pdb
stringlengths
4
4
Hchain
stringclasses
59 values
Lchain
stringclasses
60 values
model
int64
0
76
antigen_chain
stringclasses
386 values
antigen_type
stringclasses
24 values
antigen_het_name
stringclasses
240 values
antigen_name
stringlengths
1
396
short_header
stringclasses
448 values
date
stringlengths
8
8
compound
stringlengths
4
243
organism
stringlengths
3
175
heavy_species
stringclasses
121 values
light_species
stringclasses
67 values
antigen_species
stringclasses
937 values
authors
stringlengths
6
762
resolution
stringlengths
1
8
method
stringclasses
10 values
r_free
stringclasses
365 values
r_factor
stringclasses
358 values
scfv
bool
2 classes
engineered
bool
2 classes
heavy_subclass
stringclasses
14 values
light_subclass
stringclasses
35 values
light_ctype
stringclasses
3 values
affinity
float64
0
0
delta_g
float64
-16.91
-5.04
affinity_method
stringclasses
11 values
temperature
float64
4
37
pmid
stringclasses
157 values
abangle
stringlengths
40
40
annotation_H
stringlengths
44
44
annotation_L
stringlengths
44
44
imgt_H
stringlengths
37
37
imgt_L
stringlengths
37
37
sequence_raw
stringlengths
41
41
sequence_H
stringlengths
41
41
sequence_L
stringlengths
41
41
structure
stringlengths
38
38
structure_chothia
stringlengths
46
46
in_nr_set
bool
2 classes
curated_quality_dataset
bool
2 classes
split
stringclasses
3 values
3mod
H
L
0
P
peptide
null
gp41 mper-derived peptide
IMMUNE SYSTEM
04/22/10
Crystal structure of the neutralizing HIV antibody 2F5 Fab fragment (recombinantly produced IgG) with 11 aa gp41 MPER-derived peptide
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
null
homo sapiens
Nicely, N.I., Dennison, S.M., Kelsoe, G., Liao, H.-X., Alam, S.M., Haynes, B.F.
2.2
X-RAY DIFFRACTION
0.214
0.184
false
true
IGHV2
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3mod/abangle/3mod.abangle
sabdab_dataset/3mod/annotation/3mod_H_VH.ann
sabdab_dataset/3mod/annotation/3mod_L_VL.ann
sabdab_dataset/3mod/imgt/3mod_H_H.ann
sabdab_dataset/3mod/imgt/3mod_L_L.ann
sabdab_dataset/3mod/sequence/3mod_raw.pdb
sabdab_dataset/3mod/sequence/3mod_H_VH.fa
sabdab_dataset/3mod/sequence/3mod_L_VL.fa
sabdab_dataset/3mod/structure/3mod.pdb
sabdab_dataset/3mod/structure/chothia/3mod.pdb
false
false
validation
3moq
A
null
0
null
null
null
null
NEUROPEPTIDE, IMMUNE SYSTEM
02/16/11
Amyloid beta(18-41) peptide fusion with new antigen receptor variable domain from sharks
Homo sapiens; Orectolobus maculatus
orectolobus maculatus, homo sapiens
null
null
Streltsov, V.A.
2.054
X-RAY DIFFRACTION
0.249
0.190
false
true
unknown
unknown
unknown
null
null
null
null
null
null
sabdab_dataset/3moq/annotation/3moq_A_VH.ann
null
null
null
sabdab_dataset/3moq/sequence/3moq_raw.pdb
sabdab_dataset/3moq/sequence/3moq_A_VH.fa
null
sabdab_dataset/3moq/structure/3moq.pdb
sabdab_dataset/3moq/structure/chothia/3moq.pdb
true
false
train
3moq
B
null
0
null
null
null
null
NEUROPEPTIDE, IMMUNE SYSTEM
02/16/11
Amyloid beta(18-41) peptide fusion with new antigen receptor variable domain from sharks
Homo sapiens; Orectolobus maculatus
orectolobus maculatus, homo sapiens
null
null
Streltsov, V.A.
2.054
X-RAY DIFFRACTION
0.249
0.190
false
true
unknown
unknown
unknown
null
null
null
null
null
null
sabdab_dataset/3moq/annotation/3moq_B_VH.ann
null
null
null
sabdab_dataset/3moq/sequence/3moq_raw.pdb
sabdab_dataset/3moq/sequence/3moq_B_VH.fa
null
sabdab_dataset/3moq/structure/3moq.pdb
sabdab_dataset/3moq/structure/chothia/3moq.pdb
true
false
train
3moq
C
null
0
null
null
null
null
NEUROPEPTIDE, IMMUNE SYSTEM
02/16/11
Amyloid beta(18-41) peptide fusion with new antigen receptor variable domain from sharks
Homo sapiens; Orectolobus maculatus
orectolobus maculatus, homo sapiens
null
null
Streltsov, V.A.
2.054
X-RAY DIFFRACTION
0.249
0.190
false
true
unknown
unknown
unknown
null
null
null
null
null
null
sabdab_dataset/3moq/annotation/3moq_C_VH.ann
null
null
null
sabdab_dataset/3moq/sequence/3moq_raw.pdb
sabdab_dataset/3moq/sequence/3moq_C_VH.fa
null
sabdab_dataset/3moq/structure/3moq.pdb
sabdab_dataset/3moq/structure/chothia/3moq.pdb
true
false
test
3moq
D
null
0
null
null
null
null
NEUROPEPTIDE, IMMUNE SYSTEM
02/16/11
Amyloid beta(18-41) peptide fusion with new antigen receptor variable domain from sharks
Homo sapiens; Orectolobus maculatus
orectolobus maculatus, homo sapiens
null
null
Streltsov, V.A.
2.054
X-RAY DIFFRACTION
0.249
0.190
false
true
unknown
unknown
unknown
null
null
null
null
null
null
sabdab_dataset/3moq/annotation/3moq_D_VH.ann
null
null
null
sabdab_dataset/3moq/sequence/3moq_raw.pdb
sabdab_dataset/3moq/sequence/3moq_D_VH.fa
null
sabdab_dataset/3moq/structure/3moq.pdb
sabdab_dataset/3moq/structure/chothia/3moq.pdb
true
false
validation
3mug
B
A
0
null
null
null
null
IMMUNE SYSTEM
05/03/10
Crystal structure of human Fab PG16, a broadly reactive and potent HIV-1 neutralizing antibody
HOMO SAPIENS
homo sapiens
homo sapiens
null
Pejchal, R., Walker, L.M., Burton, D.R., Wilson, I.A.
2.49
X-RAY DIFFRACTION
0.248
0.207
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/3mug/abangle/3mug.abangle
sabdab_dataset/3mug/annotation/3mug_B_VH.ann
sabdab_dataset/3mug/annotation/3mug_A_VL.ann
sabdab_dataset/3mug/imgt/3mug_B_H.ann
sabdab_dataset/3mug/imgt/3mug_A_L.ann
sabdab_dataset/3mug/sequence/3mug_raw.pdb
sabdab_dataset/3mug/sequence/3mug_B_VH.fa
sabdab_dataset/3mug/sequence/3mug_A_VL.fa
sabdab_dataset/3mug/structure/3mug.pdb
sabdab_dataset/3mug/structure/chothia/3mug.pdb
false
false
train
3mug
D
C
0
C
carbohydrate
NAG
polysaccharide
IMMUNE SYSTEM
05/03/10
Crystal structure of human Fab PG16, a broadly reactive and potent HIV-1 neutralizing antibody
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Pejchal, R., Walker, L.M., Burton, D.R., Wilson, I.A.
2.49
X-RAY DIFFRACTION
0.248
0.207
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/3mug/abangle/3mug.abangle
sabdab_dataset/3mug/annotation/3mug_D_VH.ann
sabdab_dataset/3mug/annotation/3mug_C_VL.ann
sabdab_dataset/3mug/imgt/3mug_D_H.ann
sabdab_dataset/3mug/imgt/3mug_C_L.ann
sabdab_dataset/3mug/sequence/3mug_raw.pdb
sabdab_dataset/3mug/sequence/3mug_D_VH.fa
sabdab_dataset/3mug/sequence/3mug_C_VL.fa
sabdab_dataset/3mug/structure/3mug.pdb
sabdab_dataset/3mug/structure/chothia/3mug.pdb
false
false
train
3mug
F
E
0
C
carbohydrate
NAG
polysaccharide
IMMUNE SYSTEM
05/03/10
Crystal structure of human Fab PG16, a broadly reactive and potent HIV-1 neutralizing antibody
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Pejchal, R., Walker, L.M., Burton, D.R., Wilson, I.A.
2.49
X-RAY DIFFRACTION
0.248
0.207
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/3mug/abangle/3mug.abangle
sabdab_dataset/3mug/annotation/3mug_F_VH.ann
sabdab_dataset/3mug/annotation/3mug_E_VL.ann
sabdab_dataset/3mug/imgt/3mug_F_H.ann
sabdab_dataset/3mug/imgt/3mug_E_L.ann
sabdab_dataset/3mug/sequence/3mug_raw.pdb
sabdab_dataset/3mug/sequence/3mug_F_VH.fa
sabdab_dataset/3mug/sequence/3mug_E_VL.fa
sabdab_dataset/3mug/structure/3mug.pdb
sabdab_dataset/3mug/structure/chothia/3mug.pdb
false
false
validation
3mug
H
G
0
null
null
null
null
IMMUNE SYSTEM
05/03/10
Crystal structure of human Fab PG16, a broadly reactive and potent HIV-1 neutralizing antibody
HOMO SAPIENS
homo sapiens
homo sapiens
null
Pejchal, R., Walker, L.M., Burton, D.R., Wilson, I.A.
2.49
X-RAY DIFFRACTION
0.248
0.207
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/3mug/abangle/3mug.abangle
sabdab_dataset/3mug/annotation/3mug_H_VH.ann
sabdab_dataset/3mug/annotation/3mug_G_VL.ann
sabdab_dataset/3mug/imgt/3mug_H_H.ann
sabdab_dataset/3mug/imgt/3mug_G_L.ann
sabdab_dataset/3mug/sequence/3mug_raw.pdb
sabdab_dataset/3mug/sequence/3mug_H_VH.fa
sabdab_dataset/3mug/sequence/3mug_G_VL.fa
sabdab_dataset/3mug/structure/3mug.pdb
sabdab_dataset/3mug/structure/chothia/3mug.pdb
false
false
train
3mug
J
I
0
I
carbohydrate
NAG
polysaccharide
IMMUNE SYSTEM
05/03/10
Crystal structure of human Fab PG16, a broadly reactive and potent HIV-1 neutralizing antibody
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Pejchal, R., Walker, L.M., Burton, D.R., Wilson, I.A.
2.49
X-RAY DIFFRACTION
0.248
0.207
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/3mug/abangle/3mug.abangle
sabdab_dataset/3mug/annotation/3mug_J_VH.ann
sabdab_dataset/3mug/annotation/3mug_I_VL.ann
sabdab_dataset/3mug/imgt/3mug_J_H.ann
sabdab_dataset/3mug/imgt/3mug_I_L.ann
sabdab_dataset/3mug/sequence/3mug_raw.pdb
sabdab_dataset/3mug/sequence/3mug_J_VH.fa
sabdab_dataset/3mug/sequence/3mug_I_VL.fa
sabdab_dataset/3mug/structure/3mug.pdb
sabdab_dataset/3mug/structure/chothia/3mug.pdb
false
false
test
3mug
L
K
0
I
carbohydrate
NAG
polysaccharide
IMMUNE SYSTEM
05/03/10
Crystal structure of human Fab PG16, a broadly reactive and potent HIV-1 neutralizing antibody
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Pejchal, R., Walker, L.M., Burton, D.R., Wilson, I.A.
2.49
X-RAY DIFFRACTION
0.248
0.207
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
sabdab_dataset/3mug/abangle/3mug.abangle
sabdab_dataset/3mug/annotation/3mug_L_VH.ann
sabdab_dataset/3mug/annotation/3mug_K_VL.ann
sabdab_dataset/3mug/imgt/3mug_L_H.ann
sabdab_dataset/3mug/imgt/3mug_K_L.ann
sabdab_dataset/3mug/sequence/3mug_raw.pdb
sabdab_dataset/3mug/sequence/3mug_L_VH.fa
sabdab_dataset/3mug/sequence/3mug_K_VL.fa
sabdab_dataset/3mug/structure/3mug.pdb
sabdab_dataset/3mug/structure/chothia/3mug.pdb
false
false
train
3muh
null
L
0
L
carbohydrate
NAG
polysaccharide
IMMUNE SYSTEM
05/03/10
Crystal structure of PG9 light chain
HOMO SAPIENS
null
homo sapiens
homo sapiens
Pejchal, R., Walker, L.M., Burton, D.R., Wilson, I.A.
3.0
X-RAY DIFFRACTION
0.277
0.245
false
true
null
IGLV2
Lambda
null
null
null
null
null
null
null
sabdab_dataset/3muh/annotation/3muh_L_VL.ann
null
sabdab_dataset/3muh/imgt/3muh_L_L.ann
sabdab_dataset/3muh/sequence/3muh_raw.pdb
null
sabdab_dataset/3muh/sequence/3muh_L_VL.fa
sabdab_dataset/3muh/structure/3muh.pdb
sabdab_dataset/3muh/structure/chothia/3muh.pdb
false
false
test
3mxv
H
L
0
null
null
null
null
IMMUNE SYSTEM
05/07/10
Crystal structure of fab fragment of anti-Shh 5E1 chimera
MUS MUSCULUS, HOMO SAPIENS
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Hymowitz, S.G., Maun, H.R.
1.9
X-RAY DIFFRACTION
0.224
0.179
false
true
IGHV1
IGKV6
Kappa
null
null
null
null
null
sabdab_dataset/3mxv/abangle/3mxv.abangle
sabdab_dataset/3mxv/annotation/3mxv_H_VH.ann
sabdab_dataset/3mxv/annotation/3mxv_L_VL.ann
sabdab_dataset/3mxv/imgt/3mxv_H_H.ann
sabdab_dataset/3mxv/imgt/3mxv_L_L.ann
sabdab_dataset/3mxv/sequence/3mxv_raw.pdb
sabdab_dataset/3mxv/sequence/3mxv_H_VH.fa
sabdab_dataset/3mxv/sequence/3mxv_L_VL.fa
sabdab_dataset/3mxv/structure/3mxv.pdb
sabdab_dataset/3mxv/structure/chothia/3mxv.pdb
false
false
train
3mxw
H
L
0
A
protein
null
sonic hedgehog protein
SIGNALING PROTEIN
05/07/10
Crystal structure Sonic hedgehog bound to the 5E1 fab fragment
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Hymowitz, S.G., Maun, H.R.
1.83
X-RAY DIFFRACTION
0.218
0.176
false
true
IGHV1
IGKV6
Kappa
0
-12.7
ITC
30
20504762
sabdab_dataset/3mxw/abangle/3mxw.abangle
sabdab_dataset/3mxw/annotation/3mxw_H_VH.ann
sabdab_dataset/3mxw/annotation/3mxw_L_VL.ann
sabdab_dataset/3mxw/imgt/3mxw_H_H.ann
sabdab_dataset/3mxw/imgt/3mxw_L_L.ann
sabdab_dataset/3mxw/sequence/3mxw_raw.pdb
sabdab_dataset/3mxw/sequence/3mxw_H_VH.fa
sabdab_dataset/3mxw/sequence/3mxw_L_VL.fa
sabdab_dataset/3mxw/structure/3mxw.pdb
sabdab_dataset/3mxw/structure/chothia/3mxw.pdb
false
false
train
3n85
H
L
0
A
protein
null
receptor tyrosine-protein kinase erbb-2
Transferase/immune system
05/27/10
Crystallographic trimer of HER2 extracellular regions in complex with tryptophan-rich antibody fragment
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Eigenbrot, C.
3.2
X-RAY DIFFRACTION
0.230
0.206
false
true
IGHV3
IGKV1
Kappa
0
-12.41
SPR
null
20654626
sabdab_dataset/3n85/abangle/3n85.abangle
sabdab_dataset/3n85/annotation/3n85_H_VH.ann
sabdab_dataset/3n85/annotation/3n85_L_VL.ann
sabdab_dataset/3n85/imgt/3n85_H_H.ann
sabdab_dataset/3n85/imgt/3n85_L_L.ann
sabdab_dataset/3n85/sequence/3n85_raw.pdb
sabdab_dataset/3n85/sequence/3n85_H_VH.fa
sabdab_dataset/3n85/sequence/3n85_L_VL.fa
sabdab_dataset/3n85/structure/3n85.pdb
sabdab_dataset/3n85/structure/chothia/3n85.pdb
false
false
train
3n9g
H
L
0
null
null
null
null
IMMUNE SYSTEM
05/29/10
Crystal structure of the Fab fragment of the human neutralizing anti-West Nile Virus MAb CR4354
HOMO SAPIENS
homo sapiens
homo sapiens
null
Kaufmann, B., Rossmann, M.G.
1.434
X-RAY DIFFRACTION
0.186
0.167
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/3n9g/abangle/3n9g.abangle
sabdab_dataset/3n9g/annotation/3n9g_H_VH.ann
sabdab_dataset/3n9g/annotation/3n9g_L_VL.ann
sabdab_dataset/3n9g/imgt/3n9g_H_H.ann
sabdab_dataset/3n9g/imgt/3n9g_L_L.ann
sabdab_dataset/3n9g/sequence/3n9g_raw.pdb
sabdab_dataset/3n9g/sequence/3n9g_H_VH.fa
sabdab_dataset/3n9g/sequence/3n9g_L_VL.fa
sabdab_dataset/3n9g/structure/3n9g.pdb
sabdab_dataset/3n9g/structure/chothia/3n9g.pdb
true
false
test
3na9
H
L
0
null
null
null
null
IMMUNE SYSTEM
06/01/10
Crystal structure of Fab15
HOMO SAPIENS
homo sapiens
homo sapiens
null
Luo, J.
1.7
X-RAY DIFFRACTION
0.197
0.168
false
true
IGHV5
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3na9/abangle/3na9.abangle
sabdab_dataset/3na9/annotation/3na9_H_VH.ann
sabdab_dataset/3na9/annotation/3na9_L_VL.ann
sabdab_dataset/3na9/imgt/3na9_H_H.ann
sabdab_dataset/3na9/imgt/3na9_L_L.ann
sabdab_dataset/3na9/sequence/3na9_raw.pdb
sabdab_dataset/3na9/sequence/3na9_H_VH.fa
sabdab_dataset/3na9/sequence/3na9_L_VL.fa
sabdab_dataset/3na9/structure/3na9.pdb
sabdab_dataset/3na9/structure/chothia/3na9.pdb
false
false
train
3naa
H
L
0
null
null
null
null
IMMUNE SYSTEM
06/01/10
Crystal structure of Fab15 Mut5
HOMO SAPIENS
homo sapiens
homo sapiens
null
Luo, J., Feng, Y., Gilliland, G.L.
1.7
X-RAY DIFFRACTION
0.200
0.178
false
true
IGHV5
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3naa/abangle/3naa.abangle
sabdab_dataset/3naa/annotation/3naa_H_VH.ann
sabdab_dataset/3naa/annotation/3naa_L_VL.ann
sabdab_dataset/3naa/imgt/3naa_H_H.ann
sabdab_dataset/3naa/imgt/3naa_L_L.ann
sabdab_dataset/3naa/sequence/3naa_raw.pdb
sabdab_dataset/3naa/sequence/3naa_H_VH.fa
sabdab_dataset/3naa/sequence/3naa_L_VL.fa
sabdab_dataset/3naa/structure/3naa.pdb
sabdab_dataset/3naa/structure/chothia/3naa.pdb
false
false
train
3nab
H
L
0
null
null
null
null
IMMUNE SYSTEM
06/01/10
Crystal Structure of fab15 Mut6
HOMO SAPIENS
homo sapiens
homo sapiens
null
Luo, J.
2.32
X-RAY DIFFRACTION
0.259
0.203
false
true
IGHV5
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3nab/abangle/3nab.abangle
sabdab_dataset/3nab/annotation/3nab_H_VH.ann
sabdab_dataset/3nab/annotation/3nab_L_VL.ann
sabdab_dataset/3nab/imgt/3nab_H_H.ann
sabdab_dataset/3nab/imgt/3nab_L_L.ann
sabdab_dataset/3nab/sequence/3nab_raw.pdb
sabdab_dataset/3nab/sequence/3nab_H_VH.fa
sabdab_dataset/3nab/sequence/3nab_L_VL.fa
sabdab_dataset/3nab/structure/3nab.pdb
sabdab_dataset/3nab/structure/chothia/3nab.pdb
false
false
test
3nac
H
L
0
null
null
null
null
IMMUNE SYSTEM
06/01/10
Crystal structure of Fab15 Mut7
HOMO SAPIENS
homo sapiens
homo sapiens
null
Luo, J.
1.8
X-RAY DIFFRACTION
0.212
0.184
false
true
IGHV5
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3nac/abangle/3nac.abangle
sabdab_dataset/3nac/annotation/3nac_H_VH.ann
sabdab_dataset/3nac/annotation/3nac_L_VL.ann
sabdab_dataset/3nac/imgt/3nac_H_H.ann
sabdab_dataset/3nac/imgt/3nac_L_L.ann
sabdab_dataset/3nac/sequence/3nac_raw.pdb
sabdab_dataset/3nac/sequence/3nac_H_VH.fa
sabdab_dataset/3nac/sequence/3nac_L_VL.fa
sabdab_dataset/3nac/structure/3nac.pdb
sabdab_dataset/3nac/structure/chothia/3nac.pdb
false
false
train
3ncj
H
L
0
null
null
null
null
IMMUNE SYSTEM
06/04/10
Crystal structure of Fab15 Mut8
HOMO SAPIENS
homo sapiens
homo sapiens
null
Luo, J., Feng, Y., Gilliland, G.L.
1.6
X-RAY DIFFRACTION
0.225
0.200
false
true
IGHV5
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3ncj/abangle/3ncj.abangle
sabdab_dataset/3ncj/annotation/3ncj_H_VH.ann
sabdab_dataset/3ncj/annotation/3ncj_L_VL.ann
sabdab_dataset/3ncj/imgt/3ncj_H_H.ann
sabdab_dataset/3ncj/imgt/3ncj_L_L.ann
sabdab_dataset/3ncj/sequence/3ncj_raw.pdb
sabdab_dataset/3ncj/sequence/3ncj_H_VH.fa
sabdab_dataset/3ncj/sequence/3ncj_L_VL.fa
sabdab_dataset/3ncj/structure/3ncj.pdb
sabdab_dataset/3ncj/structure/chothia/3ncj.pdb
false
false
train
3ncy
P
S
0
B | A
protein | protein
NA | NA
adic | adic
TRANSPORT PROTEIN
06/06/10
X-ray crystal structure of an arginine agmatine antiporter (AdiC) in complex with a Fab fragment
SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM; MUS MUSCULUS
mus musculus
mus musculus
salmonella enterica subsp. enterica serovartyphimurium | salmonella enterica subsp. enterica serovartyphimurium
Fang, Y., Jayaram, H., Shane, T., Komalkova-Partensky, L., Wu, F., Williams, C., Xiong, Y., Miller, C.
3.2
X-RAY DIFFRACTION
0.312
0.282
false
true
IGHV1
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/3ncy/abangle/3ncy.abangle
sabdab_dataset/3ncy/annotation/3ncy_P_VH.ann
sabdab_dataset/3ncy/annotation/3ncy_S_VL.ann
sabdab_dataset/3ncy/imgt/3ncy_P_H.ann
sabdab_dataset/3ncy/imgt/3ncy_S_L.ann
sabdab_dataset/3ncy/sequence/3ncy_raw.pdb
sabdab_dataset/3ncy/sequence/3ncy_P_VH.fa
sabdab_dataset/3ncy/sequence/3ncy_S_VL.fa
sabdab_dataset/3ncy/structure/3ncy.pdb
sabdab_dataset/3ncy/structure/chothia/3ncy.pdb
true
false
train
3ncy
Q
W
0
C | D
protein | protein
NA | NA
adic | adic
TRANSPORT PROTEIN
06/06/10
X-ray crystal structure of an arginine agmatine antiporter (AdiC) in complex with a Fab fragment
SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM; MUS MUSCULUS
mus musculus
mus musculus
salmonella enterica subsp. enterica serovartyphimurium | salmonella enterica subsp. enterica serovartyphimurium
Fang, Y., Jayaram, H., Shane, T., Komalkova-Partensky, L., Wu, F., Williams, C., Xiong, Y., Miller, C.
3.2
X-RAY DIFFRACTION
0.312
0.282
false
true
IGHV1
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/3ncy/abangle/3ncy.abangle
sabdab_dataset/3ncy/annotation/3ncy_Q_VH.ann
sabdab_dataset/3ncy/annotation/3ncy_W_VL.ann
sabdab_dataset/3ncy/imgt/3ncy_Q_H.ann
sabdab_dataset/3ncy/imgt/3ncy_W_L.ann
sabdab_dataset/3ncy/sequence/3ncy_raw.pdb
sabdab_dataset/3ncy/sequence/3ncy_Q_VH.fa
sabdab_dataset/3ncy/sequence/3ncy_W_VL.fa
sabdab_dataset/3ncy/structure/3ncy.pdb
sabdab_dataset/3ncy/structure/chothia/3ncy.pdb
true
false
train
3nfp
A
B
0
K
protein
null
interleukin-2 receptor subunit alpha
Immune system/Cytokine
06/10/10
Crystal structure of the Fab fragment of therapeutic antibody daclizumab in complex with IL-2Ra (CD25) ectodomain
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Yang, H., Wang, J., Du, J., Zhong, C., Guo, Y., Ding, J.
2.86
X-RAY DIFFRACTION
0.301
0.253
false
true
IGHV1
IGKV1
Kappa
0
-13.05
SPR
25
20820193
sabdab_dataset/3nfp/abangle/3nfp.abangle
sabdab_dataset/3nfp/annotation/3nfp_A_VH.ann
sabdab_dataset/3nfp/annotation/3nfp_B_VL.ann
sabdab_dataset/3nfp/imgt/3nfp_A_H.ann
sabdab_dataset/3nfp/imgt/3nfp_B_L.ann
sabdab_dataset/3nfp/sequence/3nfp_raw.pdb
sabdab_dataset/3nfp/sequence/3nfp_A_VH.fa
sabdab_dataset/3nfp/sequence/3nfp_B_VL.fa
sabdab_dataset/3nfp/structure/3nfp.pdb
sabdab_dataset/3nfp/structure/chothia/3nfp.pdb
true
false
train
3nfp
H
L
0
I
protein
null
interleukin-2 receptor subunit alpha
Immune system/Cytokine
06/10/10
Crystal structure of the Fab fragment of therapeutic antibody daclizumab in complex with IL-2Ra (CD25) ectodomain
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Yang, H., Wang, J., Du, J., Zhong, C., Guo, Y., Ding, J.
2.86
X-RAY DIFFRACTION
0.301
0.253
false
true
IGHV1
IGKV1
Kappa
0
-13.05
SPR
25
20820193
sabdab_dataset/3nfp/abangle/3nfp.abangle
sabdab_dataset/3nfp/annotation/3nfp_H_VH.ann
sabdab_dataset/3nfp/annotation/3nfp_L_VL.ann
sabdab_dataset/3nfp/imgt/3nfp_H_H.ann
sabdab_dataset/3nfp/imgt/3nfp_L_L.ann
sabdab_dataset/3nfp/sequence/3nfp_raw.pdb
sabdab_dataset/3nfp/sequence/3nfp_H_VH.fa
sabdab_dataset/3nfp/sequence/3nfp_L_VL.fa
sabdab_dataset/3nfp/structure/3nfp.pdb
sabdab_dataset/3nfp/structure/chothia/3nfp.pdb
true
false
test
3nfs
H
L
0
null
null
null
null
IMMUNE SYSTEM
06/10/10
Crystal structure the Fab fragment of therapeutic antibody daclizumab
HOMO SAPIENS
homo sapiens
homo sapiens
null
Yang, H., Wang, J., Du, J., Zhong, C., Guo, Y., Ding, J.
2.6
X-RAY DIFFRACTION
0.275
0.225
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3nfs/abangle/3nfs.abangle
sabdab_dataset/3nfs/annotation/3nfs_H_VH.ann
sabdab_dataset/3nfs/annotation/3nfs_L_VL.ann
sabdab_dataset/3nfs/imgt/3nfs_H_H.ann
sabdab_dataset/3nfs/imgt/3nfs_L_L.ann
sabdab_dataset/3nfs/sequence/3nfs_raw.pdb
sabdab_dataset/3nfs/sequence/3nfs_H_VH.fa
sabdab_dataset/3nfs/sequence/3nfs_L_VL.fa
sabdab_dataset/3nfs/structure/3nfs.pdb
sabdab_dataset/3nfs/structure/chothia/3nfs.pdb
false
false
train
3ngb
B
C
0
A
protein
null
envelope glycoprotein gp160
VIRAL PROTEIN/IMMUNE SYSTEM
06/11/10
Crystal structure of broadly and potently neutralizing antibody VRC01 in complex with HIV-1 gp120
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Zhou, T., Kwong, P.D.
2.68
X-RAY DIFFRACTION
0.256
0.197
false
true
IGHV1
IGKV3
Kappa
0
-10.88
SPR
20
20616231
sabdab_dataset/3ngb/abangle/3ngb.abangle
sabdab_dataset/3ngb/annotation/3ngb_B_VH.ann
sabdab_dataset/3ngb/annotation/3ngb_C_VL.ann
sabdab_dataset/3ngb/imgt/3ngb_B_H.ann
sabdab_dataset/3ngb/imgt/3ngb_C_L.ann
sabdab_dataset/3ngb/sequence/3ngb_raw.pdb
sabdab_dataset/3ngb/sequence/3ngb_B_VH.fa
sabdab_dataset/3ngb/sequence/3ngb_C_VL.fa
sabdab_dataset/3ngb/structure/3ngb.pdb
sabdab_dataset/3ngb/structure/chothia/3ngb.pdb
false
false
test
3ngb
E
F
0
D
protein
null
envelope glycoprotein gp160
VIRAL PROTEIN/IMMUNE SYSTEM
06/11/10
Crystal structure of broadly and potently neutralizing antibody VRC01 in complex with HIV-1 gp120
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Zhou, T., Kwong, P.D.
2.68
X-RAY DIFFRACTION
0.256
0.197
false
true
IGHV1
IGKV3
Kappa
0
-10.88
SPR
20
20616231
sabdab_dataset/3ngb/abangle/3ngb.abangle
sabdab_dataset/3ngb/annotation/3ngb_E_VH.ann
sabdab_dataset/3ngb/annotation/3ngb_F_VL.ann
sabdab_dataset/3ngb/imgt/3ngb_E_H.ann
sabdab_dataset/3ngb/imgt/3ngb_F_L.ann
sabdab_dataset/3ngb/sequence/3ngb_raw.pdb
sabdab_dataset/3ngb/sequence/3ngb_E_VH.fa
sabdab_dataset/3ngb/sequence/3ngb_F_VL.fa
sabdab_dataset/3ngb/structure/3ngb.pdb
sabdab_dataset/3ngb/structure/chothia/3ngb.pdb
false
false
train
3ngb
H
L
0
G
protein
null
envelope glycoprotein gp160
VIRAL PROTEIN/IMMUNE SYSTEM
06/11/10
Crystal structure of broadly and potently neutralizing antibody VRC01 in complex with HIV-1 gp120
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Zhou, T., Kwong, P.D.
2.68
X-RAY DIFFRACTION
0.256
0.197
false
true
IGHV1
IGKV3
Kappa
0
-10.88
SPR
20
20616231
sabdab_dataset/3ngb/abangle/3ngb.abangle
sabdab_dataset/3ngb/annotation/3ngb_H_VH.ann
sabdab_dataset/3ngb/annotation/3ngb_L_VL.ann
sabdab_dataset/3ngb/imgt/3ngb_H_H.ann
sabdab_dataset/3ngb/imgt/3ngb_L_L.ann
sabdab_dataset/3ngb/sequence/3ngb_raw.pdb
sabdab_dataset/3ngb/sequence/3ngb_H_VH.fa
sabdab_dataset/3ngb/sequence/3ngb_L_VL.fa
sabdab_dataset/3ngb/structure/3ngb.pdb
sabdab_dataset/3ngb/structure/chothia/3ngb.pdb
false
false
validation
3ngb
J
K
0
I
protein
null
envelope glycoprotein gp160
VIRAL PROTEIN/IMMUNE SYSTEM
06/11/10
Crystal structure of broadly and potently neutralizing antibody VRC01 in complex with HIV-1 gp120
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Zhou, T., Kwong, P.D.
2.68
X-RAY DIFFRACTION
0.256
0.197
false
true
IGHV1
IGKV3
Kappa
0
-10.88
SPR
20
20616231
sabdab_dataset/3ngb/abangle/3ngb.abangle
sabdab_dataset/3ngb/annotation/3ngb_J_VH.ann
sabdab_dataset/3ngb/annotation/3ngb_K_VL.ann
sabdab_dataset/3ngb/imgt/3ngb_J_H.ann
sabdab_dataset/3ngb/imgt/3ngb_K_L.ann
sabdab_dataset/3ngb/sequence/3ngb_raw.pdb
sabdab_dataset/3ngb/sequence/3ngb_J_VH.fa
sabdab_dataset/3ngb/sequence/3ngb_K_VL.fa
sabdab_dataset/3ngb/structure/3ngb.pdb
sabdab_dataset/3ngb/structure/chothia/3ngb.pdb
false
false
train
3nh7
H
L
0
A
protein
null
bone morphogenetic protein receptor type-1a
IMMUNE SYSTEM
06/14/10
Crystal structure of the neutralizing Fab fragment AbD1556 bound to the BMP type I receptor IA
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Mueller, T.D., Harth, S., Sebald, W.
2.7
X-RAY DIFFRACTION
0.280
0.234
false
true
IGHV3
IGLV3
Lambda
0
-10.5
SPR
25
20927405
sabdab_dataset/3nh7/abangle/3nh7.abangle
sabdab_dataset/3nh7/annotation/3nh7_H_VH.ann
sabdab_dataset/3nh7/annotation/3nh7_L_VL.ann
sabdab_dataset/3nh7/imgt/3nh7_H_H.ann
sabdab_dataset/3nh7/imgt/3nh7_L_L.ann
sabdab_dataset/3nh7/sequence/3nh7_raw.pdb
sabdab_dataset/3nh7/sequence/3nh7_H_VH.fa
sabdab_dataset/3nh7/sequence/3nh7_L_VL.fa
sabdab_dataset/3nh7/structure/3nh7.pdb
sabdab_dataset/3nh7/structure/chothia/3nh7.pdb
true
false
train
3nh7
I
M
0
B
protein
null
bone morphogenetic protein receptor type-1a
IMMUNE SYSTEM
06/14/10
Crystal structure of the neutralizing Fab fragment AbD1556 bound to the BMP type I receptor IA
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Mueller, T.D., Harth, S., Sebald, W.
2.7
X-RAY DIFFRACTION
0.280
0.234
false
true
IGHV3
IGLV3
Lambda
0
-10.5
SPR
25
20927405
sabdab_dataset/3nh7/abangle/3nh7.abangle
sabdab_dataset/3nh7/annotation/3nh7_I_VH.ann
sabdab_dataset/3nh7/annotation/3nh7_M_VL.ann
sabdab_dataset/3nh7/imgt/3nh7_I_H.ann
sabdab_dataset/3nh7/imgt/3nh7_M_L.ann
sabdab_dataset/3nh7/sequence/3nh7_raw.pdb
sabdab_dataset/3nh7/sequence/3nh7_I_VH.fa
sabdab_dataset/3nh7/sequence/3nh7_M_VL.fa
sabdab_dataset/3nh7/structure/3nh7.pdb
sabdab_dataset/3nh7/structure/chothia/3nh7.pdb
true
false
train
3nh7
J
N
0
C
protein
null
bone morphogenetic protein receptor type-1a
IMMUNE SYSTEM
06/14/10
Crystal structure of the neutralizing Fab fragment AbD1556 bound to the BMP type I receptor IA
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Mueller, T.D., Harth, S., Sebald, W.
2.7
X-RAY DIFFRACTION
0.280
0.234
false
true
IGHV3
IGLV3
Lambda
0
-10.5
SPR
25
20927405
sabdab_dataset/3nh7/abangle/3nh7.abangle
sabdab_dataset/3nh7/annotation/3nh7_J_VH.ann
sabdab_dataset/3nh7/annotation/3nh7_N_VL.ann
sabdab_dataset/3nh7/imgt/3nh7_J_H.ann
sabdab_dataset/3nh7/imgt/3nh7_N_L.ann
sabdab_dataset/3nh7/sequence/3nh7_raw.pdb
sabdab_dataset/3nh7/sequence/3nh7_J_VH.fa
sabdab_dataset/3nh7/sequence/3nh7_N_VL.fa
sabdab_dataset/3nh7/structure/3nh7.pdb
sabdab_dataset/3nh7/structure/chothia/3nh7.pdb
true
false
train
3nh7
K
O
0
D
protein
null
bone morphogenetic protein receptor type-1a
IMMUNE SYSTEM
06/14/10
Crystal structure of the neutralizing Fab fragment AbD1556 bound to the BMP type I receptor IA
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Mueller, T.D., Harth, S., Sebald, W.
2.7
X-RAY DIFFRACTION
0.280
0.234
false
true
IGHV3
IGLV3
Lambda
0
-10.5
SPR
25
20927405
sabdab_dataset/3nh7/abangle/3nh7.abangle
sabdab_dataset/3nh7/annotation/3nh7_K_VH.ann
sabdab_dataset/3nh7/annotation/3nh7_O_VL.ann
sabdab_dataset/3nh7/imgt/3nh7_K_H.ann
sabdab_dataset/3nh7/imgt/3nh7_O_L.ann
sabdab_dataset/3nh7/sequence/3nh7_raw.pdb
sabdab_dataset/3nh7/sequence/3nh7_K_VH.fa
sabdab_dataset/3nh7/sequence/3nh7_O_VL.fa
sabdab_dataset/3nh7/structure/3nh7.pdb
sabdab_dataset/3nh7/structure/chothia/3nh7.pdb
true
false
train
3nid
E
F
0
C
protein
null
integrin alpha-iib
CELL ADHESION/BLOOD CLOTTING
06/15/10
The Closed Headpiece of Integrin alphaIIB beta3 and its Complex with an alpahIIB beta3 -Specific Antagonist That Does Not Induce Opening
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Zhu, J.H., Zhu, J.Q., Springer, T.A.
2.3
X-RAY DIFFRACTION
0.215
0.179
false
true
IGHV14
IGKV14
Kappa
null
null
null
null
null
sabdab_dataset/3nid/abangle/3nid.abangle
sabdab_dataset/3nid/annotation/3nid_E_VH.ann
sabdab_dataset/3nid/annotation/3nid_F_VL.ann
sabdab_dataset/3nid/imgt/3nid_E_H.ann
sabdab_dataset/3nid/imgt/3nid_F_L.ann
sabdab_dataset/3nid/sequence/3nid_raw.pdb
sabdab_dataset/3nid/sequence/3nid_E_VH.fa
sabdab_dataset/3nid/sequence/3nid_F_VL.fa
sabdab_dataset/3nid/structure/3nid.pdb
sabdab_dataset/3nid/structure/chothia/3nid.pdb
false
false
test
3nid
H
L
0
A | D
protein | protein
NA | NA
integrin alpha-iib | integrin beta-3
CELL ADHESION/BLOOD CLOTTING
06/15/10
The Closed Headpiece of Integrin alphaIIB beta3 and its Complex with an alpahIIB beta3 -Specific Antagonist That Does Not Induce Opening
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens | homo sapiens
Zhu, J.H., Zhu, J.Q., Springer, T.A.
2.3
X-RAY DIFFRACTION
0.215
0.179
false
true
IGHV14
IGKV14
Kappa
null
null
null
null
null
sabdab_dataset/3nid/abangle/3nid.abangle
sabdab_dataset/3nid/annotation/3nid_H_VH.ann
sabdab_dataset/3nid/annotation/3nid_L_VL.ann
sabdab_dataset/3nid/imgt/3nid_H_H.ann
sabdab_dataset/3nid/imgt/3nid_L_L.ann
sabdab_dataset/3nid/sequence/3nid_raw.pdb
sabdab_dataset/3nid/sequence/3nid_H_VH.fa
sabdab_dataset/3nid/sequence/3nid_L_VL.fa
sabdab_dataset/3nid/structure/3nid.pdb
sabdab_dataset/3nid/structure/chothia/3nid.pdb
false
false
test
3nif
E
F
0
C
protein
null
integrin alphaiib beta3
CELL ADHESION/BLOOD CLOTTING
06/15/10
The Closed Headpiece of Integrin IIb 3 and its Complex with an IIb 3 -Specific Antagonist That Does Not Induce Opening
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Zhu, J.H., Zhu, J.Q., Springer, T.A.
2.4
X-RAY DIFFRACTION
0.216
0.176
false
true
IGHV14
IGKV14
Kappa
null
null
null
null
null
sabdab_dataset/3nif/abangle/3nif.abangle
sabdab_dataset/3nif/annotation/3nif_E_VH.ann
sabdab_dataset/3nif/annotation/3nif_F_VL.ann
sabdab_dataset/3nif/imgt/3nif_E_H.ann
sabdab_dataset/3nif/imgt/3nif_F_L.ann
sabdab_dataset/3nif/sequence/3nif_raw.pdb
sabdab_dataset/3nif/sequence/3nif_E_VH.fa
sabdab_dataset/3nif/sequence/3nif_F_VL.fa
sabdab_dataset/3nif/structure/3nif.pdb
sabdab_dataset/3nif/structure/chothia/3nif.pdb
false
false
train
3nif
H
L
0
A | D
protein | protein
NA | NA
integrin alphaiib beta3 | integrin beta-3
CELL ADHESION/BLOOD CLOTTING
06/15/10
The Closed Headpiece of Integrin IIb 3 and its Complex with an IIb 3 -Specific Antagonist That Does Not Induce Opening
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens | homo sapiens
Zhu, J.H., Zhu, J.Q., Springer, T.A.
2.4
X-RAY DIFFRACTION
0.216
0.176
false
true
IGHV14
IGKV14
Kappa
null
null
null
null
null
sabdab_dataset/3nif/abangle/3nif.abangle
sabdab_dataset/3nif/annotation/3nif_H_VH.ann
sabdab_dataset/3nif/annotation/3nif_L_VL.ann
sabdab_dataset/3nif/imgt/3nif_H_H.ann
sabdab_dataset/3nif/imgt/3nif_L_L.ann
sabdab_dataset/3nif/sequence/3nif_raw.pdb
sabdab_dataset/3nif/sequence/3nif_H_VH.fa
sabdab_dataset/3nif/sequence/3nif_L_VL.fa
sabdab_dataset/3nif/structure/3nif.pdb
sabdab_dataset/3nif/structure/chothia/3nif.pdb
false
false
train
3nig
E
F
0
C
protein
null
integrin alpha-iib
CELL ADHESION/BLOOD CLOTTING
06/15/10
The Closed Headpiece of Integrin IIb 3 and its Complex with an IIb 3 -Specific Antagonist That Does Not Induce Opening
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Zhu, J.H., Zhu, J.Q., Springer, T.A.
2.25
X-RAY DIFFRACTION
0.212
0.172
false
true
IGHV14
IGKV14
Kappa
null
null
null
null
null
sabdab_dataset/3nig/abangle/3nig.abangle
sabdab_dataset/3nig/annotation/3nig_E_VH.ann
sabdab_dataset/3nig/annotation/3nig_F_VL.ann
sabdab_dataset/3nig/imgt/3nig_E_H.ann
sabdab_dataset/3nig/imgt/3nig_F_L.ann
sabdab_dataset/3nig/sequence/3nig_raw.pdb
sabdab_dataset/3nig/sequence/3nig_E_VH.fa
sabdab_dataset/3nig/sequence/3nig_F_VL.fa
sabdab_dataset/3nig/structure/3nig.pdb
sabdab_dataset/3nig/structure/chothia/3nig.pdb
false
false
train
3nig
H
L
0
A | D
protein | protein
NA | NA
integrin alpha-iib | integrin beta-3
CELL ADHESION/BLOOD CLOTTING
06/15/10
The Closed Headpiece of Integrin IIb 3 and its Complex with an IIb 3 -Specific Antagonist That Does Not Induce Opening
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens | homo sapiens
Zhu, J.H., Zhu, J.Q., Springer, T.A.
2.25
X-RAY DIFFRACTION
0.212
0.172
false
true
IGHV14
IGKV14
Kappa
null
null
null
null
null
sabdab_dataset/3nig/abangle/3nig.abangle
sabdab_dataset/3nig/annotation/3nig_H_VH.ann
sabdab_dataset/3nig/annotation/3nig_L_VL.ann
sabdab_dataset/3nig/imgt/3nig_H_H.ann
sabdab_dataset/3nig/imgt/3nig_L_L.ann
sabdab_dataset/3nig/sequence/3nig_raw.pdb
sabdab_dataset/3nig/sequence/3nig_H_VH.fa
sabdab_dataset/3nig/sequence/3nig_L_VL.fa
sabdab_dataset/3nig/structure/3nig.pdb
sabdab_dataset/3nig/structure/chothia/3nig.pdb
false
false
train
3nn8
A
B
0
null
null
null
null
IMMUNE SYSTEM
06/23/10
Crystal structure of engineered antibody fragment based on 3D5
MUS MUSCULUS
mus musculus
mus musculus
null
Lieberman, R.L., Maynard, J.A., Drury, J.E., Pai, J., Culver, J.A.
3.1
X-RAY DIFFRACTION
0.238
0.183
true
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3nn8/abangle/3nn8.abangle
sabdab_dataset/3nn8/annotation/3nn8_A_VH.ann
sabdab_dataset/3nn8/annotation/3nn8_B_VL.ann
sabdab_dataset/3nn8/imgt/3nn8_A_H.ann
sabdab_dataset/3nn8/imgt/3nn8_B_L.ann
sabdab_dataset/3nn8/sequence/3nn8_raw.pdb
sabdab_dataset/3nn8/sequence/3nn8_A_VH.fa
sabdab_dataset/3nn8/sequence/3nn8_B_VL.fa
sabdab_dataset/3nn8/structure/3nn8.pdb
sabdab_dataset/3nn8/structure/chothia/3nn8.pdb
false
false
train
3nn8
C
F
0
null
null
null
null
IMMUNE SYSTEM
06/23/10
Crystal structure of engineered antibody fragment based on 3D5
MUS MUSCULUS
mus musculus
mus musculus
null
Lieberman, R.L., Maynard, J.A., Drury, J.E., Pai, J., Culver, J.A.
3.1
X-RAY DIFFRACTION
0.238
0.183
true
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3nn8/abangle/3nn8.abangle
sabdab_dataset/3nn8/annotation/3nn8_C_VH.ann
sabdab_dataset/3nn8/annotation/3nn8_F_VL.ann
sabdab_dataset/3nn8/imgt/3nn8_C_H.ann
sabdab_dataset/3nn8/imgt/3nn8_F_L.ann
sabdab_dataset/3nn8/sequence/3nn8_raw.pdb
sabdab_dataset/3nn8/sequence/3nn8_C_VH.fa
sabdab_dataset/3nn8/sequence/3nn8_F_VL.fa
sabdab_dataset/3nn8/structure/3nn8.pdb
sabdab_dataset/3nn8/structure/chothia/3nn8.pdb
false
false
validation
3nn8
D
E
0
null
null
null
null
IMMUNE SYSTEM
06/23/10
Crystal structure of engineered antibody fragment based on 3D5
MUS MUSCULUS
mus musculus
mus musculus
null
Lieberman, R.L., Maynard, J.A., Drury, J.E., Pai, J., Culver, J.A.
3.1
X-RAY DIFFRACTION
0.238
0.183
true
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3nn8/abangle/3nn8.abangle
sabdab_dataset/3nn8/annotation/3nn8_D_VH.ann
sabdab_dataset/3nn8/annotation/3nn8_E_VL.ann
sabdab_dataset/3nn8/imgt/3nn8_D_H.ann
sabdab_dataset/3nn8/imgt/3nn8_E_L.ann
sabdab_dataset/3nn8/sequence/3nn8_raw.pdb
sabdab_dataset/3nn8/sequence/3nn8_D_VH.fa
sabdab_dataset/3nn8/sequence/3nn8_E_VL.fa
sabdab_dataset/3nn8/structure/3nn8.pdb
sabdab_dataset/3nn8/structure/chothia/3nn8.pdb
false
false
train
3nn8
G
H
0
null
null
null
null
IMMUNE SYSTEM
06/23/10
Crystal structure of engineered antibody fragment based on 3D5
MUS MUSCULUS
mus musculus
mus musculus
null
Lieberman, R.L., Maynard, J.A., Drury, J.E., Pai, J., Culver, J.A.
3.1
X-RAY DIFFRACTION
0.238
0.183
true
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3nn8/abangle/3nn8.abangle
sabdab_dataset/3nn8/annotation/3nn8_G_VH.ann
sabdab_dataset/3nn8/annotation/3nn8_H_VL.ann
sabdab_dataset/3nn8/imgt/3nn8_G_H.ann
sabdab_dataset/3nn8/imgt/3nn8_H_L.ann
sabdab_dataset/3nn8/sequence/3nn8_raw.pdb
sabdab_dataset/3nn8/sequence/3nn8_G_VH.fa
sabdab_dataset/3nn8/sequence/3nn8_H_VL.fa
sabdab_dataset/3nn8/structure/3nn8.pdb
sabdab_dataset/3nn8/structure/chothia/3nn8.pdb
false
false
train
3nps
B
C
0
A
protein
null
suppressor of tumorigenicity 14 protein
HYDROLASE/IMMUNE SYSTEM
06/29/10
Crystal structure of membrane-type serine protease 1 (MT-SP1) in complex with the Fab Inhibitor S4
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Baharuddin, A.
1.5
X-RAY DIFFRACTION
0.228
0.188
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/3nps/abangle/3nps.abangle
sabdab_dataset/3nps/annotation/3nps_B_VH.ann
sabdab_dataset/3nps/annotation/3nps_C_VL.ann
sabdab_dataset/3nps/imgt/3nps_B_H.ann
sabdab_dataset/3nps/imgt/3nps_C_L.ann
sabdab_dataset/3nps/sequence/3nps_raw.pdb
sabdab_dataset/3nps/sequence/3nps_B_VH.fa
sabdab_dataset/3nps/sequence/3nps_C_VL.fa
sabdab_dataset/3nps/structure/3nps.pdb
sabdab_dataset/3nps/structure/chothia/3nps.pdb
true
false
validation
3ntc
H
L
0
null
null
null
null
IMMUNE SYSTEM
07/03/10
Crystal structure of KD-247 Fab, an anti-V3 antibody that inhibits HIV-1 Entry
HOMO SAPIENS, MUS MUSCULUS
homo sapiens, mus musculus
homo sapiens, mus musculus
null
Sarafianos, S.G., Kirby, K.A.
1.55
X-RAY DIFFRACTION
0.222
0.182
false
true
IGHV1
IGKV8
Kappa
null
null
null
null
null
sabdab_dataset/3ntc/abangle/3ntc.abangle
sabdab_dataset/3ntc/annotation/3ntc_H_VH.ann
sabdab_dataset/3ntc/annotation/3ntc_L_VL.ann
sabdab_dataset/3ntc/imgt/3ntc_H_H.ann
sabdab_dataset/3ntc/imgt/3ntc_L_L.ann
sabdab_dataset/3ntc/sequence/3ntc_raw.pdb
sabdab_dataset/3ntc/sequence/3ntc_H_VH.fa
sabdab_dataset/3ntc/sequence/3ntc_L_VL.fa
sabdab_dataset/3ntc/structure/3ntc.pdb
sabdab_dataset/3ntc/structure/chothia/3ntc.pdb
true
false
test
3nz8
A
B
0
null
null
null
null
IMMUNE SYSTEM
07/16/10
Crystal structure of the HIV-2 neutralizing Fab fragment 7C8
MUS MUSCULUS
mus musculus
mus musculus
null
Uchtenhagen, H, Friemann, R, Raszewski, G, Spetz, A-L, Nilsson, L, Achour, A
2.7
X-RAY DIFFRACTION
0.273
0.226
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3nz8/abangle/3nz8.abangle
sabdab_dataset/3nz8/annotation/3nz8_A_VH.ann
sabdab_dataset/3nz8/annotation/3nz8_B_VL.ann
sabdab_dataset/3nz8/imgt/3nz8_A_H.ann
sabdab_dataset/3nz8/imgt/3nz8_B_L.ann
sabdab_dataset/3nz8/sequence/3nz8_raw.pdb
sabdab_dataset/3nz8/sequence/3nz8_A_VH.fa
sabdab_dataset/3nz8/sequence/3nz8_B_VL.fa
sabdab_dataset/3nz8/structure/3nz8.pdb
sabdab_dataset/3nz8/structure/chothia/3nz8.pdb
true
false
train
3nz8
H
L
0
null
null
null
null
IMMUNE SYSTEM
07/16/10
Crystal structure of the HIV-2 neutralizing Fab fragment 7C8
MUS MUSCULUS
mus musculus
mus musculus
null
Uchtenhagen, H, Friemann, R, Raszewski, G, Spetz, A-L, Nilsson, L, Achour, A
2.7
X-RAY DIFFRACTION
0.273
0.226
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3nz8/abangle/3nz8.abangle
sabdab_dataset/3nz8/annotation/3nz8_H_VH.ann
sabdab_dataset/3nz8/annotation/3nz8_L_VL.ann
sabdab_dataset/3nz8/imgt/3nz8_H_H.ann
sabdab_dataset/3nz8/imgt/3nz8_L_L.ann
sabdab_dataset/3nz8/sequence/3nz8_raw.pdb
sabdab_dataset/3nz8/sequence/3nz8_H_VH.fa
sabdab_dataset/3nz8/sequence/3nz8_L_VL.fa
sabdab_dataset/3nz8/structure/3nz8.pdb
sabdab_dataset/3nz8/structure/chothia/3nz8.pdb
true
false
test
3nzh
H
L
0
null
null
null
null
IMMUNE SYSTEM
07/16/10
Crystal structure of anti-emmprin antibody 5F6 FAB
HOMO SAPIENS, MUS MUSCULUS
homo sapiens, mus musculus
homo sapiens, mus musculus
null
Teplyakov, A., Obmolova, G., Malia, T., Gilliland, G.L.
2.0
X-RAY DIFFRACTION
0.243
0.195
false
true
IGHV6
IGKV6
Kappa
null
null
null
null
null
sabdab_dataset/3nzh/abangle/3nzh.abangle
sabdab_dataset/3nzh/annotation/3nzh_H_VH.ann
sabdab_dataset/3nzh/annotation/3nzh_L_VL.ann
sabdab_dataset/3nzh/imgt/3nzh_H_H.ann
sabdab_dataset/3nzh/imgt/3nzh_L_L.ann
sabdab_dataset/3nzh/sequence/3nzh_raw.pdb
sabdab_dataset/3nzh/sequence/3nzh_H_VH.fa
sabdab_dataset/3nzh/sequence/3nzh_L_VL.fa
sabdab_dataset/3nzh/structure/3nzh.pdb
sabdab_dataset/3nzh/structure/chothia/3nzh.pdb
true
false
train
3o0r
H
L
0
B | C
protein | protein
NA | NA
nitric oxide reductase subunit b | nitric oxide reductase subunit c
IMMUNE SYSTEM/OXIDOREDUCTASE
07/20/10
Crystal structure of nitric oxide reductase from Pseudomonas aeruginosa in complex with antibody fragment
MUS MUSCULUS; PSEUDOMONAS AERUGINOSA
mus musculus
mus musculus
pseudomonas aeruginosa | pseudomonas aeruginosa
Hino, T., Matsumoto, Y., Nagano, S., Sugimoto, H., Fukumori, Y., Murata, T., Iwata, S., Shiro, Y.
2.7
X-RAY DIFFRACTION
0.247
0.185
false
false
IGHV1
IGKV16
Kappa
null
null
null
null
null
sabdab_dataset/3o0r/abangle/3o0r.abangle
sabdab_dataset/3o0r/annotation/3o0r_H_VH.ann
sabdab_dataset/3o0r/annotation/3o0r_L_VL.ann
sabdab_dataset/3o0r/imgt/3o0r_H_H.ann
sabdab_dataset/3o0r/imgt/3o0r_L_L.ann
sabdab_dataset/3o0r/sequence/3o0r_raw.pdb
sabdab_dataset/3o0r/sequence/3o0r_H_VH.fa
sabdab_dataset/3o0r/sequence/3o0r_L_VL.fa
sabdab_dataset/3o0r/structure/3o0r.pdb
sabdab_dataset/3o0r/structure/chothia/3o0r.pdb
true
false
train
3o11
B
A
0
null
null
null
null
IMMUNE SYSTEM
07/20/10
Anti-beta-amyloid antibody c706 fab in space group c2
MUS MUSCULUS, HOMO SAPIENS
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Teplyakov, A., Obmolova, G., Malia, T., Gilliland, G.L.
2.8
X-RAY DIFFRACTION
0.304
0.220
false
true
IGHV1
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/3o11/abangle/3o11.abangle
sabdab_dataset/3o11/annotation/3o11_B_VH.ann
sabdab_dataset/3o11/annotation/3o11_A_VL.ann
sabdab_dataset/3o11/imgt/3o11_B_H.ann
sabdab_dataset/3o11/imgt/3o11_A_L.ann
sabdab_dataset/3o11/sequence/3o11_raw.pdb
sabdab_dataset/3o11/sequence/3o11_B_VH.fa
sabdab_dataset/3o11/sequence/3o11_A_VL.fa
sabdab_dataset/3o11/structure/3o11.pdb
sabdab_dataset/3o11/structure/chothia/3o11.pdb
false
false
train
3o11
H
L
0
null
null
null
null
IMMUNE SYSTEM
07/20/10
Anti-beta-amyloid antibody c706 fab in space group c2
MUS MUSCULUS, HOMO SAPIENS
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Teplyakov, A., Obmolova, G., Malia, T., Gilliland, G.L.
2.8
X-RAY DIFFRACTION
0.304
0.220
false
true
IGHV1
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/3o11/abangle/3o11.abangle
sabdab_dataset/3o11/annotation/3o11_H_VH.ann
sabdab_dataset/3o11/annotation/3o11_L_VL.ann
sabdab_dataset/3o11/imgt/3o11_H_H.ann
sabdab_dataset/3o11/imgt/3o11_L_L.ann
sabdab_dataset/3o11/sequence/3o11_raw.pdb
sabdab_dataset/3o11/sequence/3o11_H_VH.fa
sabdab_dataset/3o11/sequence/3o11_L_VL.fa
sabdab_dataset/3o11/structure/3o11.pdb
sabdab_dataset/3o11/structure/chothia/3o11.pdb
false
false
validation
3o2d
H
L
0
A
protein
null
t-cell surface glycoprotein cd4
IMMUNE SYSTEM
07/22/10
Crystal structure of HIV-1 primary receptor CD4 in complex with a potent antiviral antibody
MUS MUSCULUS; HOMO SAPIENS
mus musculus
mus musculus
homo sapiens
Freeman, M.M., Seaman, M.S., Rits-Volloch, S., Hong, X., Ho, D.D., Chen, B.
2.19
X-RAY DIFFRACTION
0.224
0.192
false
true
IGHV1
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/3o2d/abangle/3o2d.abangle
sabdab_dataset/3o2d/annotation/3o2d_H_VH.ann
sabdab_dataset/3o2d/annotation/3o2d_L_VL.ann
sabdab_dataset/3o2d/imgt/3o2d_H_H.ann
sabdab_dataset/3o2d/imgt/3o2d_L_L.ann
sabdab_dataset/3o2d/sequence/3o2d_raw.pdb
sabdab_dataset/3o2d/sequence/3o2d_H_VH.fa
sabdab_dataset/3o2d/sequence/3o2d_L_VL.fa
sabdab_dataset/3o2d/structure/3o2d.pdb
sabdab_dataset/3o2d/structure/chothia/3o2d.pdb
true
false
train
3o2v
H
L
0
null
null
null
null
IMMUNE SYSTEM
07/22/10
Crystal structure of 1E9 PheL89Ser/LeuH47Trp/MetH100bPhe, an engineered Diels-Alderase Fab with modified specificity and catalytic activity
MUS MUSCULUS, HOMO SAPIENS
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Verdino, P., Wilson, I.A.
2.3
X-RAY DIFFRACTION
0.219
0.192
false
true
IGHV9
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3o2v/abangle/3o2v.abangle
sabdab_dataset/3o2v/annotation/3o2v_H_VH.ann
sabdab_dataset/3o2v/annotation/3o2v_L_VL.ann
sabdab_dataset/3o2v/imgt/3o2v_H_H.ann
sabdab_dataset/3o2v/imgt/3o2v_L_L.ann
sabdab_dataset/3o2v/sequence/3o2v_raw.pdb
sabdab_dataset/3o2v/sequence/3o2v_H_VH.fa
sabdab_dataset/3o2v/sequence/3o2v_L_VL.fa
sabdab_dataset/3o2v/structure/3o2v.pdb
sabdab_dataset/3o2v/structure/chothia/3o2v.pdb
false
false
train
3o2w
H
L
0
L
Hapten
O2W
METHYL ({[(3AR,4R,7R,7AR)-2-(4-AMINOPHENYL)-1,3-DIOXOOCTAHYDRO-4H-4,7-ETHANOISOINDOL-4-YL]CARBAMOYL}OXY)ACETATE
IMMUNE SYSTEM
07/22/10
Crystal structure of the 1E9 PheL89Ser/LeuH47Trp/MetH100bPhe Fab in complex with a 39A11 transition state analog
MUS MUSCULUS, HOMO SAPIENS
mus musculus, homo sapiens
mus musculus, homo sapiens
mus musculus, homo sapiens
Verdino, P., Wilson, I.A.
2.55
X-RAY DIFFRACTION
0.248
0.207
false
true
IGHV9
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3o2w/abangle/3o2w.abangle
sabdab_dataset/3o2w/annotation/3o2w_H_VH.ann
sabdab_dataset/3o2w/annotation/3o2w_L_VL.ann
sabdab_dataset/3o2w/imgt/3o2w_H_H.ann
sabdab_dataset/3o2w/imgt/3o2w_L_L.ann
sabdab_dataset/3o2w/sequence/3o2w_raw.pdb
sabdab_dataset/3o2w/sequence/3o2w_H_VH.fa
sabdab_dataset/3o2w/sequence/3o2w_L_VL.fa
sabdab_dataset/3o2w/structure/3o2w.pdb
sabdab_dataset/3o2w/structure/chothia/3o2w.pdb
true
false
validation
3o41
A
B
0
C
peptide
null
fusion glycoprotein f1
IMMUNE SYSTEM/VIRAL PROTEIN
07/26/10
Crystal Structure of 101F Fab Bound to 15-mer Peptide Epitope
MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
human respiratory syncytial virus a
McLellan, J.S., Chen, M., Chang, J.S., Yang, Y., Kim, A., Graham, B.S., Kwong, P.D.
1.95
X-RAY DIFFRACTION
0.217
0.177
false
true
IGHV8
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/3o41/abangle/3o41.abangle
sabdab_dataset/3o41/annotation/3o41_A_VH.ann
sabdab_dataset/3o41/annotation/3o41_B_VL.ann
sabdab_dataset/3o41/imgt/3o41_A_H.ann
sabdab_dataset/3o41/imgt/3o41_B_L.ann
sabdab_dataset/3o41/sequence/3o41_raw.pdb
sabdab_dataset/3o41/sequence/3o41_A_VH.fa
sabdab_dataset/3o41/sequence/3o41_B_VL.fa
sabdab_dataset/3o41/structure/3o41.pdb
sabdab_dataset/3o41/structure/chothia/3o41.pdb
false
false
train
3o41
H
L
0
P
peptide
null
fusion glycoprotein f1
IMMUNE SYSTEM/VIRAL PROTEIN
07/26/10
Crystal Structure of 101F Fab Bound to 15-mer Peptide Epitope
MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
human respiratory syncytial virus a
McLellan, J.S., Chen, M., Chang, J.S., Yang, Y., Kim, A., Graham, B.S., Kwong, P.D.
1.95
X-RAY DIFFRACTION
0.217
0.177
false
true
IGHV8
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/3o41/abangle/3o41.abangle
sabdab_dataset/3o41/annotation/3o41_H_VH.ann
sabdab_dataset/3o41/annotation/3o41_L_VL.ann
sabdab_dataset/3o41/imgt/3o41_H_H.ann
sabdab_dataset/3o41/imgt/3o41_L_L.ann
sabdab_dataset/3o41/sequence/3o41_raw.pdb
sabdab_dataset/3o41/sequence/3o41_H_VH.fa
sabdab_dataset/3o41/sequence/3o41_L_VL.fa
sabdab_dataset/3o41/structure/3o41.pdb
sabdab_dataset/3o41/structure/chothia/3o41.pdb
false
false
train
3o45
A
B
0
C
peptide
null
fusion glycoprotein f1
IMMUNE SYSTEM/VIRAL PROTEIN
07/26/10
Crystal Structure of 101F Fab Bound to 17-mer Peptide Epitope
MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
null
McLellan, J.S., Chen, M., Chang, J.S., Yang, Y., Kim, A., Graham, B.S., Kwong, P.D.
2.872
X-RAY DIFFRACTION
0.254
0.200
false
true
IGHV8
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/3o45/abangle/3o45.abangle
sabdab_dataset/3o45/annotation/3o45_A_VH.ann
sabdab_dataset/3o45/annotation/3o45_B_VL.ann
sabdab_dataset/3o45/imgt/3o45_A_H.ann
sabdab_dataset/3o45/imgt/3o45_B_L.ann
sabdab_dataset/3o45/sequence/3o45_raw.pdb
sabdab_dataset/3o45/sequence/3o45_A_VH.fa
sabdab_dataset/3o45/sequence/3o45_B_VL.fa
sabdab_dataset/3o45/structure/3o45.pdb
sabdab_dataset/3o45/structure/chothia/3o45.pdb
false
false
validation
3o45
H
L
0
P
peptide
null
fusion glycoprotein f1
IMMUNE SYSTEM/VIRAL PROTEIN
07/26/10
Crystal Structure of 101F Fab Bound to 17-mer Peptide Epitope
MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
null
McLellan, J.S., Chen, M., Chang, J.S., Yang, Y., Kim, A., Graham, B.S., Kwong, P.D.
2.872
X-RAY DIFFRACTION
0.254
0.200
false
true
IGHV8
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/3o45/abangle/3o45.abangle
sabdab_dataset/3o45/annotation/3o45_H_VH.ann
sabdab_dataset/3o45/annotation/3o45_L_VL.ann
sabdab_dataset/3o45/imgt/3o45_H_H.ann
sabdab_dataset/3o45/imgt/3o45_L_L.ann
sabdab_dataset/3o45/sequence/3o45_raw.pdb
sabdab_dataset/3o45/sequence/3o45_H_VH.fa
sabdab_dataset/3o45/sequence/3o45_L_VL.fa
sabdab_dataset/3o45/structure/3o45.pdb
sabdab_dataset/3o45/structure/chothia/3o45.pdb
false
false
train
3o6k
H
L
0
null
null
null
null
IMMUNE SYSTEM
07/29/10
Crystal structure of anti-Tat HIV Fab'11H6H1
MUS MUSCULUS
mus musculus
mus musculus
null
Serriere, J., Gouet, P., Guillon, C.
2.0
X-RAY DIFFRACTION
0.246
0.199
false
false
IGHV5
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3o6k/abangle/3o6k.abangle
sabdab_dataset/3o6k/annotation/3o6k_H_VH.ann
sabdab_dataset/3o6k/annotation/3o6k_L_VL.ann
sabdab_dataset/3o6k/imgt/3o6k_H_H.ann
sabdab_dataset/3o6k/imgt/3o6k_L_L.ann
sabdab_dataset/3o6k/sequence/3o6k_raw.pdb
sabdab_dataset/3o6k/sequence/3o6k_H_VH.fa
sabdab_dataset/3o6k/sequence/3o6k_L_VL.fa
sabdab_dataset/3o6k/structure/3o6k.pdb
sabdab_dataset/3o6k/structure/chothia/3o6k.pdb
false
false
train
3o6l
H
L
0
C
peptide
null
protein tat 15-mer peptide
IMMUNE SYSTEM
07/29/10
Anti-Tat HIV 11H6H1 Fab' complexed with a 15-mer Tat peptide
MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
null
Serriere, J., Gouet, P., Guillon, C.
2.1
X-RAY DIFFRACTION
0.227
0.186
false
false
IGHV5
IGKV1
Kappa
0
-9.93
Other
16
21035463
sabdab_dataset/3o6l/abangle/3o6l.abangle
sabdab_dataset/3o6l/annotation/3o6l_H_VH.ann
sabdab_dataset/3o6l/annotation/3o6l_L_VL.ann
sabdab_dataset/3o6l/imgt/3o6l_H_H.ann
sabdab_dataset/3o6l/imgt/3o6l_L_L.ann
sabdab_dataset/3o6l/sequence/3o6l_raw.pdb
sabdab_dataset/3o6l/sequence/3o6l_H_VH.fa
sabdab_dataset/3o6l/sequence/3o6l_L_VL.fa
sabdab_dataset/3o6l/structure/3o6l.pdb
sabdab_dataset/3o6l/structure/chothia/3o6l.pdb
false
false
train
3o6m
H
L
0
C
peptide
null
protein tat 9-mer peptide
IMMUNE SYSTEM
07/29/10
Anti-Tat HIV 11H6H1 Fab' complexed with a 9-mer Tat peptide
MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
null
Serriere, J., Gouet, P., Guillon, C.
2.4
X-RAY DIFFRACTION
0.290
0.211
false
false
IGHV5
IGKV1
Kappa
0
-9.89
Other
16
21035463
sabdab_dataset/3o6m/abangle/3o6m.abangle
sabdab_dataset/3o6m/annotation/3o6m_H_VH.ann
sabdab_dataset/3o6m/annotation/3o6m_L_VL.ann
sabdab_dataset/3o6m/imgt/3o6m_H_H.ann
sabdab_dataset/3o6m/imgt/3o6m_L_L.ann
sabdab_dataset/3o6m/sequence/3o6m_raw.pdb
sabdab_dataset/3o6m/sequence/3o6m_H_VH.fa
sabdab_dataset/3o6m/sequence/3o6m_L_VL.fa
sabdab_dataset/3o6m/structure/3o6m.pdb
sabdab_dataset/3o6m/structure/chothia/3o6m.pdb
true
false
test
3oau
H
L
0
H
carbohydrate
MAN
polysaccharide
IMMUNE SYSTEM
08/05/10
Antibody 2G12 Recognizes Di-Mannose Equivalently in Domain- and Non-Domain-Exchanged Forms, but only binds the HIV-1 Glycan Shield if Domain-Exchanged
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Doores, K.J., Fulton, Z., Huber, M., Wilson, I.A., Burton, D.R.
1.9
X-RAY DIFFRACTION
0.243
0.212
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3oau/abangle/3oau.abangle
sabdab_dataset/3oau/annotation/3oau_H_VH.ann
sabdab_dataset/3oau/annotation/3oau_L_VL.ann
sabdab_dataset/3oau/imgt/3oau_H_H.ann
sabdab_dataset/3oau/imgt/3oau_L_L.ann
sabdab_dataset/3oau/sequence/3oau_raw.pdb
sabdab_dataset/3oau/sequence/3oau_H_VH.fa
sabdab_dataset/3oau/sequence/3oau_L_VL.fa
sabdab_dataset/3oau/structure/3oau.pdb
sabdab_dataset/3oau/structure/chothia/3oau.pdb
false
false
train
3oay
H
L
0
H
Hapten
BDF
BETA-D-FRUCTOPYRANOSE
IMMUNE SYSTEM
08/05/10
A non-self sugar mimic of the HIV glycan shield shows enhanced antigenicity
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Doores, K.J., Fulton, Z., Hong, V., Patel, M.K., Scanlan, C.N., Wormald, M.R., Finn, M.G., Burton, D.R., Wilson, I.A., Davis, B.G
1.95
X-RAY DIFFRACTION
0.223
0.182
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3oay/abangle/3oay.abangle
sabdab_dataset/3oay/annotation/3oay_H_VH.ann
sabdab_dataset/3oay/annotation/3oay_L_VL.ann
sabdab_dataset/3oay/imgt/3oay_H_H.ann
sabdab_dataset/3oay/imgt/3oay_L_L.ann
sabdab_dataset/3oay/sequence/3oay_raw.pdb
sabdab_dataset/3oay/sequence/3oay_H_VH.fa
sabdab_dataset/3oay/sequence/3oay_L_VL.fa
sabdab_dataset/3oay/structure/3oay.pdb
sabdab_dataset/3oay/structure/chothia/3oay.pdb
false
false
train
3oay
M
K
0
M
Hapten
BDF
BETA-D-FRUCTOPYRANOSE
IMMUNE SYSTEM
08/05/10
A non-self sugar mimic of the HIV glycan shield shows enhanced antigenicity
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Doores, K.J., Fulton, Z., Hong, V., Patel, M.K., Scanlan, C.N., Wormald, M.R., Finn, M.G., Burton, D.R., Wilson, I.A., Davis, B.G
1.95
X-RAY DIFFRACTION
0.223
0.182
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3oay/abangle/3oay.abangle
sabdab_dataset/3oay/annotation/3oay_M_VH.ann
sabdab_dataset/3oay/annotation/3oay_K_VL.ann
sabdab_dataset/3oay/imgt/3oay_M_H.ann
sabdab_dataset/3oay/imgt/3oay_K_L.ann
sabdab_dataset/3oay/sequence/3oay_raw.pdb
sabdab_dataset/3oay/sequence/3oay_M_VH.fa
sabdab_dataset/3oay/sequence/3oay_K_VL.fa
sabdab_dataset/3oay/structure/3oay.pdb
sabdab_dataset/3oay/structure/chothia/3oay.pdb
false
false
train
3oaz
H
L
0
null
null
null
null
IMMUNE SYSTEM
08/06/10
A non-self sugar mimic of the HIV glycan shield shows enhanced antigenicity
HOMO SAPIENS
homo sapiens
homo sapiens
null
Doores, K.J., Fulton, Z., Hong, V., Patel, M.K., Scanlan, C.N., Wormald, M.R., Finn, M.G., Burton, D.R., Wilson, I.A., Davis, B.G
1.75
X-RAY DIFFRACTION
0.217
0.176
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3oaz/abangle/3oaz.abangle
sabdab_dataset/3oaz/annotation/3oaz_H_VH.ann
sabdab_dataset/3oaz/annotation/3oaz_L_VL.ann
sabdab_dataset/3oaz/imgt/3oaz_H_H.ann
sabdab_dataset/3oaz/imgt/3oaz_L_L.ann
sabdab_dataset/3oaz/sequence/3oaz_raw.pdb
sabdab_dataset/3oaz/sequence/3oaz_H_VH.fa
sabdab_dataset/3oaz/sequence/3oaz_L_VL.fa
sabdab_dataset/3oaz/structure/3oaz.pdb
sabdab_dataset/3oaz/structure/chothia/3oaz.pdb
false
false
train
3oaz
M
K
0
null
null
null
null
IMMUNE SYSTEM
08/06/10
A non-self sugar mimic of the HIV glycan shield shows enhanced antigenicity
HOMO SAPIENS
homo sapiens
homo sapiens
null
Doores, K.J., Fulton, Z., Hong, V., Patel, M.K., Scanlan, C.N., Wormald, M.R., Finn, M.G., Burton, D.R., Wilson, I.A., Davis, B.G
1.75
X-RAY DIFFRACTION
0.217
0.176
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3oaz/abangle/3oaz.abangle
sabdab_dataset/3oaz/annotation/3oaz_M_VH.ann
sabdab_dataset/3oaz/annotation/3oaz_K_VL.ann
sabdab_dataset/3oaz/imgt/3oaz_M_H.ann
sabdab_dataset/3oaz/imgt/3oaz_K_L.ann
sabdab_dataset/3oaz/sequence/3oaz_raw.pdb
sabdab_dataset/3oaz/sequence/3oaz_M_VH.fa
sabdab_dataset/3oaz/sequence/3oaz_K_VL.fa
sabdab_dataset/3oaz/structure/3oaz.pdb
sabdab_dataset/3oaz/structure/chothia/3oaz.pdb
false
false
train
3ob0
H
L
0
H
Hapten
2M6
7-DEOXY-L-GLYCERO-ALPHA-D-MANNO-HEPTOPYRANOSYL-(1->2)-ALPHA-D-MANNOPYRANOSYL-(1->2)-ALPHA-D-MANNOPYRANOSYL-(1->3)-ALPHA-D-MANNOPYRANOSE
IMMUNE SYSTEM
08/06/10
A non-self sugar mimic of the HIV glycan shield shows enhanced antigenicity
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Doores, K.J., Fulton, Z., Hong, V., Patel, M.K., Scanlan, C.N., Wormald, M.R., Finn, M.G., Burton, D.R., Wilson, I.A., Davis, B.G
2.85
X-RAY DIFFRACTION
0.280
0.232
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3ob0/abangle/3ob0.abangle
sabdab_dataset/3ob0/annotation/3ob0_H_VH.ann
sabdab_dataset/3ob0/annotation/3ob0_L_VL.ann
sabdab_dataset/3ob0/imgt/3ob0_H_H.ann
sabdab_dataset/3ob0/imgt/3ob0_L_L.ann
sabdab_dataset/3ob0/sequence/3ob0_raw.pdb
sabdab_dataset/3ob0/sequence/3ob0_H_VH.fa
sabdab_dataset/3ob0/sequence/3ob0_L_VL.fa
sabdab_dataset/3ob0/structure/3ob0.pdb
sabdab_dataset/3ob0/structure/chothia/3ob0.pdb
false
false
train
3ob0
M
K
0
M
Hapten
2M6
7-DEOXY-L-GLYCERO-ALPHA-D-MANNO-HEPTOPYRANOSYL-(1->2)-ALPHA-D-MANNOPYRANOSYL-(1->2)-ALPHA-D-MANNOPYRANOSYL-(1->3)-ALPHA-D-MANNOPYRANOSE
IMMUNE SYSTEM
08/06/10
A non-self sugar mimic of the HIV glycan shield shows enhanced antigenicity
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Doores, K.J., Fulton, Z., Hong, V., Patel, M.K., Scanlan, C.N., Wormald, M.R., Finn, M.G., Burton, D.R., Wilson, I.A., Davis, B.G
2.85
X-RAY DIFFRACTION
0.280
0.232
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3ob0/abangle/3ob0.abangle
sabdab_dataset/3ob0/annotation/3ob0_M_VH.ann
sabdab_dataset/3ob0/annotation/3ob0_K_VL.ann
sabdab_dataset/3ob0/imgt/3ob0_M_H.ann
sabdab_dataset/3ob0/imgt/3ob0_K_L.ann
sabdab_dataset/3ob0/sequence/3ob0_raw.pdb
sabdab_dataset/3ob0/sequence/3ob0_M_VH.fa
sabdab_dataset/3ob0/sequence/3ob0_K_VL.fa
sabdab_dataset/3ob0/structure/3ob0.pdb
sabdab_dataset/3ob0/structure/chothia/3ob0.pdb
false
false
train
3ogc
A
B
0
C
protein
null
voltage-gated potassium channel
MEMBRANE PROTEIN
08/16/10
KcsA E71A variant in presence of Na+
MUS MUSCULUS; STREPTOMYCES LIVIDANS
mus musculus
mus musculus
streptomyces lividans
McCoy, J.G., Nimigean, C.M.
3.8
X-RAY DIFFRACTION
0.283
0.247
false
true
IGHV1
IGKV5
Kappa
null
null
null
null
null
sabdab_dataset/3ogc/abangle/3ogc.abangle
sabdab_dataset/3ogc/annotation/3ogc_A_VH.ann
sabdab_dataset/3ogc/annotation/3ogc_B_VL.ann
sabdab_dataset/3ogc/imgt/3ogc_A_H.ann
sabdab_dataset/3ogc/imgt/3ogc_B_L.ann
sabdab_dataset/3ogc/sequence/3ogc_raw.pdb
sabdab_dataset/3ogc/sequence/3ogc_A_VH.fa
sabdab_dataset/3ogc/sequence/3ogc_B_VL.fa
sabdab_dataset/3ogc/structure/3ogc.pdb
sabdab_dataset/3ogc/structure/chothia/3ogc.pdb
false
false
train
3ogo
E
null
0
A
protein
null
green fluorescent protein
FLUORESCENT PROTEIN/IMMUNE SYSTEM
08/17/10
Structure of the GFP:GFP-nanobody complex at 2.8 A resolution in spacegroup P21212
AEQUOREA VICTORIA; CAMELUS DROMEDARIUS
camelus dromedarius
null
aequorea victoria
Kubala, M.H., Kovtun, O., Alexandrov, K., Collins, B.M.
2.8
X-RAY DIFFRACTION
0.253
0.202
false
true
IGHV1
null
null
0
-12.56
Other
37
20945358
null
sabdab_dataset/3ogo/annotation/3ogo_E_VH.ann
null
sabdab_dataset/3ogo/imgt/3ogo_E_H.ann
null
sabdab_dataset/3ogo/sequence/3ogo_raw.pdb
sabdab_dataset/3ogo/sequence/3ogo_E_VH.fa
null
sabdab_dataset/3ogo/structure/3ogo.pdb
sabdab_dataset/3ogo/structure/chothia/3ogo.pdb
false
false
train
3ogo
F
null
0
C
protein
null
green fluorescent protein
FLUORESCENT PROTEIN/IMMUNE SYSTEM
08/17/10
Structure of the GFP:GFP-nanobody complex at 2.8 A resolution in spacegroup P21212
AEQUOREA VICTORIA; CAMELUS DROMEDARIUS
camelus dromedarius
null
aequorea victoria
Kubala, M.H., Kovtun, O., Alexandrov, K., Collins, B.M.
2.8
X-RAY DIFFRACTION
0.253
0.202
false
true
IGHV1
null
null
0
-12.56
Other
37
20945358
null
sabdab_dataset/3ogo/annotation/3ogo_F_VH.ann
null
sabdab_dataset/3ogo/imgt/3ogo_F_H.ann
null
sabdab_dataset/3ogo/sequence/3ogo_raw.pdb
sabdab_dataset/3ogo/sequence/3ogo_F_VH.fa
null
sabdab_dataset/3ogo/structure/3ogo.pdb
sabdab_dataset/3ogo/structure/chothia/3ogo.pdb
false
false
train
3ogo
G
null
0
B
protein
null
green fluorescent protein
FLUORESCENT PROTEIN/IMMUNE SYSTEM
08/17/10
Structure of the GFP:GFP-nanobody complex at 2.8 A resolution in spacegroup P21212
AEQUOREA VICTORIA; CAMELUS DROMEDARIUS
camelus dromedarius
null
aequorea victoria
Kubala, M.H., Kovtun, O., Alexandrov, K., Collins, B.M.
2.8
X-RAY DIFFRACTION
0.253
0.202
false
true
IGHV1
null
null
0
-12.56
Other
37
20945358
null
sabdab_dataset/3ogo/annotation/3ogo_G_VH.ann
null
sabdab_dataset/3ogo/imgt/3ogo_G_H.ann
null
sabdab_dataset/3ogo/sequence/3ogo_raw.pdb
sabdab_dataset/3ogo/sequence/3ogo_G_VH.fa
null
sabdab_dataset/3ogo/structure/3ogo.pdb
sabdab_dataset/3ogo/structure/chothia/3ogo.pdb
false
false
train
3ogo
H
null
0
B
protein
null
green fluorescent protein
FLUORESCENT PROTEIN/IMMUNE SYSTEM
08/17/10
Structure of the GFP:GFP-nanobody complex at 2.8 A resolution in spacegroup P21212
AEQUOREA VICTORIA; CAMELUS DROMEDARIUS
camelus dromedarius
null
aequorea victoria
Kubala, M.H., Kovtun, O., Alexandrov, K., Collins, B.M.
2.8
X-RAY DIFFRACTION
0.253
0.202
false
true
IGHV1
null
null
0
-12.56
Other
37
20945358
null
sabdab_dataset/3ogo/annotation/3ogo_H_VH.ann
null
sabdab_dataset/3ogo/imgt/3ogo_H_H.ann
null
sabdab_dataset/3ogo/sequence/3ogo_raw.pdb
sabdab_dataset/3ogo/sequence/3ogo_H_VH.fa
null
sabdab_dataset/3ogo/structure/3ogo.pdb
sabdab_dataset/3ogo/structure/chothia/3ogo.pdb
false
false
train
3ojd
B
A
0
null
null
null
null
IMMUNE SYSTEM
08/22/10
Anti-Indolicidin monoclonal antibody V2D2 (Fab fragment)
MUS MUSCULUS
mus musculus
mus musculus
null
Lomash, S., Salunke, D.M.
2.0
X-RAY DIFFRACTION
0.236
0.205
false
false
IGHV9
IGKV12
Kappa
null
null
null
null
null
sabdab_dataset/3ojd/abangle/3ojd.abangle
sabdab_dataset/3ojd/annotation/3ojd_B_VH.ann
sabdab_dataset/3ojd/annotation/3ojd_A_VL.ann
sabdab_dataset/3ojd/imgt/3ojd_B_H.ann
sabdab_dataset/3ojd/imgt/3ojd_A_L.ann
sabdab_dataset/3ojd/sequence/3ojd_raw.pdb
sabdab_dataset/3ojd/sequence/3ojd_B_VH.fa
sabdab_dataset/3ojd/sequence/3ojd_A_VL.fa
sabdab_dataset/3ojd/structure/3ojd.pdb
sabdab_dataset/3ojd/structure/chothia/3ojd.pdb
true
false
train
3okd
B
A
0
null
null
null
null
IMMUNE SYSTEM
08/24/10
Crystal structure of S25-39 in complex with Kdo
MUS MUSCULUS
mus musculus
mus musculus
null
Blackler, R.J., Evans, S.V.
1.8
X-RAY DIFFRACTION
0.275
0.233
false
false
IGHV7
IGKV8
Kappa
null
null
null
null
null
sabdab_dataset/3okd/abangle/3okd.abangle
sabdab_dataset/3okd/annotation/3okd_B_VH.ann
sabdab_dataset/3okd/annotation/3okd_A_VL.ann
sabdab_dataset/3okd/imgt/3okd_B_H.ann
sabdab_dataset/3okd/imgt/3okd_A_L.ann
sabdab_dataset/3okd/sequence/3okd_raw.pdb
sabdab_dataset/3okd/sequence/3okd_B_VH.fa
sabdab_dataset/3okd/sequence/3okd_A_VL.fa
sabdab_dataset/3okd/structure/3okd.pdb
sabdab_dataset/3okd/structure/chothia/3okd.pdb
false
false
train
3oke
B
A
0
B
carbohydrate
KO2
PROP-2-EN-1-YL D-GLYCERO-ALPHA-D-TALO-OCT-2-ULOPYRANOSIDONIC ACID
IMMUNE SYSTEM
08/24/10
Crystal structure of S25-39 in complex with Ko
MUS MUSCULUS
mus musculus
mus musculus
mus musculus
Blackler, R.J., Evans, S.V.
2.4
X-RAY DIFFRACTION
0.289
0.221
false
false
IGHV7
IGKV8
Kappa
null
null
null
null
null
sabdab_dataset/3oke/abangle/3oke.abangle
sabdab_dataset/3oke/annotation/3oke_B_VH.ann
sabdab_dataset/3oke/annotation/3oke_A_VL.ann
sabdab_dataset/3oke/imgt/3oke_B_H.ann
sabdab_dataset/3oke/imgt/3oke_A_L.ann
sabdab_dataset/3oke/sequence/3oke_raw.pdb
sabdab_dataset/3oke/sequence/3oke_B_VH.fa
sabdab_dataset/3oke/sequence/3oke_A_VL.fa
sabdab_dataset/3oke/structure/3oke.pdb
sabdab_dataset/3oke/structure/chothia/3oke.pdb
false
false
train
3okk
B
A
0
B
carbohydrate
KDA
polysaccharide
IMMUNE SYSTEM
08/25/10
Crystal structure of S25-39 in complex with Kdo(2.4)Kdo
MUS MUSCULUS
mus musculus
mus musculus
mus musculus
Blackler, R.J., Evans, S.V.
1.95
X-RAY DIFFRACTION
0.234
0.195
false
false
IGHV7
IGKV8
Kappa
null
null
null
null
null
sabdab_dataset/3okk/abangle/3okk.abangle
sabdab_dataset/3okk/annotation/3okk_B_VH.ann
sabdab_dataset/3okk/annotation/3okk_A_VL.ann
sabdab_dataset/3okk/imgt/3okk_B_H.ann
sabdab_dataset/3okk/imgt/3okk_A_L.ann
sabdab_dataset/3okk/sequence/3okk_raw.pdb
sabdab_dataset/3okk/sequence/3okk_B_VH.fa
sabdab_dataset/3okk/sequence/3okk_A_VL.fa
sabdab_dataset/3okk/structure/3okk.pdb
sabdab_dataset/3okk/structure/chothia/3okk.pdb
false
false
train
3okl
B
A
0
B
carbohydrate
KDA
polysaccharide
IMMUNE SYSTEM
08/25/10
Crystal structure of S25-39 in complex with Kdo(2.8)Kdo
MUS MUSCULUS
mus musculus
mus musculus
mus musculus
Blackler, R.J., Evans, S.V.
1.8
X-RAY DIFFRACTION
0.240
0.191
false
false
IGHV7
IGKV8
Kappa
null
null
null
null
null
sabdab_dataset/3okl/abangle/3okl.abangle
sabdab_dataset/3okl/annotation/3okl_B_VH.ann
sabdab_dataset/3okl/annotation/3okl_A_VL.ann
sabdab_dataset/3okl/imgt/3okl_B_H.ann
sabdab_dataset/3okl/imgt/3okl_A_L.ann
sabdab_dataset/3okl/sequence/3okl_raw.pdb
sabdab_dataset/3okl/sequence/3okl_B_VH.fa
sabdab_dataset/3okl/sequence/3okl_A_VL.fa
sabdab_dataset/3okl/structure/3okl.pdb
sabdab_dataset/3okl/structure/chothia/3okl.pdb
false
false
train
3okm
B
A
0
null
null
null
null
IMMUNE SYSTEM
08/25/10
Crystal structure of unliganded S25-39
MUS MUSCULUS
mus musculus
mus musculus
null
Blackler, R.J., Evans, S.V.
2.4
X-RAY DIFFRACTION
0.306
0.229
false
false
IGHV7
IGKV8
Kappa
null
null
null
null
null
sabdab_dataset/3okm/abangle/3okm.abangle
sabdab_dataset/3okm/annotation/3okm_B_VH.ann
sabdab_dataset/3okm/annotation/3okm_A_VL.ann
sabdab_dataset/3okm/imgt/3okm_B_H.ann
sabdab_dataset/3okm/imgt/3okm_A_L.ann
sabdab_dataset/3okm/sequence/3okm_raw.pdb
sabdab_dataset/3okm/sequence/3okm_B_VH.fa
sabdab_dataset/3okm/sequence/3okm_A_VL.fa
sabdab_dataset/3okm/structure/3okm.pdb
sabdab_dataset/3okm/structure/chothia/3okm.pdb
false
false
train
3okn
B
A
0
A
carbohydrate
KDO
polysaccharide
IMMUNE SYSTEM
08/25/10
Crystal structure of S25-39 in complex with Kdo(2.4)Kdo(2.4)Kdo
MUS MUSCULUS
mus musculus
mus musculus
mus musculus
Blackler, R.J., Evans, S.V.
2.15
X-RAY DIFFRACTION
0.269
0.214
false
false
IGHV7
IGKV8
Kappa
null
null
null
null
null
sabdab_dataset/3okn/abangle/3okn.abangle
sabdab_dataset/3okn/annotation/3okn_B_VH.ann
sabdab_dataset/3okn/annotation/3okn_A_VL.ann
sabdab_dataset/3okn/imgt/3okn_B_H.ann
sabdab_dataset/3okn/imgt/3okn_A_L.ann
sabdab_dataset/3okn/sequence/3okn_raw.pdb
sabdab_dataset/3okn/sequence/3okn_B_VH.fa
sabdab_dataset/3okn/sequence/3okn_A_VL.fa
sabdab_dataset/3okn/structure/3okn.pdb
sabdab_dataset/3okn/structure/chothia/3okn.pdb
false
false
train
3oko
B
A
0
B
carbohydrate
KDA
polysaccharide
IMMUNE SYSTEM
08/25/10
Crystal structure of S25-39 in complex with Kdo(2.8)Kdo(2.4)Kdo
MUS MUSCULUS
mus musculus
mus musculus
mus musculus
Blackler, R.J., Evans, S.V.
2.45
X-RAY DIFFRACTION
0.267
0.210
false
false
IGHV7
IGKV8
Kappa
null
null
null
null
null
sabdab_dataset/3oko/abangle/3oko.abangle
sabdab_dataset/3oko/annotation/3oko_B_VH.ann
sabdab_dataset/3oko/annotation/3oko_A_VL.ann
sabdab_dataset/3oko/imgt/3oko_B_H.ann
sabdab_dataset/3oko/imgt/3oko_A_L.ann
sabdab_dataset/3oko/sequence/3oko_raw.pdb
sabdab_dataset/3oko/sequence/3oko_B_VH.fa
sabdab_dataset/3oko/sequence/3oko_A_VL.fa
sabdab_dataset/3oko/structure/3oko.pdb
sabdab_dataset/3oko/structure/chothia/3oko.pdb
false
false
train
3opz
H
L
0
A
protein
null
trans-sialidase
hydrolase/immune system
09/02/10
Crystal structure of trans-sialidase in complex with the Fab fragment of a neutralizing monoclonal IgG antibody
TRYPANOSOMA CRUZI; MUS MUSCULUS
mus musculus
mus musculus
trypanosoma cruzi
Larrieux, N., Muia, R., Campetella, O., Buschiazzo, A.
3.4
X-RAY DIFFRACTION
0.205
0.164
false
false
IGHV1
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/3opz/abangle/3opz.abangle
sabdab_dataset/3opz/annotation/3opz_H_VH.ann
sabdab_dataset/3opz/annotation/3opz_L_VL.ann
sabdab_dataset/3opz/imgt/3opz_H_H.ann
sabdab_dataset/3opz/imgt/3opz_L_L.ann
sabdab_dataset/3opz/sequence/3opz_raw.pdb
sabdab_dataset/3opz/sequence/3opz_H_VH.fa
sabdab_dataset/3opz/sequence/3opz_L_VL.fa
sabdab_dataset/3opz/structure/3opz.pdb
sabdab_dataset/3opz/structure/chothia/3opz.pdb
true
false
train
3opz
I
M
0
B
protein
null
trans-sialidase
hydrolase/immune system
09/02/10
Crystal structure of trans-sialidase in complex with the Fab fragment of a neutralizing monoclonal IgG antibody
TRYPANOSOMA CRUZI; MUS MUSCULUS
mus musculus
mus musculus
trypanosoma cruzi
Larrieux, N., Muia, R., Campetella, O., Buschiazzo, A.
3.4
X-RAY DIFFRACTION
0.205
0.164
false
false
IGHV1
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/3opz/abangle/3opz.abangle
sabdab_dataset/3opz/annotation/3opz_I_VH.ann
sabdab_dataset/3opz/annotation/3opz_M_VL.ann
sabdab_dataset/3opz/imgt/3opz_I_H.ann
sabdab_dataset/3opz/imgt/3opz_M_L.ann
sabdab_dataset/3opz/sequence/3opz_raw.pdb
sabdab_dataset/3opz/sequence/3opz_I_VH.fa
sabdab_dataset/3opz/sequence/3opz_M_VL.fa
sabdab_dataset/3opz/structure/3opz.pdb
sabdab_dataset/3opz/structure/chothia/3opz.pdb
true
false
test
3opz
J
N
0
C
protein
null
trans-sialidase
hydrolase/immune system
09/02/10
Crystal structure of trans-sialidase in complex with the Fab fragment of a neutralizing monoclonal IgG antibody
TRYPANOSOMA CRUZI; MUS MUSCULUS
mus musculus
mus musculus
trypanosoma cruzi
Larrieux, N., Muia, R., Campetella, O., Buschiazzo, A.
3.4
X-RAY DIFFRACTION
0.205
0.164
false
false
IGHV1
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/3opz/abangle/3opz.abangle
sabdab_dataset/3opz/annotation/3opz_J_VH.ann
sabdab_dataset/3opz/annotation/3opz_N_VL.ann
sabdab_dataset/3opz/imgt/3opz_J_H.ann
sabdab_dataset/3opz/imgt/3opz_N_L.ann
sabdab_dataset/3opz/sequence/3opz_raw.pdb
sabdab_dataset/3opz/sequence/3opz_J_VH.fa
sabdab_dataset/3opz/sequence/3opz_N_VL.fa
sabdab_dataset/3opz/structure/3opz.pdb
sabdab_dataset/3opz/structure/chothia/3opz.pdb
true
false
train
3or6
A
B
0
C
protein
null
voltage-gated potassium channel
IMMUNE SYSTEM/TRANSPORT PROTEIN
09/06/10
On the structural basis of modal gating behavior in K+channels - E71Q
MUS MUSCULUS; STREPTOMYCES LIVIDANS
mus musculus
mus musculus
streptomyces lividans
Chakrapani, S., Cordero-Morales, J.F., Jogini, V., Perozo, E.
2.7
X-RAY DIFFRACTION
0.268
0.226
false
false
IGHV1
IGKV5
Kappa
null
null
null
null
null
sabdab_dataset/3or6/abangle/3or6.abangle
sabdab_dataset/3or6/annotation/3or6_A_VH.ann
sabdab_dataset/3or6/annotation/3or6_B_VL.ann
sabdab_dataset/3or6/imgt/3or6_A_H.ann
sabdab_dataset/3or6/imgt/3or6_B_L.ann
sabdab_dataset/3or6/sequence/3or6_raw.pdb
sabdab_dataset/3or6/sequence/3or6_A_VH.fa
sabdab_dataset/3or6/sequence/3or6_B_VL.fa
sabdab_dataset/3or6/structure/3or6.pdb
sabdab_dataset/3or6/structure/chothia/3or6.pdb
false
false
train
3or7
A
B
0
C
protein
null
voltage-gated potassium channel
IMMUNE SYSTEM/TRANSPORT PROTEIN
09/06/10
On the structural basis of modal gating behavior in K+channels - E71I
MUS MUSCULUS; STREPTOMYCES LIVIDANS
mus musculus
mus musculus
streptomyces lividans
Chakrapani, S., Cordero-Morales, J.F., Jogini, V., Pan, A.C., Cortes, D.M., Roux, B., Perozo, E.
2.3
X-RAY DIFFRACTION
0.271
0.264
false
false
IGHV1
IGKV5
Kappa
null
null
null
null
null
sabdab_dataset/3or7/abangle/3or7.abangle
sabdab_dataset/3or7/annotation/3or7_A_VH.ann
sabdab_dataset/3or7/annotation/3or7_B_VL.ann
sabdab_dataset/3or7/imgt/3or7_A_H.ann
sabdab_dataset/3or7/imgt/3or7_B_L.ann
sabdab_dataset/3or7/sequence/3or7_raw.pdb
sabdab_dataset/3or7/sequence/3or7_A_VH.fa
sabdab_dataset/3or7/sequence/3or7_B_VL.fa
sabdab_dataset/3or7/structure/3or7.pdb
sabdab_dataset/3or7/structure/chothia/3or7.pdb
false
false
train
3oz9
H
L
0
null
null
null
null
IMMUNE SYSTEM
09/24/10
Crystal Structure of anti-gp41 Fab NC-1
MUS MUSCULUS
mus musculus
mus musculus
null
Stanfield, R.L., Calarese, D.A., Jiang, S., Wilson, I.A.
1.6
X-RAY DIFFRACTION
0.233
0.190
false
false
IGHV1
IGKV4
Kappa
null
null
null
null
null
sabdab_dataset/3oz9/abangle/3oz9.abangle
sabdab_dataset/3oz9/annotation/3oz9_H_VH.ann
sabdab_dataset/3oz9/annotation/3oz9_L_VL.ann
sabdab_dataset/3oz9/imgt/3oz9_H_H.ann
sabdab_dataset/3oz9/imgt/3oz9_L_L.ann
sabdab_dataset/3oz9/sequence/3oz9_raw.pdb
sabdab_dataset/3oz9/sequence/3oz9_H_VH.fa
sabdab_dataset/3oz9/sequence/3oz9_L_VL.fa
sabdab_dataset/3oz9/structure/3oz9.pdb
sabdab_dataset/3oz9/structure/chothia/3oz9.pdb
true
false
train
3p0g
B
null
0
A
protein
null
beta-2 adrenergic receptor, lysozyme
SIGNALING PROTEIN, Hydrolase
09/28/10
Structure of a nanobody-stabilized active state of the beta2 adrenoceptor
HOMO SAPIENS, ENTEROBACTERIA PHAGE T4; LAMA GLAMA
lama glama
null
homo sapiens, enterobacteria phage t4
Rasmussen, S.G.F., Choi, H.-J., Fung, J.J., Pardon, E., Casarosa, P., Chae, P.S., DeVree, B.T., Rosenbaum, D.M., Thian, F.S., Kobilka, T.S., Schnapp, A., Konetzki, I., Sunahara, R.K., Gellman, S.H., Pautsch, A., Steyaert, J., Weis, W.I., Kobilka, B.K.
3.5
X-RAY DIFFRACTION
0.308
0.235
false
true
IGHV1
null
null
0
-13.745742
Unknown
null
TBD
null
sabdab_dataset/3p0g/annotation/3p0g_B_VH.ann
null
sabdab_dataset/3p0g/imgt/3p0g_B_H.ann
null
sabdab_dataset/3p0g/sequence/3p0g_raw.pdb
sabdab_dataset/3p0g/sequence/3p0g_B_VH.fa
null
sabdab_dataset/3p0g/structure/3p0g.pdb
sabdab_dataset/3p0g/structure/chothia/3p0g.pdb
false
false
train
3p0v
H
L
0
null
null
null
null
IMMUNE SYSTEM
09/29/10
anti-EGFR/HER3 Fab DL11 alone
HOMO SAPIENS
homo sapiens
homo sapiens
null
Eigenbrot, C., Shia, S.
2.85
X-RAY DIFFRACTION
0.280
0.227
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3p0v/abangle/3p0v.abangle
sabdab_dataset/3p0v/annotation/3p0v_H_VH.ann
sabdab_dataset/3p0v/annotation/3p0v_L_VL.ann
sabdab_dataset/3p0v/imgt/3p0v_H_H.ann
sabdab_dataset/3p0v/imgt/3p0v_L_L.ann
sabdab_dataset/3p0v/sequence/3p0v_raw.pdb
sabdab_dataset/3p0v/sequence/3p0v_H_VH.fa
sabdab_dataset/3p0v/sequence/3p0v_L_VL.fa
sabdab_dataset/3p0v/structure/3p0v.pdb
sabdab_dataset/3p0v/structure/chothia/3p0v.pdb
false
false
train
3p0v
I
M
0
null
null
null
null
IMMUNE SYSTEM
09/29/10
anti-EGFR/HER3 Fab DL11 alone
HOMO SAPIENS
homo sapiens
homo sapiens
null
Eigenbrot, C., Shia, S.
2.85
X-RAY DIFFRACTION
0.280
0.227
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3p0v/abangle/3p0v.abangle
sabdab_dataset/3p0v/annotation/3p0v_I_VH.ann
sabdab_dataset/3p0v/annotation/3p0v_M_VL.ann
sabdab_dataset/3p0v/imgt/3p0v_I_H.ann
sabdab_dataset/3p0v/imgt/3p0v_M_L.ann
sabdab_dataset/3p0v/sequence/3p0v_raw.pdb
sabdab_dataset/3p0v/sequence/3p0v_I_VH.fa
sabdab_dataset/3p0v/sequence/3p0v_M_VL.fa
sabdab_dataset/3p0v/structure/3p0v.pdb
sabdab_dataset/3p0v/structure/chothia/3p0v.pdb
false
false
train
3p0y
H
L
0
A
protein
null
epidermal growth factor receptor
IMMUNE SYSTEM
09/29/10
anti-EGFR/HER3 Fab DL11 in complex with domain III of EGFR extracellular region
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Eigenbrot, C., Shia, S.
1.8
X-RAY DIFFRACTION
0.215
0.181
false
true
IGHV3
IGKV1
Kappa
0
-12.36
SPR
37
22014573
sabdab_dataset/3p0y/abangle/3p0y.abangle
sabdab_dataset/3p0y/annotation/3p0y_H_VH.ann
sabdab_dataset/3p0y/annotation/3p0y_L_VL.ann
sabdab_dataset/3p0y/imgt/3p0y_H_H.ann
sabdab_dataset/3p0y/imgt/3p0y_L_L.ann
sabdab_dataset/3p0y/sequence/3p0y_raw.pdb
sabdab_dataset/3p0y/sequence/3p0y_H_VH.fa
sabdab_dataset/3p0y/sequence/3p0y_L_VL.fa
sabdab_dataset/3p0y/structure/3p0y.pdb
sabdab_dataset/3p0y/structure/chothia/3p0y.pdb
true
false
train
3p11
H
L
0
A
protein
null
receptor tyrosine-protein kinase erbb-3
IMMUNE SYSTEM
09/29/10
anti-EGFR/HER3 Fab DL11 in complex with domains I-III of the HER3 extracellular region
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Eigenbrot, C., Shia, S.
3.7
X-RAY DIFFRACTION
0.323
0.245
false
true
IGHV3
IGKV1
Kappa
0
-12.19
SPR
37
22014573
sabdab_dataset/3p11/abangle/3p11.abangle
sabdab_dataset/3p11/annotation/3p11_H_VH.ann
sabdab_dataset/3p11/annotation/3p11_L_VL.ann
sabdab_dataset/3p11/imgt/3p11_H_H.ann
sabdab_dataset/3p11/imgt/3p11_L_L.ann
sabdab_dataset/3p11/sequence/3p11_raw.pdb
sabdab_dataset/3p11/sequence/3p11_H_VH.fa
sabdab_dataset/3p11/sequence/3p11_L_VL.fa
sabdab_dataset/3p11/structure/3p11.pdb
sabdab_dataset/3p11/structure/chothia/3p11.pdb
false
false
validation
3p30
H
L
0
A
protein
null
hiv-1 gp41
IMMUNE SYSTEM
10/04/10
crystal structure of the cluster II Fab 1281 in complex with HIV-1 gp41 ectodomain
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Frey, G., Chen, J., Rits-Volloch, S., Freeman, M.M., Zolla-Pazner, S., Chen, B.
3.3
X-RAY DIFFRACTION
0.289
0.261
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
sabdab_dataset/3p30/abangle/3p30.abangle
sabdab_dataset/3p30/annotation/3p30_H_VH.ann
sabdab_dataset/3p30/annotation/3p30_L_VL.ann
sabdab_dataset/3p30/imgt/3p30_H_H.ann
sabdab_dataset/3p30/imgt/3p30_L_L.ann
sabdab_dataset/3p30/sequence/3p30_raw.pdb
sabdab_dataset/3p30/sequence/3p30_H_VH.fa
sabdab_dataset/3p30/sequence/3p30_L_VL.fa
sabdab_dataset/3p30/structure/3p30.pdb
sabdab_dataset/3p30/structure/chothia/3p30.pdb
true
false
train
3p9w
B
null
0
A
protein
null
vascular endothelial growth factor a
SIGNALING PROTEIN/IMMUNE SYSTEM
10/18/10
Crystal structure of an engineered human autonomous VH Domain in complex with VEGF
HOMO SAPIENS
homo sapiens
null
homo sapiens
Ma, X., Wiesmann, C.
2.41
X-RAY DIFFRACTION
0.233
0.193
false
true
IGHV3
null
null
0
-10.635483
SPR
null
TBD
null
sabdab_dataset/3p9w/annotation/3p9w_B_VH.ann
null
sabdab_dataset/3p9w/imgt/3p9w_B_H.ann
null
sabdab_dataset/3p9w/sequence/3p9w_raw.pdb
sabdab_dataset/3p9w/sequence/3p9w_B_VH.fa
null
sabdab_dataset/3p9w/structure/3p9w.pdb
sabdab_dataset/3p9w/structure/chothia/3p9w.pdb
true
true
train
3p9w
D
null
0
C
protein
null
vascular endothelial growth factor a
SIGNALING PROTEIN/IMMUNE SYSTEM
10/18/10
Crystal structure of an engineered human autonomous VH Domain in complex with VEGF
HOMO SAPIENS
homo sapiens
null
homo sapiens
Ma, X., Wiesmann, C.
2.41
X-RAY DIFFRACTION
0.233
0.193
false
true
IGHV3
null
null
0
-10.635483
SPR
null
TBD
null
sabdab_dataset/3p9w/annotation/3p9w_D_VH.ann
null
sabdab_dataset/3p9w/imgt/3p9w_D_H.ann
null
sabdab_dataset/3p9w/sequence/3p9w_raw.pdb
sabdab_dataset/3p9w/sequence/3p9w_D_VH.fa
null
sabdab_dataset/3p9w/structure/3p9w.pdb
sabdab_dataset/3p9w/structure/chothia/3p9w.pdb
true
false
train
3p9w
F
null
0
E
protein
null
vascular endothelial growth factor a
SIGNALING PROTEIN/IMMUNE SYSTEM
10/18/10
Crystal structure of an engineered human autonomous VH Domain in complex with VEGF
HOMO SAPIENS
homo sapiens
null
homo sapiens
Ma, X., Wiesmann, C.
2.41
X-RAY DIFFRACTION
0.233
0.193
false
true
IGHV3
null
null
0
-10.635483
SPR
null
TBD
null
sabdab_dataset/3p9w/annotation/3p9w_F_VH.ann
null
sabdab_dataset/3p9w/imgt/3p9w_F_H.ann
null
sabdab_dataset/3p9w/sequence/3p9w_raw.pdb
sabdab_dataset/3p9w/sequence/3p9w_F_VH.fa
null
sabdab_dataset/3p9w/structure/3p9w.pdb
sabdab_dataset/3p9w/structure/chothia/3p9w.pdb
true
false
train
3p9w
H
null
0
G
protein
null
vascular endothelial growth factor a
SIGNALING PROTEIN/IMMUNE SYSTEM
10/18/10
Crystal structure of an engineered human autonomous VH Domain in complex with VEGF
HOMO SAPIENS
homo sapiens
null
homo sapiens
Ma, X., Wiesmann, C.
2.41
X-RAY DIFFRACTION
0.233
0.193
false
true
IGHV3
null
null
0
-10.635483
SPR
null
TBD
null
sabdab_dataset/3p9w/annotation/3p9w_H_VH.ann
null
sabdab_dataset/3p9w/imgt/3p9w_H_H.ann
null
sabdab_dataset/3p9w/sequence/3p9w_raw.pdb
sabdab_dataset/3p9w/sequence/3p9w_H_VH.fa
null
sabdab_dataset/3p9w/structure/3p9w.pdb
sabdab_dataset/3p9w/structure/chothia/3p9w.pdb
true
false
train
3pgf
H
L
0
A
protein
null
maltose-binding periplasmic protein
MALTODEXTRIN BINDING PROTEIN/DE NOVO PROTEIN
11/01/10
Crystal structure of maltose bound MBP with a conformationally specific synthetic antigen binder (sAB)
ESCHERICHIA COLI; HOMO SAPIENS
homo sapiens
homo sapiens
escherichia coli
Kossiakoff, A.A., Duguid, E.M., Sandstrom, A.
2.1
X-RAY DIFFRACTION
0.227
0.177
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
sabdab_dataset/3pgf/abangle/3pgf.abangle
sabdab_dataset/3pgf/annotation/3pgf_H_VH.ann
sabdab_dataset/3pgf/annotation/3pgf_L_VL.ann
sabdab_dataset/3pgf/imgt/3pgf_H_H.ann
sabdab_dataset/3pgf/imgt/3pgf_L_L.ann
sabdab_dataset/3pgf/sequence/3pgf_raw.pdb
sabdab_dataset/3pgf/sequence/3pgf_H_VH.fa
sabdab_dataset/3pgf/sequence/3pgf_L_VL.fa
sabdab_dataset/3pgf/structure/3pgf.pdb
sabdab_dataset/3pgf/structure/chothia/3pgf.pdb
false
false
train
3pho
B
A
0
A
Hapten
KD1
3-DEOXY-ALPHA-D-MANNO-OCT-2-ULOPYRANONOSYL-(2->8)-3-DEOXY-ALPHA-D-MANNO-OCT-2-ULOPYRANONOSYL-(2->4)-3-DEOXY-ALPHA-D-MANNO-OCT-2-ULOPYRANONOSYL-(2->6)-2-AMINO-2-DEOXY-4-O-PHOSPHONO-BETA-D-GLUCOPYRANOSE
CARBOHYDRATE-BINDING PROTEIN
11/04/10
Crystal structure of S64-4 in complex with PSBP
MUS MUSCULUS
mus musculus
mus musculus
mus musculus
Evans, D.W., Evans, S.V.
2.6
X-RAY DIFFRACTION
0.275
0.219
false
false
IGHV7
IGKV3
Kappa
null
null
null
null
null
sabdab_dataset/3pho/abangle/3pho.abangle
sabdab_dataset/3pho/annotation/3pho_B_VH.ann
sabdab_dataset/3pho/annotation/3pho_A_VL.ann
sabdab_dataset/3pho/imgt/3pho_B_H.ann
sabdab_dataset/3pho/imgt/3pho_A_L.ann
sabdab_dataset/3pho/sequence/3pho_raw.pdb
sabdab_dataset/3pho/sequence/3pho_B_VH.fa
sabdab_dataset/3pho/sequence/3pho_A_VL.fa
sabdab_dataset/3pho/structure/3pho.pdb
sabdab_dataset/3pho/structure/chothia/3pho.pdb
false
false
train