3/sequence/8dm3_H_VH.fa | sabdab_dataset/8dm3/sequence/8dm3_L_VL.fa | sabdab_dataset/8dm3/structure/8dm3.pdb | sabdab_dataset/8dm3/structure/chothia/8dm3.pdb | false | false | train |
8dm3 | M | N | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 01/25/23 | Cryo-EM structure of SARS-CoV-2 Omicron BA.2 spike protein in complex with Fab 4A8 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhu, X., Saville, J.W., Mannar, D., Berezuk, A.M., Cholak, S., Tuttle, K.S., Vahdatihassani, F., Subramaniam, S. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8dm3/abangle/8dm3.abangle | sabdab_dataset/8dm3/annotation/8dm3_M_VH.ann | sabdab_dataset/8dm3/annotation/8dm3_N_VL.ann | sabdab_dataset/8dm3/imgt/8dm3_M_H.ann | sabdab_dataset/8dm3/imgt/8dm3_N_L.ann | sabdab_dataset/8dm3/sequence/8dm3_raw.pdb | sabdab_dataset/8dm3/sequence/8dm3_M_VH.fa | sabdab_dataset/8dm3/sequence/8dm3_N_VL.fa | sabdab_dataset/8dm3/structure/8dm3.pdb | sabdab_dataset/8dm3/structure/chothia/8dm3.pdb | false | false | train |
8dm3 | P | Q | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 01/25/23 | Cryo-EM structure of SARS-CoV-2 Omicron BA.2 spike protein in complex with Fab 4A8 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhu, X., Saville, J.W., Mannar, D., Berezuk, A.M., Cholak, S., Tuttle, K.S., Vahdatihassani, F., Subramaniam, S. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8dm3/abangle/8dm3.abangle | sabdab_dataset/8dm3/annotation/8dm3_P_VH.ann | sabdab_dataset/8dm3/annotation/8dm3_Q_VL.ann | sabdab_dataset/8dm3/imgt/8dm3_P_H.ann | sabdab_dataset/8dm3/imgt/8dm3_Q_L.ann | sabdab_dataset/8dm3/sequence/8dm3_raw.pdb | sabdab_dataset/8dm3/sequence/8dm3_P_VH.fa | sabdab_dataset/8dm3/sequence/8dm3_Q_VL.fa | sabdab_dataset/8dm3/structure/8dm3.pdb | sabdab_dataset/8dm3/structure/chothia/8dm3.pdb | false | false | test |
8dm4 | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 01/25/23 | Cryo-EM structure of SARS-CoV-2 Omicron BA.2 spike protein in complex with Fab 4A8 (focused refinement of NTD and 4A8) | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhu, X., Saville, J.W., Mannar, D., Berezuk, A.M., Cholak, S., Tuttle, K.S., Vahdatihassani, F., Subramaniam, S. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8dm4/abangle/8dm4.abangle | sabdab_dataset/8dm4/annotation/8dm4_H_VH.ann | sabdab_dataset/8dm4/annotation/8dm4_L_VL.ann | sabdab_dataset/8dm4/imgt/8dm4_H_H.ann | sabdab_dataset/8dm4/imgt/8dm4_L_L.ann | sabdab_dataset/8dm4/sequence/8dm4_raw.pdb | sabdab_dataset/8dm4/sequence/8dm4_H_VH.fa | sabdab_dataset/8dm4/sequence/8dm4_L_VL.fa | sabdab_dataset/8dm4/structure/8dm4.pdb | sabdab_dataset/8dm4/structure/chothia/8dm4.pdb | false | false | validation |
8dmh | F | E | 0 | a | A | protein | protein | NA | NA | unknown | glycoprotein g2,cobalamin adenosyltransferase-like domain-containing protein trimerization tag | VIRAL PROTEIN/IMMUNE SYSTEM | 04/12/23 | Lymphocytic choriomeningitis virus glycoprotein in complex with neutralizing antibody M28 | Homo sapiens; Lymphocytic choriomeningitis virus | homo sapiens | homo sapiens | lymphocytic choriomeningitis virus | lymphocytic choriomeningitis virus | Moon-Walker, A., Hastie, K.M., Zyla, D.S., Saphire, E.O. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8dmh/abangle/8dmh.abangle | sabdab_dataset/8dmh/annotation/8dmh_F_VH.ann | sabdab_dataset/8dmh/annotation/8dmh_E_VL.ann | sabdab_dataset/8dmh/imgt/8dmh_F_H.ann | sabdab_dataset/8dmh/imgt/8dmh_E_L.ann | sabdab_dataset/8dmh/sequence/8dmh_raw.pdb | sabdab_dataset/8dmh/sequence/8dmh_F_VH.fa | sabdab_dataset/8dmh/sequence/8dmh_E_VL.fa | sabdab_dataset/8dmh/structure/8dmh.pdb | sabdab_dataset/8dmh/structure/chothia/8dmh.pdb | false | false | train |
8dmh | H | G | 0 | b | B | protein | protein | NA | NA | unknown | glycoprotein g2,cobalamin adenosyltransferase-like domain-containing protein trimerization tag | VIRAL PROTEIN/IMMUNE SYSTEM | 04/12/23 | Lymphocytic choriomeningitis virus glycoprotein in complex with neutralizing antibody M28 | Homo sapiens; Lymphocytic choriomeningitis virus | homo sapiens | homo sapiens | lymphocytic choriomeningitis virus | lymphocytic choriomeningitis virus | Moon-Walker, A., Hastie, K.M., Zyla, D.S., Saphire, E.O. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8dmh/abangle/8dmh.abangle | sabdab_dataset/8dmh/annotation/8dmh_H_VH.ann | sabdab_dataset/8dmh/annotation/8dmh_G_VL.ann | sabdab_dataset/8dmh/imgt/8dmh_H_H.ann | sabdab_dataset/8dmh/imgt/8dmh_G_L.ann | sabdab_dataset/8dmh/sequence/8dmh_raw.pdb | sabdab_dataset/8dmh/sequence/8dmh_H_VH.fa | sabdab_dataset/8dmh/sequence/8dmh_G_VL.fa | sabdab_dataset/8dmh/structure/8dmh.pdb | sabdab_dataset/8dmh/structure/chothia/8dmh.pdb | false | false | train |
8dmh | J | I | 0 | c | C | protein | protein | NA | NA | unknown | glycoprotein g2,cobalamin adenosyltransferase-like domain-containing protein trimerization tag | VIRAL PROTEIN/IMMUNE SYSTEM | 04/12/23 | Lymphocytic choriomeningitis virus glycoprotein in complex with neutralizing antibody M28 | Homo sapiens; Lymphocytic choriomeningitis virus | homo sapiens | homo sapiens | lymphocytic choriomeningitis virus | lymphocytic choriomeningitis virus | Moon-Walker, A., Hastie, K.M., Zyla, D.S., Saphire, E.O. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8dmh/abangle/8dmh.abangle | sabdab_dataset/8dmh/annotation/8dmh_J_VH.ann | sabdab_dataset/8dmh/annotation/8dmh_I_VL.ann | sabdab_dataset/8dmh/imgt/8dmh_J_H.ann | sabdab_dataset/8dmh/imgt/8dmh_I_L.ann | sabdab_dataset/8dmh/sequence/8dmh_raw.pdb | sabdab_dataset/8dmh/sequence/8dmh_J_VH.fa | sabdab_dataset/8dmh/sequence/8dmh_I_VL.fa | sabdab_dataset/8dmh/structure/8dmh.pdb | sabdab_dataset/8dmh/structure/chothia/8dmh.pdb | false | false | test |
8dmj | D | E | 0 | C | protein | null | fusion glycoprotein f0,fusion glycoprotein f1 | VIRAL PROTEIN/Immune System | 07/12/23 | Postfusion Nipah virus fusion protein in complex with Fab 1H1 | Mus musculus; Nipah henipavirus | mus musculus | mus musculus | nipah henipavirus | Byrne, P.O., Blade, E.G., McLellan, J.S. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV12 | Kappa | null | null | null | null | null | sabdab_dataset/8dmj/abangle/8dmj.abangle | sabdab_dataset/8dmj/annotation/8dmj_D_VH.ann | sabdab_dataset/8dmj/annotation/8dmj_E_VL.ann | sabdab_dataset/8dmj/imgt/8dmj_D_H.ann | sabdab_dataset/8dmj/imgt/8dmj_E_L.ann | sabdab_dataset/8dmj/sequence/8dmj_raw.pdb | sabdab_dataset/8dmj/sequence/8dmj_D_VH.fa | sabdab_dataset/8dmj/sequence/8dmj_E_VL.fa | sabdab_dataset/8dmj/structure/8dmj.pdb | sabdab_dataset/8dmj/structure/chothia/8dmj.pdb | false | false | train |
8dmj | H | L | 0 | B | protein | null | fusion glycoprotein f0,fusion glycoprotein f1 | VIRAL PROTEIN/Immune System | 07/12/23 | Postfusion Nipah virus fusion protein in complex with Fab 1H1 | Mus musculus; Nipah henipavirus | mus musculus | mus musculus | nipah henipavirus | Byrne, P.O., Blade, E.G., McLellan, J.S. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV12 | Kappa | null | null | null | null | null | sabdab_dataset/8dmj/abangle/8dmj.abangle | sabdab_dataset/8dmj/annotation/8dmj_H_VH.ann | sabdab_dataset/8dmj/annotation/8dmj_L_VL.ann | sabdab_dataset/8dmj/imgt/8dmj_H_H.ann | sabdab_dataset/8dmj/imgt/8dmj_L_L.ann | sabdab_dataset/8dmj/sequence/8dmj_raw.pdb | sabdab_dataset/8dmj/sequence/8dmj_H_VH.fa | sabdab_dataset/8dmj/sequence/8dmj_L_VL.fa | sabdab_dataset/8dmj/structure/8dmj.pdb | sabdab_dataset/8dmj/structure/chothia/8dmj.pdb | false | false | train |
8dn6 | C | D | 0 | A | protein | null | protein toc75-3, chloroplastic | MEMBRANE PROTEIN | 05/17/23 | The crystal structure of the Arabidopsis thaliana Toc75 POTRA domains in complex with fab tc2 | Arabidopsis thaliana; synthetic construct | synthetic construct | synthetic construct | arabidopsis thaliana | Srinivasan, K., Noinaj, N. | 3 | X-RAY DIFFRACTION | 0.293 | 0.24 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dn6/abangle/8dn6.abangle | sabdab_dataset/8dn6/annotation/8dn6_C_VH.ann | sabdab_dataset/8dn6/annotation/8dn6_D_VL.ann | sabdab_dataset/8dn6/imgt/8dn6_C_H.ann | sabdab_dataset/8dn6/imgt/8dn6_D_L.ann | sabdab_dataset/8dn6/sequence/8dn6_raw.pdb | sabdab_dataset/8dn6/sequence/8dn6_C_VH.fa | sabdab_dataset/8dn6/sequence/8dn6_D_VL.fa | sabdab_dataset/8dn6/structure/8dn6.pdb | sabdab_dataset/8dn6/structure/chothia/8dn6.pdb | false | false | test |
8dn6 | E | F | 0 | B | protein | null | protein toc75-3, chloroplastic | MEMBRANE PROTEIN | 05/17/23 | The crystal structure of the Arabidopsis thaliana Toc75 POTRA domains in complex with fab tc2 | Arabidopsis thaliana; synthetic construct | synthetic construct | synthetic construct | arabidopsis thaliana | Srinivasan, K., Noinaj, N. | 3 | X-RAY DIFFRACTION | 0.293 | 0.24 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dn6/abangle/8dn6.abangle | sabdab_dataset/8dn6/annotation/8dn6_E_VH.ann | sabdab_dataset/8dn6/annotation/8dn6_F_VL.ann | sabdab_dataset/8dn6/imgt/8dn6_E_H.ann | sabdab_dataset/8dn6/imgt/8dn6_F_L.ann | sabdab_dataset/8dn6/sequence/8dn6_raw.pdb | sabdab_dataset/8dn6/sequence/8dn6_E_VH.fa | sabdab_dataset/8dn6/sequence/8dn6_F_VL.fa | sabdab_dataset/8dn6/structure/8dn6.pdb | sabdab_dataset/8dn6/structure/chothia/8dn6.pdb | false | false | train |
8dn7 | A | B | 0 | C | protein | null | protein toc75, chloroplastic | Membrane Protein/Immune System | 05/17/23 | The crystal structure of the Pisum sativum Toc75 POTRA domains in complex with fab ax9 | Pisum sativum; synthetic construct | synthetic construct | synthetic construct | pisum sativum | Srinivasan, K., Noinaj, N. | 2 | X-RAY DIFFRACTION | 0.259 | 0.211 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dn7/abangle/8dn7.abangle | sabdab_dataset/8dn7/annotation/8dn7_A_VH.ann | sabdab_dataset/8dn7/annotation/8dn7_B_VL.ann | sabdab_dataset/8dn7/imgt/8dn7_A_H.ann | sabdab_dataset/8dn7/imgt/8dn7_B_L.ann | sabdab_dataset/8dn7/sequence/8dn7_raw.pdb | sabdab_dataset/8dn7/sequence/8dn7_A_VH.fa | sabdab_dataset/8dn7/sequence/8dn7_B_VL.fa | sabdab_dataset/8dn7/structure/8dn7.pdb | sabdab_dataset/8dn7/structure/chothia/8dn7.pdb | false | false | train |
8dn7 | D | H | 0 | E | protein | null | protein toc75, chloroplastic | Membrane Protein/Immune System | 05/17/23 | The crystal structure of the Pisum sativum Toc75 POTRA domains in complex with fab ax9 | Pisum sativum; synthetic construct | synthetic construct | synthetic construct | pisum sativum | Srinivasan, K., Noinaj, N. | 2 | X-RAY DIFFRACTION | 0.259 | 0.211 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dn7/abangle/8dn7.abangle | sabdab_dataset/8dn7/annotation/8dn7_D_VH.ann | sabdab_dataset/8dn7/annotation/8dn7_H_VL.ann | sabdab_dataset/8dn7/imgt/8dn7_D_H.ann | sabdab_dataset/8dn7/imgt/8dn7_H_L.ann | sabdab_dataset/8dn7/sequence/8dn7_raw.pdb | sabdab_dataset/8dn7/sequence/8dn7_D_VH.fa | sabdab_dataset/8dn7/sequence/8dn7_H_VL.fa | sabdab_dataset/8dn7/structure/8dn7.pdb | sabdab_dataset/8dn7/structure/chothia/8dn7.pdb | false | false | test |
8dnn | B | C | 0 | A | protein | null | spike protein s1 | IMMUNE SYSTEM/VIRAL PROTEIN | 05/24/23 | Crystal structure of neutralizing antibody 80 in complex with SARS-CoV-2 receptor binding domain | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Muthuraman, K., Kucharska, I., Ivanochko, D., Julien, J.P. | 3.12 | X-RAY DIFFRACTION | 0.252 | 0.193 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null | sabdab_dataset/8dnn/abangle/8dnn.abangle | sabdab_dataset/8dnn/annotation/8dnn_B_VH.ann | sabdab_dataset/8dnn/annotation/8dnn_C_VL.ann | sabdab_dataset/8dnn/imgt/8dnn_B_H.ann | sabdab_dataset/8dnn/imgt/8dnn_C_L.ann | sabdab_dataset/8dnn/sequence/8dnn_raw.pdb | sabdab_dataset/8dnn/sequence/8dnn_B_VH.fa | sabdab_dataset/8dnn/sequence/8dnn_C_VL.fa | sabdab_dataset/8dnn/structure/8dnn.pdb | sabdab_dataset/8dnn/structure/chothia/8dnn.pdb | true | false | validation |
8dnn | E | F | 0 | D | protein | null | spike protein s1 | IMMUNE SYSTEM/VIRAL PROTEIN | 05/24/23 | Crystal structure of neutralizing antibody 80 in complex with SARS-CoV-2 receptor binding domain | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Muthuraman, K., Kucharska, I., Ivanochko, D., Julien, J.P. | 3.12 | X-RAY DIFFRACTION | 0.252 | 0.193 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null | sabdab_dataset/8dnn/abangle/8dnn.abangle | sabdab_dataset/8dnn/annotation/8dnn_E_VH.ann | sabdab_dataset/8dnn/annotation/8dnn_F_VL.ann | sabdab_dataset/8dnn/imgt/8dnn_E_H.ann | sabdab_dataset/8dnn/imgt/8dnn_F_L.ann | sabdab_dataset/8dnn/sequence/8dnn_raw.pdb | sabdab_dataset/8dnn/sequence/8dnn_E_VH.fa | sabdab_dataset/8dnn/sequence/8dnn_F_VL.fa | sabdab_dataset/8dnn/structure/8dnn.pdb | sabdab_dataset/8dnn/structure/chothia/8dnn.pdb | true | false | test |
8dok | C | D | 0 | B | protein | null | crf-1_ae t/f100 hiv-1 gp41 | VIRAL PROTEIN/IMMUNE SYSTEM | 07/19/23 | Cryo-EM structure of T/F100 SOSIP.664 HIV-1 Env trimer in complex with 8ANC195 and 10-1074 | Homo sapiens; Human immunodeficiency virus 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Chen, Y., Zhou, F., Huang, R., Tolbert, W., Pazgier, M. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dok/abangle/8dok.abangle | sabdab_dataset/8dok/annotation/8dok_C_VH.ann | sabdab_dataset/8dok/annotation/8dok_D_VL.ann | sabdab_dataset/8dok/imgt/8dok_C_H.ann | sabdab_dataset/8dok/imgt/8dok_D_L.ann | sabdab_dataset/8dok/sequence/8dok_raw.pdb | sabdab_dataset/8dok/sequence/8dok_C_VH.fa | sabdab_dataset/8dok/sequence/8dok_D_VL.fa | sabdab_dataset/8dok/structure/8dok.pdb | sabdab_dataset/8dok/structure/chothia/8dok.pdb | false | false | train |
8dok | G | H | 0 | E | F | protein | protein | NA | NA | crf-1_ae t/f100 env gp120 | crf-1_ae t/f100 hiv-1 gp41 | VIRAL PROTEIN/IMMUNE SYSTEM | 07/19/23 | Cryo-EM structure of T/F100 SOSIP.664 HIV-1 Env trimer in complex with 8ANC195 and 10-1074 | Homo sapiens; Human immunodeficiency virus 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Chen, Y., Zhou, F., Huang, R., Tolbert, W., Pazgier, M. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dok/abangle/8dok.abangle | sabdab_dataset/8dok/annotation/8dok_G_VH.ann | sabdab_dataset/8dok/annotation/8dok_H_VL.ann | sabdab_dataset/8dok/imgt/8dok_G_H.ann | sabdab_dataset/8dok/imgt/8dok_H_L.ann | sabdab_dataset/8dok/sequence/8dok_raw.pdb | sabdab_dataset/8dok/sequence/8dok_G_VH.fa | sabdab_dataset/8dok/sequence/8dok_H_VL.fa | sabdab_dataset/8dok/structure/8dok.pdb | sabdab_dataset/8dok/structure/chothia/8dok.pdb | false | false | train |
8dok | K | L | 0 | J | protein | null | crf-1_ae t/f100 hiv-1 gp41 | VIRAL PROTEIN/IMMUNE SYSTEM | 07/19/23 | Cryo-EM structure of T/F100 SOSIP.664 HIV-1 Env trimer in complex with 8ANC195 and 10-1074 | Homo sapiens; Human immunodeficiency virus 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Chen, Y., Zhou, F., Huang, R., Tolbert, W., Pazgier, M. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dok/abangle/8dok.abangle | sabdab_dataset/8dok/annotation/8dok_K_VH.ann | sabdab_dataset/8dok/annotation/8dok_L_VL.ann | sabdab_dataset/8dok/imgt/8dok_K_H.ann | sabdab_dataset/8dok/imgt/8dok_L_L.ann | sabdab_dataset/8dok/sequence/8dok_raw.pdb | sabdab_dataset/8dok/sequence/8dok_K_VH.fa | sabdab_dataset/8dok/sequence/8dok_L_VL.fa | sabdab_dataset/8dok/structure/8dok.pdb | sabdab_dataset/8dok/structure/chothia/8dok.pdb | false | false | train |
8dok | M | N | 0 | A | protein | null | crf-1_ae t/f100 env gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 07/19/23 | Cryo-EM structure of T/F100 SOSIP.664 HIV-1 Env trimer in complex with 8ANC195 and 10-1074 | Homo sapiens; Human immunodeficiency virus 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Chen, Y., Zhou, F., Huang, R., Tolbert, W., Pazgier, M. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dok/abangle/8dok.abangle | sabdab_dataset/8dok/annotation/8dok_M_VH.ann | sabdab_dataset/8dok/annotation/8dok_N_VL.ann | sabdab_dataset/8dok/imgt/8dok_M_H.ann | sabdab_dataset/8dok/imgt/8dok_N_L.ann | sabdab_dataset/8dok/sequence/8dok_raw.pdb | sabdab_dataset/8dok/sequence/8dok_M_VH.fa | sabdab_dataset/8dok/sequence/8dok_N_VL.fa | sabdab_dataset/8dok/structure/8dok.pdb | sabdab_dataset/8dok/structure/chothia/8dok.pdb | false | false | test |
8dok | O | P | 0 | E | protein | null | crf-1_ae t/f100 env gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 07/19/23 | Cryo-EM structure of T/F100 SOSIP.664 HIV-1 Env trimer in complex with 8ANC195 and 10-1074 | Homo sapiens; Human immunodeficiency virus 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Chen, Y., Zhou, F., Huang, R., Tolbert, W., Pazgier, M. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dok/abangle/8dok.abangle | sabdab_dataset/8dok/annotation/8dok_O_VH.ann | sabdab_dataset/8dok/annotation/8dok_P_VL.ann | sabdab_dataset/8dok/imgt/8dok_O_H.ann | sabdab_dataset/8dok/imgt/8dok_P_L.ann | sabdab_dataset/8dok/sequence/8dok_raw.pdb | sabdab_dataset/8dok/sequence/8dok_O_VH.fa | sabdab_dataset/8dok/sequence/8dok_P_VL.fa | sabdab_dataset/8dok/structure/8dok.pdb | sabdab_dataset/8dok/structure/chothia/8dok.pdb | false | false | train |
8dok | Q | R | 0 | I | protein | null | crf-1_ae t/f100 env gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 07/19/23 | Cryo-EM structure of T/F100 SOSIP.664 HIV-1 Env trimer in complex with 8ANC195 and 10-1074 | Homo sapiens; Human immunodeficiency virus 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Chen, Y., Zhou, F., Huang, R., Tolbert, W., Pazgier, M. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dok/abangle/8dok.abangle | sabdab_dataset/8dok/annotation/8dok_Q_VH.ann | sabdab_dataset/8dok/annotation/8dok_R_VL.ann | sabdab_dataset/8dok/imgt/8dok_Q_H.ann | sabdab_dataset/8dok/imgt/8dok_R_L.ann | sabdab_dataset/8dok/sequence/8dok_raw.pdb | sabdab_dataset/8dok/sequence/8dok_Q_VH.fa | sabdab_dataset/8dok/sequence/8dok_R_VL.fa | sabdab_dataset/8dok/structure/8dok.pdb | sabdab_dataset/8dok/structure/chothia/8dok.pdb | false | false | train |
8dow | C | D | 0 | A | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/Immune System | 07/19/23 | Cryo-EM structure of HIV-1 Env(CH848 10.17 DS.SOSIP_DT) in complex with DH1030.1 Fab | Human immunodeficiency virus 1; Macaca mulatta | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | Gobeil, S., Acharya, P. | 3.69 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8dow/abangle/8dow.abangle | sabdab_dataset/8dow/annotation/8dow_C_VH.ann | sabdab_dataset/8dow/annotation/8dow_D_VL.ann | sabdab_dataset/8dow/imgt/8dow_C_H.ann | sabdab_dataset/8dow/imgt/8dow_D_L.ann | sabdab_dataset/8dow/sequence/8dow_raw.pdb | sabdab_dataset/8dow/sequence/8dow_C_VH.fa | sabdab_dataset/8dow/sequence/8dow_D_VL.fa | sabdab_dataset/8dow/structure/8dow.pdb | sabdab_dataset/8dow/structure/chothia/8dow.pdb | false | false | train |
8dow | G | H | 0 | E | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/Immune System | 07/19/23 | Cryo-EM structure of HIV-1 Env(CH848 10.17 DS.SOSIP_DT) in complex with DH1030.1 Fab | Human immunodeficiency virus 1; Macaca mulatta | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | Gobeil, S., Acharya, P. | 3.69 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8dow/abangle/8dow.abangle | sabdab_dataset/8dow/annotation/8dow_G_VH.ann | sabdab_dataset/8dow/annotation/8dow_H_VL.ann | sabdab_dataset/8dow/imgt/8dow_G_H.ann | sabdab_dataset/8dow/imgt/8dow_H_L.ann | sabdab_dataset/8dow/sequence/8dow_raw.pdb | sabdab_dataset/8dow/sequence/8dow_G_VH.fa | sabdab_dataset/8dow/sequence/8dow_H_VL.fa | sabdab_dataset/8dow/structure/8dow.pdb | sabdab_dataset/8dow/structure/chothia/8dow.pdb | false | false | train |
8dow | K | L | 0 | I | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/Immune System | 07/19/23 | Cryo-EM structure of HIV-1 Env(CH848 10.17 DS.SOSIP_DT) in complex with DH1030.1 Fab | Human immunodeficiency virus 1; Macaca mulatta | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | Gobeil, S., Acharya, P. | 3.69 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8dow/abangle/8dow.abangle | sabdab_dataset/8dow/annotation/8dow_K_VH.ann | sabdab_dataset/8dow/annotation/8dow_L_VL.ann | sabdab_dataset/8dow/imgt/8dow_K_H.ann | sabdab_dataset/8dow/imgt/8dow_L_L.ann | sabdab_dataset/8dow/sequence/8dow_raw.pdb | sabdab_dataset/8dow/sequence/8dow_K_VH.fa | sabdab_dataset/8dow/sequence/8dow_L_VL.fa | sabdab_dataset/8dow/structure/8dow.pdb | sabdab_dataset/8dow/structure/chothia/8dow.pdb | false | false | train |
8doz | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 06/21/23 | Protective antibody against gonococcal lipooligosaccharide | Mus musculus | mus musculus | mus musculus | null | Beernink, P.T. | 1.7 | X-RAY DIFFRACTION | 0.216 | 0.177 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8doz/abangle/8doz.abangle | sabdab_dataset/8doz/annotation/8doz_A_VH.ann | sabdab_dataset/8doz/annotation/8doz_B_VL.ann | sabdab_dataset/8doz/imgt/8doz_A_H.ann | sabdab_dataset/8doz/imgt/8doz_B_L.ann | sabdab_dataset/8doz/sequence/8doz_raw.pdb | sabdab_dataset/8doz/sequence/8doz_A_VH.fa | sabdab_dataset/8doz/sequence/8doz_B_VL.fa | sabdab_dataset/8doz/structure/8doz.pdb | sabdab_dataset/8doz/structure/chothia/8doz.pdb | true | false | train |
8doz | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 06/21/23 | Protective antibody against gonococcal lipooligosaccharide | Mus musculus | mus musculus | mus musculus | null | Beernink, P.T. | 1.7 | X-RAY DIFFRACTION | 0.216 | 0.177 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8doz/abangle/8doz.abangle | sabdab_dataset/8doz/annotation/8doz_C_VH.ann | sabdab_dataset/8doz/annotation/8doz_D_VL.ann | sabdab_dataset/8doz/imgt/8doz_C_H.ann | sabdab_dataset/8doz/imgt/8doz_D_L.ann | sabdab_dataset/8doz/sequence/8doz_raw.pdb | sabdab_dataset/8doz/sequence/8doz_C_VH.fa | sabdab_dataset/8doz/sequence/8doz_D_VL.fa | sabdab_dataset/8doz/structure/8doz.pdb | sabdab_dataset/8doz/structure/chothia/8doz.pdb | true | false | validation |
8dp0 | B | null | 0 | A | protein | null | phosphatidylinositol 4,5-bisphosphate 3-kinase catalyticsubunit gamma isoform | TRANSFERASE/IMMUNE SYSTEM | 07/19/23 | Structure of p110 gamma bound to the Ras inhibitory nanobody NB7 | Homo sapiens; Lama glama | lama glama | null | homo sapiens | Burke, J.E., Nam, S.E., Rathinaswamy, M.K., Yip, C.K. | 2.96 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8dp0/annotation/8dp0_B_VH.ann | null | sabdab_dataset/8dp0/imgt/8dp0_B_H.ann | null | sabdab_dataset/8dp0/sequence/8dp0_raw.pdb | sabdab_dataset/8dp0/sequence/8dp0_B_VH.fa | null | sabdab_dataset/8dp0/structure/8dp0.pdb | sabdab_dataset/8dp0/structure/chothia/8dp0.pdb | false | false | train |
8dp1 | E | F | 0 | B | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/Immune System | 01/08/09 | Cryo-EM structure of HIV-1 Env(BG505.T332N SOSIP) in complex with DH1030.1 Fab | Human immunodeficiency virus 1; Macaca mulatta | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | Gobeil, S., Acharya, P. | 3.46 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8dp1/abangle/8dp1.abangle | sabdab_dataset/8dp1/annotation/8dp1_E_VH.ann | sabdab_dataset/8dp1/annotation/8dp1_F_VL.ann | sabdab_dataset/8dp1/imgt/8dp1_E_H.ann | sabdab_dataset/8dp1/imgt/8dp1_F_L.ann | sabdab_dataset/8dp1/sequence/8dp1_raw.pdb | sabdab_dataset/8dp1/sequence/8dp1_E_VH.fa | sabdab_dataset/8dp1/sequence/8dp1_F_VL.fa | sabdab_dataset/8dp1/structure/8dp1.pdb | sabdab_dataset/8dp1/structure/chothia/8dp1.pdb | false | false | train |
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