pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 365
values | r_factor stringclasses 358
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values | abangle stringlengths 40 40 ⌀ | annotation_H stringlengths 44 44 ⌀ | annotation_L stringlengths 44 44 ⌀ | imgt_H stringlengths 37 37 ⌀ | imgt_L stringlengths 37 37 ⌀ | sequence_raw stringlengths 41 41 | sequence_H stringlengths 41 41 ⌀ | sequence_L stringlengths 41 41 ⌀ | structure stringlengths 38 38 | structure_chothia stringlengths 46 46 | in_nr_set bool 2
classes | curated_quality_dataset bool 2
classes | split stringclasses 3
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
8dp1 | N | O | 0 | J | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/Immune System | 01/08/09 | Cryo-EM structure of HIV-1 Env(BG505.T332N SOSIP) in complex with DH1030.1 Fab | Human immunodeficiency virus 1; Macaca mulatta | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | Gobeil, S., Acharya, P. | 3.46 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8dp1/abangle/8dp1.abangle | sabdab_dataset/8dp1/annotation/8dp1_N_VH.ann | sabdab_dataset/8dp1/annotation/8dp1_O_VL.ann | sabdab_dataset/8dp1/imgt/8dp1_N_H.ann | sabdab_dataset/8dp1/imgt/8dp1_O_L.ann | sabdab_dataset/8dp1/sequence/8dp1_raw.pdb | sabdab_dataset/8dp1/sequence/8dp1_N_VH.fa | sabdab_dataset/8dp1/sequence/8dp1_O_VL.fa | sabdab_dataset/8dp1/structure/8dp1.pdb | sabdab_dataset/8dp1/structure/chothia/8dp1.pdb | false | false | train |
8dp1 | R | M | 0 | W | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/Immune System | 01/08/09 | Cryo-EM structure of HIV-1 Env(BG505.T332N SOSIP) in complex with DH1030.1 Fab | Human immunodeficiency virus 1; Macaca mulatta | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | Gobeil, S., Acharya, P. | 3.46 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8dp1/abangle/8dp1.abangle | sabdab_dataset/8dp1/annotation/8dp1_R_VH.ann | sabdab_dataset/8dp1/annotation/8dp1_M_VL.ann | sabdab_dataset/8dp1/imgt/8dp1_R_H.ann | sabdab_dataset/8dp1/imgt/8dp1_M_L.ann | sabdab_dataset/8dp1/sequence/8dp1_raw.pdb | sabdab_dataset/8dp1/sequence/8dp1_R_VH.fa | sabdab_dataset/8dp1/sequence/8dp1_M_VL.fa | sabdab_dataset/8dp1/structure/8dp1.pdb | sabdab_dataset/8dp1/structure/chothia/8dp1.pdb | false | false | train |
8dp3 | H | L | 0 | R | nucleic-acid | null | rna (90-mer) | IMMUNE SYSTEM/RNA | 04/19/23 | Crystal structure of coxsackievirus B3 cloverleaf RNA replication element | synthetic construct; SYNTHETIC CONSTRUCT | synthetic construct | synthetic construct | coxsackievirus b3 | Das, N.K., Koirala, D. | 1.91 | X-RAY DIFFRACTION | 0.259 | 0.209 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dp3/abangle/8dp3.abangle | sabdab_dataset/8dp3/annotation/8dp3_H_VH.ann | sabdab_dataset/8dp3/annotation/8dp3_L_VL.ann | sabdab_dataset/8dp3/imgt/8dp3_H_H.ann | sabdab_dataset/8dp3/imgt/8dp3_L_L.ann | sabdab_dataset/8dp3/sequence/8dp3_raw.pdb | sabdab_dataset/8dp3/sequence/8dp3_H_VH.fa | sabdab_dataset/8dp3/sequence/8dp3_L_VL.fa | sabdab_dataset/8dp3/structure/8dp3.pdb | sabdab_dataset/8dp3/structure/chothia/8dp3.pdb | false | false | train |
8dpf | E | e | 0 | B | C | protein | protein | NA | NA | g-alpha subunit q (gi2-mini-gq chimeric) | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 08/24/22 | Cryo-EM structure of the 5HT2C receptor (INI isoform) bound to lorcaserin | Homo sapiens | homo sapiens | null | homo sapiens | homo sapiens | Gumpper, R.H., Fay, J.F., Roth, B.L. | 0 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dpf/abangle/8dpf.abangle | sabdab_dataset/8dpf/annotation/8dpf_E_VH.ann | sabdab_dataset/8dpf/annotation/8dpf_E_VL.ann | sabdab_dataset/8dpf/imgt/8dpf_E_H.ann | sabdab_dataset/8dpf/imgt/8dpf_E_L.ann | sabdab_dataset/8dpf/sequence/8dpf_raw.pdb | sabdab_dataset/8dpf/sequence/8dpf_E_VH.fa | sabdab_dataset/8dpf/sequence/8dpf_E_VL.fa | sabdab_dataset/8dpf/structure/8dpf.pdb | sabdab_dataset/8dpf/structure/chothia/8dpf.pdb | false | false | train |
8dpg | E | e | 0 | B | C | protein | protein | NA | NA | g-alpha subunit q (gi2-mini-gq chimera) | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 08/24/22 | Cryo-EM structure of the 5HT2C receptor (INI isoform) bound to psilocin | Homo sapiens | homo sapiens | null | homo sapiens | homo sapiens | Gumpper, R.H., Fay, J.F., Roth, B.L. | 0 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dpg/abangle/8dpg.abangle | sabdab_dataset/8dpg/annotation/8dpg_E_VH.ann | sabdab_dataset/8dpg/annotation/8dpg_E_VL.ann | sabdab_dataset/8dpg/imgt/8dpg_E_H.ann | sabdab_dataset/8dpg/imgt/8dpg_E_L.ann | sabdab_dataset/8dpg/sequence/8dpg_raw.pdb | sabdab_dataset/8dpg/sequence/8dpg_E_VH.fa | sabdab_dataset/8dpg/sequence/8dpg_E_VL.fa | sabdab_dataset/8dpg/structure/8dpg.pdb | sabdab_dataset/8dpg/structure/chothia/8dpg.pdb | false | false | train |
8dph | E | e | 0 | B | C | protein | protein | NA | NA | g-alpha subunit q (gi2-mini-gq chimeric) | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 08/24/22 | Cryo-EM structure of the 5HT2C receptor (VGV isoform) bound to lorcaserin | Homo sapiens | homo sapiens | null | homo sapiens | homo sapiens | Gumpper, R.H., Fay, J.F., Roth, B.L. | 0 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dph/abangle/8dph.abangle | sabdab_dataset/8dph/annotation/8dph_E_VH.ann | sabdab_dataset/8dph/annotation/8dph_E_VL.ann | sabdab_dataset/8dph/imgt/8dph_E_H.ann | sabdab_dataset/8dph/imgt/8dph_E_L.ann | sabdab_dataset/8dph/sequence/8dph_raw.pdb | sabdab_dataset/8dph/sequence/8dph_E_VH.fa | sabdab_dataset/8dph/sequence/8dph_E_VL.fa | sabdab_dataset/8dph/structure/8dph.pdb | sabdab_dataset/8dph/structure/chothia/8dph.pdb | false | false | test |
8dpi | E | e | 0 | B | C | protein | protein | NA | NA | g-alpha subunit q (gi2-mini-gq chimera) | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 08/24/22 | Cryo-EM structure of the 5HT2C receptor (VSV isoform) bound to lorcaserin | Homo sapiens | homo sapiens | null | homo sapiens | homo sapiens | Gumpper, R.H., Fay, J.F., Roth, B.L. | 0 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dpi/abangle/8dpi.abangle | sabdab_dataset/8dpi/annotation/8dpi_E_VH.ann | sabdab_dataset/8dpi/annotation/8dpi_E_VL.ann | sabdab_dataset/8dpi/imgt/8dpi_E_H.ann | sabdab_dataset/8dpi/imgt/8dpi_E_L.ann | sabdab_dataset/8dpi/sequence/8dpi_raw.pdb | sabdab_dataset/8dpi/sequence/8dpi_E_VH.fa | sabdab_dataset/8dpi/sequence/8dpi_E_VL.fa | sabdab_dataset/8dpi/structure/8dpi.pdb | sabdab_dataset/8dpi/structure/chothia/8dpi.pdb | false | false | test |
8dpl | A | B | 0 | D | protein | null | glycoprotein gp1 | VIRAL PROTEIN/Immune System | 07/19/23 | Structure of EBOV GP lacking the mucin-like domain with 2.1.1D5 scFv and 6D6 scFv bound | Ebola virus - Mayinga, Zaire, 1976; Homo sapiens; Mus musculus | homo sapiens | homo sapiens | ebola virus - mayinga, zaire, 1976 | Yu, X., Saphire, E.O. | 2.53 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dpl/abangle/8dpl.abangle | sabdab_dataset/8dpl/annotation/8dpl_A_VH.ann | sabdab_dataset/8dpl/annotation/8dpl_B_VL.ann | sabdab_dataset/8dpl/imgt/8dpl_A_H.ann | sabdab_dataset/8dpl/imgt/8dpl_B_L.ann | sabdab_dataset/8dpl/sequence/8dpl_raw.pdb | sabdab_dataset/8dpl/sequence/8dpl_A_VH.fa | sabdab_dataset/8dpl/sequence/8dpl_B_VL.fa | sabdab_dataset/8dpl/structure/8dpl.pdb | sabdab_dataset/8dpl/structure/chothia/8dpl.pdb | false | false | validation |
8dpl | C | c | 0 | J | protein | null | glycoprotein gp2 | VIRAL PROTEIN/Immune System | 07/19/23 | Structure of EBOV GP lacking the mucin-like domain with 2.1.1D5 scFv and 6D6 scFv bound | Ebola virus - Mayinga, Zaire, 1976; Homo sapiens; Mus musculus | mus musculus | null | ebola virus - mayinga, zaire, 1976 | Yu, X., Saphire, E.O. | 2.53 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dpl/abangle/8dpl.abangle | sabdab_dataset/8dpl/annotation/8dpl_C_VH.ann | sabdab_dataset/8dpl/annotation/8dpl_C_VL.ann | sabdab_dataset/8dpl/imgt/8dpl_C_H.ann | sabdab_dataset/8dpl/imgt/8dpl_C_L.ann | sabdab_dataset/8dpl/sequence/8dpl_raw.pdb | sabdab_dataset/8dpl/sequence/8dpl_C_VH.fa | sabdab_dataset/8dpl/sequence/8dpl_C_VL.fa | sabdab_dataset/8dpl/structure/8dpl.pdb | sabdab_dataset/8dpl/structure/chothia/8dpl.pdb | false | false | test |
8dpl | F | G | 0 | I | protein | null | glycoprotein gp1 | VIRAL PROTEIN/Immune System | 07/19/23 | Structure of EBOV GP lacking the mucin-like domain with 2.1.1D5 scFv and 6D6 scFv bound | Ebola virus - Mayinga, Zaire, 1976; Homo sapiens; Mus musculus | homo sapiens | homo sapiens | ebola virus - mayinga, zaire, 1976 | Yu, X., Saphire, E.O. | 2.53 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dpl/abangle/8dpl.abangle | sabdab_dataset/8dpl/annotation/8dpl_F_VH.ann | sabdab_dataset/8dpl/annotation/8dpl_G_VL.ann | sabdab_dataset/8dpl/imgt/8dpl_F_H.ann | sabdab_dataset/8dpl/imgt/8dpl_G_L.ann | sabdab_dataset/8dpl/sequence/8dpl_raw.pdb | sabdab_dataset/8dpl/sequence/8dpl_F_VH.fa | sabdab_dataset/8dpl/sequence/8dpl_G_VL.fa | sabdab_dataset/8dpl/structure/8dpl.pdb | sabdab_dataset/8dpl/structure/chothia/8dpl.pdb | false | false | train |
8dpl | H | h | 0 | N | protein | null | glycoprotein gp2 | VIRAL PROTEIN/Immune System | 07/19/23 | Structure of EBOV GP lacking the mucin-like domain with 2.1.1D5 scFv and 6D6 scFv bound | Ebola virus - Mayinga, Zaire, 1976; Homo sapiens; Mus musculus | mus musculus | null | ebola virus - mayinga, zaire, 1976 | Yu, X., Saphire, E.O. | 2.53 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dpl/abangle/8dpl.abangle | sabdab_dataset/8dpl/annotation/8dpl_H_VH.ann | sabdab_dataset/8dpl/annotation/8dpl_H_VL.ann | sabdab_dataset/8dpl/imgt/8dpl_H_H.ann | sabdab_dataset/8dpl/imgt/8dpl_H_L.ann | sabdab_dataset/8dpl/sequence/8dpl_raw.pdb | sabdab_dataset/8dpl/sequence/8dpl_H_VH.fa | sabdab_dataset/8dpl/sequence/8dpl_H_VL.fa | sabdab_dataset/8dpl/structure/8dpl.pdb | sabdab_dataset/8dpl/structure/chothia/8dpl.pdb | false | false | train |
8dpl | K | L | 0 | M | protein | null | glycoprotein gp1 | VIRAL PROTEIN/Immune System | 07/19/23 | Structure of EBOV GP lacking the mucin-like domain with 2.1.1D5 scFv and 6D6 scFv bound | Ebola virus - Mayinga, Zaire, 1976; Homo sapiens; Mus musculus | homo sapiens | homo sapiens | ebola virus - mayinga, zaire, 1976 | Yu, X., Saphire, E.O. | 2.53 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dpl/abangle/8dpl.abangle | sabdab_dataset/8dpl/annotation/8dpl_K_VH.ann | sabdab_dataset/8dpl/annotation/8dpl_L_VL.ann | sabdab_dataset/8dpl/imgt/8dpl_K_H.ann | sabdab_dataset/8dpl/imgt/8dpl_L_L.ann | sabdab_dataset/8dpl/sequence/8dpl_raw.pdb | sabdab_dataset/8dpl/sequence/8dpl_K_VH.fa | sabdab_dataset/8dpl/sequence/8dpl_L_VL.fa | sabdab_dataset/8dpl/structure/8dpl.pdb | sabdab_dataset/8dpl/structure/chothia/8dpl.pdb | false | false | train |
8dpl | O | o | 0 | E | protein | null | glycoprotein gp2 | VIRAL PROTEIN/Immune System | 07/19/23 | Structure of EBOV GP lacking the mucin-like domain with 2.1.1D5 scFv and 6D6 scFv bound | Ebola virus - Mayinga, Zaire, 1976; Homo sapiens; Mus musculus | mus musculus | null | ebola virus - mayinga, zaire, 1976 | Yu, X., Saphire, E.O. | 2.53 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dpl/abangle/8dpl.abangle | sabdab_dataset/8dpl/annotation/8dpl_O_VH.ann | sabdab_dataset/8dpl/annotation/8dpl_O_VL.ann | sabdab_dataset/8dpl/imgt/8dpl_O_H.ann | sabdab_dataset/8dpl/imgt/8dpl_O_L.ann | sabdab_dataset/8dpl/sequence/8dpl_raw.pdb | sabdab_dataset/8dpl/sequence/8dpl_O_VH.fa | sabdab_dataset/8dpl/sequence/8dpl_O_VL.fa | sabdab_dataset/8dpl/structure/8dpl.pdb | sabdab_dataset/8dpl/structure/chothia/8dpl.pdb | false | false | train |
8dpm | C | c | 0 | L | protein | null | glycoprotein gp2 | VIRAL PROTEIN/Immune System | 07/19/23 | Structure of EBOV GP lacking the mucin-like domain with 9.20.1A2 Fab and 6D6 scFv bound | Ebola virus - Mayinga, Zaire, 1976; Homo sapiens; Mus musculus | mus musculus | null | ebola virus - mayinga, zaire, 1976 | Yu, X., Saphire, E.O. | 3.0 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dpm/abangle/8dpm.abangle | sabdab_dataset/8dpm/annotation/8dpm_C_VH.ann | sabdab_dataset/8dpm/annotation/8dpm_C_VL.ann | sabdab_dataset/8dpm/imgt/8dpm_C_H.ann | sabdab_dataset/8dpm/imgt/8dpm_C_L.ann | sabdab_dataset/8dpm/sequence/8dpm_raw.pdb | sabdab_dataset/8dpm/sequence/8dpm_C_VH.fa | sabdab_dataset/8dpm/sequence/8dpm_C_VL.fa | sabdab_dataset/8dpm/structure/8dpm.pdb | sabdab_dataset/8dpm/structure/chothia/8dpm.pdb | false | false | train |
8dpm | D | E | 0 | A | protein | null | glycoprotein gp1 | VIRAL PROTEIN/Immune System | 07/19/23 | Structure of EBOV GP lacking the mucin-like domain with 9.20.1A2 Fab and 6D6 scFv bound | Ebola virus - Mayinga, Zaire, 1976; Homo sapiens; Mus musculus | homo sapiens | homo sapiens | ebola virus - mayinga, zaire, 1976 | Yu, X., Saphire, E.O. | 3.0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dpm/abangle/8dpm.abangle | sabdab_dataset/8dpm/annotation/8dpm_D_VH.ann | sabdab_dataset/8dpm/annotation/8dpm_E_VL.ann | sabdab_dataset/8dpm/imgt/8dpm_D_H.ann | sabdab_dataset/8dpm/imgt/8dpm_E_L.ann | sabdab_dataset/8dpm/sequence/8dpm_raw.pdb | sabdab_dataset/8dpm/sequence/8dpm_D_VH.fa | sabdab_dataset/8dpm/sequence/8dpm_E_VL.fa | sabdab_dataset/8dpm/structure/8dpm.pdb | sabdab_dataset/8dpm/structure/chothia/8dpm.pdb | false | false | test |
8dpm | H | h | 0 | B | protein | null | glycoprotein gp2 | VIRAL PROTEIN/Immune System | 07/19/23 | Structure of EBOV GP lacking the mucin-like domain with 9.20.1A2 Fab and 6D6 scFv bound | Ebola virus - Mayinga, Zaire, 1976; Homo sapiens; Mus musculus | mus musculus | null | ebola virus - mayinga, zaire, 1976 | Yu, X., Saphire, E.O. | 3.0 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dpm/abangle/8dpm.abangle | sabdab_dataset/8dpm/annotation/8dpm_H_VH.ann | sabdab_dataset/8dpm/annotation/8dpm_H_VL.ann | sabdab_dataset/8dpm/imgt/8dpm_H_H.ann | sabdab_dataset/8dpm/imgt/8dpm_H_L.ann | sabdab_dataset/8dpm/sequence/8dpm_raw.pdb | sabdab_dataset/8dpm/sequence/8dpm_H_VH.fa | sabdab_dataset/8dpm/sequence/8dpm_H_VL.fa | sabdab_dataset/8dpm/structure/8dpm.pdb | sabdab_dataset/8dpm/structure/chothia/8dpm.pdb | false | false | train |
8dpm | I | J | 0 | F | protein | null | glycoprotein gp1 | VIRAL PROTEIN/Immune System | 07/19/23 | Structure of EBOV GP lacking the mucin-like domain with 9.20.1A2 Fab and 6D6 scFv bound | Ebola virus - Mayinga, Zaire, 1976; Homo sapiens; Mus musculus | homo sapiens | homo sapiens | ebola virus - mayinga, zaire, 1976 | Yu, X., Saphire, E.O. | 3.0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dpm/abangle/8dpm.abangle | sabdab_dataset/8dpm/annotation/8dpm_I_VH.ann | sabdab_dataset/8dpm/annotation/8dpm_J_VL.ann | sabdab_dataset/8dpm/imgt/8dpm_I_H.ann | sabdab_dataset/8dpm/imgt/8dpm_J_L.ann | sabdab_dataset/8dpm/sequence/8dpm_raw.pdb | sabdab_dataset/8dpm/sequence/8dpm_I_VH.fa | sabdab_dataset/8dpm/sequence/8dpm_J_VL.fa | sabdab_dataset/8dpm/structure/8dpm.pdb | sabdab_dataset/8dpm/structure/chothia/8dpm.pdb | false | false | validation |
8dpm | M | m | 0 | G | protein | null | glycoprotein gp2 | VIRAL PROTEIN/Immune System | 07/19/23 | Structure of EBOV GP lacking the mucin-like domain with 9.20.1A2 Fab and 6D6 scFv bound | Ebola virus - Mayinga, Zaire, 1976; Homo sapiens; Mus musculus | mus musculus | null | ebola virus - mayinga, zaire, 1976 | Yu, X., Saphire, E.O. | 3.0 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dpm/abangle/8dpm.abangle | sabdab_dataset/8dpm/annotation/8dpm_M_VH.ann | sabdab_dataset/8dpm/annotation/8dpm_M_VL.ann | sabdab_dataset/8dpm/imgt/8dpm_M_H.ann | sabdab_dataset/8dpm/imgt/8dpm_M_L.ann | sabdab_dataset/8dpm/sequence/8dpm_raw.pdb | sabdab_dataset/8dpm/sequence/8dpm_M_VH.fa | sabdab_dataset/8dpm/sequence/8dpm_M_VL.fa | sabdab_dataset/8dpm/structure/8dpm.pdb | sabdab_dataset/8dpm/structure/chothia/8dpm.pdb | false | false | train |
8dpm | N | O | 0 | K | protein | null | glycoprotein gp1 | VIRAL PROTEIN/Immune System | 07/19/23 | Structure of EBOV GP lacking the mucin-like domain with 9.20.1A2 Fab and 6D6 scFv bound | Ebola virus - Mayinga, Zaire, 1976; Homo sapiens; Mus musculus | homo sapiens | homo sapiens | ebola virus - mayinga, zaire, 1976 | Yu, X., Saphire, E.O. | 3.0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dpm/abangle/8dpm.abangle | sabdab_dataset/8dpm/annotation/8dpm_N_VH.ann | sabdab_dataset/8dpm/annotation/8dpm_O_VL.ann | sabdab_dataset/8dpm/imgt/8dpm_N_H.ann | sabdab_dataset/8dpm/imgt/8dpm_O_L.ann | sabdab_dataset/8dpm/sequence/8dpm_raw.pdb | sabdab_dataset/8dpm/sequence/8dpm_N_VH.fa | sabdab_dataset/8dpm/sequence/8dpm_O_VL.fa | sabdab_dataset/8dpm/structure/8dpm.pdb | sabdab_dataset/8dpm/structure/chothia/8dpm.pdb | false | false | test |
8dpz | F | G | 0 | B | protein | null | spike protein s1 | VIRAL PROTEIN/Immune System | 08/02/23 | Local refinement of SARS-CoV-2 vaccine induced antibody DH1338 bound to SARS-CoV-2 HexaPro RBD Spike ectodomain | Macaca mulatta; Severe acute respiratory syndrome coronavirus 2 | macaca mulatta | macaca mulatta | severe acute respiratory syndrome coronavirus2 | Stalls, V., May, A.J., Acharya, P. | 3.38 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8dpz/abangle/8dpz.abangle | sabdab_dataset/8dpz/annotation/8dpz_F_VH.ann | sabdab_dataset/8dpz/annotation/8dpz_G_VL.ann | sabdab_dataset/8dpz/imgt/8dpz_F_H.ann | sabdab_dataset/8dpz/imgt/8dpz_G_L.ann | sabdab_dataset/8dpz/sequence/8dpz_raw.pdb | sabdab_dataset/8dpz/sequence/8dpz_F_VH.fa | sabdab_dataset/8dpz/sequence/8dpz_G_VL.fa | sabdab_dataset/8dpz/structure/8dpz.pdb | sabdab_dataset/8dpz/structure/chothia/8dpz.pdb | false | false | train |
8dqu | A | null | 0 | C | protein | null | non-structural protein 9 | VIRAL PROTEIN | 02/08/23 | Nanobody bound SARS-CoV-2 Nsp9 | Lama glama; Severe acute respiratory syndrome coronavirus 2 | lama glama | null | severe acute respiratory syndrome coronavirus2 | Littler, D.R., Gully, B.S., Rossjohn, J. | 2.45003 | X-RAY DIFFRACTION | 0.229 | 0.203 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8dqu/annotation/8dqu_A_VH.ann | null | sabdab_dataset/8dqu/imgt/8dqu_A_H.ann | null | sabdab_dataset/8dqu/sequence/8dqu_raw.pdb | sabdab_dataset/8dqu/sequence/8dqu_A_VH.fa | null | sabdab_dataset/8dqu/structure/8dqu.pdb | sabdab_dataset/8dqu/structure/chothia/8dqu.pdb | true | true | train |
8dqu | B | null | 0 | F | protein | null | non-structural protein 9 | VIRAL PROTEIN | 02/08/23 | Nanobody bound SARS-CoV-2 Nsp9 | Lama glama; Severe acute respiratory syndrome coronavirus 2 | lama glama | null | severe acute respiratory syndrome coronavirus2 | Littler, D.R., Gully, B.S., Rossjohn, J. | 2.45003 | X-RAY DIFFRACTION | 0.229 | 0.203 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8dqu/annotation/8dqu_B_VH.ann | null | sabdab_dataset/8dqu/imgt/8dqu_B_H.ann | null | sabdab_dataset/8dqu/sequence/8dqu_raw.pdb | sabdab_dataset/8dqu/sequence/8dqu_B_VH.fa | null | sabdab_dataset/8dqu/structure/8dqu.pdb | sabdab_dataset/8dqu/structure/chothia/8dqu.pdb | true | false | train |
8ds5 | C | B | 0 | A | protein | null | cd27 antigen | IMMUNE SYSTEM | 09/28/22 | X-ray structure of the MK5890 Fab - CD27 antibody-antigen complex | Homo sapiens; Mus musculus | mus musculus | mus musculus | homo sapiens | Fischmann, T.O. | 1.926 | X-RAY DIFFRACTION | 0.225 | 0.209 | false | true | IGHV9 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8ds5/abangle/8ds5.abangle | sabdab_dataset/8ds5/annotation/8ds5_C_VH.ann | sabdab_dataset/8ds5/annotation/8ds5_B_VL.ann | sabdab_dataset/8ds5/imgt/8ds5_C_H.ann | sabdab_dataset/8ds5/imgt/8ds5_B_L.ann | sabdab_dataset/8ds5/sequence/8ds5_raw.pdb | sabdab_dataset/8ds5/sequence/8ds5_C_VH.fa | sabdab_dataset/8ds5/sequence/8ds5_B_VL.fa | sabdab_dataset/8ds5/structure/8ds5.pdb | sabdab_dataset/8ds5/structure/chothia/8ds5.pdb | true | false | test |
8ds7 | H | L | 0 | M | peptide | null | acnliveghc peptide | ANTITUMOR PROTEIN | 02/07/24 | Tumor-activated antibody derivatives targeting CTLA4 | Mus musculus; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | phage 13 | Johnson, P., Williams, J. | 1.88 | X-RAY DIFFRACTION | 0.191 | 0.156 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8ds7/abangle/8ds7.abangle | sabdab_dataset/8ds7/annotation/8ds7_H_VH.ann | sabdab_dataset/8ds7/annotation/8ds7_L_VL.ann | sabdab_dataset/8ds7/imgt/8ds7_H_H.ann | sabdab_dataset/8ds7/imgt/8ds7_L_L.ann | sabdab_dataset/8ds7/sequence/8ds7_raw.pdb | sabdab_dataset/8ds7/sequence/8ds7_H_VH.fa | sabdab_dataset/8ds7/sequence/8ds7_L_VL.fa | sabdab_dataset/8ds7/structure/8ds7.pdb | sabdab_dataset/8ds7/structure/chothia/8ds7.pdb | false | false | train |
8dt3 | H | L | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 08/03/22 | Cryo-EM structure of spike binding to Fab of neutralizing antibody (locally refined) | Mus musculus; Severe acute respiratory syndrome coronavirus 2 | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Sun, P.C., Fang, Y., Bai, X.C., Chen, Z.J. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV10 | Kappa | null | null | null | null | null | sabdab_dataset/8dt3/abangle/8dt3.abangle | sabdab_dataset/8dt3/annotation/8dt3_H_VH.ann | sabdab_dataset/8dt3/annotation/8dt3_L_VL.ann | sabdab_dataset/8dt3/imgt/8dt3_H_H.ann | sabdab_dataset/8dt3/imgt/8dt3_L_L.ann | sabdab_dataset/8dt3/sequence/8dt3_raw.pdb | sabdab_dataset/8dt3/sequence/8dt3_H_VH.fa | sabdab_dataset/8dt3/sequence/8dt3_L_VL.fa | sabdab_dataset/8dt3/structure/8dt3.pdb | sabdab_dataset/8dt3/structure/chothia/8dt3.pdb | false | false | train |
8dt8 | D | null | 0 | A | B | protein | protein | NA | NA | spike glycoprotein | spike glycoprotein | VIRAL PROTEIN | 06/14/23 | LM18/Nb136 bispecific tetra-nanobody immunoglobulin in complex with SARS-CoV-2-6P-Mut7 S protein (focused refinement) | Severe acute respiratory syndrome coronavirus 2; synthetic construct | synthetic construct | null | severe acute respiratory syndrome coronavirus2 | severe acute respiratory syndrome coronavirus2 | Ozorowski, G., Turner, H.L., Ward, A.B. | 3.34 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null | null | sabdab_dataset/8dt8/annotation/8dt8_D_VH.ann | null | sabdab_dataset/8dt8/imgt/8dt8_D_H.ann | null | sabdab_dataset/8dt8/sequence/8dt8_raw.pdb | sabdab_dataset/8dt8/sequence/8dt8_D_VH.fa | null | sabdab_dataset/8dt8/structure/8dt8.pdb | sabdab_dataset/8dt8/structure/chothia/8dt8.pdb | false | false | train |
8dt8 | H | null | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 06/14/23 | LM18/Nb136 bispecific tetra-nanobody immunoglobulin in complex with SARS-CoV-2-6P-Mut7 S protein (focused refinement) | Severe acute respiratory syndrome coronavirus 2; synthetic construct | synthetic construct | null | severe acute respiratory syndrome coronavirus2 | Ozorowski, G., Turner, H.L., Ward, A.B. | 3.34 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null | null | sabdab_dataset/8dt8/annotation/8dt8_H_VH.ann | null | sabdab_dataset/8dt8/imgt/8dt8_H_H.ann | null | sabdab_dataset/8dt8/sequence/8dt8_raw.pdb | sabdab_dataset/8dt8/sequence/8dt8_H_VH.fa | null | sabdab_dataset/8dt8/structure/8dt8.pdb | sabdab_dataset/8dt8/structure/chothia/8dt8.pdb | false | false | train |
8dtk | C | B | 0 | A | protein | null | spike protein s1 | Viral Protein/Immune System | 08/02/23 | Structure of RBD directed antibody DH1047 in complex with SARS-CoV-2 spike: Local refinement of RBD-Fab interace | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | May, A.J., Manne, K., Acharya, P. | 3.77 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null | sabdab_dataset/8dtk/abangle/8dtk.abangle | sabdab_dataset/8dtk/annotation/8dtk_C_VH.ann | sabdab_dataset/8dtk/annotation/8dtk_B_VL.ann | sabdab_dataset/8dtk/imgt/8dtk_C_H.ann | sabdab_dataset/8dtk/imgt/8dtk_B_L.ann | sabdab_dataset/8dtk/sequence/8dtk_raw.pdb | sabdab_dataset/8dtk/sequence/8dtk_C_VH.fa | sabdab_dataset/8dtk/sequence/8dtk_B_VL.fa | sabdab_dataset/8dtk/structure/8dtk.pdb | sabdab_dataset/8dtk/structure/chothia/8dtk.pdb | false | false | train |
8dtn | A | null | 0 | B | peptide | null | b-cell lymphoma/leukemia 11a | DNA BINDING PROTEIN | 02/01/23 | The complex of nanobody 6101 with BCL11A ZF6 | Homo sapiens; Lama glama | lama glama | null | homo sapiens | Yin, M., Tenglin, K., Zhai, L., Dassama, L.M., Orkin, S.H. | 2.199 | X-RAY DIFFRACTION | 0.232 | 0.195 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8dtn/annotation/8dtn_A_VH.ann | null | sabdab_dataset/8dtn/imgt/8dtn_A_H.ann | null | sabdab_dataset/8dtn/sequence/8dtn_raw.pdb | sabdab_dataset/8dtn/sequence/8dtn_A_VH.fa | null | sabdab_dataset/8dtn/structure/8dtn.pdb | sabdab_dataset/8dtn/structure/chothia/8dtn.pdb | true | true | train |
8dtn | C | null | 0 | D | peptide | null | b-cell lymphoma/leukemia 11a | DNA BINDING PROTEIN | 02/01/23 | The complex of nanobody 6101 with BCL11A ZF6 | Homo sapiens; Lama glama | lama glama | null | homo sapiens | Yin, M., Tenglin, K., Zhai, L., Dassama, L.M., Orkin, S.H. | 2.199 | X-RAY DIFFRACTION | 0.232 | 0.195 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8dtn/annotation/8dtn_C_VH.ann | null | sabdab_dataset/8dtn/imgt/8dtn_C_H.ann | null | sabdab_dataset/8dtn/sequence/8dtn_raw.pdb | sabdab_dataset/8dtn/sequence/8dtn_C_VH.fa | null | sabdab_dataset/8dtn/structure/8dtn.pdb | sabdab_dataset/8dtn/structure/chothia/8dtn.pdb | true | false | test |
8dtn | E | null | 0 | F | peptide | null | b-cell lymphoma/leukemia 11a | DNA BINDING PROTEIN | 02/01/23 | The complex of nanobody 6101 with BCL11A ZF6 | Homo sapiens; Lama glama | lama glama | null | homo sapiens | Yin, M., Tenglin, K., Zhai, L., Dassama, L.M., Orkin, S.H. | 2.199 | X-RAY DIFFRACTION | 0.232 | 0.195 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8dtn/annotation/8dtn_E_VH.ann | null | sabdab_dataset/8dtn/imgt/8dtn_E_H.ann | null | sabdab_dataset/8dtn/sequence/8dtn_raw.pdb | sabdab_dataset/8dtn/sequence/8dtn_E_VH.fa | null | sabdab_dataset/8dtn/structure/8dtn.pdb | sabdab_dataset/8dtn/structure/chothia/8dtn.pdb | true | false | train |
8dtn | G | null | 0 | H | peptide | null | b-cell lymphoma/leukemia 11a | DNA BINDING PROTEIN | 02/01/23 | The complex of nanobody 6101 with BCL11A ZF6 | Homo sapiens; Lama glama | lama glama | null | homo sapiens | Yin, M., Tenglin, K., Zhai, L., Dassama, L.M., Orkin, S.H. | 2.199 | X-RAY DIFFRACTION | 0.232 | 0.195 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8dtn/annotation/8dtn_G_VH.ann | null | sabdab_dataset/8dtn/imgt/8dtn_G_H.ann | null | sabdab_dataset/8dtn/sequence/8dtn_raw.pdb | sabdab_dataset/8dtn/sequence/8dtn_G_VH.fa | null | sabdab_dataset/8dtn/structure/8dtn.pdb | sabdab_dataset/8dtn/structure/chothia/8dtn.pdb | true | false | validation |
8dto | C | D | 0 | A | protein | null | ch848.3.d0949.10.17chim.6r.ds.sosip.664_n133d_n138t gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 04/19/23 | Vaccine elicited Antibody MU89 bound to CH848.D949.10.17_N133D_N138T.DS.SOSIP.664 HIV-1 Env trimer | Human immunodeficiency virus; Human immunodeficiency virus 1; Mus musculus | mus musculus | mus musculus | human immunodeficiency virus 1 | Stalls, V., Acharya, P. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null | sabdab_dataset/8dto/abangle/8dto.abangle | sabdab_dataset/8dto/annotation/8dto_C_VH.ann | sabdab_dataset/8dto/annotation/8dto_D_VL.ann | sabdab_dataset/8dto/imgt/8dto_C_H.ann | sabdab_dataset/8dto/imgt/8dto_D_L.ann | sabdab_dataset/8dto/sequence/8dto_raw.pdb | sabdab_dataset/8dto/sequence/8dto_C_VH.fa | sabdab_dataset/8dto/sequence/8dto_D_VL.fa | sabdab_dataset/8dto/structure/8dto.pdb | sabdab_dataset/8dto/structure/chothia/8dto.pdb | false | false | train |
8dto | G | H | 0 | E | protein | null | ch848.3.d0949.10.17chim.6r.ds.sosip.664_n133d_n138t gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 04/19/23 | Vaccine elicited Antibody MU89 bound to CH848.D949.10.17_N133D_N138T.DS.SOSIP.664 HIV-1 Env trimer | Human immunodeficiency virus; Human immunodeficiency virus 1; Mus musculus | mus musculus | mus musculus | human immunodeficiency virus 1 | Stalls, V., Acharya, P. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null | sabdab_dataset/8dto/abangle/8dto.abangle | sabdab_dataset/8dto/annotation/8dto_G_VH.ann | sabdab_dataset/8dto/annotation/8dto_H_VL.ann | sabdab_dataset/8dto/imgt/8dto_G_H.ann | sabdab_dataset/8dto/imgt/8dto_H_L.ann | sabdab_dataset/8dto/sequence/8dto_raw.pdb | sabdab_dataset/8dto/sequence/8dto_G_VH.fa | sabdab_dataset/8dto/sequence/8dto_H_VL.fa | sabdab_dataset/8dto/structure/8dto.pdb | sabdab_dataset/8dto/structure/chothia/8dto.pdb | false | false | train |
8dto | K | L | 0 | I | protein | null | ch848.3.d0949.10.17chim.6r.ds.sosip.664_n133d_n138t gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 04/19/23 | Vaccine elicited Antibody MU89 bound to CH848.D949.10.17_N133D_N138T.DS.SOSIP.664 HIV-1 Env trimer | Human immunodeficiency virus; Human immunodeficiency virus 1; Mus musculus | mus musculus | mus musculus | human immunodeficiency virus 1 | Stalls, V., Acharya, P. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null | sabdab_dataset/8dto/abangle/8dto.abangle | sabdab_dataset/8dto/annotation/8dto_K_VH.ann | sabdab_dataset/8dto/annotation/8dto_L_VL.ann | sabdab_dataset/8dto/imgt/8dto_K_H.ann | sabdab_dataset/8dto/imgt/8dto_L_L.ann | sabdab_dataset/8dto/sequence/8dto_raw.pdb | sabdab_dataset/8dto/sequence/8dto_K_VH.fa | sabdab_dataset/8dto/sequence/8dto_L_VL.fa | sabdab_dataset/8dto/structure/8dto.pdb | sabdab_dataset/8dto/structure/chothia/8dto.pdb | false | false | train |
8dtr | A | B | 0 | G | peptide | null | spike protein s2' stem helix peptide | IMMUNE SYSTEM | 11/23/22 | Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with neutralizing antibody COV30-14 | Homo sapiens; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Lee, C.C.D., Lin, T.H., Wilson, I.A. | 1.5 | X-RAY DIFFRACTION | 0.222 | 0.198 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8dtr/abangle/8dtr.abangle | sabdab_dataset/8dtr/annotation/8dtr_A_VH.ann | sabdab_dataset/8dtr/annotation/8dtr_B_VL.ann | sabdab_dataset/8dtr/imgt/8dtr_A_H.ann | sabdab_dataset/8dtr/imgt/8dtr_B_L.ann | sabdab_dataset/8dtr/sequence/8dtr_raw.pdb | sabdab_dataset/8dtr/sequence/8dtr_A_VH.fa | sabdab_dataset/8dtr/sequence/8dtr_B_VL.fa | sabdab_dataset/8dtr/structure/8dtr.pdb | sabdab_dataset/8dtr/structure/chothia/8dtr.pdb | true | false | train |
8dtr | E | F | 0 | J | peptide | null | spike protein s2' stem helix peptide | IMMUNE SYSTEM | 11/23/22 | Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with neutralizing antibody COV30-14 | Homo sapiens; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Lee, C.C.D., Lin, T.H., Wilson, I.A. | 1.5 | X-RAY DIFFRACTION | 0.222 | 0.198 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8dtr/abangle/8dtr.abangle | sabdab_dataset/8dtr/annotation/8dtr_E_VH.ann | sabdab_dataset/8dtr/annotation/8dtr_F_VL.ann | sabdab_dataset/8dtr/imgt/8dtr_E_H.ann | sabdab_dataset/8dtr/imgt/8dtr_F_L.ann | sabdab_dataset/8dtr/sequence/8dtr_raw.pdb | sabdab_dataset/8dtr/sequence/8dtr_E_VH.fa | sabdab_dataset/8dtr/sequence/8dtr_F_VL.fa | sabdab_dataset/8dtr/structure/8dtr.pdb | sabdab_dataset/8dtr/structure/chothia/8dtr.pdb | true | false | train |
8dtt | A | B | 0 | G | peptide | null | spike protein s2' stem helix peptide | IMMUNE SYSTEM | 11/23/22 | Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with neutralizing antibody COV93-03 | Homo sapiens; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Lee, C.C.D., Lin, T.H., Wilson, I.A. | 1.75 | X-RAY DIFFRACTION | 0.225 | 0.195 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8dtt/abangle/8dtt.abangle | sabdab_dataset/8dtt/annotation/8dtt_A_VH.ann | sabdab_dataset/8dtt/annotation/8dtt_B_VL.ann | sabdab_dataset/8dtt/imgt/8dtt_A_H.ann | sabdab_dataset/8dtt/imgt/8dtt_B_L.ann | sabdab_dataset/8dtt/sequence/8dtt_raw.pdb | sabdab_dataset/8dtt/sequence/8dtt_A_VH.fa | sabdab_dataset/8dtt/sequence/8dtt_B_VL.fa | sabdab_dataset/8dtt/structure/8dtt.pdb | sabdab_dataset/8dtt/structure/chothia/8dtt.pdb | true | false | train |
8dtt | E | F | 0 | J | peptide | null | spike protein s2' stem helix peptide | IMMUNE SYSTEM | 11/23/22 | Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with neutralizing antibody COV93-03 | Homo sapiens; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Lee, C.C.D., Lin, T.H., Wilson, I.A. | 1.75 | X-RAY DIFFRACTION | 0.225 | 0.195 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8dtt/abangle/8dtt.abangle | sabdab_dataset/8dtt/annotation/8dtt_E_VH.ann | sabdab_dataset/8dtt/annotation/8dtt_F_VL.ann | sabdab_dataset/8dtt/imgt/8dtt_E_H.ann | sabdab_dataset/8dtt/imgt/8dtt_F_L.ann | sabdab_dataset/8dtt/sequence/8dtt_raw.pdb | sabdab_dataset/8dtt/sequence/8dtt_E_VH.fa | sabdab_dataset/8dtt/sequence/8dtt_F_VL.fa | sabdab_dataset/8dtt/structure/8dtt.pdb | sabdab_dataset/8dtt/structure/chothia/8dtt.pdb | true | false | train |
8dtu | A | null | 0 | C | B | peptide | peptide | NA | NA | b-cell lymphoma/leukemia 11a | nanobody 5344n74d | DNA BINDING PROTEIN | 02/01/23 | The complex of nanobody 5344N74D with BCL11A ZF6. | Homo sapiens; Lama glama | lama glama | null | homo sapiens | lama glama | Yin, M., Tenglin, K., Zhai, L., Dassama, L.M., Orkin, S.H. | 2.447 | X-RAY DIFFRACTION | 0.288 | 0.261 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/8dtu/annotation/8dtu_A_VH.ann | null | sabdab_dataset/8dtu/imgt/8dtu_A_H.ann | null | sabdab_dataset/8dtu/sequence/8dtu_raw.pdb | sabdab_dataset/8dtu/sequence/8dtu_A_VH.fa | null | sabdab_dataset/8dtu/structure/8dtu.pdb | sabdab_dataset/8dtu/structure/chothia/8dtu.pdb | true | true | validation |
8dtx | A | B | 0 | G | peptide | null | spike protein s2' stem helix peptide | IMMUNE SYSTEM | 11/23/22 | Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with neutralizing antibody COV89-22 | Homo sapiens; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Lin, T.H., Lee, C.C.D., Wilson, I.A. | 1.6 | X-RAY DIFFRACTION | 0.210 | 0.185 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8dtx/abangle/8dtx.abangle | sabdab_dataset/8dtx/annotation/8dtx_A_VH.ann | sabdab_dataset/8dtx/annotation/8dtx_B_VL.ann | sabdab_dataset/8dtx/imgt/8dtx_A_H.ann | sabdab_dataset/8dtx/imgt/8dtx_B_L.ann | sabdab_dataset/8dtx/sequence/8dtx_raw.pdb | sabdab_dataset/8dtx/sequence/8dtx_A_VH.fa | sabdab_dataset/8dtx/sequence/8dtx_B_VL.fa | sabdab_dataset/8dtx/structure/8dtx.pdb | sabdab_dataset/8dtx/structure/chothia/8dtx.pdb | true | false | train |
8dtx | H | L | 0 | I | peptide | null | spike protein s2' stem helix peptide | IMMUNE SYSTEM | 11/23/22 | Crystal structure of SARS-CoV-2 spike stem helix peptide in complex with neutralizing antibody COV89-22 | Homo sapiens; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Lin, T.H., Lee, C.C.D., Wilson, I.A. | 1.6 | X-RAY DIFFRACTION | 0.210 | 0.185 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8dtx/abangle/8dtx.abangle | sabdab_dataset/8dtx/annotation/8dtx_H_VH.ann | sabdab_dataset/8dtx/annotation/8dtx_L_VL.ann | sabdab_dataset/8dtx/imgt/8dtx_H_H.ann | sabdab_dataset/8dtx/imgt/8dtx_L_L.ann | sabdab_dataset/8dtx/sequence/8dtx_raw.pdb | sabdab_dataset/8dtx/sequence/8dtx_H_VH.fa | sabdab_dataset/8dtx/sequence/8dtx_L_VL.fa | sabdab_dataset/8dtx/structure/8dtx.pdb | sabdab_dataset/8dtx/structure/chothia/8dtx.pdb | true | false | train |
8dua | D | E | 0 | A | C | protein | protein | NA | NA | envelope glycoprotein gp41 | envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 10/26/22 | SIV E660.CR54 SOS-2P Env Trimer with ITS92.02 | Macaca mulatta; Simian immunodeficiency virus | macaca mulatta | macaca mulatta | simian immunodeficiency virus | simian immunodeficiency virus | Gorman, J., Kwong, P.D. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dua/abangle/8dua.abangle | sabdab_dataset/8dua/annotation/8dua_D_VH.ann | sabdab_dataset/8dua/annotation/8dua_E_VL.ann | sabdab_dataset/8dua/imgt/8dua_D_H.ann | sabdab_dataset/8dua/imgt/8dua_E_L.ann | sabdab_dataset/8dua/sequence/8dua_raw.pdb | sabdab_dataset/8dua/sequence/8dua_D_VH.fa | sabdab_dataset/8dua/sequence/8dua_E_VL.fa | sabdab_dataset/8dua/structure/8dua.pdb | sabdab_dataset/8dua/structure/chothia/8dua.pdb | false | false | train |
8dua | H | L | 0 | B | G | protein | protein | NA | NA | envelope glycoprotein gp41 | envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 10/26/22 | SIV E660.CR54 SOS-2P Env Trimer with ITS92.02 | Macaca mulatta; Simian immunodeficiency virus | macaca mulatta | macaca mulatta | simian immunodeficiency virus | simian immunodeficiency virus | Gorman, J., Kwong, P.D. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dua/abangle/8dua.abangle | sabdab_dataset/8dua/annotation/8dua_H_VH.ann | sabdab_dataset/8dua/annotation/8dua_L_VL.ann | sabdab_dataset/8dua/imgt/8dua_H_H.ann | sabdab_dataset/8dua/imgt/8dua_L_L.ann | sabdab_dataset/8dua/sequence/8dua_raw.pdb | sabdab_dataset/8dua/sequence/8dua_H_VH.fa | sabdab_dataset/8dua/sequence/8dua_L_VL.fa | sabdab_dataset/8dua/structure/8dua.pdb | sabdab_dataset/8dua/structure/chothia/8dua.pdb | false | false | train |
8dua | J | K | 0 | F | I | protein | protein | NA | NA | envelope glycoprotein gp41 | envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 10/26/22 | SIV E660.CR54 SOS-2P Env Trimer with ITS92.02 | Macaca mulatta; Simian immunodeficiency virus | macaca mulatta | macaca mulatta | simian immunodeficiency virus | simian immunodeficiency virus | Gorman, J., Kwong, P.D. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dua/abangle/8dua.abangle | sabdab_dataset/8dua/annotation/8dua_J_VH.ann | sabdab_dataset/8dua/annotation/8dua_K_VL.ann | sabdab_dataset/8dua/imgt/8dua_J_H.ann | sabdab_dataset/8dua/imgt/8dua_K_L.ann | sabdab_dataset/8dua/sequence/8dua_raw.pdb | sabdab_dataset/8dua/sequence/8dua_J_VH.fa | sabdab_dataset/8dua/sequence/8dua_K_VL.fa | sabdab_dataset/8dua/structure/8dua.pdb | sabdab_dataset/8dua/structure/chothia/8dua.pdb | false | false | train |
8dul | H | L | 0 | A | K | protein | protein | NA | NA | spike glycoprotein e1 | spike glycoprotein e2 | IMMUNE SYSTEM | 07/05/23 | Cryo-EM Structure of Antibody SKT05 in complex with Western Equine Encephalitis Virus spike (local refinement from VLP particles) | Macaca fascicularis; Western equine encephalitis virus | macaca fascicularis | macaca fascicularis | western equine encephalitis virus | western equine encephalitis virus | Cerutti, G., Verardi, R., Roederer, M., Shapiro, L. | 4.17 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dul/abangle/8dul.abangle | sabdab_dataset/8dul/annotation/8dul_H_VH.ann | sabdab_dataset/8dul/annotation/8dul_L_VL.ann | sabdab_dataset/8dul/imgt/8dul_H_H.ann | sabdab_dataset/8dul/imgt/8dul_L_L.ann | sabdab_dataset/8dul/sequence/8dul_raw.pdb | sabdab_dataset/8dul/sequence/8dul_H_VH.fa | sabdab_dataset/8dul/sequence/8dul_L_VL.fa | sabdab_dataset/8dul/structure/8dul.pdb | sabdab_dataset/8dul/structure/chothia/8dul.pdb | false | false | train |
8dun | H | L | 0 | G | protein | null | spike glycoprotein e2 | IMMUNE SYSTEM | 07/05/23 | Cryo-EM Structure of Antibody SKW11 in complex with Western Equine Encephalitis Virus spike (local refinement from VLP particles) | Macaca fascicularis; Western equine encephalitis virus | macaca fascicularis | macaca fascicularis | western equine encephalitis virus | Cerutti, G., Verardi, R., Roederer, M., Shapiro, L. | 5.84 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dun/abangle/8dun.abangle | sabdab_dataset/8dun/annotation/8dun_H_VH.ann | sabdab_dataset/8dun/annotation/8dun_L_VL.ann | sabdab_dataset/8dun/imgt/8dun_H_H.ann | sabdab_dataset/8dun/imgt/8dun_L_L.ann | sabdab_dataset/8dun/sequence/8dun_raw.pdb | sabdab_dataset/8dun/sequence/8dun_H_VH.fa | sabdab_dataset/8dun/sequence/8dun_L_VL.fa | sabdab_dataset/8dun/structure/8dun.pdb | sabdab_dataset/8dun/structure/chothia/8dun.pdb | false | false | train |
8dun | I | M | 0 | K | protein | null | spike glycoprotein e2 | IMMUNE SYSTEM | 07/05/23 | Cryo-EM Structure of Antibody SKW11 in complex with Western Equine Encephalitis Virus spike (local refinement from VLP particles) | Macaca fascicularis; Western equine encephalitis virus | macaca fascicularis | macaca fascicularis | western equine encephalitis virus | Cerutti, G., Verardi, R., Roederer, M., Shapiro, L. | 5.84 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dun/abangle/8dun.abangle | sabdab_dataset/8dun/annotation/8dun_I_VH.ann | sabdab_dataset/8dun/annotation/8dun_M_VL.ann | sabdab_dataset/8dun/imgt/8dun_I_H.ann | sabdab_dataset/8dun/imgt/8dun_M_L.ann | sabdab_dataset/8dun/sequence/8dun_raw.pdb | sabdab_dataset/8dun/sequence/8dun_I_VH.fa | sabdab_dataset/8dun/sequence/8dun_M_VL.fa | sabdab_dataset/8dun/structure/8dun.pdb | sabdab_dataset/8dun/structure/chothia/8dun.pdb | false | false | train |
8dun | N | O | 0 | B | protein | null | spike glycoprotein e2 | IMMUNE SYSTEM | 07/05/23 | Cryo-EM Structure of Antibody SKW11 in complex with Western Equine Encephalitis Virus spike (local refinement from VLP particles) | Macaca fascicularis; Western equine encephalitis virus | macaca fascicularis | macaca fascicularis | western equine encephalitis virus | Cerutti, G., Verardi, R., Roederer, M., Shapiro, L. | 5.84 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dun/abangle/8dun.abangle | sabdab_dataset/8dun/annotation/8dun_N_VH.ann | sabdab_dataset/8dun/annotation/8dun_O_VL.ann | sabdab_dataset/8dun/imgt/8dun_N_H.ann | sabdab_dataset/8dun/imgt/8dun_O_L.ann | sabdab_dataset/8dun/sequence/8dun_raw.pdb | sabdab_dataset/8dun/sequence/8dun_N_VH.fa | sabdab_dataset/8dun/sequence/8dun_O_VL.fa | sabdab_dataset/8dun/structure/8dun.pdb | sabdab_dataset/8dun/structure/chothia/8dun.pdb | false | false | train |
8duz | A | B | 0 | F | peptide | null | mimetic peptide | IMMUNE SYSTEM | 07/05/23 | Protective antibody against gonococcal lipooligosaccharide bound to peptide mimetic | Mus musculus; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | bacteriophage sp. | Beernink, P.T., Beernink, B.P., Rice, P.A., Ram, S. | 1.65 | X-RAY DIFFRACTION | 0.234 | 0.189 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8duz/abangle/8duz.abangle | sabdab_dataset/8duz/annotation/8duz_A_VH.ann | sabdab_dataset/8duz/annotation/8duz_B_VL.ann | sabdab_dataset/8duz/imgt/8duz_A_H.ann | sabdab_dataset/8duz/imgt/8duz_B_L.ann | sabdab_dataset/8duz/sequence/8duz_raw.pdb | sabdab_dataset/8duz/sequence/8duz_A_VH.fa | sabdab_dataset/8duz/sequence/8duz_B_VL.fa | sabdab_dataset/8duz/structure/8duz.pdb | sabdab_dataset/8duz/structure/chothia/8duz.pdb | true | false | train |
8duz | C | D | 0 | E | peptide | null | mimetic peptide | IMMUNE SYSTEM | 07/05/23 | Protective antibody against gonococcal lipooligosaccharide bound to peptide mimetic | Mus musculus; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | bacteriophage sp. | Beernink, P.T., Beernink, B.P., Rice, P.A., Ram, S. | 1.65 | X-RAY DIFFRACTION | 0.234 | 0.189 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8duz/abangle/8duz.abangle | sabdab_dataset/8duz/annotation/8duz_C_VH.ann | sabdab_dataset/8duz/annotation/8duz_D_VL.ann | sabdab_dataset/8duz/imgt/8duz_C_H.ann | sabdab_dataset/8duz/imgt/8duz_D_L.ann | sabdab_dataset/8duz/sequence/8duz_raw.pdb | sabdab_dataset/8duz/sequence/8duz_C_VH.fa | sabdab_dataset/8duz/sequence/8duz_D_VL.fa | sabdab_dataset/8duz/structure/8duz.pdb | sabdab_dataset/8duz/structure/chothia/8duz.pdb | true | false | test |
8dv6 | C | L | 0 | B | protein | null | envelope protein e | VIRAL PROTEIN | 01/08/09 | Zika virus envelope protein structure in complex with a potent Human mAb | Homo sapiens; Zika virus ZIKV/Human/Cambodia/FSS13025/2010 | homo sapiens | homo sapiens | zika virus zikv/human/cambodia/fss13025/2010 | Cameron, A., Puhl, A.C., deSilva, A.M., Premkumar, L. | 3.38 | X-RAY DIFFRACTION | 0.259 | 0.232 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null | sabdab_dataset/8dv6/abangle/8dv6.abangle | sabdab_dataset/8dv6/annotation/8dv6_C_VH.ann | sabdab_dataset/8dv6/annotation/8dv6_L_VL.ann | sabdab_dataset/8dv6/imgt/8dv6_C_H.ann | sabdab_dataset/8dv6/imgt/8dv6_L_L.ann | sabdab_dataset/8dv6/sequence/8dv6_raw.pdb | sabdab_dataset/8dv6/sequence/8dv6_C_VH.fa | sabdab_dataset/8dv6/sequence/8dv6_L_VL.fa | sabdab_dataset/8dv6/structure/8dv6.pdb | sabdab_dataset/8dv6/structure/chothia/8dv6.pdb | true | false | train |
8dv6 | H | D | 0 | A | protein | null | envelope protein e | VIRAL PROTEIN | 01/08/09 | Zika virus envelope protein structure in complex with a potent Human mAb | Homo sapiens; Zika virus ZIKV/Human/Cambodia/FSS13025/2010 | homo sapiens | homo sapiens | zika virus zikv/human/cambodia/fss13025/2010 | Cameron, A., Puhl, A.C., deSilva, A.M., Premkumar, L. | 3.38 | X-RAY DIFFRACTION | 0.259 | 0.232 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null | sabdab_dataset/8dv6/abangle/8dv6.abangle | sabdab_dataset/8dv6/annotation/8dv6_H_VH.ann | sabdab_dataset/8dv6/annotation/8dv6_D_VL.ann | sabdab_dataset/8dv6/imgt/8dv6_H_H.ann | sabdab_dataset/8dv6/imgt/8dv6_D_L.ann | sabdab_dataset/8dv6/sequence/8dv6_raw.pdb | sabdab_dataset/8dv6/sequence/8dv6_H_VH.fa | sabdab_dataset/8dv6/sequence/8dv6_D_VL.fa | sabdab_dataset/8dv6/structure/8dv6.pdb | sabdab_dataset/8dv6/structure/chothia/8dv6.pdb | true | false | train |
8dvd | H | L | 0 | G | E | F | protein | protein | protein | NA | NA | NA | envelope glycoprotein gp160 | envelope glycoprotein gp160 | envelope glycoprotein gp160 | VIRAL PROTEIN/Immune System | 01/08/09 | Cryo-EM structure of SIVmac239 SOS-2P Env trimer in complex with human bNAb PGT145 | Homo sapiens; Simian immunodeficiency virus | homo sapiens | homo sapiens | simian immunodeficiency virus | simian immunodeficiency virus | simian immunodeficiency virus | Gorman, J., Kwong, P.D. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8dvd/abangle/8dvd.abangle | sabdab_dataset/8dvd/annotation/8dvd_H_VH.ann | sabdab_dataset/8dvd/annotation/8dvd_L_VL.ann | sabdab_dataset/8dvd/imgt/8dvd_H_H.ann | sabdab_dataset/8dvd/imgt/8dvd_L_L.ann | sabdab_dataset/8dvd/sequence/8dvd_raw.pdb | sabdab_dataset/8dvd/sequence/8dvd_H_VH.fa | sabdab_dataset/8dvd/sequence/8dvd_L_VL.fa | sabdab_dataset/8dvd/structure/8dvd.pdb | sabdab_dataset/8dvd/structure/chothia/8dvd.pdb | false | false | train |
8dw2 | D | C | 0 | B | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 12/07/22 | Cryo-EM structure of SARS-CoV-2 RBD in complex with anti-SARS-CoV-2 DARPin,SR22, and two antibody Fabs, S309 and CR3022 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Kwon, Y.D., Gorman, J., Kwong, P.D. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8dw2/abangle/8dw2.abangle | sabdab_dataset/8dw2/annotation/8dw2_D_VH.ann | sabdab_dataset/8dw2/annotation/8dw2_C_VL.ann | sabdab_dataset/8dw2/imgt/8dw2_D_H.ann | sabdab_dataset/8dw2/imgt/8dw2_C_L.ann | sabdab_dataset/8dw2/sequence/8dw2_raw.pdb | sabdab_dataset/8dw2/sequence/8dw2_D_VH.fa | sabdab_dataset/8dw2/sequence/8dw2_C_VL.fa | sabdab_dataset/8dw2/structure/8dw2.pdb | sabdab_dataset/8dw2/structure/chothia/8dw2.pdb | false | false | train |
8dw2 | H | L | 0 | B | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 12/07/22 | Cryo-EM structure of SARS-CoV-2 RBD in complex with anti-SARS-CoV-2 DARPin,SR22, and two antibody Fabs, S309 and CR3022 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Kwon, Y.D., Gorman, J., Kwong, P.D. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV4 | Kappa | null | null | null | null | null | sabdab_dataset/8dw2/abangle/8dw2.abangle | sabdab_dataset/8dw2/annotation/8dw2_H_VH.ann | sabdab_dataset/8dw2/annotation/8dw2_L_VL.ann | sabdab_dataset/8dw2/imgt/8dw2_H_H.ann | sabdab_dataset/8dw2/imgt/8dw2_L_L.ann | sabdab_dataset/8dw2/sequence/8dw2_raw.pdb | sabdab_dataset/8dw2/sequence/8dw2_H_VH.fa | sabdab_dataset/8dw2/sequence/8dw2_L_VL.fa | sabdab_dataset/8dw2/structure/8dw2.pdb | sabdab_dataset/8dw2/structure/chothia/8dw2.pdb | false | false | train |
8dw3 | D | C | 0 | B | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 12/07/22 | Cryo-EM structure of SARS-CoV-2 RBD in complex with anti-SARS-CoV-2 DARPin,SR16m, and two antibody Fabs, S309 and CR3022 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Kwon, Y.D., Gorman, J., Kwong, P.D. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8dw3/abangle/8dw3.abangle | sabdab_dataset/8dw3/annotation/8dw3_D_VH.ann | sabdab_dataset/8dw3/annotation/8dw3_C_VL.ann | sabdab_dataset/8dw3/imgt/8dw3_D_H.ann | sabdab_dataset/8dw3/imgt/8dw3_C_L.ann | sabdab_dataset/8dw3/sequence/8dw3_raw.pdb | sabdab_dataset/8dw3/sequence/8dw3_D_VH.fa | sabdab_dataset/8dw3/sequence/8dw3_C_VL.fa | sabdab_dataset/8dw3/structure/8dw3.pdb | sabdab_dataset/8dw3/structure/chothia/8dw3.pdb | false | false | test |
8dw3 | H | L | 0 | B | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 12/07/22 | Cryo-EM structure of SARS-CoV-2 RBD in complex with anti-SARS-CoV-2 DARPin,SR16m, and two antibody Fabs, S309 and CR3022 | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Kwon, Y.D., Gorman, J., Kwong, P.D. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV4 | Kappa | null | null | null | null | null | sabdab_dataset/8dw3/abangle/8dw3.abangle | sabdab_dataset/8dw3/annotation/8dw3_H_VH.ann | sabdab_dataset/8dw3/annotation/8dw3_L_VL.ann | sabdab_dataset/8dw3/imgt/8dw3_H_H.ann | sabdab_dataset/8dw3/imgt/8dw3_L_L.ann | sabdab_dataset/8dw3/sequence/8dw3_raw.pdb | sabdab_dataset/8dw3/sequence/8dw3_H_VH.fa | sabdab_dataset/8dw3/sequence/8dw3_L_VL.fa | sabdab_dataset/8dw3/structure/8dw3.pdb | sabdab_dataset/8dw3/structure/chothia/8dw3.pdb | false | false | train |
8dw9 | C | D | 0 | B | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 12/07/22 | Crystal structure of neutralizing antibody D29 Fab in complex with SARS-CoV-2 spike receptor binding domain (RBD) | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Reddem, E.R., Shapiro, L. | 4 | X-RAY DIFFRACTION | 0.381 | 0.3 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8dw9/abangle/8dw9.abangle | sabdab_dataset/8dw9/annotation/8dw9_C_VH.ann | sabdab_dataset/8dw9/annotation/8dw9_D_VL.ann | sabdab_dataset/8dw9/imgt/8dw9_C_H.ann | sabdab_dataset/8dw9/imgt/8dw9_D_L.ann | sabdab_dataset/8dw9/sequence/8dw9_raw.pdb | sabdab_dataset/8dw9/sequence/8dw9_C_VH.fa | sabdab_dataset/8dw9/sequence/8dw9_D_VL.fa | sabdab_dataset/8dw9/structure/8dw9.pdb | sabdab_dataset/8dw9/structure/chothia/8dw9.pdb | true | false | test |
8dw9 | H | L | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 12/07/22 | Crystal structure of neutralizing antibody D29 Fab in complex with SARS-CoV-2 spike receptor binding domain (RBD) | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Reddem, E.R., Shapiro, L. | 4 | X-RAY DIFFRACTION | 0.381 | 0.3 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/8dw9/abangle/8dw9.abangle | sabdab_dataset/8dw9/annotation/8dw9_H_VH.ann | sabdab_dataset/8dw9/annotation/8dw9_L_VL.ann | sabdab_dataset/8dw9/imgt/8dw9_H_H.ann | sabdab_dataset/8dw9/imgt/8dw9_L_L.ann | sabdab_dataset/8dw9/sequence/8dw9_raw.pdb | sabdab_dataset/8dw9/sequence/8dw9_H_VH.fa | sabdab_dataset/8dw9/sequence/8dw9_L_VL.fa | sabdab_dataset/8dw9/structure/8dw9.pdb | sabdab_dataset/8dw9/structure/chothia/8dw9.pdb | true | false | train |
8dwa | H | L | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 12/07/22 | Crystal structure of neutralizing antibody P1D9 Fab in complex with SARS-CoV-2 spike receptor binding domain (RBD) | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Reddem, E.R., Shapiro, L. | 3.2 | X-RAY DIFFRACTION | 0.297 | 0.235 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dwa/abangle/8dwa.abangle | sabdab_dataset/8dwa/annotation/8dwa_H_VH.ann | sabdab_dataset/8dwa/annotation/8dwa_L_VL.ann | sabdab_dataset/8dwa/imgt/8dwa_H_H.ann | sabdab_dataset/8dwa/imgt/8dwa_L_L.ann | sabdab_dataset/8dwa/sequence/8dwa_raw.pdb | sabdab_dataset/8dwa/sequence/8dwa_H_VH.fa | sabdab_dataset/8dwa/sequence/8dwa_L_VL.fa | sabdab_dataset/8dwa/structure/8dwa.pdb | sabdab_dataset/8dwa/structure/chothia/8dwa.pdb | true | false | train |
8dwc | E | e | 0 | B | C | protein | protein | NA | NA | gs-mini-gq chimera | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | SIGNALING PROTEIN | 11/02/22 | CryoEM structure of Gq-coupled MRGPRX1 with peptide agonist BAM8-22 | Bos taurus; Homo sapiens; Mus musculus | mus musculus | null | homo sapiens | homo sapiens | Liu, Y., Cao, C., Fay, J.F., Roth, B.L. | 0 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dwc/abangle/8dwc.abangle | sabdab_dataset/8dwc/annotation/8dwc_E_VH.ann | sabdab_dataset/8dwc/annotation/8dwc_E_VL.ann | sabdab_dataset/8dwc/imgt/8dwc_E_H.ann | sabdab_dataset/8dwc/imgt/8dwc_E_L.ann | sabdab_dataset/8dwc/sequence/8dwc_raw.pdb | sabdab_dataset/8dwc/sequence/8dwc_E_VH.fa | sabdab_dataset/8dwc/sequence/8dwc_E_VL.fa | sabdab_dataset/8dwc/structure/8dwc.pdb | sabdab_dataset/8dwc/structure/chothia/8dwc.pdb | false | false | test |
8dwg | E | e | 0 | B | C | protein | protein | NA | NA | gs-mini-gq chimera | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | SIGNALING PROTEIN | 11/02/22 | CryoEM structure of Gq-coupled MRGPRX1 with peptide ligand BAM8-22 and positive allosteric modulator ML382 | Bos taurus; Homo sapiens; Mus musculus | mus musculus | null | homo sapiens | homo sapiens | Liu, Y., Cao, C., Fay, J.F., Roth, B.L. | 0 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dwg/abangle/8dwg.abangle | sabdab_dataset/8dwg/annotation/8dwg_E_VH.ann | sabdab_dataset/8dwg/annotation/8dwg_E_VL.ann | sabdab_dataset/8dwg/imgt/8dwg_E_H.ann | sabdab_dataset/8dwg/imgt/8dwg_E_L.ann | sabdab_dataset/8dwg/sequence/8dwg_raw.pdb | sabdab_dataset/8dwg/sequence/8dwg_E_VH.fa | sabdab_dataset/8dwg/sequence/8dwg_E_VL.fa | sabdab_dataset/8dwg/structure/8dwg.pdb | sabdab_dataset/8dwg/structure/chothia/8dwg.pdb | false | false | train |
8dwo | H | L | 0 | B | A | protein | protein | NA | NA | togavirin | togavirin | VIRUS LIKE PARTICLE | 07/19/23 | Cryo-EM Structure of Eastern Equine Encephalitis Virus in complex with SKE26 Fab | Eastern equine encephalitis virus; Macaca fascicularis | macaca fascicularis | macaca fascicularis | eastern equine encephalitis virus | eastern equine encephalitis virus | Pletnev, S., Verardi, R., Roedeger, M., Kwong, P. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8dwo/abangle/8dwo.abangle | sabdab_dataset/8dwo/annotation/8dwo_H_VH.ann | sabdab_dataset/8dwo/annotation/8dwo_L_VL.ann | sabdab_dataset/8dwo/imgt/8dwo_H_H.ann | sabdab_dataset/8dwo/imgt/8dwo_L_L.ann | sabdab_dataset/8dwo/sequence/8dwo_raw.pdb | sabdab_dataset/8dwo/sequence/8dwo_H_VH.fa | sabdab_dataset/8dwo/sequence/8dwo_L_VL.fa | sabdab_dataset/8dwo/structure/8dwo.pdb | sabdab_dataset/8dwo/structure/chothia/8dwo.pdb | false | false | test |
8dwo | S | T | 0 | G | F | protein | protein | NA | NA | togavirin | togavirin | VIRUS LIKE PARTICLE | 07/19/23 | Cryo-EM Structure of Eastern Equine Encephalitis Virus in complex with SKE26 Fab | Eastern equine encephalitis virus; Macaca fascicularis | macaca fascicularis | macaca fascicularis | eastern equine encephalitis virus | eastern equine encephalitis virus | Pletnev, S., Verardi, R., Roedeger, M., Kwong, P. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8dwo/abangle/8dwo.abangle | sabdab_dataset/8dwo/annotation/8dwo_S_VH.ann | sabdab_dataset/8dwo/annotation/8dwo_T_VL.ann | sabdab_dataset/8dwo/imgt/8dwo_S_H.ann | sabdab_dataset/8dwo/imgt/8dwo_T_L.ann | sabdab_dataset/8dwo/sequence/8dwo_raw.pdb | sabdab_dataset/8dwo/sequence/8dwo_S_VH.fa | sabdab_dataset/8dwo/sequence/8dwo_T_VL.fa | sabdab_dataset/8dwo/structure/8dwo.pdb | sabdab_dataset/8dwo/structure/chothia/8dwo.pdb | false | false | test |
8dwo | U | V | 0 | K | J | protein | protein | NA | NA | togavirin | togavirin | VIRUS LIKE PARTICLE | 07/19/23 | Cryo-EM Structure of Eastern Equine Encephalitis Virus in complex with SKE26 Fab | Eastern equine encephalitis virus; Macaca fascicularis | macaca fascicularis | macaca fascicularis | eastern equine encephalitis virus | eastern equine encephalitis virus | Pletnev, S., Verardi, R., Roedeger, M., Kwong, P. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV2 | Kappa | null | null | null | null | null | sabdab_dataset/8dwo/abangle/8dwo.abangle | sabdab_dataset/8dwo/annotation/8dwo_U_VH.ann | sabdab_dataset/8dwo/annotation/8dwo_V_VL.ann | sabdab_dataset/8dwo/imgt/8dwo_U_H.ann | sabdab_dataset/8dwo/imgt/8dwo_V_L.ann | sabdab_dataset/8dwo/sequence/8dwo_raw.pdb | sabdab_dataset/8dwo/sequence/8dwo_U_VH.fa | sabdab_dataset/8dwo/sequence/8dwo_V_VL.fa | sabdab_dataset/8dwo/structure/8dwo.pdb | sabdab_dataset/8dwo/structure/chothia/8dwo.pdb | false | false | train |
8dww | H | L | 0 | N | protein | null | e2 glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 05/31/23 | Chikungunya VLP in complex with neutralizing Fab 506.A08 (asymmetric unit) | Chikungunya virus strain Senegal 37997; Homo sapiens | homo sapiens | homo sapiens | chikungunya virus strain senegal 37997 | Adams, L.J., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID) | 3.13 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dww/abangle/8dww.abangle | sabdab_dataset/8dww/annotation/8dww_H_VH.ann | sabdab_dataset/8dww/annotation/8dww_L_VL.ann | sabdab_dataset/8dww/imgt/8dww_H_H.ann | sabdab_dataset/8dww/imgt/8dww_L_L.ann | sabdab_dataset/8dww/sequence/8dww_raw.pdb | sabdab_dataset/8dww/sequence/8dww_H_VH.fa | sabdab_dataset/8dww/sequence/8dww_L_VL.fa | sabdab_dataset/8dww/structure/8dww.pdb | sabdab_dataset/8dww/structure/chothia/8dww.pdb | false | false | train |
8dww | V | U | 0 | M | protein | null | e2 glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 05/31/23 | Chikungunya VLP in complex with neutralizing Fab 506.A08 (asymmetric unit) | Chikungunya virus strain Senegal 37997; Homo sapiens | homo sapiens | homo sapiens | chikungunya virus strain senegal 37997 | Adams, L.J., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID) | 3.13 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dww/abangle/8dww.abangle | sabdab_dataset/8dww/annotation/8dww_V_VH.ann | sabdab_dataset/8dww/annotation/8dww_U_VL.ann | sabdab_dataset/8dww/imgt/8dww_V_H.ann | sabdab_dataset/8dww/imgt/8dww_U_L.ann | sabdab_dataset/8dww/sequence/8dww_raw.pdb | sabdab_dataset/8dww/sequence/8dww_V_VH.fa | sabdab_dataset/8dww/sequence/8dww_U_VL.fa | sabdab_dataset/8dww/structure/8dww.pdb | sabdab_dataset/8dww/structure/chothia/8dww.pdb | false | false | train |
8dww | X | W | 0 | O | protein | null | e2 glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 05/31/23 | Chikungunya VLP in complex with neutralizing Fab 506.A08 (asymmetric unit) | Chikungunya virus strain Senegal 37997; Homo sapiens | homo sapiens | homo sapiens | chikungunya virus strain senegal 37997 | Adams, L.J., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID) | 3.13 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dww/abangle/8dww.abangle | sabdab_dataset/8dww/annotation/8dww_X_VH.ann | sabdab_dataset/8dww/annotation/8dww_W_VL.ann | sabdab_dataset/8dww/imgt/8dww_X_H.ann | sabdab_dataset/8dww/imgt/8dww_W_L.ann | sabdab_dataset/8dww/sequence/8dww_raw.pdb | sabdab_dataset/8dww/sequence/8dww_X_VH.fa | sabdab_dataset/8dww/sequence/8dww_W_VL.fa | sabdab_dataset/8dww/structure/8dww.pdb | sabdab_dataset/8dww/structure/chothia/8dww.pdb | false | false | train |
8dww | Z | Y | 0 | P | protein | null | e2 glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 05/31/23 | Chikungunya VLP in complex with neutralizing Fab 506.A08 (asymmetric unit) | Chikungunya virus strain Senegal 37997; Homo sapiens | homo sapiens | homo sapiens | chikungunya virus strain senegal 37997 | Adams, L.J., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID) | 3.13 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dww/abangle/8dww.abangle | sabdab_dataset/8dww/annotation/8dww_Z_VH.ann | sabdab_dataset/8dww/annotation/8dww_Y_VL.ann | sabdab_dataset/8dww/imgt/8dww_Z_H.ann | sabdab_dataset/8dww/imgt/8dww_Y_L.ann | sabdab_dataset/8dww/sequence/8dww_raw.pdb | sabdab_dataset/8dww/sequence/8dww_Z_VH.fa | sabdab_dataset/8dww/sequence/8dww_Y_VL.fa | sabdab_dataset/8dww/structure/8dww.pdb | sabdab_dataset/8dww/structure/chothia/8dww.pdb | false | false | test |
8dwx | H | L | 0 | P | protein | null | e2 glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 05/31/23 | Chikungunya VLP in complex with neutralizing Fab 506.C01 (asymmetric unit) | Chikungunya virus strain Senegal 37997; Homo sapiens | homo sapiens | homo sapiens | chikungunya virus strain senegal 37997 | Adams, L.J., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID) | 3.27 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dwx/abangle/8dwx.abangle | sabdab_dataset/8dwx/annotation/8dwx_H_VH.ann | sabdab_dataset/8dwx/annotation/8dwx_L_VL.ann | sabdab_dataset/8dwx/imgt/8dwx_H_H.ann | sabdab_dataset/8dwx/imgt/8dwx_L_L.ann | sabdab_dataset/8dwx/sequence/8dwx_raw.pdb | sabdab_dataset/8dwx/sequence/8dwx_H_VH.fa | sabdab_dataset/8dwx/sequence/8dwx_L_VL.fa | sabdab_dataset/8dwx/structure/8dwx.pdb | sabdab_dataset/8dwx/structure/chothia/8dwx.pdb | false | false | train |
8dwx | V | U | 0 | M | protein | null | e2 glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 05/31/23 | Chikungunya VLP in complex with neutralizing Fab 506.C01 (asymmetric unit) | Chikungunya virus strain Senegal 37997; Homo sapiens | homo sapiens | homo sapiens | chikungunya virus strain senegal 37997 | Adams, L.J., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID) | 3.27 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dwx/abangle/8dwx.abangle | sabdab_dataset/8dwx/annotation/8dwx_V_VH.ann | sabdab_dataset/8dwx/annotation/8dwx_U_VL.ann | sabdab_dataset/8dwx/imgt/8dwx_V_H.ann | sabdab_dataset/8dwx/imgt/8dwx_U_L.ann | sabdab_dataset/8dwx/sequence/8dwx_raw.pdb | sabdab_dataset/8dwx/sequence/8dwx_V_VH.fa | sabdab_dataset/8dwx/sequence/8dwx_U_VL.fa | sabdab_dataset/8dwx/structure/8dwx.pdb | sabdab_dataset/8dwx/structure/chothia/8dwx.pdb | false | false | train |
8dwx | X | W | 0 | N | protein | null | e2 glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 05/31/23 | Chikungunya VLP in complex with neutralizing Fab 506.C01 (asymmetric unit) | Chikungunya virus strain Senegal 37997; Homo sapiens | homo sapiens | homo sapiens | chikungunya virus strain senegal 37997 | Adams, L.J., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID) | 3.27 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dwx/abangle/8dwx.abangle | sabdab_dataset/8dwx/annotation/8dwx_X_VH.ann | sabdab_dataset/8dwx/annotation/8dwx_W_VL.ann | sabdab_dataset/8dwx/imgt/8dwx_X_H.ann | sabdab_dataset/8dwx/imgt/8dwx_W_L.ann | sabdab_dataset/8dwx/sequence/8dwx_raw.pdb | sabdab_dataset/8dwx/sequence/8dwx_X_VH.fa | sabdab_dataset/8dwx/sequence/8dwx_W_VL.fa | sabdab_dataset/8dwx/structure/8dwx.pdb | sabdab_dataset/8dwx/structure/chothia/8dwx.pdb | false | false | test |
8dwx | Z | Y | 0 | O | protein | null | e2 glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 05/31/23 | Chikungunya VLP in complex with neutralizing Fab 506.C01 (asymmetric unit) | Chikungunya virus strain Senegal 37997; Homo sapiens | homo sapiens | homo sapiens | chikungunya virus strain senegal 37997 | Adams, L.J., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID) | 3.27 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dwx/abangle/8dwx.abangle | sabdab_dataset/8dwx/annotation/8dwx_Z_VH.ann | sabdab_dataset/8dwx/annotation/8dwx_Y_VL.ann | sabdab_dataset/8dwx/imgt/8dwx_Z_H.ann | sabdab_dataset/8dwx/imgt/8dwx_Y_L.ann | sabdab_dataset/8dwx/sequence/8dwx_raw.pdb | sabdab_dataset/8dwx/sequence/8dwx_Z_VH.fa | sabdab_dataset/8dwx/sequence/8dwx_Y_VL.fa | sabdab_dataset/8dwx/structure/8dwx.pdb | sabdab_dataset/8dwx/structure/chothia/8dwx.pdb | false | false | validation |
8dwy | H | L | 0 | P | protein | null | e2 glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 05/31/23 | Chikungunya VLP in complex with neutralizing Fab CHK-265 (asymmetric unit) | Chikungunya virus strain Senegal 37997; Homo sapiens | homo sapiens | homo sapiens | chikungunya virus strain senegal 37997 | Adams, L.J., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID) | 3.18 | ELECTRON MICROSCOPY | null | null | false | true | IGHV9 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dwy/abangle/8dwy.abangle | sabdab_dataset/8dwy/annotation/8dwy_H_VH.ann | sabdab_dataset/8dwy/annotation/8dwy_L_VL.ann | sabdab_dataset/8dwy/imgt/8dwy_H_H.ann | sabdab_dataset/8dwy/imgt/8dwy_L_L.ann | sabdab_dataset/8dwy/sequence/8dwy_raw.pdb | sabdab_dataset/8dwy/sequence/8dwy_H_VH.fa | sabdab_dataset/8dwy/sequence/8dwy_L_VL.fa | sabdab_dataset/8dwy/structure/8dwy.pdb | sabdab_dataset/8dwy/structure/chothia/8dwy.pdb | false | false | train |
8dwy | V | U | 0 | M | protein | null | e2 glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 05/31/23 | Chikungunya VLP in complex with neutralizing Fab CHK-265 (asymmetric unit) | Chikungunya virus strain Senegal 37997; Homo sapiens | homo sapiens | homo sapiens | chikungunya virus strain senegal 37997 | Adams, L.J., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID) | 3.18 | ELECTRON MICROSCOPY | null | null | false | true | IGHV9 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dwy/abangle/8dwy.abangle | sabdab_dataset/8dwy/annotation/8dwy_V_VH.ann | sabdab_dataset/8dwy/annotation/8dwy_U_VL.ann | sabdab_dataset/8dwy/imgt/8dwy_V_H.ann | sabdab_dataset/8dwy/imgt/8dwy_U_L.ann | sabdab_dataset/8dwy/sequence/8dwy_raw.pdb | sabdab_dataset/8dwy/sequence/8dwy_V_VH.fa | sabdab_dataset/8dwy/sequence/8dwy_U_VL.fa | sabdab_dataset/8dwy/structure/8dwy.pdb | sabdab_dataset/8dwy/structure/chothia/8dwy.pdb | false | false | train |
8dwy | X | W | 0 | N | protein | null | e2 glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 05/31/23 | Chikungunya VLP in complex with neutralizing Fab CHK-265 (asymmetric unit) | Chikungunya virus strain Senegal 37997; Homo sapiens | homo sapiens | homo sapiens | chikungunya virus strain senegal 37997 | Adams, L.J., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID) | 3.18 | ELECTRON MICROSCOPY | null | null | false | true | IGHV9 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dwy/abangle/8dwy.abangle | sabdab_dataset/8dwy/annotation/8dwy_X_VH.ann | sabdab_dataset/8dwy/annotation/8dwy_W_VL.ann | sabdab_dataset/8dwy/imgt/8dwy_X_H.ann | sabdab_dataset/8dwy/imgt/8dwy_W_L.ann | sabdab_dataset/8dwy/sequence/8dwy_raw.pdb | sabdab_dataset/8dwy/sequence/8dwy_X_VH.fa | sabdab_dataset/8dwy/sequence/8dwy_W_VL.fa | sabdab_dataset/8dwy/structure/8dwy.pdb | sabdab_dataset/8dwy/structure/chothia/8dwy.pdb | false | false | validation |
8dwy | Z | Y | 0 | O | protein | null | e2 glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 05/31/23 | Chikungunya VLP in complex with neutralizing Fab CHK-265 (asymmetric unit) | Chikungunya virus strain Senegal 37997; Homo sapiens | homo sapiens | homo sapiens | chikungunya virus strain senegal 37997 | Adams, L.J., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID) | 3.18 | ELECTRON MICROSCOPY | null | null | false | true | IGHV9 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/8dwy/abangle/8dwy.abangle | sabdab_dataset/8dwy/annotation/8dwy_Z_VH.ann | sabdab_dataset/8dwy/annotation/8dwy_Y_VL.ann | sabdab_dataset/8dwy/imgt/8dwy_Z_H.ann | sabdab_dataset/8dwy/imgt/8dwy_Y_L.ann | sabdab_dataset/8dwy/sequence/8dwy_raw.pdb | sabdab_dataset/8dwy/sequence/8dwy_Z_VH.fa | sabdab_dataset/8dwy/sequence/8dwy_Y_VL.fa | sabdab_dataset/8dwy/structure/8dwy.pdb | sabdab_dataset/8dwy/structure/chothia/8dwy.pdb | false | false | train |
8dxs | F | null | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 12/07/22 | Cryo-EM structure of RBD-directed neutralizing antibody P2B4 in complex with prefusion SARS-CoV-2 spike glycoprotein | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | null | severe acute respiratory syndrome coronavirus2 | Reddem, E.R., Shapiro, L. | 3.76 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null | sabdab_dataset/8dxs/abangle/8dxs.abangle | sabdab_dataset/8dxs/annotation/8dxs_F_VH.ann | null | sabdab_dataset/8dxs/imgt/8dxs_F_H.ann | null | sabdab_dataset/8dxs/sequence/8dxs_raw.pdb | sabdab_dataset/8dxs/sequence/8dxs_F_VH.fa | null | sabdab_dataset/8dxs/structure/8dxs.pdb | sabdab_dataset/8dxs/structure/chothia/8dxs.pdb | false | false | train |
8dxs | G | null | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 12/07/22 | Cryo-EM structure of RBD-directed neutralizing antibody P2B4 in complex with prefusion SARS-CoV-2 spike glycoprotein | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | null | severe acute respiratory syndrome coronavirus2 | Reddem, E.R., Shapiro, L. | 3.76 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null | sabdab_dataset/8dxs/abangle/8dxs.abangle | sabdab_dataset/8dxs/annotation/8dxs_G_VH.ann | null | sabdab_dataset/8dxs/imgt/8dxs_G_H.ann | null | sabdab_dataset/8dxs/sequence/8dxs_raw.pdb | sabdab_dataset/8dxs/sequence/8dxs_G_VH.fa | null | sabdab_dataset/8dxs/structure/8dxs.pdb | sabdab_dataset/8dxs/structure/chothia/8dxs.pdb | false | false | test |
8dxs | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 12/07/22 | Cryo-EM structure of RBD-directed neutralizing antibody P2B4 in complex with prefusion SARS-CoV-2 spike glycoprotein | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Reddem, E.R., Shapiro, L. | 3.76 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dxs/abangle/8dxs.abangle | sabdab_dataset/8dxs/annotation/8dxs_H_VH.ann | sabdab_dataset/8dxs/annotation/8dxs_L_VL.ann | sabdab_dataset/8dxs/imgt/8dxs_H_H.ann | sabdab_dataset/8dxs/imgt/8dxs_L_L.ann | sabdab_dataset/8dxs/sequence/8dxs_raw.pdb | sabdab_dataset/8dxs/sequence/8dxs_H_VH.fa | sabdab_dataset/8dxs/sequence/8dxs_L_VL.fa | sabdab_dataset/8dxs/structure/8dxs.pdb | sabdab_dataset/8dxs/structure/chothia/8dxs.pdb | false | false | train |
8dxs | null | I | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 12/07/22 | Cryo-EM structure of RBD-directed neutralizing antibody P2B4 in complex with prefusion SARS-CoV-2 spike glycoprotein | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | null | homo sapiens | severe acute respiratory syndrome coronavirus2 | Reddem, E.R., Shapiro, L. | 3.76 | ELECTRON MICROSCOPY | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dxs/abangle/8dxs.abangle | null | sabdab_dataset/8dxs/annotation/8dxs_I_VL.ann | null | sabdab_dataset/8dxs/imgt/8dxs_I_L.ann | sabdab_dataset/8dxs/sequence/8dxs_raw.pdb | null | sabdab_dataset/8dxs/sequence/8dxs_I_VL.fa | sabdab_dataset/8dxs/structure/8dxs.pdb | sabdab_dataset/8dxs/structure/chothia/8dxs.pdb | false | false | train |
8dxs | null | J | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 12/07/22 | Cryo-EM structure of RBD-directed neutralizing antibody P2B4 in complex with prefusion SARS-CoV-2 spike glycoprotein | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | null | homo sapiens | severe acute respiratory syndrome coronavirus2 | Reddem, E.R., Shapiro, L. | 3.76 | ELECTRON MICROSCOPY | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dxs/abangle/8dxs.abangle | null | sabdab_dataset/8dxs/annotation/8dxs_J_VL.ann | null | sabdab_dataset/8dxs/imgt/8dxs_J_L.ann | sabdab_dataset/8dxs/sequence/8dxs_raw.pdb | null | sabdab_dataset/8dxs/sequence/8dxs_J_VL.fa | sabdab_dataset/8dxs/structure/8dxs.pdb | sabdab_dataset/8dxs/structure/chothia/8dxs.pdb | false | false | test |
8dxt | H | L | 0 | R | protein | null | spike protein s1 | ANTIVIRAL PROTEIN | 01/18/23 | Fab arm of antibody GAR12 bound to the receptor binding domain of SARS-CoV-2. | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Langley, D.B., Christ, D., Henry, J.Y. | 2.25 | X-RAY DIFFRACTION | 0.254 | 0.211 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dxt/abangle/8dxt.abangle | sabdab_dataset/8dxt/annotation/8dxt_H_VH.ann | sabdab_dataset/8dxt/annotation/8dxt_L_VL.ann | sabdab_dataset/8dxt/imgt/8dxt_H_H.ann | sabdab_dataset/8dxt/imgt/8dxt_L_L.ann | sabdab_dataset/8dxt/sequence/8dxt_raw.pdb | sabdab_dataset/8dxt/sequence/8dxt_H_VH.fa | sabdab_dataset/8dxt/sequence/8dxt_L_VL.fa | sabdab_dataset/8dxt/structure/8dxt.pdb | sabdab_dataset/8dxt/structure/chothia/8dxt.pdb | true | false | train |
8dxu | A | B | 0 | R | protein | null | spike protein s1 | ANTIVIRAL PROTEIN | 01/18/23 | Fab arms of antibodies GAR03 and 10G4 bound to the receptor binding domain of SARS-CoV-2 in a 1:1:1 complex. | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Langley, D.B., Christ, D. | 2.728 | X-RAY DIFFRACTION | 0.269 | 0.223 | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/8dxu/abangle/8dxu.abangle | sabdab_dataset/8dxu/annotation/8dxu_A_VH.ann | sabdab_dataset/8dxu/annotation/8dxu_B_VL.ann | sabdab_dataset/8dxu/imgt/8dxu_A_H.ann | sabdab_dataset/8dxu/imgt/8dxu_B_L.ann | sabdab_dataset/8dxu/sequence/8dxu_raw.pdb | sabdab_dataset/8dxu/sequence/8dxu_A_VH.fa | sabdab_dataset/8dxu/sequence/8dxu_B_VL.fa | sabdab_dataset/8dxu/structure/8dxu.pdb | sabdab_dataset/8dxu/structure/chothia/8dxu.pdb | true | false | train |
8dxu | H | L | 0 | R | protein | null | spike protein s1 | ANTIVIRAL PROTEIN | 01/18/23 | Fab arms of antibodies GAR03 and 10G4 bound to the receptor binding domain of SARS-CoV-2 in a 1:1:1 complex. | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Langley, D.B., Christ, D. | 2.728 | X-RAY DIFFRACTION | 0.269 | 0.223 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/8dxu/abangle/8dxu.abangle | sabdab_dataset/8dxu/annotation/8dxu_H_VH.ann | sabdab_dataset/8dxu/annotation/8dxu_L_VL.ann | sabdab_dataset/8dxu/imgt/8dxu_H_H.ann | sabdab_dataset/8dxu/imgt/8dxu_L_L.ann | sabdab_dataset/8dxu/sequence/8dxu_raw.pdb | sabdab_dataset/8dxu/sequence/8dxu_H_VH.fa | sabdab_dataset/8dxu/sequence/8dxu_L_VL.fa | sabdab_dataset/8dxu/structure/8dxu.pdb | sabdab_dataset/8dxu/structure/chothia/8dxu.pdb | true | false | train |
8dy0 | A | a | 0 | null | null | null | null | IMMUNE SYSTEM | 05/03/23 | Crystal Structure of spFv GLK1 HL | Homo sapiens | homo sapiens | null | null | Luo, J., Boucher, L.E. | 2.1 | X-RAY DIFFRACTION | 0.224 | 0.182 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dy0/abangle/8dy0.abangle | sabdab_dataset/8dy0/annotation/8dy0_A_VH.ann | sabdab_dataset/8dy0/annotation/8dy0_A_VL.ann | sabdab_dataset/8dy0/imgt/8dy0_A_H.ann | sabdab_dataset/8dy0/imgt/8dy0_A_L.ann | sabdab_dataset/8dy0/sequence/8dy0_raw.pdb | sabdab_dataset/8dy0/sequence/8dy0_A_VH.fa | sabdab_dataset/8dy0/sequence/8dy0_A_VL.fa | sabdab_dataset/8dy0/structure/8dy0.pdb | sabdab_dataset/8dy0/structure/chothia/8dy0.pdb | true | false | test |
8dy0 | B | b | 0 | null | null | null | null | IMMUNE SYSTEM | 05/03/23 | Crystal Structure of spFv GLK1 HL | Homo sapiens | homo sapiens | null | null | Luo, J., Boucher, L.E. | 2.1 | X-RAY DIFFRACTION | 0.224 | 0.182 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dy0/abangle/8dy0.abangle | sabdab_dataset/8dy0/annotation/8dy0_B_VH.ann | sabdab_dataset/8dy0/annotation/8dy0_B_VL.ann | sabdab_dataset/8dy0/imgt/8dy0_B_H.ann | sabdab_dataset/8dy0/imgt/8dy0_B_L.ann | sabdab_dataset/8dy0/sequence/8dy0_raw.pdb | sabdab_dataset/8dy0/sequence/8dy0_B_VH.fa | sabdab_dataset/8dy0/sequence/8dy0_B_VL.fa | sabdab_dataset/8dy0/structure/8dy0.pdb | sabdab_dataset/8dy0/structure/chothia/8dy0.pdb | true | false | train |
8dy1 | C | c | 0 | A | protein | null | interleukin-17a | IMMUNE SYSTEM | 05/03/23 | Crystal Structure of scFv CAT2200 LH in complex with IL-17A | Homo sapiens | homo sapiens | null | homo sapiens | Luo, J., Armstrong, A.A. | 2.68 | X-RAY DIFFRACTION | 0.268 | 0.221 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dy1/abangle/8dy1.abangle | sabdab_dataset/8dy1/annotation/8dy1_C_VH.ann | sabdab_dataset/8dy1/annotation/8dy1_C_VL.ann | sabdab_dataset/8dy1/imgt/8dy1_C_H.ann | sabdab_dataset/8dy1/imgt/8dy1_C_L.ann | sabdab_dataset/8dy1/sequence/8dy1_raw.pdb | sabdab_dataset/8dy1/sequence/8dy1_C_VH.fa | sabdab_dataset/8dy1/sequence/8dy1_C_VL.fa | sabdab_dataset/8dy1/structure/8dy1.pdb | sabdab_dataset/8dy1/structure/chothia/8dy1.pdb | false | false | train |
8dy1 | D | d | 0 | B | protein | null | interleukin-17a | IMMUNE SYSTEM | 05/03/23 | Crystal Structure of scFv CAT2200 LH in complex with IL-17A | Homo sapiens | homo sapiens | null | homo sapiens | Luo, J., Armstrong, A.A. | 2.68 | X-RAY DIFFRACTION | 0.268 | 0.221 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dy1/abangle/8dy1.abangle | sabdab_dataset/8dy1/annotation/8dy1_D_VH.ann | sabdab_dataset/8dy1/annotation/8dy1_D_VL.ann | sabdab_dataset/8dy1/imgt/8dy1_D_H.ann | sabdab_dataset/8dy1/imgt/8dy1_D_L.ann | sabdab_dataset/8dy1/sequence/8dy1_raw.pdb | sabdab_dataset/8dy1/sequence/8dy1_D_VH.fa | sabdab_dataset/8dy1/sequence/8dy1_D_VL.fa | sabdab_dataset/8dy1/structure/8dy1.pdb | sabdab_dataset/8dy1/structure/chothia/8dy1.pdb | false | false | train |
8dy2 | A | a | 0 | null | null | null | null | IMMUNE SYSTEM | 05/03/23 | Crystal Structure of spFv GLK1 | Homo sapiens | homo sapiens | null | null | Luo, J., Boucher, L.E. | 1.65 | X-RAY DIFFRACTION | 0.246 | 0.215 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dy2/abangle/8dy2.abangle | sabdab_dataset/8dy2/annotation/8dy2_A_VH.ann | sabdab_dataset/8dy2/annotation/8dy2_A_VL.ann | sabdab_dataset/8dy2/imgt/8dy2_A_H.ann | sabdab_dataset/8dy2/imgt/8dy2_A_L.ann | sabdab_dataset/8dy2/sequence/8dy2_raw.pdb | sabdab_dataset/8dy2/sequence/8dy2_A_VH.fa | sabdab_dataset/8dy2/sequence/8dy2_A_VL.fa | sabdab_dataset/8dy2/structure/8dy2.pdb | sabdab_dataset/8dy2/structure/chothia/8dy2.pdb | false | false | train |
8dy2 | B | b | 0 | null | null | null | null | IMMUNE SYSTEM | 05/03/23 | Crystal Structure of spFv GLK1 | Homo sapiens | homo sapiens | null | null | Luo, J., Boucher, L.E. | 1.65 | X-RAY DIFFRACTION | 0.246 | 0.215 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dy2/abangle/8dy2.abangle | sabdab_dataset/8dy2/annotation/8dy2_B_VH.ann | sabdab_dataset/8dy2/annotation/8dy2_B_VL.ann | sabdab_dataset/8dy2/imgt/8dy2_B_H.ann | sabdab_dataset/8dy2/imgt/8dy2_B_L.ann | sabdab_dataset/8dy2/sequence/8dy2_raw.pdb | sabdab_dataset/8dy2/sequence/8dy2_B_VH.fa | sabdab_dataset/8dy2/sequence/8dy2_B_VL.fa | sabdab_dataset/8dy2/structure/8dy2.pdb | sabdab_dataset/8dy2/structure/chothia/8dy2.pdb | false | false | train |
8dy2 | C | c | 0 | null | null | null | null | IMMUNE SYSTEM | 05/03/23 | Crystal Structure of spFv GLK1 | Homo sapiens | homo sapiens | null | null | Luo, J., Boucher, L.E. | 1.65 | X-RAY DIFFRACTION | 0.246 | 0.215 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dy2/abangle/8dy2.abangle | sabdab_dataset/8dy2/annotation/8dy2_C_VH.ann | sabdab_dataset/8dy2/annotation/8dy2_C_VL.ann | sabdab_dataset/8dy2/imgt/8dy2_C_H.ann | sabdab_dataset/8dy2/imgt/8dy2_C_L.ann | sabdab_dataset/8dy2/sequence/8dy2_raw.pdb | sabdab_dataset/8dy2/sequence/8dy2_C_VH.fa | sabdab_dataset/8dy2/sequence/8dy2_C_VL.fa | sabdab_dataset/8dy2/structure/8dy2.pdb | sabdab_dataset/8dy2/structure/chothia/8dy2.pdb | false | false | validation |
8dy2 | D | d | 0 | null | null | null | null | IMMUNE SYSTEM | 05/03/23 | Crystal Structure of spFv GLK1 | Homo sapiens | homo sapiens | null | null | Luo, J., Boucher, L.E. | 1.65 | X-RAY DIFFRACTION | 0.246 | 0.215 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dy2/abangle/8dy2.abangle | sabdab_dataset/8dy2/annotation/8dy2_D_VH.ann | sabdab_dataset/8dy2/annotation/8dy2_D_VL.ann | sabdab_dataset/8dy2/imgt/8dy2_D_H.ann | sabdab_dataset/8dy2/imgt/8dy2_D_L.ann | sabdab_dataset/8dy2/sequence/8dy2_raw.pdb | sabdab_dataset/8dy2/sequence/8dy2_D_VH.fa | sabdab_dataset/8dy2/sequence/8dy2_D_VL.fa | sabdab_dataset/8dy2/structure/8dy2.pdb | sabdab_dataset/8dy2/structure/chothia/8dy2.pdb | false | false | train |
8dy3 | A | a | 0 | null | null | null | null | IMMUNE SYSTEM | 05/03/23 | Crystal Structure of spFv GLK2 HL | Homo sapiens | homo sapiens | null | null | Luo, J., Boucher, L.E. | 1.509 | X-RAY DIFFRACTION | 0.209 | 0.183 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dy3/abangle/8dy3.abangle | sabdab_dataset/8dy3/annotation/8dy3_A_VH.ann | sabdab_dataset/8dy3/annotation/8dy3_A_VL.ann | sabdab_dataset/8dy3/imgt/8dy3_A_H.ann | sabdab_dataset/8dy3/imgt/8dy3_A_L.ann | sabdab_dataset/8dy3/sequence/8dy3_raw.pdb | sabdab_dataset/8dy3/sequence/8dy3_A_VH.fa | sabdab_dataset/8dy3/sequence/8dy3_A_VL.fa | sabdab_dataset/8dy3/structure/8dy3.pdb | sabdab_dataset/8dy3/structure/chothia/8dy3.pdb | true | false | train |
8dy4 | A | a | 0 | null | null | null | null | IMMUNE SYSTEM | 05/03/23 | Crystal Structure of spFv CAT2200 HL | Homo sapiens | homo sapiens | null | null | Luo, J., Boucher, L.E. | 2.4 | X-RAY DIFFRACTION | 0.328 | 0.262 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dy4/abangle/8dy4.abangle | sabdab_dataset/8dy4/annotation/8dy4_A_VH.ann | sabdab_dataset/8dy4/annotation/8dy4_A_VL.ann | sabdab_dataset/8dy4/imgt/8dy4_A_H.ann | sabdab_dataset/8dy4/imgt/8dy4_A_L.ann | sabdab_dataset/8dy4/sequence/8dy4_raw.pdb | sabdab_dataset/8dy4/sequence/8dy4_A_VH.fa | sabdab_dataset/8dy4/sequence/8dy4_A_VL.fa | sabdab_dataset/8dy4/structure/8dy4.pdb | sabdab_dataset/8dy4/structure/chothia/8dy4.pdb | true | false | train |
8dy5 | A | a | 0 | C | protein | null | interleukin-17a | IMMUNE SYSTEM | 05/03/23 | Crystal Structure of spFv CAT2200 LH in complex with IL-17A | Homo sapiens | homo sapiens | null | homo sapiens | Luo, J., Boucher, L.E. | 2.2 | X-RAY DIFFRACTION | 0.232 | 0.188 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dy5/abangle/8dy5.abangle | sabdab_dataset/8dy5/annotation/8dy5_A_VH.ann | sabdab_dataset/8dy5/annotation/8dy5_A_VL.ann | sabdab_dataset/8dy5/imgt/8dy5_A_H.ann | sabdab_dataset/8dy5/imgt/8dy5_A_L.ann | sabdab_dataset/8dy5/sequence/8dy5_raw.pdb | sabdab_dataset/8dy5/sequence/8dy5_A_VH.fa | sabdab_dataset/8dy5/sequence/8dy5_A_VL.fa | sabdab_dataset/8dy5/structure/8dy5.pdb | sabdab_dataset/8dy5/structure/chothia/8dy5.pdb | true | true | train |
8dy5 | B | b | 0 | D | protein | null | interleukin-17a | IMMUNE SYSTEM | 05/03/23 | Crystal Structure of spFv CAT2200 LH in complex with IL-17A | Homo sapiens | homo sapiens | null | homo sapiens | Luo, J., Boucher, L.E. | 2.2 | X-RAY DIFFRACTION | 0.232 | 0.188 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/8dy5/abangle/8dy5.abangle | sabdab_dataset/8dy5/annotation/8dy5_B_VH.ann | sabdab_dataset/8dy5/annotation/8dy5_B_VL.ann | sabdab_dataset/8dy5/imgt/8dy5_B_H.ann | sabdab_dataset/8dy5/imgt/8dy5_B_L.ann | sabdab_dataset/8dy5/sequence/8dy5_raw.pdb | sabdab_dataset/8dy5/sequence/8dy5_B_VH.fa | sabdab_dataset/8dy5/sequence/8dy5_B_VL.fa | sabdab_dataset/8dy5/structure/8dy5.pdb | sabdab_dataset/8dy5/structure/chothia/8dy5.pdb | true | false | test |
8dy6 | C | D | 0 | A | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN/IMMUNE SYSTEM | 01/08/09 | Vaccine elicited Antibody MU89+S27Y bound to CH848.D949.10.17_N133D_N138T.DS.SOSIP.664 HIV-1 Env trimer | Human immunodeficiency virus 1; Mus musculus | mus musculus | mus musculus | human immunodeficiency virus 1 | Stalls, V., Acharya, P. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null | sabdab_dataset/8dy6/abangle/8dy6.abangle | sabdab_dataset/8dy6/annotation/8dy6_C_VH.ann | sabdab_dataset/8dy6/annotation/8dy6_D_VL.ann | sabdab_dataset/8dy6/imgt/8dy6_C_H.ann | sabdab_dataset/8dy6/imgt/8dy6_D_L.ann | sabdab_dataset/8dy6/sequence/8dy6_raw.pdb | sabdab_dataset/8dy6/sequence/8dy6_C_VH.fa | sabdab_dataset/8dy6/sequence/8dy6_D_VL.fa | sabdab_dataset/8dy6/structure/8dy6.pdb | sabdab_dataset/8dy6/structure/chothia/8dy6.pdb | false | false | validation |
8dy6 | G | H | 0 | E | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN/IMMUNE SYSTEM | 01/08/09 | Vaccine elicited Antibody MU89+S27Y bound to CH848.D949.10.17_N133D_N138T.DS.SOSIP.664 HIV-1 Env trimer | Human immunodeficiency virus 1; Mus musculus | mus musculus | mus musculus | human immunodeficiency virus 1 | Stalls, V., Acharya, P. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null | sabdab_dataset/8dy6/abangle/8dy6.abangle | sabdab_dataset/8dy6/annotation/8dy6_G_VH.ann | sabdab_dataset/8dy6/annotation/8dy6_H_VL.ann | sabdab_dataset/8dy6/imgt/8dy6_G_H.ann | sabdab_dataset/8dy6/imgt/8dy6_H_L.ann | sabdab_dataset/8dy6/sequence/8dy6_raw.pdb | sabdab_dataset/8dy6/sequence/8dy6_G_VH.fa | sabdab_dataset/8dy6/sequence/8dy6_H_VL.fa | sabdab_dataset/8dy6/structure/8dy6.pdb | sabdab_dataset/8dy6/structure/chothia/8dy6.pdb | false | false | train |
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