pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 365
values | r_factor stringclasses 358
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values | abangle stringlengths 40 40 ⌀ | annotation_H stringlengths 44 44 ⌀ | annotation_L stringlengths 44 44 ⌀ | imgt_H stringlengths 37 37 ⌀ | imgt_L stringlengths 37 37 ⌀ | sequence_raw stringlengths 41 41 | sequence_H stringlengths 41 41 ⌀ | sequence_L stringlengths 41 41 ⌀ | structure stringlengths 38 38 | structure_chothia stringlengths 46 46 | in_nr_set bool 2
classes | curated_quality_dataset bool 2
classes | split stringclasses 3
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
3ixx | G | H | 0 | A | protein | null | envelope protein e | VIRUS | 02/26/09 | The pseudo-atomic structure of West Nile immature virus in complex with Fab fragments of the anti-fusion loop antibody E53 | WEST NILE VIRUS; MUS MUSCULUS | mus musculus | mus musculus | west nile virus | Cherrier, M.V., Kaufmann, B., Nybakken, G.E., Lok, S.M., Warren, J.T., Nelson, C.A., Kostyuchenko, V.A., Holdaway, H.A., Chipman, P.R., Kuhn, R.J., Diamond, M.S., Rossmann, M.G., Fremont, D.H. | 15 | ELECTRON MICROSCOPY | null | null | false | true | IGHV7 | IGKV4 | Kappa | null | null | null | null | null | sabdab_dataset/3ixx/abangle/3ixx.abangle | sabdab_dataset/3ixx/annotation/3ixx_G_VH.ann | sabdab_dataset/3ixx/annotation/3ixx_H_VL.ann | sabdab_dataset/3ixx/imgt/3ixx_G_H.ann | sabdab_dataset/3ixx/imgt/3ixx_H_L.ann | sabdab_dataset/3ixx/sequence/3ixx_raw.pdb | sabdab_dataset/3ixx/sequence/3ixx_G_VH.fa | sabdab_dataset/3ixx/sequence/3ixx_H_VL.fa | sabdab_dataset/3ixx/structure/3ixx.pdb | sabdab_dataset/3ixx/structure/chothia/3ixx.pdb | false | false | train |
3ixx | I | J | 0 | E | B | protein | protein | NA | NA | peptide pr | envelope protein e | VIRUS | 02/26/09 | The pseudo-atomic structure of West Nile immature virus in complex with Fab fragments of the anti-fusion loop antibody E53 | WEST NILE VIRUS; MUS MUSCULUS | mus musculus | mus musculus | west nile virus | west nile virus | Cherrier, M.V., Kaufmann, B., Nybakken, G.E., Lok, S.M., Warren, J.T., Nelson, C.A., Kostyuchenko, V.A., Holdaway, H.A., Chipman, P.R., Kuhn, R.J., Diamond, M.S., Rossmann, M.G., Fremont, D.H. | 15 | ELECTRON MICROSCOPY | null | null | false | true | IGHV7 | IGKV4 | Kappa | null | null | null | null | null | sabdab_dataset/3ixx/abangle/3ixx.abangle | sabdab_dataset/3ixx/annotation/3ixx_I_VH.ann | sabdab_dataset/3ixx/annotation/3ixx_J_VL.ann | sabdab_dataset/3ixx/imgt/3ixx_I_H.ann | sabdab_dataset/3ixx/imgt/3ixx_J_L.ann | sabdab_dataset/3ixx/sequence/3ixx_raw.pdb | sabdab_dataset/3ixx/sequence/3ixx_I_VH.fa | sabdab_dataset/3ixx/sequence/3ixx_J_VL.fa | sabdab_dataset/3ixx/structure/3ixx.pdb | sabdab_dataset/3ixx/structure/chothia/3ixx.pdb | false | false | train |
3ixy | G | H | 0 | A | protein | null | envelope protein e | VIRUS | 02/26/09 | The pseudo-atomic structure of dengue immature virus in complex with Fab fragments of the anti-fusion loop antibody E53 | DENGUE VIRUS 2; MUS MUSCULUS | mus musculus | mus musculus | dengue virus 2 | Cherrier, M.V., Kaufmann, B., Nybakken, G.E., Lok, S.M., Warren, J.T., Nelson, C.A., Kostyuchenko, V.A., Holdaway, H.A., Chipman, P.R., Kuhn, R.J., Diamond, M.S., Rossmann, M.G., Fremont, D.H. | 23 | ELECTRON MICROSCOPY | null | null | false | true | IGHV7 | IGKV4 | Kappa | null | null | null | null | null | sabdab_dataset/3ixy/abangle/3ixy.abangle | sabdab_dataset/3ixy/annotation/3ixy_G_VH.ann | sabdab_dataset/3ixy/annotation/3ixy_H_VL.ann | sabdab_dataset/3ixy/imgt/3ixy_G_H.ann | sabdab_dataset/3ixy/imgt/3ixy_H_L.ann | sabdab_dataset/3ixy/sequence/3ixy_raw.pdb | sabdab_dataset/3ixy/sequence/3ixy_G_VH.fa | sabdab_dataset/3ixy/sequence/3ixy_H_VL.fa | sabdab_dataset/3ixy/structure/3ixy.pdb | sabdab_dataset/3ixy/structure/chothia/3ixy.pdb | false | false | train |
3ixy | I | J | 0 | B | protein | null | envelope protein e | VIRUS | 02/26/09 | The pseudo-atomic structure of dengue immature virus in complex with Fab fragments of the anti-fusion loop antibody E53 | DENGUE VIRUS 2; MUS MUSCULUS | mus musculus | mus musculus | dengue virus 2 | Cherrier, M.V., Kaufmann, B., Nybakken, G.E., Lok, S.M., Warren, J.T., Nelson, C.A., Kostyuchenko, V.A., Holdaway, H.A., Chipman, P.R., Kuhn, R.J., Diamond, M.S., Rossmann, M.G., Fremont, D.H. | 23 | ELECTRON MICROSCOPY | null | null | false | true | IGHV7 | IGKV4 | Kappa | null | null | null | null | null | sabdab_dataset/3ixy/abangle/3ixy.abangle | sabdab_dataset/3ixy/annotation/3ixy_I_VH.ann | sabdab_dataset/3ixy/annotation/3ixy_J_VL.ann | sabdab_dataset/3ixy/imgt/3ixy_I_H.ann | sabdab_dataset/3ixy/imgt/3ixy_J_L.ann | sabdab_dataset/3ixy/sequence/3ixy_raw.pdb | sabdab_dataset/3ixy/sequence/3ixy_I_VH.fa | sabdab_dataset/3ixy/sequence/3ixy_J_VL.fa | sabdab_dataset/3ixy/structure/3ixy.pdb | sabdab_dataset/3ixy/structure/chothia/3ixy.pdb | false | false | train |
3iy0 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 04/07/09 | Variable domains of the x-ray structure of Fab 14 fitted into the cryoEM reconstruction of the virus-Fab 14 complex | MUS MUSCULUS | mus musculus | mus musculus | null | Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G. | 12.5 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV6 | Kappa | null | null | null | null | null | sabdab_dataset/3iy0/abangle/3iy0.abangle | sabdab_dataset/3iy0/annotation/3iy0_H_VH.ann | sabdab_dataset/3iy0/annotation/3iy0_L_VL.ann | sabdab_dataset/3iy0/imgt/3iy0_H_H.ann | sabdab_dataset/3iy0/imgt/3iy0_L_L.ann | sabdab_dataset/3iy0/sequence/3iy0_raw.pdb | sabdab_dataset/3iy0/sequence/3iy0_H_VH.fa | sabdab_dataset/3iy0/sequence/3iy0_L_VL.fa | sabdab_dataset/3iy0/structure/3iy0.pdb | sabdab_dataset/3iy0/structure/chothia/3iy0.pdb | false | false | train |
3iy1 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 04/09/09 | Variable domains of the WAM of Fab B fitted into the cryoEM reconstruction of the virus-Fab B complex | RATTUS NORVEGICUS | rattus norvegicus | rattus norvegicus | null | Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Battisti, A.J., Parrish, C.R., Rossmann, M.G. | 18 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV19 | Kappa | null | null | null | null | null | sabdab_dataset/3iy1/abangle/3iy1.abangle | sabdab_dataset/3iy1/annotation/3iy1_B_VH.ann | sabdab_dataset/3iy1/annotation/3iy1_A_VL.ann | sabdab_dataset/3iy1/imgt/3iy1_B_H.ann | sabdab_dataset/3iy1/imgt/3iy1_A_L.ann | sabdab_dataset/3iy1/sequence/3iy1_raw.pdb | sabdab_dataset/3iy1/sequence/3iy1_B_VH.fa | sabdab_dataset/3iy1/sequence/3iy1_A_VL.fa | sabdab_dataset/3iy1/structure/3iy1.pdb | sabdab_dataset/3iy1/structure/chothia/3iy1.pdb | false | false | test |
3iy2 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 04/09/09 | Variable domains of the computer generated model (WAM) of Fab 6 fitted into the cryoEM reconstruction of the virus-Fab 6 complex | MUS MUSCULUS | mus musculus | mus musculus | null | Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G. | 18 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV12 | Kappa | null | null | null | null | null | sabdab_dataset/3iy2/abangle/3iy2.abangle | sabdab_dataset/3iy2/annotation/3iy2_B_VH.ann | sabdab_dataset/3iy2/annotation/3iy2_A_VL.ann | sabdab_dataset/3iy2/imgt/3iy2_B_H.ann | sabdab_dataset/3iy2/imgt/3iy2_A_L.ann | sabdab_dataset/3iy2/sequence/3iy2_raw.pdb | sabdab_dataset/3iy2/sequence/3iy2_B_VH.fa | sabdab_dataset/3iy2/sequence/3iy2_A_VL.fa | sabdab_dataset/3iy2/structure/3iy2.pdb | sabdab_dataset/3iy2/structure/chothia/3iy2.pdb | false | false | validation |
3iy3 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 04/09/09 | Variable domains of the computer generated model (WAM) of Fab 8 fitted into the cryoEM reconstruction of the virus-Fab 8 complex | MUS MUSCULUS | mus musculus | mus musculus | null | Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G. | 11.1 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/3iy3/abangle/3iy3.abangle | sabdab_dataset/3iy3/annotation/3iy3_B_VH.ann | sabdab_dataset/3iy3/annotation/3iy3_A_VL.ann | sabdab_dataset/3iy3/imgt/3iy3_B_H.ann | sabdab_dataset/3iy3/imgt/3iy3_A_L.ann | sabdab_dataset/3iy3/sequence/3iy3_raw.pdb | sabdab_dataset/3iy3/sequence/3iy3_B_VH.fa | sabdab_dataset/3iy3/sequence/3iy3_A_VL.fa | sabdab_dataset/3iy3/structure/3iy3.pdb | sabdab_dataset/3iy3/structure/chothia/3iy3.pdb | false | false | train |
3iy4 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 04/09/09 | Variable domains of the computer generated model (WAM) of Fab 15 fitted into the cryoEM reconstruction of the virus-Fab 15 complex | MUS MUSCULUS | mus musculus | mus musculus | null | Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G. | 11.7 | ELECTRON MICROSCOPY | null | null | false | false | IGHV9 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/3iy4/abangle/3iy4.abangle | sabdab_dataset/3iy4/annotation/3iy4_B_VH.ann | sabdab_dataset/3iy4/annotation/3iy4_A_VL.ann | sabdab_dataset/3iy4/imgt/3iy4_B_H.ann | sabdab_dataset/3iy4/imgt/3iy4_A_L.ann | sabdab_dataset/3iy4/sequence/3iy4_raw.pdb | sabdab_dataset/3iy4/sequence/3iy4_B_VH.fa | sabdab_dataset/3iy4/sequence/3iy4_A_VL.fa | sabdab_dataset/3iy4/structure/3iy4.pdb | sabdab_dataset/3iy4/structure/chothia/3iy4.pdb | false | false | train |
3iy5 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 04/09/09 | Variable domains of the mouse Fab (1AIF) fitted into the cryoEM reconstruction of the virus-Fab 16 complex | MUS MUSCULUS | mus musculus | mus musculus | null | Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G. | 18 | ELECTRON MICROSCOPY | null | null | false | false | IGHV6 | IGKV4 | Kappa | null | null | null | null | null | sabdab_dataset/3iy5/abangle/3iy5.abangle | sabdab_dataset/3iy5/annotation/3iy5_B_VH.ann | sabdab_dataset/3iy5/annotation/3iy5_A_VL.ann | sabdab_dataset/3iy5/imgt/3iy5_B_H.ann | sabdab_dataset/3iy5/imgt/3iy5_A_L.ann | sabdab_dataset/3iy5/sequence/3iy5_raw.pdb | sabdab_dataset/3iy5/sequence/3iy5_B_VH.fa | sabdab_dataset/3iy5/sequence/3iy5_A_VL.fa | sabdab_dataset/3iy5/structure/3iy5.pdb | sabdab_dataset/3iy5/structure/chothia/3iy5.pdb | false | false | train |
3iy6 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 04/09/09 | Variable domains of the computer generated model (WAM) of Fab E fitted into the cryoEM reconstruction of the virus-Fab E complex | RATTUS NORVEGICUS | rattus norvegicus | rattus norvegicus | null | Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G. | 12 | ELECTRON MICROSCOPY | null | null | false | false | IGHV2 | IGKV6 | Kappa | null | null | null | null | null | sabdab_dataset/3iy6/abangle/3iy6.abangle | sabdab_dataset/3iy6/annotation/3iy6_B_VH.ann | sabdab_dataset/3iy6/annotation/3iy6_A_VL.ann | sabdab_dataset/3iy6/imgt/3iy6_B_H.ann | sabdab_dataset/3iy6/imgt/3iy6_A_L.ann | sabdab_dataset/3iy6/sequence/3iy6_raw.pdb | sabdab_dataset/3iy6/sequence/3iy6_B_VH.fa | sabdab_dataset/3iy6/sequence/3iy6_A_VL.fa | sabdab_dataset/3iy6/structure/3iy6.pdb | sabdab_dataset/3iy6/structure/chothia/3iy6.pdb | false | false | validation |
3iy7 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 04/09/09 | Variable domains of the computer generated model (WAM) of Fab F fitted into the cryoEM reconstruction of the virus-Fab F complex | RATTUS NORVEGICUS | rattus norvegicus | rattus norvegicus | null | Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G. | 14 | ELECTRON MICROSCOPY | null | null | false | false | IGHV2 | IGKV22 | Kappa | null | null | null | null | null | sabdab_dataset/3iy7/abangle/3iy7.abangle | sabdab_dataset/3iy7/annotation/3iy7_B_VH.ann | sabdab_dataset/3iy7/annotation/3iy7_A_VL.ann | sabdab_dataset/3iy7/imgt/3iy7_B_H.ann | sabdab_dataset/3iy7/imgt/3iy7_A_L.ann | sabdab_dataset/3iy7/sequence/3iy7_raw.pdb | sabdab_dataset/3iy7/sequence/3iy7_B_VH.fa | sabdab_dataset/3iy7/sequence/3iy7_A_VL.fa | sabdab_dataset/3iy7/structure/3iy7.pdb | sabdab_dataset/3iy7/structure/chothia/3iy7.pdb | false | false | train |
3iyw | H | L | 0 | A | protein | null | polyprotein | VIRUS | 06/18/10 | West Nile virus in complex with Fab fragments of MAb CR4354 (fitted coordinates of envelope proteins and Fab fragments of one icosahedral ASU) | WEST NILE VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | west nile virus | Rossmann, M.G., Kaufmann, B. | 13.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/3iyw/abangle/3iyw.abangle | sabdab_dataset/3iyw/annotation/3iyw_H_VH.ann | sabdab_dataset/3iyw/annotation/3iyw_L_VL.ann | sabdab_dataset/3iyw/imgt/3iyw_H_H.ann | sabdab_dataset/3iyw/imgt/3iyw_L_L.ann | sabdab_dataset/3iyw/sequence/3iyw_raw.pdb | sabdab_dataset/3iyw/sequence/3iyw_H_VH.fa | sabdab_dataset/3iyw/sequence/3iyw_L_VL.fa | sabdab_dataset/3iyw/structure/3iyw.pdb | sabdab_dataset/3iyw/structure/chothia/3iyw.pdb | false | false | train |
3iyw | K | M | 0 | C | protein | null | polyprotein | VIRUS | 06/18/10 | West Nile virus in complex with Fab fragments of MAb CR4354 (fitted coordinates of envelope proteins and Fab fragments of one icosahedral ASU) | WEST NILE VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | west nile virus | Rossmann, M.G., Kaufmann, B. | 13.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null | sabdab_dataset/3iyw/abangle/3iyw.abangle | sabdab_dataset/3iyw/annotation/3iyw_K_VH.ann | sabdab_dataset/3iyw/annotation/3iyw_M_VL.ann | sabdab_dataset/3iyw/imgt/3iyw_K_H.ann | sabdab_dataset/3iyw/imgt/3iyw_M_L.ann | sabdab_dataset/3iyw/sequence/3iyw_raw.pdb | sabdab_dataset/3iyw/sequence/3iyw_K_VH.fa | sabdab_dataset/3iyw/sequence/3iyw_M_VL.fa | sabdab_dataset/3iyw/structure/3iyw.pdb | sabdab_dataset/3iyw/structure/chothia/3iyw.pdb | false | false | train |
3j1s | H | L | 0 | A | protein | null | capsid protein vp1 | VIRUS/IMMUNE SYSTEM | 05/23/12 | Structure of adeno-associated virus-2 in complex with neutralizing monoclonal antibody A20 | ADENO-ASSOCIATED VIRUS - 2; MUS MUSCULUS | mus musculus | mus musculus | adeno-associated virus - 2 | Chapman, M.S., McCraw, D.M. | 8.5 | ELECTRON MICROSCOPY / HOMOLOGY MODEL | null | null | false | false | IGHV3 | IGKV13 | Kappa | null | null | null | null | null | sabdab_dataset/3j1s/abangle/3j1s.abangle | sabdab_dataset/3j1s/annotation/3j1s_H_VH.ann | sabdab_dataset/3j1s/annotation/3j1s_L_VL.ann | sabdab_dataset/3j1s/imgt/3j1s_H_H.ann | sabdab_dataset/3j1s/imgt/3j1s_L_L.ann | sabdab_dataset/3j1s/sequence/3j1s_raw.pdb | sabdab_dataset/3j1s/sequence/3j1s_H_VH.fa | sabdab_dataset/3j1s/sequence/3j1s_L_VL.fa | sabdab_dataset/3j1s/structure/3j1s.pdb | sabdab_dataset/3j1s/structure/chothia/3j1s.pdb | false | false | validation |
3j2x | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 01/28/13 | Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab m242 | MUS MUSCULUS | mus musculus | mus musculus | null | Sun, S., Xiang, Y., Rossmann, M.G. | 15.6 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/3j2x/abangle/3j2x.abangle | sabdab_dataset/3j2x/annotation/3j2x_B_VH.ann | sabdab_dataset/3j2x/annotation/3j2x_A_VL.ann | sabdab_dataset/3j2x/imgt/3j2x_B_H.ann | sabdab_dataset/3j2x/imgt/3j2x_A_L.ann | sabdab_dataset/3j2x/sequence/3j2x_raw.pdb | sabdab_dataset/3j2x/sequence/3j2x_B_VH.fa | sabdab_dataset/3j2x/sequence/3j2x_A_VL.fa | sabdab_dataset/3j2x/structure/3j2x.pdb | sabdab_dataset/3j2x/structure/chothia/3j2x.pdb | false | false | train |
3j2x | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 01/28/13 | Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab m242 | MUS MUSCULUS | mus musculus | mus musculus | null | Sun, S., Xiang, Y., Rossmann, M.G. | 15.6 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/3j2x/abangle/3j2x.abangle | sabdab_dataset/3j2x/annotation/3j2x_D_VH.ann | sabdab_dataset/3j2x/annotation/3j2x_C_VL.ann | sabdab_dataset/3j2x/imgt/3j2x_D_H.ann | sabdab_dataset/3j2x/imgt/3j2x_C_L.ann | sabdab_dataset/3j2x/sequence/3j2x_raw.pdb | sabdab_dataset/3j2x/sequence/3j2x_D_VH.fa | sabdab_dataset/3j2x/sequence/3j2x_C_VL.fa | sabdab_dataset/3j2x/structure/3j2x.pdb | sabdab_dataset/3j2x/structure/chothia/3j2x.pdb | false | false | test |
3j2x | F | E | 0 | null | null | null | null | IMMUNE SYSTEM | 01/28/13 | Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab m242 | MUS MUSCULUS | mus musculus | mus musculus | null | Sun, S., Xiang, Y., Rossmann, M.G. | 15.6 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/3j2x/abangle/3j2x.abangle | sabdab_dataset/3j2x/annotation/3j2x_F_VH.ann | sabdab_dataset/3j2x/annotation/3j2x_E_VL.ann | sabdab_dataset/3j2x/imgt/3j2x_F_H.ann | sabdab_dataset/3j2x/imgt/3j2x_E_L.ann | sabdab_dataset/3j2x/sequence/3j2x_raw.pdb | sabdab_dataset/3j2x/sequence/3j2x_F_VH.fa | sabdab_dataset/3j2x/sequence/3j2x_E_VL.fa | sabdab_dataset/3j2x/structure/3j2x.pdb | sabdab_dataset/3j2x/structure/chothia/3j2x.pdb | false | false | train |
3j2x | H | G | 0 | null | null | null | null | IMMUNE SYSTEM | 01/28/13 | Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab m242 | MUS MUSCULUS | mus musculus | mus musculus | null | Sun, S., Xiang, Y., Rossmann, M.G. | 15.6 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/3j2x/abangle/3j2x.abangle | sabdab_dataset/3j2x/annotation/3j2x_H_VH.ann | sabdab_dataset/3j2x/annotation/3j2x_G_VL.ann | sabdab_dataset/3j2x/imgt/3j2x_H_H.ann | sabdab_dataset/3j2x/imgt/3j2x_G_L.ann | sabdab_dataset/3j2x/sequence/3j2x_raw.pdb | sabdab_dataset/3j2x/sequence/3j2x_H_VH.fa | sabdab_dataset/3j2x/sequence/3j2x_G_VL.fa | sabdab_dataset/3j2x/structure/3j2x.pdb | sabdab_dataset/3j2x/structure/chothia/3j2x.pdb | false | false | train |
3j2y | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 01/28/13 | Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab 9.8B | MUS MUSCULUS | mus musculus | mus musculus | null | Sun, S., Xiang, Y., Rossmann, M.G. | 14.9 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV4 | Kappa | null | null | null | null | null | sabdab_dataset/3j2y/abangle/3j2y.abangle | sabdab_dataset/3j2y/annotation/3j2y_B_VH.ann | sabdab_dataset/3j2y/annotation/3j2y_A_VL.ann | sabdab_dataset/3j2y/imgt/3j2y_B_H.ann | sabdab_dataset/3j2y/imgt/3j2y_A_L.ann | sabdab_dataset/3j2y/sequence/3j2y_raw.pdb | sabdab_dataset/3j2y/sequence/3j2y_B_VH.fa | sabdab_dataset/3j2y/sequence/3j2y_A_VL.fa | sabdab_dataset/3j2y/structure/3j2y.pdb | sabdab_dataset/3j2y/structure/chothia/3j2y.pdb | false | false | test |
3j2y | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 01/28/13 | Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab 9.8B | MUS MUSCULUS | mus musculus | mus musculus | null | Sun, S., Xiang, Y., Rossmann, M.G. | 14.9 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV4 | Kappa | null | null | null | null | null | sabdab_dataset/3j2y/abangle/3j2y.abangle | sabdab_dataset/3j2y/annotation/3j2y_D_VH.ann | sabdab_dataset/3j2y/annotation/3j2y_C_VL.ann | sabdab_dataset/3j2y/imgt/3j2y_D_H.ann | sabdab_dataset/3j2y/imgt/3j2y_C_L.ann | sabdab_dataset/3j2y/sequence/3j2y_raw.pdb | sabdab_dataset/3j2y/sequence/3j2y_D_VH.fa | sabdab_dataset/3j2y/sequence/3j2y_C_VL.fa | sabdab_dataset/3j2y/structure/3j2y.pdb | sabdab_dataset/3j2y/structure/chothia/3j2y.pdb | false | false | train |
3j2y | F | E | 0 | null | null | null | null | IMMUNE SYSTEM | 01/28/13 | Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab 9.8B | MUS MUSCULUS | mus musculus | mus musculus | null | Sun, S., Xiang, Y., Rossmann, M.G. | 14.9 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV4 | Kappa | null | null | null | null | null | sabdab_dataset/3j2y/abangle/3j2y.abangle | sabdab_dataset/3j2y/annotation/3j2y_F_VH.ann | sabdab_dataset/3j2y/annotation/3j2y_E_VL.ann | sabdab_dataset/3j2y/imgt/3j2y_F_H.ann | sabdab_dataset/3j2y/imgt/3j2y_E_L.ann | sabdab_dataset/3j2y/sequence/3j2y_raw.pdb | sabdab_dataset/3j2y/sequence/3j2y_F_VH.fa | sabdab_dataset/3j2y/sequence/3j2y_E_VL.fa | sabdab_dataset/3j2y/structure/3j2y.pdb | sabdab_dataset/3j2y/structure/chothia/3j2y.pdb | false | false | test |
3j2y | H | G | 0 | null | null | null | null | IMMUNE SYSTEM | 01/28/13 | Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab 9.8B | MUS MUSCULUS | mus musculus | mus musculus | null | Sun, S., Xiang, Y., Rossmann, M.G. | 14.9 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV4 | Kappa | null | null | null | null | null | sabdab_dataset/3j2y/abangle/3j2y.abangle | sabdab_dataset/3j2y/annotation/3j2y_H_VH.ann | sabdab_dataset/3j2y/annotation/3j2y_G_VL.ann | sabdab_dataset/3j2y/imgt/3j2y_H_H.ann | sabdab_dataset/3j2y/imgt/3j2y_G_L.ann | sabdab_dataset/3j2y/sequence/3j2y_raw.pdb | sabdab_dataset/3j2y/sequence/3j2y_H_VH.fa | sabdab_dataset/3j2y/sequence/3j2y_G_VL.fa | sabdab_dataset/3j2y/structure/3j2y.pdb | sabdab_dataset/3j2y/structure/chothia/3j2y.pdb | false | false | train |
3j2z | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 01/28/13 | Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab m10 | MUS MUSCULUS | mus musculus | mus musculus | null | Sun, S., Xiang, Y., Rossmann, M.G. | 16.9 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV4 | Kappa | null | null | null | null | null | sabdab_dataset/3j2z/abangle/3j2z.abangle | sabdab_dataset/3j2z/annotation/3j2z_B_VH.ann | sabdab_dataset/3j2z/annotation/3j2z_A_VL.ann | sabdab_dataset/3j2z/imgt/3j2z_B_H.ann | sabdab_dataset/3j2z/imgt/3j2z_A_L.ann | sabdab_dataset/3j2z/sequence/3j2z_raw.pdb | sabdab_dataset/3j2z/sequence/3j2z_B_VH.fa | sabdab_dataset/3j2z/sequence/3j2z_A_VL.fa | sabdab_dataset/3j2z/structure/3j2z.pdb | sabdab_dataset/3j2z/structure/chothia/3j2z.pdb | false | false | train |
3j2z | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 01/28/13 | Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab m10 | MUS MUSCULUS | mus musculus | mus musculus | null | Sun, S., Xiang, Y., Rossmann, M.G. | 16.9 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV4 | Kappa | null | null | null | null | null | sabdab_dataset/3j2z/abangle/3j2z.abangle | sabdab_dataset/3j2z/annotation/3j2z_D_VH.ann | sabdab_dataset/3j2z/annotation/3j2z_C_VL.ann | sabdab_dataset/3j2z/imgt/3j2z_D_H.ann | sabdab_dataset/3j2z/imgt/3j2z_C_L.ann | sabdab_dataset/3j2z/sequence/3j2z_raw.pdb | sabdab_dataset/3j2z/sequence/3j2z_D_VH.fa | sabdab_dataset/3j2z/sequence/3j2z_C_VL.fa | sabdab_dataset/3j2z/structure/3j2z.pdb | sabdab_dataset/3j2z/structure/chothia/3j2z.pdb | false | false | train |
3j2z | F | E | 0 | null | null | null | null | IMMUNE SYSTEM | 01/28/13 | Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab m10 | MUS MUSCULUS | mus musculus | mus musculus | null | Sun, S., Xiang, Y., Rossmann, M.G. | 16.9 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV4 | Kappa | null | null | null | null | null | sabdab_dataset/3j2z/abangle/3j2z.abangle | sabdab_dataset/3j2z/annotation/3j2z_F_VH.ann | sabdab_dataset/3j2z/annotation/3j2z_E_VL.ann | sabdab_dataset/3j2z/imgt/3j2z_F_H.ann | sabdab_dataset/3j2z/imgt/3j2z_E_L.ann | sabdab_dataset/3j2z/sequence/3j2z_raw.pdb | sabdab_dataset/3j2z/sequence/3j2z_F_VH.fa | sabdab_dataset/3j2z/sequence/3j2z_E_VL.fa | sabdab_dataset/3j2z/structure/3j2z.pdb | sabdab_dataset/3j2z/structure/chothia/3j2z.pdb | false | false | train |
3j2z | H | G | 0 | null | null | null | null | IMMUNE SYSTEM | 01/28/13 | Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab m10 | MUS MUSCULUS | mus musculus | mus musculus | null | Sun, S., Xiang, Y., Rossmann, M.G. | 16.9 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV4 | Kappa | null | null | null | null | null | sabdab_dataset/3j2z/abangle/3j2z.abangle | sabdab_dataset/3j2z/annotation/3j2z_H_VH.ann | sabdab_dataset/3j2z/annotation/3j2z_G_VL.ann | sabdab_dataset/3j2z/imgt/3j2z_H_H.ann | sabdab_dataset/3j2z/imgt/3j2z_G_L.ann | sabdab_dataset/3j2z/sequence/3j2z_raw.pdb | sabdab_dataset/3j2z/sequence/3j2z_H_VH.fa | sabdab_dataset/3j2z/sequence/3j2z_G_VL.fa | sabdab_dataset/3j2z/structure/3j2z.pdb | sabdab_dataset/3j2z/structure/chothia/3j2z.pdb | false | false | test |
3j30 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 01/28/13 | Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab CHK152 | MUS MUSCULUS | mus musculus | mus musculus | null | Sun, S., Xiang, Y., Rossmann, M.G. | 16 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/3j30/abangle/3j30.abangle | sabdab_dataset/3j30/annotation/3j30_B_VH.ann | sabdab_dataset/3j30/annotation/3j30_A_VL.ann | sabdab_dataset/3j30/imgt/3j30_B_H.ann | sabdab_dataset/3j30/imgt/3j30_A_L.ann | sabdab_dataset/3j30/sequence/3j30_raw.pdb | sabdab_dataset/3j30/sequence/3j30_B_VH.fa | sabdab_dataset/3j30/sequence/3j30_A_VL.fa | sabdab_dataset/3j30/structure/3j30.pdb | sabdab_dataset/3j30/structure/chothia/3j30.pdb | false | false | train |
3j30 | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 01/28/13 | Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab CHK152 | MUS MUSCULUS | mus musculus | mus musculus | null | Sun, S., Xiang, Y., Rossmann, M.G. | 16 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/3j30/abangle/3j30.abangle | sabdab_dataset/3j30/annotation/3j30_D_VH.ann | sabdab_dataset/3j30/annotation/3j30_C_VL.ann | sabdab_dataset/3j30/imgt/3j30_D_H.ann | sabdab_dataset/3j30/imgt/3j30_C_L.ann | sabdab_dataset/3j30/sequence/3j30_raw.pdb | sabdab_dataset/3j30/sequence/3j30_D_VH.fa | sabdab_dataset/3j30/sequence/3j30_C_VL.fa | sabdab_dataset/3j30/structure/3j30.pdb | sabdab_dataset/3j30/structure/chothia/3j30.pdb | false | false | train |
3j30 | F | E | 0 | null | null | null | null | IMMUNE SYSTEM | 01/28/13 | Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab CHK152 | MUS MUSCULUS | mus musculus | mus musculus | null | Sun, S., Xiang, Y., Rossmann, M.G. | 16 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/3j30/abangle/3j30.abangle | sabdab_dataset/3j30/annotation/3j30_F_VH.ann | sabdab_dataset/3j30/annotation/3j30_E_VL.ann | sabdab_dataset/3j30/imgt/3j30_F_H.ann | sabdab_dataset/3j30/imgt/3j30_E_L.ann | sabdab_dataset/3j30/sequence/3j30_raw.pdb | sabdab_dataset/3j30/sequence/3j30_F_VH.fa | sabdab_dataset/3j30/sequence/3j30_E_VL.fa | sabdab_dataset/3j30/structure/3j30.pdb | sabdab_dataset/3j30/structure/chothia/3j30.pdb | false | false | train |
3j30 | H | G | 0 | null | null | null | null | IMMUNE SYSTEM | 01/28/13 | Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab CHK152 | MUS MUSCULUS | mus musculus | mus musculus | null | Sun, S., Xiang, Y., Rossmann, M.G. | 16 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null | sabdab_dataset/3j30/abangle/3j30.abangle | sabdab_dataset/3j30/annotation/3j30_H_VH.ann | sabdab_dataset/3j30/annotation/3j30_G_VL.ann | sabdab_dataset/3j30/imgt/3j30_H_H.ann | sabdab_dataset/3j30/imgt/3j30_G_L.ann | sabdab_dataset/3j30/sequence/3j30_raw.pdb | sabdab_dataset/3j30/sequence/3j30_H_VH.fa | sabdab_dataset/3j30/sequence/3j30_G_VL.fa | sabdab_dataset/3j30/structure/3j30.pdb | sabdab_dataset/3j30/structure/chothia/3j30.pdb | false | false | train |
3j3o | H | L | 0 | 1 | protein | null | protein vp1 | VIRUS/IMMUNE SYSTEM | 04/10/13 | Conformational Shift of a Major Poliovirus Antigen Confirmed by Immuno-Cryogenic Electron Microscopy: 160S Poliovirus and C3-Fab Complex | MUS MUSCULUS; UNIDENTIFIED; HUMAN POLIOVIRUS 1 | mus musculus | mus musculus | human poliovirus 1 | Lin, J., Cheng, N., Hogle, J.M., Steven, A.C., Belnap, D.M. | 11.1 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/3j3o/abangle/3j3o.abangle | sabdab_dataset/3j3o/annotation/3j3o_H_VH.ann | sabdab_dataset/3j3o/annotation/3j3o_L_VL.ann | sabdab_dataset/3j3o/imgt/3j3o_H_H.ann | sabdab_dataset/3j3o/imgt/3j3o_L_L.ann | sabdab_dataset/3j3o/sequence/3j3o_raw.pdb | sabdab_dataset/3j3o/sequence/3j3o_H_VH.fa | sabdab_dataset/3j3o/sequence/3j3o_L_VL.fa | sabdab_dataset/3j3o/structure/3j3o.pdb | sabdab_dataset/3j3o/structure/chothia/3j3o.pdb | false | false | train |
3j3p | H | L | 0 | 1 | protein | null | protein vp1 | VIRUS/IMMUNE SYSTEM | 04/10/13 | Conformational Shift of a Major Poliovirus Antigen Confirmed by Immuno-Cryogenic Electron Microscopy: 135S Poliovirus and C3-Fab Complex | MUS MUSCULUS; HUMAN POLIOVIRUS 1 | mus musculus | mus musculus | human poliovirus 1 | Lin, J., Cheng, N., Hogle, J.M., Steven, A.C., Belnap, D.M. | 9.1 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/3j3p/abangle/3j3p.abangle | sabdab_dataset/3j3p/annotation/3j3p_H_VH.ann | sabdab_dataset/3j3p/annotation/3j3p_L_VL.ann | sabdab_dataset/3j3p/imgt/3j3p_H_H.ann | sabdab_dataset/3j3p/imgt/3j3p_L_L.ann | sabdab_dataset/3j3p/sequence/3j3p_raw.pdb | sabdab_dataset/3j3p/sequence/3j3p_H_VH.fa | sabdab_dataset/3j3p/sequence/3j3p_L_VL.fa | sabdab_dataset/3j3p/structure/3j3p.pdb | sabdab_dataset/3j3p/structure/chothia/3j3p.pdb | false | false | train |
3j3z | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 05/21/13 | Structure of MA28-7 neutralizing antibody Fab fragment from electron cryo-microscopy of enterovirus 71 complexed with a Fab fragment | UNIDENTIFIED | unidentified | unidentified | null | Lee, H., Cifuente, J.O., Ashley, R.E., Conway, J.F., Makhov, A.M., Tano, Y., Shimizu, H., Nishimura, Y., Hafenstein, S. | 23.4 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV6 | Kappa | null | null | null | null | null | sabdab_dataset/3j3z/abangle/3j3z.abangle | sabdab_dataset/3j3z/annotation/3j3z_H_VH.ann | sabdab_dataset/3j3z/annotation/3j3z_L_VL.ann | sabdab_dataset/3j3z/imgt/3j3z_H_H.ann | sabdab_dataset/3j3z/imgt/3j3z_L_L.ann | sabdab_dataset/3j3z/sequence/3j3z_raw.pdb | sabdab_dataset/3j3z/sequence/3j3z_H_VH.fa | sabdab_dataset/3j3z/sequence/3j3z_L_VL.fa | sabdab_dataset/3j3z/structure/3j3z.pdb | sabdab_dataset/3j3z/structure/chothia/3j3z.pdb | false | false | validation |
3j42 | G | H | 0 | E | protein | null | prm | VIRUS/IMMUNE SYSTEM | 06/13/13 | Obstruction of Dengue Virus Maturation by Fab Fragments of the 2H2 Antibody | MUS MUSCULUS; DENGUE VIRUS 2 | mus musculus | mus musculus | dengue virus 2 | Wang, Z., Pennington, J.G., Jiang, W., Rossmann, M.G. | 21 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV6 | Kappa | null | null | null | null | null | sabdab_dataset/3j42/abangle/3j42.abangle | sabdab_dataset/3j42/annotation/3j42_G_VH.ann | sabdab_dataset/3j42/annotation/3j42_H_VL.ann | sabdab_dataset/3j42/imgt/3j42_G_H.ann | sabdab_dataset/3j42/imgt/3j42_H_L.ann | sabdab_dataset/3j42/sequence/3j42_raw.pdb | sabdab_dataset/3j42/sequence/3j42_G_VH.fa | sabdab_dataset/3j42/sequence/3j42_H_VL.fa | sabdab_dataset/3j42/structure/3j42.pdb | sabdab_dataset/3j42/structure/chothia/3j42.pdb | false | false | train |
3j42 | I | J | 0 | D | protein | null | prm | VIRUS/IMMUNE SYSTEM | 06/13/13 | Obstruction of Dengue Virus Maturation by Fab Fragments of the 2H2 Antibody | MUS MUSCULUS; DENGUE VIRUS 2 | mus musculus | mus musculus | dengue virus 2 | Wang, Z., Pennington, J.G., Jiang, W., Rossmann, M.G. | 21 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV6 | Kappa | null | null | null | null | null | sabdab_dataset/3j42/abangle/3j42.abangle | sabdab_dataset/3j42/annotation/3j42_I_VH.ann | sabdab_dataset/3j42/annotation/3j42_J_VL.ann | sabdab_dataset/3j42/imgt/3j42_I_H.ann | sabdab_dataset/3j42/imgt/3j42_J_L.ann | sabdab_dataset/3j42/sequence/3j42_raw.pdb | sabdab_dataset/3j42/sequence/3j42_I_VH.fa | sabdab_dataset/3j42/sequence/3j42_J_VL.fa | sabdab_dataset/3j42/structure/3j42.pdb | sabdab_dataset/3j42/structure/chothia/3j42.pdb | false | false | train |
3j42 | K | L | 0 | F | protein | null | prm | VIRUS/IMMUNE SYSTEM | 06/13/13 | Obstruction of Dengue Virus Maturation by Fab Fragments of the 2H2 Antibody | MUS MUSCULUS; DENGUE VIRUS 2 | mus musculus | mus musculus | dengue virus 2 | Wang, Z., Pennington, J.G., Jiang, W., Rossmann, M.G. | 21 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV6 | Kappa | null | null | null | null | null | sabdab_dataset/3j42/abangle/3j42.abangle | sabdab_dataset/3j42/annotation/3j42_K_VH.ann | sabdab_dataset/3j42/annotation/3j42_L_VL.ann | sabdab_dataset/3j42/imgt/3j42_K_H.ann | sabdab_dataset/3j42/imgt/3j42_L_L.ann | sabdab_dataset/3j42/sequence/3j42_raw.pdb | sabdab_dataset/3j42/sequence/3j42_K_VH.fa | sabdab_dataset/3j42/sequence/3j42_L_VL.fa | sabdab_dataset/3j42/structure/3j42.pdb | sabdab_dataset/3j42/structure/chothia/3j42.pdb | false | false | train |
3j5m | D | C | 0 | A | protein | null | bg505 sosip gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 10/26/13 | Cryo-EM structure of the BG505 SOSIP.664 HIV-1 Env trimer with 3 PGV04 Fabs | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Lyumkis, D., Julien, J.-P., Wilson, I.A., Ward, A.B. | 5.8 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/3j5m/abangle/3j5m.abangle | sabdab_dataset/3j5m/annotation/3j5m_D_VH.ann | sabdab_dataset/3j5m/annotation/3j5m_C_VL.ann | sabdab_dataset/3j5m/imgt/3j5m_D_H.ann | sabdab_dataset/3j5m/imgt/3j5m_C_L.ann | sabdab_dataset/3j5m/sequence/3j5m_raw.pdb | sabdab_dataset/3j5m/sequence/3j5m_D_VH.fa | sabdab_dataset/3j5m/sequence/3j5m_C_VL.fa | sabdab_dataset/3j5m/structure/3j5m.pdb | sabdab_dataset/3j5m/structure/chothia/3j5m.pdb | false | false | train |
3j5m | H | G | 0 | E | protein | null | bg505 sosip gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 10/26/13 | Cryo-EM structure of the BG505 SOSIP.664 HIV-1 Env trimer with 3 PGV04 Fabs | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Lyumkis, D., Julien, J.-P., Wilson, I.A., Ward, A.B. | 5.8 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/3j5m/abangle/3j5m.abangle | sabdab_dataset/3j5m/annotation/3j5m_H_VH.ann | sabdab_dataset/3j5m/annotation/3j5m_G_VL.ann | sabdab_dataset/3j5m/imgt/3j5m_H_H.ann | sabdab_dataset/3j5m/imgt/3j5m_G_L.ann | sabdab_dataset/3j5m/sequence/3j5m_raw.pdb | sabdab_dataset/3j5m/sequence/3j5m_H_VH.fa | sabdab_dataset/3j5m/sequence/3j5m_G_VL.fa | sabdab_dataset/3j5m/structure/3j5m.pdb | sabdab_dataset/3j5m/structure/chothia/3j5m.pdb | false | false | validation |
3j5m | L | K | 0 | I | protein | null | bg505 sosip gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 10/26/13 | Cryo-EM structure of the BG505 SOSIP.664 HIV-1 Env trimer with 3 PGV04 Fabs | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Lyumkis, D., Julien, J.-P., Wilson, I.A., Ward, A.B. | 5.8 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/3j5m/abangle/3j5m.abangle | sabdab_dataset/3j5m/annotation/3j5m_L_VH.ann | sabdab_dataset/3j5m/annotation/3j5m_K_VL.ann | sabdab_dataset/3j5m/imgt/3j5m_L_H.ann | sabdab_dataset/3j5m/imgt/3j5m_K_L.ann | sabdab_dataset/3j5m/sequence/3j5m_raw.pdb | sabdab_dataset/3j5m/sequence/3j5m_L_VH.fa | sabdab_dataset/3j5m/sequence/3j5m_K_VL.fa | sabdab_dataset/3j5m/structure/3j5m.pdb | sabdab_dataset/3j5m/structure/chothia/3j5m.pdb | false | false | train |
3j6u | H | L | 0 | C | A | protein | protein | NA | NA | envelope protein | envelope protein | VIRUS/IMMUNE SYSTEM | 03/26/14 | Cryo-EM structure of Dengue virus serotype 3 in complex with human antibody 5J7 Fab | HOMO SAPIENS; DENGUE VIRUS 3 | homo sapiens | homo sapiens | dengue virus 3 | dengue virus 3 | Fibriansah, G., Tan, J.L., Smith, S.A., de Alwis, R., Ng, T.-S., Kostyuchenko, V.A., Kukkaro, P., de Silva, A.M., Crowe Jr., J.E., Lok, S.-M. | 9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/3j6u/abangle/3j6u.abangle | sabdab_dataset/3j6u/annotation/3j6u_H_VH.ann | sabdab_dataset/3j6u/annotation/3j6u_L_VL.ann | sabdab_dataset/3j6u/imgt/3j6u_H_H.ann | sabdab_dataset/3j6u/imgt/3j6u_L_L.ann | sabdab_dataset/3j6u/sequence/3j6u_raw.pdb | sabdab_dataset/3j6u/sequence/3j6u_H_VH.fa | sabdab_dataset/3j6u/sequence/3j6u_L_VL.fa | sabdab_dataset/3j6u/structure/3j6u.pdb | sabdab_dataset/3j6u/structure/chothia/3j6u.pdb | false | false | train |
3j70 | A | B | 0 | D | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 04/22/14 | Model of gp120, including variable regions, in complex with CD4 and 17b | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Rasheed, M., Bettadapura, R., Bajaj, C. | NOT | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/3j70/abangle/3j70.abangle | sabdab_dataset/3j70/annotation/3j70_A_VH.ann | sabdab_dataset/3j70/annotation/3j70_B_VL.ann | sabdab_dataset/3j70/imgt/3j70_A_H.ann | sabdab_dataset/3j70/imgt/3j70_B_L.ann | sabdab_dataset/3j70/sequence/3j70_raw.pdb | sabdab_dataset/3j70/sequence/3j70_A_VH.fa | sabdab_dataset/3j70/sequence/3j70_B_VL.fa | sabdab_dataset/3j70/structure/3j70.pdb | sabdab_dataset/3j70/structure/chothia/3j70.pdb | false | false | test |
3j70 | M | N | 0 | P | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 04/22/14 | Model of gp120, including variable regions, in complex with CD4 and 17b | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Rasheed, M., Bettadapura, R., Bajaj, C. | NOT | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/3j70/abangle/3j70.abangle | sabdab_dataset/3j70/annotation/3j70_M_VH.ann | sabdab_dataset/3j70/annotation/3j70_N_VL.ann | sabdab_dataset/3j70/imgt/3j70_M_H.ann | sabdab_dataset/3j70/imgt/3j70_N_L.ann | sabdab_dataset/3j70/sequence/3j70_raw.pdb | sabdab_dataset/3j70/sequence/3j70_M_VH.fa | sabdab_dataset/3j70/sequence/3j70_N_VL.fa | sabdab_dataset/3j70/structure/3j70.pdb | sabdab_dataset/3j70/structure/chothia/3j70.pdb | false | false | train |
3j70 | R | S | 0 | U | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 04/22/14 | Model of gp120, including variable regions, in complex with CD4 and 17b | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Rasheed, M., Bettadapura, R., Bajaj, C. | NOT | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/3j70/abangle/3j70.abangle | sabdab_dataset/3j70/annotation/3j70_R_VH.ann | sabdab_dataset/3j70/annotation/3j70_S_VL.ann | sabdab_dataset/3j70/imgt/3j70_R_H.ann | sabdab_dataset/3j70/imgt/3j70_S_L.ann | sabdab_dataset/3j70/sequence/3j70_raw.pdb | sabdab_dataset/3j70/sequence/3j70_R_VH.fa | sabdab_dataset/3j70/sequence/3j70_S_VL.fa | sabdab_dataset/3j70/structure/3j70.pdb | sabdab_dataset/3j70/structure/chothia/3j70.pdb | false | false | train |
3j7e | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 06/23/14 | Electron cryo-microscopy of human papillomavirus 16 and H16.V5 Fab fragments | MUS MUSCULUS | mus musculus | mus musculus | null | Lee, H., Brendle, S.A., Bywaters, S.M., Christensen, N.D., Hafenstein, S. | 13.6 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null | sabdab_dataset/3j7e/abangle/3j7e.abangle | sabdab_dataset/3j7e/annotation/3j7e_B_VH.ann | sabdab_dataset/3j7e/annotation/3j7e_A_VL.ann | sabdab_dataset/3j7e/imgt/3j7e_B_H.ann | sabdab_dataset/3j7e/imgt/3j7e_A_L.ann | sabdab_dataset/3j7e/sequence/3j7e_raw.pdb | sabdab_dataset/3j7e/sequence/3j7e_B_VH.fa | sabdab_dataset/3j7e/sequence/3j7e_A_VL.fa | sabdab_dataset/3j7e/structure/3j7e.pdb | sabdab_dataset/3j7e/structure/chothia/3j7e.pdb | false | false | train |
3j7e | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 06/23/14 | Electron cryo-microscopy of human papillomavirus 16 and H16.V5 Fab fragments | MUS MUSCULUS | mus musculus | mus musculus | null | Lee, H., Brendle, S.A., Bywaters, S.M., Christensen, N.D., Hafenstein, S. | 13.6 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null | sabdab_dataset/3j7e/abangle/3j7e.abangle | sabdab_dataset/3j7e/annotation/3j7e_D_VH.ann | sabdab_dataset/3j7e/annotation/3j7e_C_VL.ann | sabdab_dataset/3j7e/imgt/3j7e_D_H.ann | sabdab_dataset/3j7e/imgt/3j7e_C_L.ann | sabdab_dataset/3j7e/sequence/3j7e_raw.pdb | sabdab_dataset/3j7e/sequence/3j7e_D_VH.fa | sabdab_dataset/3j7e/sequence/3j7e_C_VL.fa | sabdab_dataset/3j7e/structure/3j7e.pdb | sabdab_dataset/3j7e/structure/chothia/3j7e.pdb | false | false | train |
3j7e | F | E | 0 | null | null | null | null | IMMUNE SYSTEM | 06/23/14 | Electron cryo-microscopy of human papillomavirus 16 and H16.V5 Fab fragments | MUS MUSCULUS | mus musculus | mus musculus | null | Lee, H., Brendle, S.A., Bywaters, S.M., Christensen, N.D., Hafenstein, S. | 13.6 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null | sabdab_dataset/3j7e/abangle/3j7e.abangle | sabdab_dataset/3j7e/annotation/3j7e_F_VH.ann | sabdab_dataset/3j7e/annotation/3j7e_E_VL.ann | sabdab_dataset/3j7e/imgt/3j7e_F_H.ann | sabdab_dataset/3j7e/imgt/3j7e_E_L.ann | sabdab_dataset/3j7e/sequence/3j7e_raw.pdb | sabdab_dataset/3j7e/sequence/3j7e_F_VH.fa | sabdab_dataset/3j7e/sequence/3j7e_E_VL.fa | sabdab_dataset/3j7e/structure/3j7e.pdb | sabdab_dataset/3j7e/structure/chothia/3j7e.pdb | false | false | validation |
3j7e | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 06/23/14 | Electron cryo-microscopy of human papillomavirus 16 and H16.V5 Fab fragments | MUS MUSCULUS | mus musculus | mus musculus | null | Lee, H., Brendle, S.A., Bywaters, S.M., Christensen, N.D., Hafenstein, S. | 13.6 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null | sabdab_dataset/3j7e/abangle/3j7e.abangle | sabdab_dataset/3j7e/annotation/3j7e_H_VH.ann | sabdab_dataset/3j7e/annotation/3j7e_L_VL.ann | sabdab_dataset/3j7e/imgt/3j7e_H_H.ann | sabdab_dataset/3j7e/imgt/3j7e_L_L.ann | sabdab_dataset/3j7e/sequence/3j7e_raw.pdb | sabdab_dataset/3j7e/sequence/3j7e_H_VH.fa | sabdab_dataset/3j7e/sequence/3j7e_L_VL.fa | sabdab_dataset/3j7e/structure/3j7e.pdb | sabdab_dataset/3j7e/structure/chothia/3j7e.pdb | false | false | train |
3j8d | a | A | 0 | B | protein | null | glycoprotein diii | VIRUS/IMMUNE SYSTEM | 10/13/14 | Cryoelectron microscopy of dengue-Fab E104 complex at pH 5.5 | DENGUE VIRUS 2 THAILAND/16681/84; UNIDENTIFIED | null | unidentified | dengue virus 2 thailand/16681/84 | Zhang, X.Z., Sheng, J., Austin, S.K., Hoornweg, T., Smit, J.M., Kuhn, R.J., Diamond, M.S., Rossmann, M.G. | 26 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/3j8d/abangle/3j8d.abangle | sabdab_dataset/3j8d/annotation/3j8d_A_VH.ann | sabdab_dataset/3j8d/annotation/3j8d_A_VL.ann | sabdab_dataset/3j8d/imgt/3j8d_A_H.ann | sabdab_dataset/3j8d/imgt/3j8d_A_L.ann | sabdab_dataset/3j8d/sequence/3j8d_raw.pdb | sabdab_dataset/3j8d/sequence/3j8d_A_VH.fa | sabdab_dataset/3j8d/sequence/3j8d_A_VL.fa | sabdab_dataset/3j8d/structure/3j8d.pdb | sabdab_dataset/3j8d/structure/chothia/3j8d.pdb | false | false | test |
3j8d | d | D | 0 | F | protein | null | glycoprotein diii | VIRUS/IMMUNE SYSTEM | 10/13/14 | Cryoelectron microscopy of dengue-Fab E104 complex at pH 5.5 | DENGUE VIRUS 2 THAILAND/16681/84; UNIDENTIFIED | null | unidentified | dengue virus 2 thailand/16681/84 | Zhang, X.Z., Sheng, J., Austin, S.K., Hoornweg, T., Smit, J.M., Kuhn, R.J., Diamond, M.S., Rossmann, M.G. | 26 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/3j8d/abangle/3j8d.abangle | sabdab_dataset/3j8d/annotation/3j8d_D_VH.ann | sabdab_dataset/3j8d/annotation/3j8d_D_VL.ann | sabdab_dataset/3j8d/imgt/3j8d_D_H.ann | sabdab_dataset/3j8d/imgt/3j8d_D_L.ann | sabdab_dataset/3j8d/sequence/3j8d_raw.pdb | sabdab_dataset/3j8d/sequence/3j8d_D_VH.fa | sabdab_dataset/3j8d/sequence/3j8d_D_VL.fa | sabdab_dataset/3j8d/structure/3j8d.pdb | sabdab_dataset/3j8d/structure/chothia/3j8d.pdb | false | false | validation |
3j8v | F | J | 0 | D | protein | null | l1 | VIRUS/IMMUNE SYSTEM | 11/19/14 | Cryo-EM reconstruction of quasi-HPV16 complex with H16.14J Fab | HUMAN PAPILLOMAVIRUS TYPE 16; MUS MUSCULUS | mus musculus | mus musculus | human papillomavirus type 16 | Guan, J., Hafenstein, S. | 13.9 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV13 | Kappa | null | null | null | null | null | sabdab_dataset/3j8v/abangle/3j8v.abangle | sabdab_dataset/3j8v/annotation/3j8v_F_VH.ann | sabdab_dataset/3j8v/annotation/3j8v_J_VL.ann | sabdab_dataset/3j8v/imgt/3j8v_F_H.ann | sabdab_dataset/3j8v/imgt/3j8v_J_L.ann | sabdab_dataset/3j8v/sequence/3j8v_raw.pdb | sabdab_dataset/3j8v/sequence/3j8v_F_VH.fa | sabdab_dataset/3j8v/sequence/3j8v_J_VL.fa | sabdab_dataset/3j8v/structure/3j8v.pdb | sabdab_dataset/3j8v/structure/chothia/3j8v.pdb | false | false | train |
3j8v | G | K | 0 | C | protein | null | l1 | VIRUS/IMMUNE SYSTEM | 11/19/14 | Cryo-EM reconstruction of quasi-HPV16 complex with H16.14J Fab | HUMAN PAPILLOMAVIRUS TYPE 16; MUS MUSCULUS | mus musculus | mus musculus | human papillomavirus type 16 | Guan, J., Hafenstein, S. | 13.9 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV13 | Kappa | null | null | null | null | null | sabdab_dataset/3j8v/abangle/3j8v.abangle | sabdab_dataset/3j8v/annotation/3j8v_G_VH.ann | sabdab_dataset/3j8v/annotation/3j8v_K_VL.ann | sabdab_dataset/3j8v/imgt/3j8v_G_H.ann | sabdab_dataset/3j8v/imgt/3j8v_K_L.ann | sabdab_dataset/3j8v/sequence/3j8v_raw.pdb | sabdab_dataset/3j8v/sequence/3j8v_G_VH.fa | sabdab_dataset/3j8v/sequence/3j8v_K_VL.fa | sabdab_dataset/3j8v/structure/3j8v.pdb | sabdab_dataset/3j8v/structure/chothia/3j8v.pdb | false | false | test |
3j8v | H | L | 0 | E | protein | null | l1 | VIRUS/IMMUNE SYSTEM | 11/19/14 | Cryo-EM reconstruction of quasi-HPV16 complex with H16.14J Fab | HUMAN PAPILLOMAVIRUS TYPE 16; MUS MUSCULUS | mus musculus | mus musculus | human papillomavirus type 16 | Guan, J., Hafenstein, S. | 13.9 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV13 | Kappa | null | null | null | null | null | sabdab_dataset/3j8v/abangle/3j8v.abangle | sabdab_dataset/3j8v/annotation/3j8v_H_VH.ann | sabdab_dataset/3j8v/annotation/3j8v_L_VL.ann | sabdab_dataset/3j8v/imgt/3j8v_H_H.ann | sabdab_dataset/3j8v/imgt/3j8v_L_L.ann | sabdab_dataset/3j8v/sequence/3j8v_raw.pdb | sabdab_dataset/3j8v/sequence/3j8v_H_VH.fa | sabdab_dataset/3j8v/sequence/3j8v_L_VL.fa | sabdab_dataset/3j8v/structure/3j8v.pdb | sabdab_dataset/3j8v/structure/chothia/3j8v.pdb | false | false | validation |
3j8v | I | M | 0 | B | A | protein | protein | NA | NA | l1 | l1 | VIRUS/IMMUNE SYSTEM | 11/19/14 | Cryo-EM reconstruction of quasi-HPV16 complex with H16.14J Fab | HUMAN PAPILLOMAVIRUS TYPE 16; MUS MUSCULUS | mus musculus | mus musculus | human papillomavirus type 16 | human papillomavirus type 16 | Guan, J., Hafenstein, S. | 13.9 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV13 | Kappa | null | null | null | null | null | sabdab_dataset/3j8v/abangle/3j8v.abangle | sabdab_dataset/3j8v/annotation/3j8v_I_VH.ann | sabdab_dataset/3j8v/annotation/3j8v_M_VL.ann | sabdab_dataset/3j8v/imgt/3j8v_I_H.ann | sabdab_dataset/3j8v/imgt/3j8v_M_L.ann | sabdab_dataset/3j8v/sequence/3j8v_raw.pdb | sabdab_dataset/3j8v/sequence/3j8v_I_VH.fa | sabdab_dataset/3j8v/sequence/3j8v_M_VL.fa | sabdab_dataset/3j8v/structure/3j8v.pdb | sabdab_dataset/3j8v/structure/chothia/3j8v.pdb | false | false | train |
3j8w | F | J | 0 | D | protein | null | l1 | VIRUS/IMMUNE SYSTEM | 11/19/14 | Cryo-EM reconstruction of quasi-HPV16 complex with H263.A2 Fab | MUS MUSCULUS; HUMAN PAPILLOMAVIRUS TYPE 16 | mus musculus | mus musculus | human papillomavirus type 16 | Guan, J., Hafenstein, S. | 13 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV12 | Kappa | null | null | null | null | null | sabdab_dataset/3j8w/abangle/3j8w.abangle | sabdab_dataset/3j8w/annotation/3j8w_F_VH.ann | sabdab_dataset/3j8w/annotation/3j8w_J_VL.ann | sabdab_dataset/3j8w/imgt/3j8w_F_H.ann | sabdab_dataset/3j8w/imgt/3j8w_J_L.ann | sabdab_dataset/3j8w/sequence/3j8w_raw.pdb | sabdab_dataset/3j8w/sequence/3j8w_F_VH.fa | sabdab_dataset/3j8w/sequence/3j8w_J_VL.fa | sabdab_dataset/3j8w/structure/3j8w.pdb | sabdab_dataset/3j8w/structure/chothia/3j8w.pdb | false | false | train |
3j8w | G | K | 0 | C | protein | null | l1 | VIRUS/IMMUNE SYSTEM | 11/19/14 | Cryo-EM reconstruction of quasi-HPV16 complex with H263.A2 Fab | MUS MUSCULUS; HUMAN PAPILLOMAVIRUS TYPE 16 | mus musculus | mus musculus | human papillomavirus type 16 | Guan, J., Hafenstein, S. | 13 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV12 | Kappa | null | null | null | null | null | sabdab_dataset/3j8w/abangle/3j8w.abangle | sabdab_dataset/3j8w/annotation/3j8w_G_VH.ann | sabdab_dataset/3j8w/annotation/3j8w_K_VL.ann | sabdab_dataset/3j8w/imgt/3j8w_G_H.ann | sabdab_dataset/3j8w/imgt/3j8w_K_L.ann | sabdab_dataset/3j8w/sequence/3j8w_raw.pdb | sabdab_dataset/3j8w/sequence/3j8w_G_VH.fa | sabdab_dataset/3j8w/sequence/3j8w_K_VL.fa | sabdab_dataset/3j8w/structure/3j8w.pdb | sabdab_dataset/3j8w/structure/chothia/3j8w.pdb | false | false | train |
3j8w | H | L | 0 | E | protein | null | l1 | VIRUS/IMMUNE SYSTEM | 11/19/14 | Cryo-EM reconstruction of quasi-HPV16 complex with H263.A2 Fab | MUS MUSCULUS; HUMAN PAPILLOMAVIRUS TYPE 16 | mus musculus | mus musculus | human papillomavirus type 16 | Guan, J., Hafenstein, S. | 13 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV12 | Kappa | null | null | null | null | null | sabdab_dataset/3j8w/abangle/3j8w.abangle | sabdab_dataset/3j8w/annotation/3j8w_H_VH.ann | sabdab_dataset/3j8w/annotation/3j8w_L_VL.ann | sabdab_dataset/3j8w/imgt/3j8w_H_H.ann | sabdab_dataset/3j8w/imgt/3j8w_L_L.ann | sabdab_dataset/3j8w/sequence/3j8w_raw.pdb | sabdab_dataset/3j8w/sequence/3j8w_H_VH.fa | sabdab_dataset/3j8w/sequence/3j8w_L_VL.fa | sabdab_dataset/3j8w/structure/3j8w.pdb | sabdab_dataset/3j8w/structure/chothia/3j8w.pdb | false | false | train |
3j8w | I | M | 0 | B | A | protein | protein | NA | NA | l1 | l1 | VIRUS/IMMUNE SYSTEM | 11/19/14 | Cryo-EM reconstruction of quasi-HPV16 complex with H263.A2 Fab | MUS MUSCULUS; HUMAN PAPILLOMAVIRUS TYPE 16 | mus musculus | mus musculus | human papillomavirus type 16 | human papillomavirus type 16 | Guan, J., Hafenstein, S. | 13 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV12 | Kappa | null | null | null | null | null | sabdab_dataset/3j8w/abangle/3j8w.abangle | sabdab_dataset/3j8w/annotation/3j8w_I_VH.ann | sabdab_dataset/3j8w/annotation/3j8w_M_VL.ann | sabdab_dataset/3j8w/imgt/3j8w_I_H.ann | sabdab_dataset/3j8w/imgt/3j8w_M_L.ann | sabdab_dataset/3j8w/sequence/3j8w_raw.pdb | sabdab_dataset/3j8w/sequence/3j8w_I_VH.fa | sabdab_dataset/3j8w/sequence/3j8w_M_VL.fa | sabdab_dataset/3j8w/structure/3j8w.pdb | sabdab_dataset/3j8w/structure/chothia/3j8w.pdb | false | false | train |
3j8z | F | J | 0 | D | protein | null | l1 | VIRUS/IMMUNE SYSTEM | 11/20/14 | Cryo-EM reconstruction of quasi-HPV16 complex with H16.1A Fab | HUMAN PAPILLOMAVIRUS TYPE 16; MUS MUSCULUS | mus musculus | mus musculus | human papillomavirus type 16 | Guan, J., Hafenstein, S. | 14 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null | sabdab_dataset/3j8z/abangle/3j8z.abangle | sabdab_dataset/3j8z/annotation/3j8z_F_VH.ann | sabdab_dataset/3j8z/annotation/3j8z_J_VL.ann | sabdab_dataset/3j8z/imgt/3j8z_F_H.ann | sabdab_dataset/3j8z/imgt/3j8z_J_L.ann | sabdab_dataset/3j8z/sequence/3j8z_raw.pdb | sabdab_dataset/3j8z/sequence/3j8z_F_VH.fa | sabdab_dataset/3j8z/sequence/3j8z_J_VL.fa | sabdab_dataset/3j8z/structure/3j8z.pdb | sabdab_dataset/3j8z/structure/chothia/3j8z.pdb | false | false | train |
3j8z | G | K | 0 | C | protein | null | l1 | VIRUS/IMMUNE SYSTEM | 11/20/14 | Cryo-EM reconstruction of quasi-HPV16 complex with H16.1A Fab | HUMAN PAPILLOMAVIRUS TYPE 16; MUS MUSCULUS | mus musculus | mus musculus | human papillomavirus type 16 | Guan, J., Hafenstein, S. | 14 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null | sabdab_dataset/3j8z/abangle/3j8z.abangle | sabdab_dataset/3j8z/annotation/3j8z_G_VH.ann | sabdab_dataset/3j8z/annotation/3j8z_K_VL.ann | sabdab_dataset/3j8z/imgt/3j8z_G_H.ann | sabdab_dataset/3j8z/imgt/3j8z_K_L.ann | sabdab_dataset/3j8z/sequence/3j8z_raw.pdb | sabdab_dataset/3j8z/sequence/3j8z_G_VH.fa | sabdab_dataset/3j8z/sequence/3j8z_K_VL.fa | sabdab_dataset/3j8z/structure/3j8z.pdb | sabdab_dataset/3j8z/structure/chothia/3j8z.pdb | false | false | train |
3j8z | H | L | 0 | E | protein | null | l1 | VIRUS/IMMUNE SYSTEM | 11/20/14 | Cryo-EM reconstruction of quasi-HPV16 complex with H16.1A Fab | HUMAN PAPILLOMAVIRUS TYPE 16; MUS MUSCULUS | mus musculus | mus musculus | human papillomavirus type 16 | Guan, J., Hafenstein, S. | 14 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null | sabdab_dataset/3j8z/abangle/3j8z.abangle | sabdab_dataset/3j8z/annotation/3j8z_H_VH.ann | sabdab_dataset/3j8z/annotation/3j8z_L_VL.ann | sabdab_dataset/3j8z/imgt/3j8z_H_H.ann | sabdab_dataset/3j8z/imgt/3j8z_L_L.ann | sabdab_dataset/3j8z/sequence/3j8z_raw.pdb | sabdab_dataset/3j8z/sequence/3j8z_H_VH.fa | sabdab_dataset/3j8z/sequence/3j8z_L_VL.fa | sabdab_dataset/3j8z/structure/3j8z.pdb | sabdab_dataset/3j8z/structure/chothia/3j8z.pdb | false | false | train |
3j8z | I | M | 0 | B | A | protein | protein | NA | NA | l1 | l1 | VIRUS/IMMUNE SYSTEM | 11/20/14 | Cryo-EM reconstruction of quasi-HPV16 complex with H16.1A Fab | HUMAN PAPILLOMAVIRUS TYPE 16; MUS MUSCULUS | mus musculus | mus musculus | human papillomavirus type 16 | human papillomavirus type 16 | Guan, J., Hafenstein, S. | 14 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null | sabdab_dataset/3j8z/abangle/3j8z.abangle | sabdab_dataset/3j8z/annotation/3j8z_I_VH.ann | sabdab_dataset/3j8z/annotation/3j8z_M_VL.ann | sabdab_dataset/3j8z/imgt/3j8z_I_H.ann | sabdab_dataset/3j8z/imgt/3j8z_M_L.ann | sabdab_dataset/3j8z/sequence/3j8z_raw.pdb | sabdab_dataset/3j8z/sequence/3j8z_I_VH.fa | sabdab_dataset/3j8z/sequence/3j8z_M_VL.fa | sabdab_dataset/3j8z/structure/3j8z.pdb | sabdab_dataset/3j8z/structure/chothia/3j8z.pdb | false | false | train |
3j93 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 12/02/14 | Fitting of Fab into the cryoEM density map of EV71 procapsid in complex with Fab22A12 | MUS MUSCULUS | mus musculus | mus musculus | null | Shingler, K.L., Cifuente, J.O., Ashley, R.E., Makhov, A.M., Conway, J.F., Hafenstein, S. | 8.8 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV6 | Kappa | null | null | null | null | null | sabdab_dataset/3j93/abangle/3j93.abangle | sabdab_dataset/3j93/annotation/3j93_H_VH.ann | sabdab_dataset/3j93/annotation/3j93_L_VL.ann | sabdab_dataset/3j93/imgt/3j93_H_H.ann | sabdab_dataset/3j93/imgt/3j93_L_L.ann | sabdab_dataset/3j93/sequence/3j93_raw.pdb | sabdab_dataset/3j93/sequence/3j93_H_VH.fa | sabdab_dataset/3j93/sequence/3j93_L_VL.fa | sabdab_dataset/3j93/structure/3j93.pdb | sabdab_dataset/3j93/structure/chothia/3j93.pdb | false | false | train |
3jab | H | L | 0 | C | protein | null | phosphodiesterase 5/6 chimera catalytic domain | HYDROLASE/IMMUNE SYSTEM | 05/26/15 | Domain organization and conformational plasticity of the G protein effector, PDE6 | BOS TAURUS; MUS MUSCULUS | mus musculus | mus musculus | bos taurus | Zhang, Z., He, F., Constantine, R., Baker, M.L., Baehr, W., Schmid, M.F., Wensel, T.G., Agosto, M.A. | 11 | ELECTRON MICROSCOPY | null | null | false | false | IGHV14 | IGKV6 | Kappa | null | null | null | null | null | sabdab_dataset/3jab/abangle/3jab.abangle | sabdab_dataset/3jab/annotation/3jab_H_VH.ann | sabdab_dataset/3jab/annotation/3jab_L_VL.ann | sabdab_dataset/3jab/imgt/3jab_H_H.ann | sabdab_dataset/3jab/imgt/3jab_L_L.ann | sabdab_dataset/3jab/sequence/3jab_raw.pdb | sabdab_dataset/3jab/sequence/3jab_H_VH.fa | sabdab_dataset/3jab/sequence/3jab_L_VL.fa | sabdab_dataset/3jab/structure/3jab.pdb | sabdab_dataset/3jab/structure/chothia/3jab.pdb | false | false | train |
3jab | Q | R | 0 | O | protein | null | phosphodiesterase 5/6 chimera catalytic domain | HYDROLASE/IMMUNE SYSTEM | 05/26/15 | Domain organization and conformational plasticity of the G protein effector, PDE6 | BOS TAURUS; MUS MUSCULUS | mus musculus | mus musculus | bos taurus | Zhang, Z., He, F., Constantine, R., Baker, M.L., Baehr, W., Schmid, M.F., Wensel, T.G., Agosto, M.A. | 11 | ELECTRON MICROSCOPY | null | null | false | false | IGHV14 | IGKV6 | Kappa | null | null | null | null | null | sabdab_dataset/3jab/abangle/3jab.abangle | sabdab_dataset/3jab/annotation/3jab_Q_VH.ann | sabdab_dataset/3jab/annotation/3jab_R_VL.ann | sabdab_dataset/3jab/imgt/3jab_Q_H.ann | sabdab_dataset/3jab/imgt/3jab_R_L.ann | sabdab_dataset/3jab/sequence/3jab_raw.pdb | sabdab_dataset/3jab/sequence/3jab_Q_VH.fa | sabdab_dataset/3jab/sequence/3jab_R_VL.fa | sabdab_dataset/3jab/structure/3jab.pdb | sabdab_dataset/3jab/structure/chothia/3jab.pdb | false | false | validation |
3jau | H | L | 0 | A | peptide | null | capsid protein vp1 | VIRUS/IMMUNE SYSTEM | 06/24/15 | The cryoEM map of EV71 mature viron in complex with the Fab fragment of antibody D5 | HUMAN ENTEROVIRUS | human enterovirus | human enterovirus | human enterovirus | Fan, C., Ye, X.H., Ku, Z.Q., Zuo, T., Kong, L.L., Zhang, C., Shi, J.P., Liu, Q.W., Chen, T., Zhang, Y.Y., Jiang, W., Zhang, L.Q., Huang, Z., Cong, Y. | 4.8 | ELECTRON MICROSCOPY | null | null | false | false | IGHV14 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/3jau/abangle/3jau.abangle | sabdab_dataset/3jau/annotation/3jau_H_VH.ann | sabdab_dataset/3jau/annotation/3jau_L_VL.ann | sabdab_dataset/3jau/imgt/3jau_H_H.ann | sabdab_dataset/3jau/imgt/3jau_L_L.ann | sabdab_dataset/3jau/sequence/3jau_raw.pdb | sabdab_dataset/3jau/sequence/3jau_H_VH.fa | sabdab_dataset/3jau/sequence/3jau_L_VL.fa | sabdab_dataset/3jau/structure/3jau.pdb | sabdab_dataset/3jau/structure/chothia/3jau.pdb | false | false | validation |
3jba | H | L | 0 | A | protein | null | major capsid protein l1 | VIRUS/IMMUNE SYSTEM | 08/11/15 | The U4 antibody epitope on human papillomavirus 16 identified by cryo-EM | HUMAN PAPILLOMAVIRUS TYPE 16; MUS MUSCULUS | mus musculus | mus musculus | human papillomavirus type 16 | Guan, J., Bywaters, S.M., Brendle, S.A., Lee, H., Ashley, R.E., Christensen, N.D., Hafenstein, S. | 12 | ELECTRON MICROSCOPY | null | null | false | false | IGHV5 | IGKV8 | Kappa | null | null | null | null | null | sabdab_dataset/3jba/abangle/3jba.abangle | sabdab_dataset/3jba/annotation/3jba_H_VH.ann | sabdab_dataset/3jba/annotation/3jba_L_VL.ann | sabdab_dataset/3jba/imgt/3jba_H_H.ann | sabdab_dataset/3jba/imgt/3jba_L_L.ann | sabdab_dataset/3jba/sequence/3jba_raw.pdb | sabdab_dataset/3jba/sequence/3jba_H_VH.fa | sabdab_dataset/3jba/sequence/3jba_L_VL.fa | sabdab_dataset/3jba/structure/3jba.pdb | sabdab_dataset/3jba/structure/chothia/3jba.pdb | false | false | train |
3jbc | 7 | null | 0 | 3 | protein | null | capsid protein vp3 | VIRUS/IMMUNE SYSTEM | 08/26/15 | Complex of Poliovirus with VHH PVSP29F | CAMELUS DROMEDARIUS; HUMAN POLIOVIRUS 1 MAHONEY | camelus dromedarius | null | human poliovirus 1 mahoney | Strauss, M., Schotte, L., Thys, B., Filman, D.J., Hogle, J.M. | 5.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/3jbc/annotation/3jbc_7_VH.ann | null | sabdab_dataset/3jbc/imgt/3jbc_7_H.ann | null | sabdab_dataset/3jbc/sequence/3jbc_raw.pdb | sabdab_dataset/3jbc/sequence/3jbc_7_VH.fa | null | sabdab_dataset/3jbc/structure/3jbc.pdb | sabdab_dataset/3jbc/structure/chothia/3jbc.pdb | false | false | train |
3jbd | 7 | null | 0 | 3 | protein | null | capsid protein vp3 | VIRUS/IMMUNE SYSTEM | 08/26/15 | Complex of poliovirus with VHH PVSP6A | CAMELUS DROMEDARIUS; HUMAN POLIOVIRUS 1 MAHONEY | camelus dromedarius | null | human poliovirus 1 mahoney | Strauss, M., Schotte, L., Thys, B., Filman, D.J., Hogle, J.M. | 4.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/3jbd/annotation/3jbd_7_VH.ann | null | sabdab_dataset/3jbd/imgt/3jbd_7_H.ann | null | sabdab_dataset/3jbd/sequence/3jbd_raw.pdb | sabdab_dataset/3jbd/sequence/3jbd_7_VH.fa | null | sabdab_dataset/3jbd/structure/3jbd.pdb | sabdab_dataset/3jbd/structure/chothia/3jbd.pdb | false | false | train |
3jbe | 7 | null | 0 | 3 | protein | null | capsid protein vp3 | VIRUS/IMMUNE SYSTEM | 08/26/15 | Complex of poliovirus with VHH PVSS8A | CAMELUS DROMEDARIUS; HUMAN POLIOVIRUS 1 MAHONEY | camelus dromedarius | null | human poliovirus 1 mahoney | Strauss, M., Schotte, L., Thys, B., Filman, D.J., Hogle, J.M. | 4.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/3jbe/annotation/3jbe_7_VH.ann | null | sabdab_dataset/3jbe/imgt/3jbe_7_H.ann | null | sabdab_dataset/3jbe/sequence/3jbe_raw.pdb | sabdab_dataset/3jbe/sequence/3jbe_7_VH.fa | null | sabdab_dataset/3jbe/structure/3jbe.pdb | sabdab_dataset/3jbe/structure/chothia/3jbe.pdb | false | false | train |
3jbf | 7 | null | 0 | 3 | protein | null | capsid protein vp3 | VIRUS/IMMUNE SYSTEM | 08/26/15 | Complex of poliovirus with VHH PVSP19B | CAMELUS DROMEDARIUS; HUMAN POLIOVIRUS 1 MAHONEY | camelus dromedarius | null | human poliovirus 1 mahoney | Strauss, M., Schotte, L., Thys, B., Filman, D.J., Hogle, J.M. | 4.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/3jbf/annotation/3jbf_7_VH.ann | null | sabdab_dataset/3jbf/imgt/3jbf_7_H.ann | null | sabdab_dataset/3jbf/sequence/3jbf_raw.pdb | sabdab_dataset/3jbf/sequence/3jbf_7_VH.fa | null | sabdab_dataset/3jbf/structure/3jbf.pdb | sabdab_dataset/3jbf/structure/chothia/3jbf.pdb | false | false | train |
3jbg | 7 | null | 0 | null | null | null | null | VIRUS/IMMUNE SYSTEM | 08/26/15 | Complex of poliovirus with VHH PVSS21E | CAMELUS DROMEDARIUS; HUMAN POLIOVIRUS 1 MAHONEY | camelus dromedarius | null | null | Strauss, M., Schotte, L., Thys, B., Filman, D.J., Hogle, J.M. | 3.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/3jbg/annotation/3jbg_7_VH.ann | null | sabdab_dataset/3jbg/imgt/3jbg_7_H.ann | null | sabdab_dataset/3jbg/sequence/3jbg_raw.pdb | sabdab_dataset/3jbg/sequence/3jbg_7_VH.fa | null | sabdab_dataset/3jbg/structure/3jbg.pdb | sabdab_dataset/3jbg/structure/chothia/3jbg.pdb | false | false | validation |
3jbq | H | L | 0 | F | protein | null | phosphodiesterase 5/6 chimera catalytic domain | HYDROLASE/IMMUNE SYSTEM | 09/17/15 | Domain Organization and Conformational Plasticity of the G Protein Effector, PDE6 | MUS MUSCULUS; BOS TAURUS | mus musculus | mus musculus | bos taurus | Zhang, Z., He, F., Constantine, R., Baker, M.L., Baehr, W., Schmid, M.F., Wensel, T.G., Agosto, M.A. | 11 | ELECTRON MICROSCOPY | null | null | false | false | IGHV14 | IGKV6 | Kappa | null | null | null | null | null | sabdab_dataset/3jbq/abangle/3jbq.abangle | sabdab_dataset/3jbq/annotation/3jbq_H_VH.ann | sabdab_dataset/3jbq/annotation/3jbq_L_VL.ann | sabdab_dataset/3jbq/imgt/3jbq_H_H.ann | sabdab_dataset/3jbq/imgt/3jbq_L_L.ann | sabdab_dataset/3jbq/sequence/3jbq_raw.pdb | sabdab_dataset/3jbq/sequence/3jbq_H_VH.fa | sabdab_dataset/3jbq/sequence/3jbq_L_VL.fa | sabdab_dataset/3jbq/structure/3jbq.pdb | sabdab_dataset/3jbq/structure/chothia/3jbq.pdb | false | false | train |
3jbq | h | l | 0 | B | protein | null | phosphodiesterase 5/6 chimera catalytic domain | HYDROLASE/IMMUNE SYSTEM | 09/17/15 | Domain Organization and Conformational Plasticity of the G Protein Effector, PDE6 | MUS MUSCULUS; BOS TAURUS | mus musculus | mus musculus | bos taurus | Zhang, Z., He, F., Constantine, R., Baker, M.L., Baehr, W., Schmid, M.F., Wensel, T.G., Agosto, M.A. | 11 | ELECTRON MICROSCOPY | null | null | false | false | IGHV14 | IGKV6 | Kappa | null | null | null | null | null | sabdab_dataset/3jbq/abangle/3jbq.abangle | sabdab_dataset/3jbq/annotation/3jbq_H_VH.ann | sabdab_dataset/3jbq/annotation/3jbq_L_VL.ann | sabdab_dataset/3jbq/imgt/3jbq_H_H.ann | sabdab_dataset/3jbq/imgt/3jbq_L_L.ann | sabdab_dataset/3jbq/sequence/3jbq_raw.pdb | sabdab_dataset/3jbq/sequence/3jbq_H_VH.fa | sabdab_dataset/3jbq/sequence/3jbq_L_VL.fa | sabdab_dataset/3jbq/structure/3jbq.pdb | sabdab_dataset/3jbq/structure/chothia/3jbq.pdb | false | false | test |
3jcb | C | B | 0 | A | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 11/25/15 | Structure of Simian Immunodeficiency Virus Envelope Spikes bound with CD4 and Monoclonal Antibody 36D5 | HOMO SAPIENS; SIMIAN IMMUNODEFICIENCY VIRUS | homo sapiens | homo sapiens | simian immunodeficiency virus | Hu, G., Liu, J., Roux, K., Taylor, K.A. | NOT | ELECTRON MICROSCOPY | null | null | false | false | IGHV4 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/3jcb/abangle/3jcb.abangle | sabdab_dataset/3jcb/annotation/3jcb_C_VH.ann | sabdab_dataset/3jcb/annotation/3jcb_B_VL.ann | sabdab_dataset/3jcb/imgt/3jcb_C_H.ann | sabdab_dataset/3jcb/imgt/3jcb_B_L.ann | sabdab_dataset/3jcb/sequence/3jcb_raw.pdb | sabdab_dataset/3jcb/sequence/3jcb_C_VH.fa | sabdab_dataset/3jcb/sequence/3jcb_B_VL.fa | sabdab_dataset/3jcb/structure/3jcb.pdb | sabdab_dataset/3jcb/structure/chothia/3jcb.pdb | false | false | train |
3jcc | C | B | 0 | A | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 11/25/15 | Structure of Simian Immunodeficiency Virus Envelope Spikes bound with CD4 and Monoclonal Antibody 36D5 | HOMO SAPIENS; SIMIAN IMMUNODEFICIENCY VIRUS | homo sapiens | homo sapiens | simian immunodeficiency virus | Hu, G., Liu, J., Roux, K., Taylor, K.A. | NOT | ELECTRON MICROSCOPY | null | null | false | false | IGHV4 | IGLV3 | Lambda | null | null | null | null | null | sabdab_dataset/3jcc/abangle/3jcc.abangle | sabdab_dataset/3jcc/annotation/3jcc_C_VH.ann | sabdab_dataset/3jcc/annotation/3jcc_B_VL.ann | sabdab_dataset/3jcc/imgt/3jcc_C_H.ann | sabdab_dataset/3jcc/imgt/3jcc_B_L.ann | sabdab_dataset/3jcc/sequence/3jcc_raw.pdb | sabdab_dataset/3jcc/sequence/3jcc_C_VH.fa | sabdab_dataset/3jcc/sequence/3jcc_B_VL.fa | sabdab_dataset/3jcc/structure/3jcc.pdb | sabdab_dataset/3jcc/structure/chothia/3jcc.pdb | false | false | validation |
3jcx | H | L | 0 | A | protein | null | capsid protein 2 | VIRUS/IMMUNE SYSTEM | 03/21/16 | Canine Parvovirus complexed with Fab E | CANINE PARVOVIRUS; RATTUS NORVEGICUS | rattus norvegicus | rattus norvegicus | canine parvovirus | Organtini, L.J., Iketani, S., Huang, K., Ashley, R.E., Makhov, A.M., Conway, J.F., Parrish, C.R., Hafenstein, S. | 4.1 | ELECTRON MICROSCOPY | null | null | false | false | IGHV2 | IGKV6 | Kappa | null | null | null | null | null | sabdab_dataset/3jcx/abangle/3jcx.abangle | sabdab_dataset/3jcx/annotation/3jcx_H_VH.ann | sabdab_dataset/3jcx/annotation/3jcx_L_VL.ann | sabdab_dataset/3jcx/imgt/3jcx_H_H.ann | sabdab_dataset/3jcx/imgt/3jcx_L_L.ann | sabdab_dataset/3jcx/sequence/3jcx_raw.pdb | sabdab_dataset/3jcx/sequence/3jcx_H_VH.fa | sabdab_dataset/3jcx/sequence/3jcx_L_VL.fa | sabdab_dataset/3jcx/structure/3jcx.pdb | sabdab_dataset/3jcx/structure/chothia/3jcx.pdb | false | false | validation |
3juy | A | a | 0 | null | null | null | null | IMMUNE SYSTEM | 09/15/09 | Crystal Structure of a 3B3 Variant, a Broadly Neutralizing HIV-1 scFv Antibody | HOMO SAPIENS | homo sapiens | null | null | Clark, K.R., Walsh, S.T. | 2.5 | X-RAY DIFFRACTION | 0.260 | 0.195 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/3juy/abangle/3juy.abangle | sabdab_dataset/3juy/annotation/3juy_A_VH.ann | sabdab_dataset/3juy/annotation/3juy_A_VL.ann | sabdab_dataset/3juy/imgt/3juy_A_H.ann | sabdab_dataset/3juy/imgt/3juy_A_L.ann | sabdab_dataset/3juy/sequence/3juy_raw.pdb | sabdab_dataset/3juy/sequence/3juy_A_VH.fa | sabdab_dataset/3juy/sequence/3juy_A_VL.fa | sabdab_dataset/3juy/structure/3juy.pdb | sabdab_dataset/3juy/structure/chothia/3juy.pdb | true | false | train |
3juy | B | b | 0 | null | null | null | null | IMMUNE SYSTEM | 09/15/09 | Crystal Structure of a 3B3 Variant, a Broadly Neutralizing HIV-1 scFv Antibody | HOMO SAPIENS | homo sapiens | null | null | Clark, K.R., Walsh, S.T. | 2.5 | X-RAY DIFFRACTION | 0.260 | 0.195 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/3juy/abangle/3juy.abangle | sabdab_dataset/3juy/annotation/3juy_B_VH.ann | sabdab_dataset/3juy/annotation/3juy_B_VL.ann | sabdab_dataset/3juy/imgt/3juy_B_H.ann | sabdab_dataset/3juy/imgt/3juy_B_L.ann | sabdab_dataset/3juy/sequence/3juy_raw.pdb | sabdab_dataset/3juy/sequence/3juy_B_VH.fa | sabdab_dataset/3juy/sequence/3juy_B_VL.fa | sabdab_dataset/3juy/structure/3juy.pdb | sabdab_dataset/3juy/structure/chothia/3juy.pdb | true | false | train |
3juy | C | c | 0 | null | null | null | null | IMMUNE SYSTEM | 09/15/09 | Crystal Structure of a 3B3 Variant, a Broadly Neutralizing HIV-1 scFv Antibody | HOMO SAPIENS | homo sapiens | null | null | Clark, K.R., Walsh, S.T. | 2.5 | X-RAY DIFFRACTION | 0.260 | 0.195 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/3juy/abangle/3juy.abangle | sabdab_dataset/3juy/annotation/3juy_C_VH.ann | sabdab_dataset/3juy/annotation/3juy_C_VL.ann | sabdab_dataset/3juy/imgt/3juy_C_H.ann | sabdab_dataset/3juy/imgt/3juy_C_L.ann | sabdab_dataset/3juy/sequence/3juy_raw.pdb | sabdab_dataset/3juy/sequence/3juy_C_VH.fa | sabdab_dataset/3juy/sequence/3juy_C_VL.fa | sabdab_dataset/3juy/structure/3juy.pdb | sabdab_dataset/3juy/structure/chothia/3juy.pdb | true | false | validation |
3juy | D | d | 0 | null | null | null | null | IMMUNE SYSTEM | 09/15/09 | Crystal Structure of a 3B3 Variant, a Broadly Neutralizing HIV-1 scFv Antibody | HOMO SAPIENS | homo sapiens | null | null | Clark, K.R., Walsh, S.T. | 2.5 | X-RAY DIFFRACTION | 0.260 | 0.195 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/3juy/abangle/3juy.abangle | sabdab_dataset/3juy/annotation/3juy_D_VH.ann | sabdab_dataset/3juy/annotation/3juy_D_VL.ann | sabdab_dataset/3juy/imgt/3juy_D_H.ann | sabdab_dataset/3juy/imgt/3juy_D_L.ann | sabdab_dataset/3juy/sequence/3juy_raw.pdb | sabdab_dataset/3juy/sequence/3juy_D_VH.fa | sabdab_dataset/3juy/sequence/3juy_D_VL.fa | sabdab_dataset/3juy/structure/3juy.pdb | sabdab_dataset/3juy/structure/chothia/3juy.pdb | true | false | train |
3juy | E | e | 0 | null | null | null | null | IMMUNE SYSTEM | 09/15/09 | Crystal Structure of a 3B3 Variant, a Broadly Neutralizing HIV-1 scFv Antibody | HOMO SAPIENS | homo sapiens | null | null | Clark, K.R., Walsh, S.T. | 2.5 | X-RAY DIFFRACTION | 0.260 | 0.195 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/3juy/abangle/3juy.abangle | sabdab_dataset/3juy/annotation/3juy_E_VH.ann | sabdab_dataset/3juy/annotation/3juy_E_VL.ann | sabdab_dataset/3juy/imgt/3juy_E_H.ann | sabdab_dataset/3juy/imgt/3juy_E_L.ann | sabdab_dataset/3juy/sequence/3juy_raw.pdb | sabdab_dataset/3juy/sequence/3juy_E_VH.fa | sabdab_dataset/3juy/sequence/3juy_E_VL.fa | sabdab_dataset/3juy/structure/3juy.pdb | sabdab_dataset/3juy/structure/chothia/3juy.pdb | true | false | train |
3juy | F | f | 0 | null | null | null | null | IMMUNE SYSTEM | 09/15/09 | Crystal Structure of a 3B3 Variant, a Broadly Neutralizing HIV-1 scFv Antibody | HOMO SAPIENS | homo sapiens | null | null | Clark, K.R., Walsh, S.T. | 2.5 | X-RAY DIFFRACTION | 0.260 | 0.195 | true | true | unknown | unknown | unknown | null | null | null | null | null | sabdab_dataset/3juy/abangle/3juy.abangle | sabdab_dataset/3juy/annotation/3juy_F_VH.ann | sabdab_dataset/3juy/annotation/3juy_F_VL.ann | sabdab_dataset/3juy/imgt/3juy_F_H.ann | sabdab_dataset/3juy/imgt/3juy_F_L.ann | sabdab_dataset/3juy/sequence/3juy_raw.pdb | sabdab_dataset/3juy/sequence/3juy_F_VH.fa | sabdab_dataset/3juy/sequence/3juy_F_VL.fa | sabdab_dataset/3juy/structure/3juy.pdb | sabdab_dataset/3juy/structure/chothia/3juy.pdb | true | false | validation |
3jwd | H | L | 0 | A | protein | null | hiv-1 gp120 envelope glycoprotein | VIRAL PROTEIN | 09/18/09 | Structure of HIV-1 gp120 with gp41-Interactive Region: Layered Architecture and Basis of Conformational Mobility | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Pancera, M., Majeed, S., Ban, Y.A., Chen, L., Huang, C.C., Kong, L., Kwon, Y.D., Stuckey, J., Zhou, T., Robinson, J.E., Schief, W.R., Sodroski, J., Wyatt, R., Kwong, P.D. | 2.61 | X-RAY DIFFRACTION | 0.275 | 0.201 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/3jwd/abangle/3jwd.abangle | sabdab_dataset/3jwd/annotation/3jwd_H_VH.ann | sabdab_dataset/3jwd/annotation/3jwd_L_VL.ann | sabdab_dataset/3jwd/imgt/3jwd_H_H.ann | sabdab_dataset/3jwd/imgt/3jwd_L_L.ann | sabdab_dataset/3jwd/sequence/3jwd_raw.pdb | sabdab_dataset/3jwd/sequence/3jwd_H_VH.fa | sabdab_dataset/3jwd/sequence/3jwd_L_VL.fa | sabdab_dataset/3jwd/structure/3jwd.pdb | sabdab_dataset/3jwd/structure/chothia/3jwd.pdb | false | false | train |
3jwd | P | O | 0 | B | protein | null | hiv-1 gp120 envelope glycoprotein | VIRAL PROTEIN | 09/18/09 | Structure of HIV-1 gp120 with gp41-Interactive Region: Layered Architecture and Basis of Conformational Mobility | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Pancera, M., Majeed, S., Ban, Y.A., Chen, L., Huang, C.C., Kong, L., Kwon, Y.D., Stuckey, J., Zhou, T., Robinson, J.E., Schief, W.R., Sodroski, J., Wyatt, R., Kwong, P.D. | 2.61 | X-RAY DIFFRACTION | 0.275 | 0.201 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/3jwd/abangle/3jwd.abangle | sabdab_dataset/3jwd/annotation/3jwd_P_VH.ann | sabdab_dataset/3jwd/annotation/3jwd_O_VL.ann | sabdab_dataset/3jwd/imgt/3jwd_P_H.ann | sabdab_dataset/3jwd/imgt/3jwd_O_L.ann | sabdab_dataset/3jwd/sequence/3jwd_raw.pdb | sabdab_dataset/3jwd/sequence/3jwd_P_VH.fa | sabdab_dataset/3jwd/sequence/3jwd_O_VL.fa | sabdab_dataset/3jwd/structure/3jwd.pdb | sabdab_dataset/3jwd/structure/chothia/3jwd.pdb | false | false | train |
3jwo | H | L | 0 | A | protein | null | hiv-1 gp120 envelope glycoprotein | VIRAL PROTEIN | 09/18/09 | Structure of HIV-1 gp120 with gp41-Interactive Region: Layered Architecture and Basis of Conformational Mobility | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Pancera, M., Majeed, S., Huang, C.C., Kwon, Y.D., Zhou, T., Robinson, J.E., Sodroski, J., Wyatt, R., Kwong, P.D. | 3.51 | X-RAY DIFFRACTION | 0.273 | 0.257 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null | sabdab_dataset/3jwo/abangle/3jwo.abangle | sabdab_dataset/3jwo/annotation/3jwo_H_VH.ann | sabdab_dataset/3jwo/annotation/3jwo_L_VL.ann | sabdab_dataset/3jwo/imgt/3jwo_H_H.ann | sabdab_dataset/3jwo/imgt/3jwo_L_L.ann | sabdab_dataset/3jwo/sequence/3jwo_raw.pdb | sabdab_dataset/3jwo/sequence/3jwo_H_VH.fa | sabdab_dataset/3jwo/sequence/3jwo_L_VL.fa | sabdab_dataset/3jwo/structure/3jwo.pdb | sabdab_dataset/3jwo/structure/chothia/3jwo.pdb | true | false | validation |
3k1k | C | null | 0 | A | protein | null | green fluorescent protein | LUMINESCENT PROTEIN/IMMUNE SYSTEM | 09/28/09 | Green fluorescent protein bound to minimizer nanobody | AEQUOREA VICTORIA; CAMELUS DROMEDARIUS | lama pacos | null | aequorea victoria | Kirchhofer, A., Helma, J., Schmidthals, K., Frauer, C., Cui, S., Karcher, A., Pellis, M., Muyldermans, S., Delucci, C.C., Cardoso, M.C., Leonhardt, H., Hopfner, K.-P., Rothbauer, U. | 2.15 | X-RAY DIFFRACTION | 0.255 | 0.212 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/3k1k/annotation/3k1k_C_VH.ann | null | sabdab_dataset/3k1k/imgt/3k1k_C_H.ann | null | sabdab_dataset/3k1k/sequence/3k1k_raw.pdb | sabdab_dataset/3k1k/sequence/3k1k_C_VH.fa | null | sabdab_dataset/3k1k/structure/3k1k.pdb | sabdab_dataset/3k1k/structure/chothia/3k1k.pdb | false | false | test |
3k1k | D | null | 0 | B | protein | null | green fluorescent protein | LUMINESCENT PROTEIN/IMMUNE SYSTEM | 09/28/09 | Green fluorescent protein bound to minimizer nanobody | AEQUOREA VICTORIA; CAMELUS DROMEDARIUS | lama pacos | null | aequorea victoria | Kirchhofer, A., Helma, J., Schmidthals, K., Frauer, C., Cui, S., Karcher, A., Pellis, M., Muyldermans, S., Delucci, C.C., Cardoso, M.C., Leonhardt, H., Hopfner, K.-P., Rothbauer, U. | 2.15 | X-RAY DIFFRACTION | 0.255 | 0.212 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/3k1k/annotation/3k1k_D_VH.ann | null | sabdab_dataset/3k1k/imgt/3k1k_D_H.ann | null | sabdab_dataset/3k1k/sequence/3k1k_raw.pdb | sabdab_dataset/3k1k/sequence/3k1k_D_VH.fa | null | sabdab_dataset/3k1k/structure/3k1k.pdb | sabdab_dataset/3k1k/structure/chothia/3k1k.pdb | false | false | validation |
3k2u | H | L | 0 | A | protein | null | hepatocyte growth factor activator long chain | HYDROLASE/IMMUNE SYSTEM | 09/30/09 | Crystal structure of HGFA in complex with the allosteric inhibitory antibody Fab40 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Ganesan, R., Eigenbrot, C., Shia, S. | 2.35 | X-RAY DIFFRACTION | 0.290 | 0.239 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -13.36 | SPR | 25 | 20004165 | sabdab_dataset/3k2u/abangle/3k2u.abangle | sabdab_dataset/3k2u/annotation/3k2u_H_VH.ann | sabdab_dataset/3k2u/annotation/3k2u_L_VL.ann | sabdab_dataset/3k2u/imgt/3k2u_H_H.ann | sabdab_dataset/3k2u/imgt/3k2u_L_L.ann | sabdab_dataset/3k2u/sequence/3k2u_raw.pdb | sabdab_dataset/3k2u/sequence/3k2u_H_VH.fa | sabdab_dataset/3k2u/sequence/3k2u_L_VL.fa | sabdab_dataset/3k2u/structure/3k2u.pdb | sabdab_dataset/3k2u/structure/chothia/3k2u.pdb | false | false | train |
3k3q | A | null | 0 | C | B | protein | protein | NA | NA | botulinum neurotoxin type a | botulinum neurotoxin type a | IMMUNE SYSTEM | 10/04/09 | Crystal Structure of a Llama Antibody complexed with the C. Botulinum Neurotoxin Serotype A Catalytic Domain | LAMA GLAMA; CLOSTRIDIUM BOTULINUM A STR. HALL | lama glama | null | clostridium botulinum a str. hall | clostridium botulinum a str. hall | Thompson, A.A., Dong, J., Marks, J.D., Stevens, R.C. | 2.6 | X-RAY DIFFRACTION | 0.256 | 0.218 | false | true | unknown | unknown | unknown | null | null | null | null | null | null | sabdab_dataset/3k3q/annotation/3k3q_A_VH.ann | null | null | null | sabdab_dataset/3k3q/sequence/3k3q_raw.pdb | sabdab_dataset/3k3q/sequence/3k3q_A_VH.fa | null | sabdab_dataset/3k3q/structure/3k3q.pdb | sabdab_dataset/3k3q/structure/chothia/3k3q.pdb | true | true | validation |
3k74 | B | null | 0 | A | protein | null | dihydrofolate reductase | OXIDOREDUCTASE | 10/12/09 | Disruption of protein dynamics by an allosteric effector antibody | ESCHERICHIA COLI K-12; LAMA GLAMA | lama glama | null | escherichia coli k-12 | Oyen, D., Srinivasan, V., Steyaert, J., Barlow, J. | 1.95 | X-RAY DIFFRACTION | 0.240 | 0.196 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/3k74/annotation/3k74_B_VH.ann | null | sabdab_dataset/3k74/imgt/3k74_B_H.ann | null | sabdab_dataset/3k74/sequence/3k74_raw.pdb | sabdab_dataset/3k74/sequence/3k74_B_VH.fa | null | sabdab_dataset/3k74/structure/3k74.pdb | sabdab_dataset/3k74/structure/chothia/3k74.pdb | true | true | train |
3k7u | A | null | 0 | C | protein | null | mp18 rna editing complex protein | Immune System, RNA Binding Protein | 10/13/09 | Structure of essential protein from Trypanosoma brucei | LAMA GLAMA; TRYPANOSOMA BRUCEI | lama glama | null | trypanosoma brucei | Wu, M. | 2.1 | X-RAY DIFFRACTION | 0.265 | 0.202 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/3k7u/annotation/3k7u_A_VH.ann | null | sabdab_dataset/3k7u/imgt/3k7u_A_H.ann | null | sabdab_dataset/3k7u/sequence/3k7u_raw.pdb | sabdab_dataset/3k7u/sequence/3k7u_A_VH.fa | null | sabdab_dataset/3k7u/structure/3k7u.pdb | sabdab_dataset/3k7u/structure/chothia/3k7u.pdb | true | true | train |
3k80 | A | null | 0 | C | protein | null | mp18 rna editing complex protein | Immune System, RNA Binding Protein | 10/13/09 | Structure of essential protein from Trypanosoma brucei | LAMA GLAMA; TRYPANOSOMA BRUCEI | lama glama | null | trypanosoma brucei | Wu, M. | 2.4 | X-RAY DIFFRACTION | 0.277 | 0.223 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/3k80/annotation/3k80_A_VH.ann | null | sabdab_dataset/3k80/imgt/3k80_A_H.ann | null | sabdab_dataset/3k80/sequence/3k80_raw.pdb | sabdab_dataset/3k80/sequence/3k80_A_VH.fa | null | sabdab_dataset/3k80/structure/3k80.pdb | sabdab_dataset/3k80/structure/chothia/3k80.pdb | true | true | train |
3k80 | B | null | 0 | D | protein | null | mp18 rna editing complex protein | Immune System, RNA Binding Protein | 10/13/09 | Structure of essential protein from Trypanosoma brucei | LAMA GLAMA; TRYPANOSOMA BRUCEI | lama glama | null | trypanosoma brucei | Wu, M. | 2.4 | X-RAY DIFFRACTION | 0.277 | 0.223 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/3k80/annotation/3k80_B_VH.ann | null | sabdab_dataset/3k80/imgt/3k80_B_H.ann | null | sabdab_dataset/3k80/sequence/3k80_raw.pdb | sabdab_dataset/3k80/sequence/3k80_B_VH.fa | null | sabdab_dataset/3k80/structure/3k80.pdb | sabdab_dataset/3k80/structure/chothia/3k80.pdb | true | false | train |
3k81 | A | null | 0 | D | protein | null | mp18 rna editing complex protein | Immune System, RNA Binding Protein | 10/13/09 | Structure of the central interaction protein from the Trypanosoma brucei editosome in complex with single domain antibodies | TRYPANOSOMA BRUCEI; LAMA GLAMA | lama glama | null | trypanosoma brucei | Park, Y.-J., Hol, W. | 3.4 | X-RAY DIFFRACTION | 0.320 | 0.267 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/3k81/annotation/3k81_A_VH.ann | null | sabdab_dataset/3k81/imgt/3k81_A_H.ann | null | sabdab_dataset/3k81/sequence/3k81_raw.pdb | sabdab_dataset/3k81/sequence/3k81_A_VH.fa | null | sabdab_dataset/3k81/structure/3k81.pdb | sabdab_dataset/3k81/structure/chothia/3k81.pdb | true | true | validation |
3k81 | B | null | 0 | C | protein | null | mp18 rna editing complex protein | Immune System, RNA Binding Protein | 10/13/09 | Structure of the central interaction protein from the Trypanosoma brucei editosome in complex with single domain antibodies | TRYPANOSOMA BRUCEI; LAMA GLAMA | lama glama | null | trypanosoma brucei | Park, Y.-J., Hol, W. | 3.4 | X-RAY DIFFRACTION | 0.320 | 0.267 | false | true | IGHV1 | null | null | null | null | null | null | null | null | sabdab_dataset/3k81/annotation/3k81_B_VH.ann | null | sabdab_dataset/3k81/imgt/3k81_B_H.ann | null | sabdab_dataset/3k81/sequence/3k81_raw.pdb | sabdab_dataset/3k81/sequence/3k81_B_VH.fa | null | sabdab_dataset/3k81/structure/3k81.pdb | sabdab_dataset/3k81/structure/chothia/3k81.pdb | true | false | train |
3kdm | B | A | 0 | B | Hapten | TES | TESTOSTERONE | IMMUNE SYSTEM | 10/23/09 | Crystal Structure of Human Anti-steroid Fab 5F2 in Complex with Testosterone | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Niemi, M.H., Rouvinen, J. | 1.5 | X-RAY DIFFRACTION | 0.208 | 0.180 | true | true | IGHV3 | IGKV1 | Kappa | 0 | -9.54 | Other | 25 | 21360611 | sabdab_dataset/3kdm/abangle/3kdm.abangle | sabdab_dataset/3kdm/annotation/3kdm_B_VH.ann | sabdab_dataset/3kdm/annotation/3kdm_A_VL.ann | sabdab_dataset/3kdm/imgt/3kdm_B_H.ann | sabdab_dataset/3kdm/imgt/3kdm_A_L.ann | sabdab_dataset/3kdm/sequence/3kdm_raw.pdb | sabdab_dataset/3kdm/sequence/3kdm_B_VH.fa | sabdab_dataset/3kdm/sequence/3kdm_A_VL.fa | sabdab_dataset/3kdm/structure/3kdm.pdb | sabdab_dataset/3kdm/structure/chothia/3kdm.pdb | true | false | test |
3kdm | H | L | 0 | H | Hapten | TES | TESTOSTERONE | IMMUNE SYSTEM | 10/23/09 | Crystal Structure of Human Anti-steroid Fab 5F2 in Complex with Testosterone | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Niemi, M.H., Rouvinen, J. | 1.5 | X-RAY DIFFRACTION | 0.208 | 0.180 | true | true | IGHV3 | IGKV1 | Kappa | 0 | -9.54 | Other | 25 | 21360611 | sabdab_dataset/3kdm/abangle/3kdm.abangle | sabdab_dataset/3kdm/annotation/3kdm_H_VH.ann | sabdab_dataset/3kdm/annotation/3kdm_L_VL.ann | sabdab_dataset/3kdm/imgt/3kdm_H_H.ann | sabdab_dataset/3kdm/imgt/3kdm_L_L.ann | sabdab_dataset/3kdm/sequence/3kdm_raw.pdb | sabdab_dataset/3kdm/sequence/3kdm_H_VH.fa | sabdab_dataset/3kdm/sequence/3kdm_L_VL.fa | sabdab_dataset/3kdm/structure/3kdm.pdb | sabdab_dataset/3kdm/structure/chothia/3kdm.pdb | true | false | validation |
3kj4 | C | B | 0 | D | protein | null | reticulon-4 receptor | IMMUNE SYSTEM | 11/02/09 | Structure of rat Nogo receptor bound to 1D9 antagonist antibody | RATTUS NORVEGICUS; MUS MUSCULUS | mus musculus | mus musculus | rattus norvegicus | Silvian, L.F. | 3.1 | X-RAY DIFFRACTION | 0.318 | 0.253 | false | true | IGHV2 | IGKV8 | Kappa | null | null | null | null | null | sabdab_dataset/3kj4/abangle/3kj4.abangle | sabdab_dataset/3kj4/annotation/3kj4_C_VH.ann | sabdab_dataset/3kj4/annotation/3kj4_B_VL.ann | sabdab_dataset/3kj4/imgt/3kj4_C_H.ann | sabdab_dataset/3kj4/imgt/3kj4_B_L.ann | sabdab_dataset/3kj4/sequence/3kj4_raw.pdb | sabdab_dataset/3kj4/sequence/3kj4_C_VH.fa | sabdab_dataset/3kj4/sequence/3kj4_B_VL.fa | sabdab_dataset/3kj4/structure/3kj4.pdb | sabdab_dataset/3kj4/structure/chothia/3kj4.pdb | true | false | train |
3kj4 | H | L | 0 | A | protein | null | reticulon-4 receptor | IMMUNE SYSTEM | 11/02/09 | Structure of rat Nogo receptor bound to 1D9 antagonist antibody | RATTUS NORVEGICUS; MUS MUSCULUS | mus musculus | mus musculus | rattus norvegicus | Silvian, L.F. | 3.1 | X-RAY DIFFRACTION | 0.318 | 0.253 | false | true | IGHV2 | IGKV8 | Kappa | null | null | null | null | null | sabdab_dataset/3kj4/abangle/3kj4.abangle | sabdab_dataset/3kj4/annotation/3kj4_H_VH.ann | sabdab_dataset/3kj4/annotation/3kj4_L_VL.ann | sabdab_dataset/3kj4/imgt/3kj4_H_H.ann | sabdab_dataset/3kj4/imgt/3kj4_L_L.ann | sabdab_dataset/3kj4/sequence/3kj4_raw.pdb | sabdab_dataset/3kj4/sequence/3kj4_H_VH.fa | sabdab_dataset/3kj4/sequence/3kj4_L_VL.fa | sabdab_dataset/3kj4/structure/3kj4.pdb | sabdab_dataset/3kj4/structure/chothia/3kj4.pdb | true | false | test |
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