pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
6vrq | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 02/08/20 | Crystal structure of gl12A21 Fab in complex with anti-idiotypic iv12 Fab | MUS MUSCULUS; HOMO SAPIENS | homo sapiens | homo sapiens | null | Aljedani, S.S., Weidle, C., Pancera, M. | 2.57 | X-RAY DIFFRACTION | 0.241 | 0.189 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
1zmy | A | null | 0 | L | protein | null | lysozyme c | IMMUNE SYSTEM/HYDROLASE | 05/11/05 | cAbBCII-10 VHH framework with CDR loops of cAbLys3 grafted on it and in complex with hen egg white lysozyme | CAMELUS DROMEDARIUS; GALLUS GALLUS | camelus dromedarius | null | gallus gallus | Saerens, D., Pellis, M., Loris, R., Pardon, E., Dumoulin, M., Matagne, A., Wyns, L., Muyldermans, S., Conrath, K. | 3.0 | X-RAY DIFFRACTION | 0.254 | 0.206 | false | true | IGHV1 | null | null | 0 | -9.93 | SPR | null | 16095608 |
5tsj | 1 | null | 0 | J | H | protein | protein | NA | NA | v-type atpase subunit g | v-type atp synthase subunit e | membrane protein, hydrolase | 10/29/16 | Thermus thermophilus V/A-ATPase bound to VH dAbs | HOMO SAPIENS; THERMUS THERMOPHILUS (STRAIN HB8 / ATCC 27634 / DSM 579) | homo sapiens | null | thermus thermophilus (strain hb8 / atcc 27634 /dsm 579) | thermus thermophilus (strain hb8 / atcc 27634 /dsm 579) | Davies, R.B., Smits, C., Wong, A.S.W., Stock, D., Sandin, S., Stewart, A.G. | 8.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
7rm0 | E | F | 0 | R | peptide | null | peptide from circumsporozoite protein variant vk247 | ANTIMICROBIAL PROTEIN | 07/26/21 | Antibody 2E10.E9 in complex with P. vivax CSP peptide ANGAGNQPGANGAGNQPG | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | plasmodium vivax | Kucharska, I., Ivanochko, D., Julien, J.P. | 2.71 | X-RAY DIFFRACTION | 0.246 | 0.209 | false | true | IGHV9 | IGKV8 | Kappa | null | null | null | null | null |
2fr4 | H | L | 0 | N | nucleic-acid | null | 5'-d(*cp*tp*gp*cp*cp*tp*tp*cp*ap*g)-3' | IMMUNE SYSTEM/DNA | 01/18/06 | Structure of Fab DNA-1 complexed with a stem-loop DNA ligand | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | null | Tanner, J.J., Ou, Z. | 1.95 | X-RAY DIFFRACTION | 0.256 | 0.207 | false | true | IGHV1 | IGKV12 | Kappa | 0.000004 | -7.364108 | Unknown | null | TBD |
7cvy | D | E | 0 | B | protein | null | e2 glycoprotein | IMMUNE SYSTEM/VIRUS | 08/27/20 | Cryo-EM structure of Chikungunya virus in complex with Fab fragments of mAb CHK-124 | MUS MUSCULUS; CHIKUNGUNYA VIRUS | mus musculus | mus musculus | chikungunya virus | Zhou, Q.F., Fox, J.M., Earnest, J.T., Ng, T.S., Kim, A.S., Fibriansah, G., Kostyuchenko, V.A., Shu, B., Diamond, M.S., Lok, S.M. | 5.2 | ELECTRON MICROSCOPY | null | null | false | false | IGHV6 | IGKV6 | Kappa | null | null | null | null | null |
4y5x | A | B | 0 | C | protein | null | erythropoietin receptor | protein binding/immune system | 02/12/15 | Diabody 305 complex with EpoR | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Moraga, I., Guo, F., Ozkan, E., Jude, K.M., Garcia, K.C. | 3.15 | X-RAY DIFFRACTION | 0.241 | 0.201 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
7zmv | E | null | 0 | D | protein | null | atp-dependent dna helicase q5 | HYDROLASE | 04/19/22 | Crystal structure of human RECQL5 helicase APO form in complex with engineered nanobody (Gluebody) G5-006 | Homo sapiens; Lama glama | lama glama | null | homo sapiens | Ye, M., Makola, M., Newman, J.A., Fairhead, M., MacLean, E., Krojer, T., Aitkenhead, H., Bountra, C., Gileadi, O., von Delft, F. | 2.002 | X-RAY DIFFRACTION | 0.275 | 0.242 | false | true | IGHV1 | null | null | null | null | null | null | null |
3lrs | E | F | 0 | F | carbohydrate | NAG | N-ACETYL-D-GLUCOSAMINE | IMMUNE SYSTEM | 02/11/10 | Structure of PG16, an antibody with broad and potent neutralization of HIV-1 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Pancera, M., Kwong, P.D. | 2.37 | X-RAY DIFFRACTION | 0.260 | 0.211 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
6uye | H | K | 0 | B | protein | null | sgp | VIRAL PROTEIN/IMMUNE SYSTEM | 11/13/19 | EBOV GPdMuc Makona bound to rEBOV-548 Fab | EBOLA VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | ebola virus | Murin, C.D., Ward, A.B. | 3.96 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5f6h | O | P | 0 | null | null | null | null | IMMUNE SYSTEM | 12/06/15 | Crystal Structure of Tier 2 Neutralizing Antibody DH427 from a Rhesus Macaque | HOMO SAPIENS | homo sapiens | homo sapiens | null | Fera, D., Harrison, S.C. | 2.66 | X-RAY DIFFRACTION | 0.262 | 0.230 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
4ttd | H | L | 0 | A | protein | null | lysozyme c | IMMUNE SYSTEM | 06/20/14 | Structure of a lysozyme antibody complex | HOMO SAPIENS; GALLUS GALLUS | homo sapiens | homo sapiens | gallus gallus | Wensley, B. | 2.15 | X-RAY DIFFRACTION | 0.279 | 0.255 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
7mmn | M | G | 0 | K | protein | null | fusion glycoprotein f1,fibritin | IMMUNE SYSTEM/VIRAL PROTEIN | 04/29/21 | Crystal Structure of the Prefusion RSV F Glycoprotein bound by human antibody AM14 | HOMO SAPIENS; HUMAN RESPIRATORY SYNCYTIAL VIRUS; ENTEROBACTERIA PHAGE T4 | homo sapiens | homo sapiens | human respiratory syncytial virus,enterobacteria phage t4 | Harshbarger, W., Malito, E. | 3.57 | X-RAY DIFFRACTION | 0.245 | 0.202 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5dd6 | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 08/24/15 | Crystal structures in an anti-HIV antibody lineage from immunization of Rhesus macaques | MACACA MULATTA | macaca mulatta | macaca mulatta | null | Nicely, N.I., Pemble IV, C.W., Haynes, B.F. | 1.699 | X-RAY DIFFRACTION | 0.224 | 0.191 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
6z06 | H | L | 0 | A | protein | null | envelope polyprotein | VIRAL PROTEIN | 05/07/20 | Crystal structure of Puumala virus Gc in complex with Fab 4G2 | MYODES GLAREOLUS; PUUMALA ORTHOHANTAVIRUS | myodes glareolus | myodes glareolus | puumala orthohantavirus | Rissanen, I.R., Stass, R., Krumm, S.A., Seow, J., Hulswit, R.J.G., Paesen, G.C., Hepojoki, J., Vapalahti, O., Lundkvist, A., Reynard, O., Volchkov, V., Doores, K.J., Huiskonen, J.T., Bowden, T.A. | 3.5 | X-RAY DIFFRACTION | 0.264 | 0.217 | false | true | IGHV5 | unknown | unknown | null | null | null | null | null |
3pnw | N | M | 0 | O | protein | null | tudor domain-containing protein 3 | PROTEIN BINDING/IMMUNE SYSTEM | 11/19/10 | Crystal Structure of the tudor domain of human TDRD3 in complex with an anti-TDRD3 FAB | HOMO SAPIENS, SYNTHETIC CONSTRUCT; HOMO SAPIENS | synthetic | synthetic | homo sapiens | Loppnau, P., Tempel, W., Wernimont, A.K., Lam, R., Ravichandran, M., Adams-Cioaba, M.A., Persson, H., Sidhu, S.S., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Cossar, D., Structural Genomics Consortium (SGC) | 2.05 | X-RAY DIFFRACTION | 0.264 | 0.223 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6vbg | C | null | 0 | A | protein | null | galactoside permease | PROTEIN TRANSPORT | 12/18/19 | Lactose permease complex with thiodigalactoside and nanobody 9043 | ESCHERICHIA COLI; LAMA GLAMA | lama glama | null | escherichia coli | Kumar, H., Stroud, R.M., Kaback, H.R., Finer-Moore, J., Smirnova, I., Kasho, V., Pardon, E., Steyart, J. | 2.8 | X-RAY DIFFRACTION | 0.275 | 0.239 | false | true | IGHV1 | null | null | null | null | null | null | null |
7lu9 | m | n | 0 | I | carbohydrate | MAN | ALPHA-D-MANNOSE | VIRAL PROTEIN/IMMUNE SYSTEM | 02/21/21 | Cryo-EM structure of DH851.3 bound to HIV-1 CH505 Env | MACACA MULATTA; HUMAN IMMUNODEFICIENCY VIRUS 1 | macaca mulatta | macaca mulatta | null | Manne, K., Edwards, R.J., Acharya, P. | 5.6 | ELECTRON MICROSCOPY | null | null | false | false | IGHV2 | IGLV2 | Lambda | null | null | null | null | null |
7s13 | I | M | 0 | C | protein | null | t-cell surface protein tactile | IMMUNE SYSTEM | 08/31/21 | Crystal structure of Fab in complex with mouse CD96 dimer | RATTUS; MUS MUSCULUS | rattus | rattus | mus musculus | Lee, P.S., Barman, I., Strop, P. | 2.12 | X-RAY DIFFRACTION | 0.265 | 0.217 | false | true | IGHV2 | IGLV3 | Lambda | null | null | null | null | null |
6bzw | A | B | 0 | J | peptide | null | e2 as412 peptide | IMMUNE SYSTEM | 12/26/17 | Structure of the Hepatitis C virus envelope glycoprotein E2 antigenic region 412-423 bound to the GL precursor of the broadly neutralizing antibody AP33 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | hepatitis c virus | Tzarum, N., Alemn, F., Wilson, I.A., Law, M. | 2.2 | X-RAY DIFFRACTION | 0.231 | 0.192 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
7lrt | F | G | 0 | B | protein | null | sars-cov-2 spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 02/17/21 | Cryo-EM structure of SARS-CoV-2 spike in complex with neutralizing antibody A23-58.1 that targets the receptor-binding domain | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, T., Tsybovsky, T. | 3.54 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
3oko | B | A | 0 | B | carbohydrate | KDA | polysaccharide | IMMUNE SYSTEM | 08/25/10 | Crystal structure of S25-39 in complex with Kdo(2.8)Kdo(2.4)Kdo | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Blackler, R.J., Evans, S.V. | 2.45 | X-RAY DIFFRACTION | 0.267 | 0.210 | false | false | IGHV7 | IGKV8 | Kappa | null | null | null | null | null |
6eyo | H | L | 0 | A | protein | null | immunoglobulin heavy constant epsilon | IMMUNE SYSTEM | 11/13/17 | Structure of extended IgE-Fc in complex with two anti-IgE Fabs | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Chen, J.B., Ramadani, F., Pang, M.O.Y., Beavil, R.L., Holdom, M.D., Mitropoulou, A.N., Beavil, A.J., Gould, H.J., Chang, T.W., Sutton, B.J., McDonnell, J.M., Davies, A.M. | 3.7 | X-RAY DIFFRACTION | 0.288 | 0.247 | false | true | IGHV1 | IGKV3 | Kappa | 0 | -14.596007 | SPR | null | TBD |
1mf2 | H | L | 0 | null | null | null | null | IMMUNOGLOBULIN | 12/27/96 | ANTI HIV1 PROTEASE FAB COMPLEX | MUS MUSCULUS | mus musculus | mus musculus | null | Lescar, J., Bentley, G.A. | 2.6 | X-RAY DIFFRACTION | 0.307 | 0.206 | false | false | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
7sg5 | H | L | 0 | A | peptide | null | pfcsp peptide 21 | IMMUNE SYSTEM | 10/05/21 | Structure of PfCSP peptide 21 with antibody CIS43_Var2 | Homo sapiens; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | synthetic construct | Tripathi, P., Kwong, P.D. | 1.4 | X-RAY DIFFRACTION | 0.218 | 0.185 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
5mv4 | L | M | 0 | N | peptide | null | synthetic peptide containing the citrullinated collagentype ii epitope cii616-639,collagen alpha-1(ii) chain,synthetic peptide containing the citrullinated collagen type ii epitope cii616- 639 | IMMUNE SYSTEM | 01/15/17 | ACC1 Fab fragment in complex with citrullinated CII616-639 epitope of collagen type II (ptm23) | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | mus musculus | Dobritzsch, D., Holmdahl, R., Ge, C. | 2.9 | X-RAY DIFFRACTION | 0.247 | 0.232 | false | false | IGHV6 | IGKV3 | Kappa | null | null | null | null | null |
7o30 | B | A | 0 | Q | peptide | null | pas#1 epitope peptide | IMMUNE SYSTEM | 04/01/21 | Crystal structure of the anti-PAS Fab 1.1 in complex with its epitope peptide | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | synthetic construct | Schilz, J., Schiefner, A., Skerra, A. | 2.65 | X-RAY DIFFRACTION | 0.269 | 0.220 | false | true | IGHV2 | IGKV3 | Kappa | null | null | null | null | null |
1rjc | A | null | 0 | B | protein | null | lysozyme c | IMMUNE SYSTEM/HYDROLASE | 11/19/03 | Crystal structure of the camelid single domain antibody cAb-Lys2 in complex with hen egg white lysozyme | CAMELUS DROMEDARIUS; GALLUS GALLUS | camelus dromedarius | null | gallus gallus | De Genst, E., Silence, K., Ghahroudi, M.A., Decanniere, K., Loris, R., Kinne, J., Wyns, L., Muyldermans, S. | 1.4 | X-RAY DIFFRACTION | 0.235 | 0.220 | false | true | IGHV1 | null | null | null | null | null | null | null |
3ifp | H | L | 0 | P | peptide | null | amyloid beta a4 protein | IMMUNE SYSTEM | 07/24/09 | X-ray structure of amyloid beta peptide:antibody (Abeta1-7:12B4) complex | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Weis, W.I., Feinberg, H., Basi, G.S., Schenk, D. | 2.95 | X-RAY DIFFRACTION | 0.269 | 0.235 | false | true | IGHV8 | IGKV1 | Kappa | 0 | -10.38 | SPR | 25 | 19923222 |
6w4m | H | L | 0 | G | N | protein | peptide | NA | NA | clade a/e 93th057 hiv-1 gp120 core | m48u1 cd4 mimetic peptide | VIRAL PROTEIN/IMMUNE SYSTEM | 03/11/20 | CRYSTAL STRUCTURE OF THE ADCC-POTENT, WEAKLY NEUTRALIZING HIV ENV CO-RECEPTOR BINDING SITE ANTIBODY N12-I2 FAB IN COMPLEX WITH HIV-1 CLADE A/E GP120 AND M48U1 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | synthetic construct | Tolbert, W.D., Gohain, N., Pazgier, M. | 3.2 | X-RAY DIFFRACTION | 0.301 | 0.241 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
2f5b | H | L | 0 | P | peptide | null | protein (gp41 epitope) | IMMUNOGLOBULIN | 04/09/99 | CRYSTAL STRUCTURE OF FAB' FROM THE HIV-1 NEUTRALIZING ANTIBODY 2F5 IN COMPLEX WITH ITS GP41 EPITOPE | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | null | Bryson, S., Julien, J.P., Hynes, R.C., Pai, E.F. | 2.0 | X-RAY DIFFRACTION | 0.258 | 0.232 | false | false | IGHV2 | IGKV1 | Kappa | null | null | null | null | null |
7mlv | F | null | 0 | D | protein | null | glycine receptor alpha 1 | MEMBRANE PROTEIN, SIGNALING PROTEIN | 04/29/21 | Cryo-EM reveals partially and fully assembled native glycine receptors,homomeric tetramer | RATTUS NORVEGICUS; SUS SCROFA | rattus norvegicus | null | sus scrofa | Zhu, H., Gouaux, E. | 4.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
2hfg | H | L | 0 | R | peptide | null | tumor necrosis factor receptor superfamily member 13c | IMMUNE SYSTEM | 06/23/06 | Crystal structure of hBR3 bound to CB3s-Fab | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Hymowitz, S.G. | 2.61 | X-RAY DIFFRACTION | 0.252 | 0.195 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -12.57 | SPR | 25 | 16840730 |
5u3o | H | L | 0 | A | peptide | null | gp41 mper peptide | IMMUNE SYSTEM/VIRAL PROTEIN | 12/02/16 | Crystal Structure of DH511.2_K3 Fab in Complex with HIV-1 gp41 MPER Peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Ofek, G., Wu, L., Lougheed, C.S., Williams, L.D., Nicely, N.I., Haynes, B.F. | 1.761 | X-RAY DIFFRACTION | 0.192 | 0.161 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7swd | H | h | 0 | D | E | protein | protein | NA | NA | virion spike glycoprotein | small/secreted glycoprotein | VIRAL PROTEIN/Immune System | 11/19/21 | Structure of EBOV GP lacking the mucin-like domain with 1C11 scFv and 1C3 Fab bound | ZAIRE EBOLAVIRUS (STRAIN GABON-94); ZAIRE EBOLAVIRUS; HOMO SAPIENS | homo sapiens | null | zaire ebolavirus | zaire ebolavirus (strain gabon-94) | Milligan, J.C., Yu, X., Saphire, E.O. | 3.59 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
1mci | null | B | 0 | P | peptide | null | peptide n-acetyl-d-phe-l-his-d-pro-oh | IMMUNE SYSTEM | 02/25/93 | PRINCIPLES AND PITFALLS IN DESIGNING SITE DIRECTED PEPTIDE LIGANDS | HOMO SAPIENS | null | homo sapiens | null | Edmundson, A.B., Harris, D.L., Fan, Z.-C., Guddat, L.W. | 2.7 | X-RAY DIFFRACTION | unknown | 0.177 | false | true | null | IGLV2 | Lambda | null | null | null | null | null |
4x7e | C | null | 0 | A | protein | null | capsid protein | VIRAL PROTEIN | 12/09/14 | Crystal structure of norovirus GII.10 P domain in complex with Nano-85 | NORWALK VIRUS; VICUGNA PACOS | vicugna pacos | null | norwalk virus | Hansman, G.H., Koromyslova, A.D. | 2.11 | X-RAY DIFFRACTION | 0.218 | 0.189 | false | true | IGHV1 | null | null | 0 | -11.125277 | ITC | null | TBD |
5jmr | B | null | 0 | null | null | null | null | IMMUNE SYSTEM | 04/29/16 | X-ray structure of an camelid VHH fragment | CAMELUS DROMEDARIUS | camelus dromedarius | null | null | Dahms, S.O., Than, M.E. | 2.27 | X-RAY DIFFRACTION | 0.216 | 0.190 | false | true | IGHV3 | null | null | null | null | null | null | null |
7zmp | C | null | 0 | A | protein | null | atp-dependent dna helicase q5 | HYDROLASE | 04/19/22 | Crystal structure of human RECQL5 helicase APO form in complex with engineered nanobody (Gluebody) G3-055 | Homo sapiens; Lama glama | lama glama | null | homo sapiens | Ye, M., Makola, M., Newman, J.A., Fairhead, M., MacLean, E., Krojer, T., Aitkenhead, H., Bountra, C., Gileadi, O., von Delft, F. | 3.626 | X-RAY DIFFRACTION | 0.359 | 0.332 | false | true | IGHV1 | null | null | null | null | null | null | null |
6q0i | H | L | 0 | A | protein | null | hemagglutinin | IMMUNE SYSTEM | 08/01/19 | Inferred intermediate I-7 (I-7-6) of the human antibody lineage 652 in complex with influenza hemagglutinin head domain of A/Beijing/262/95(H1N1) | INFLUENZA A VIRUS (A/BEIJING/262/1995(H1N1)); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus (a/beijing/262/1995(h1n1)) | McCarthy, K.R., Harrison, S.C. | 2.702 | X-RAY DIFFRACTION | 0.255 | 0.213 | false | true | IGHV4 | IGLV3 | Lambda | null | null | null | null | null |
3qa3 | D | C | 0 | G | protein | null | integrin alpha-m | IMMUNE SYSTEM/ cell adhesion | 01/10/11 | Crystal Structure of A-domain in complex with antibody | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Mahalingam, B., Xiong, J.P., Arnaout, M.A. | 3.0 | X-RAY DIFFRACTION | 0.224 | 0.194 | false | false | IGHV14 | IGKV8 | Kappa | null | null | null | null | null |
5n0a | I | M | 0 | B | protein | null | envelope glycoprotein e | Immune System/Viral protein | 02/02/17 | Crystal structure of A259C covalently linked dengue 2 virus envelope glycoprotein dimer in complex with the Fab fragment of the broadly neutralizing human antibody EDE2 A11 | HOMO SAPIENS; DENGUE VIRUS 2 | homo sapiens | homo sapiens | dengue virus 2 | Vaney, M.C., Rouvinski, A., Guardado-Calvo, P., Sharma, A., Rey, F.A. | 3.9 | X-RAY DIFFRACTION | 0.300 | 0.285 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
6tnp | B | A | 0 | H | unknown | NO8 | unknown | IMMUNE SYSTEM | 12/09/19 | Crystal structure of the ScFv-5E5 in complex with a Tn glycopeptide | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Macias-Leon, J., Corzana, F., Hurtado-Guerrero, R. | 3.0 | X-RAY DIFFRACTION | 0.251 | 0.203 | false | true | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
3k1k | D | null | 0 | B | protein | null | green fluorescent protein | LUMINESCENT PROTEIN/IMMUNE SYSTEM | 09/28/09 | Green fluorescent protein bound to minimizer nanobody | AEQUOREA VICTORIA; CAMELUS DROMEDARIUS | lama pacos | null | aequorea victoria | Kirchhofer, A., Helma, J., Schmidthals, K., Frauer, C., Cui, S., Karcher, A., Pellis, M., Muyldermans, S., Delucci, C.C., Cardoso, M.C., Leonhardt, H., Hopfner, K.-P., Rothbauer, U. | 2.15 | X-RAY DIFFRACTION | 0.255 | 0.212 | false | true | IGHV1 | null | null | null | null | null | null | null |
1i7z | B | A | 0 | A | Hapten | COC | COCAINE | IMMUNE SYSTEM | 03/12/01 | ANTIBODY GNC92H2 BOUND TO LIGAND | MUS MUSCULUS, HOMO SAPIENS | mus musculus, homo sapiens | mus musculus, homo sapiens | mus musculus, homo sapiens | Larsen, N.A., Wilson, I.A. | 2.3 | X-RAY DIFFRACTION | 0.265 | 0.220 | false | true | IGHV9 | IGKV3 | Kappa | 0 | -8.728352 | Unknown | null | TBD |
7zf9 | A | B | 0 | C | protein | null | spike protein s1 | VIRAL PROTEIN | 04/01/22 | SARS-CoV-2 Omicron BA.2 RBD in complex with COVOX-150 Fab (P21) | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Huo, J., Ren, J., Stuart, D.I. | 3.25 | X-RAY DIFFRACTION | 0.265 | 0.222 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5veb | H | L | 0 | Y | protein | null | cadherin-6 | IMMUNE SYSTEM | 04/04/17 | Crystal structure of a Fab binding to extracellular domain 5 of Cadherin-6 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Zhu, X., Bialucha, C.U., London, A., Clark, K., Hu, T. | 2.34 | X-RAY DIFFRACTION | 0.252 | 0.212 | false | false | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7p60 | H | null | 0 | D | protein | null | volume-regulated anion channel subunit lrrc8a | MEMBRANE PROTEIN | 07/15/21 | Structure of homomeric LRRC8A Volume-Regulated Anion Channel in complex with synthetic nanobody Sb4 at 1:0.5 ratio | MUS MUSCULUS; SYNTHETIC CONSTRUCT | synthetic construct | null | mus musculus | Deneka, D., Rutz, S., Sawicka, M. | 3.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7e3k | F | G | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN | 02/09/21 | Ultrapotent SARS-CoV-2 neutralizing antibodies with protective efficacy against newly emerged mutational variants | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Guo, H., Li, T., Liu, F., Gao, Y., Ji, X., Yang, H. | 3.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
1mcw | null | M | 0 | null | null | null | null | IMMUNOGLOBULIN | 05/09/89 | THREE-DIMENSIONAL STRUCTURE OF A HYBRID LIGHT CHAIN DIMER. PROTEIN ENGINEERING OF A BINDING CAVITY | HOMO SAPIENS | null | homo sapiens | null | Ely, K.R., Herron, J.N., Edmundson, A.B. | 3.5 | X-RAY DIFFRACTION | unknown | unknown | false | false | null | IGLV2 | Lambda | null | null | null | null | null |
5f93 | D | null | 0 | B | protein | null | adhesin binding fucosylated histo-blood group antigen,adhesin,adhesin binding fucosylated histo-blood group antigen | CELL ADHESION | 12/09/15 | Blood group antigen binding adhesin BabA of Helicobacter pylori strain A730 in complex with blood group H Lewis b hexasaccharide | HELICOBACTER PYLORI; LAMA GLAMA | lama glama | null | helicobacter pylori | Moonens, K., Gideonsson, P., Subedi, S., Romao, E., Oscarson, S., Muyldermans, S., Boren, T., Remaut, H. | 2.99 | X-RAY DIFFRACTION | 0.234 | 0.181 | false | true | IGHV1 | null | null | null | null | null | null | null |
6cse | A | B | 0 | C | protein | null | sodium/alanine symporter agcs | MEMBRANE PROTEIN | 03/20/18 | Crystal structure of sodium/alanine symporter AgcS with L-alanine bound | METHANOCOCCUS MARIPALUDIS (STRAIN S2 / LL); MUS MUSCULUS | mus musculus | mus musculus | methanococcus maripaludis (strain s2 / ll) | Ma, J., Reyes, F.E., Gonen, T. | 3.24 | X-RAY DIFFRACTION | 0.251 | 0.230 | false | false | IGHV6 | IGKV12 | Kappa | null | null | null | null | null |
6sc7 | B | null | 0 | A | protein | null | e3 ubiquitin-protein ligase rnf31 | LIGASE | 07/23/19 | dAb3/HOIP-RBR-Ligand3 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | synthetic construct | null | homo sapiens | Tsai, Y.-C.I., Johansson, H., House, D., Rittinger, K. | 2.56 | X-RAY DIFFRACTION | 0.267 | 0.224 | false | true | IGHV3 | null | null | null | null | null | null | null |
7nis | F | null | 0 | null | null | null | null | VIRAL PROTEIN | 02/13/21 | 1918 H1N1 Viral influenza polymerase heterotrimer with Nb8192 core | CAMELIDAE MIXED LIBRARY; INFLUENZA A VIRUS (STRAIN A/BREVIG MISSION/1/1918 H1N1); STAPHYLOCOCCUS AUREUS; SYNTHETIC CONSTRUCT | camelidae mixed library | null | null | Keown, J.R., Carrique, L., Fodor, E., Grimes, J.M. | 5.96 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
3idy | B | C | 0 | A | protein | null | hiv-1 hxbc2 gp120 core | IMMUNE SYSTEM | 07/22/09 | Crystal structure of HIV-gp120 core in complex with CD4-binding site antibody b13, space group C2221 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Chen, L., Kwon, Y.D., Zhou, T., Wu, X., O'Dell, S., Cavacini, L., Hessell, A.J., Pancera, M., Tang, M., Xu, L., Yang, Z.Y., Zhang, M.Y., Arthos, J., Burton, D.R., Dimitrov, D.S., Nabel, G.J., Posner, M., Sodroski, J., Wyatt, R., Mascola, J.R., Kwong, P.D. | 3.2 | X-RAY DIFFRACTION | 0.237 | 0.196 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -11.450945 | SPR | null | TBD |
6iw2 | N | O | 0 | M | protein | null | envelope protein e | VIRAL PROTEIN/IMMUNE SYSTEM | 12/04/18 | Crystal structure of 5A ScFv in complex with YFV-17D sE in prefusion state | YELLOW FEVER VIRUS (STRAIN 17D VACCINE); HOMO SAPIENS | homo sapiens | homo sapiens | yellow fever virus (strain 17d vaccine) | Lu, X.S., Xiao, H.X., Li, S.H., Pang, X.F. | 2.9 | X-RAY DIFFRACTION | 0.272 | 0.238 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
6xv8 | B | null | 0 | null | null | null | null | STRUCTURAL PROTEIN | 01/21/20 | Crystal structure of Megabody Mb-Nb207-c7HopQ_G10 | LAMA GLAMA; HELICOBACTER PYLORI (STRAIN G27) | lama glama, helicobacter pylori (strain g27) | null | null | Steyaert, J., Uchanski, T., Fischer, B. | 3.15 | X-RAY DIFFRACTION | 0.297 | 0.255 | false | true | IGHV1 | null | null | null | null | null | null | null |
6bzv | C | D | 0 | J | peptide | null | e2 as412 peptide | IMMUNE SYSTEM | 12/26/17 | Structure of the Hepatitis C virus envelope glycoprotein E2 antigenic region 412-423 bound to the GL precursor of the broadly neutralizing antibody 19B3 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | hepatitis c virus | Tzarum, N., Alemn, F., Wilson, I.A., Law, M. | 2.654 | X-RAY DIFFRACTION | 0.241 | 0.199 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
3hi5 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 05/18/09 | Crystal structure of Fab fragment of AL-57 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Zhang, H., Wang, J. | 2.5 | X-RAY DIFFRACTION | 0.277 | 0.234 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6bpe | H | I | 0 | G | protein | null | reticulocyte binding protein 2, putative | CELL INVASION | 11/22/17 | Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to monoclonal antibody 6H1 | PLASMODIUM VIVAX (STRAIN SALVADOR I); MUS MUSCULUS | mus musculus | mus musculus | plasmodium vivax (strain salvador i) | Gruszczyk, J., Chan, L.J., Tham, W.H. | 3.34 | X-RAY DIFFRACTION | 0.367 | 0.318 | false | false | IGHV5 | IGKV6 | Kappa | null | null | null | null | null |
7f7e | C | L | 0 | E | protein | null | spike protein s1 | VIRAL PROTEIN | 06/29/21 | SARS-CoV-2 S protein RBD in complex with A5-10 Fab | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Dou, Y., Wang, X., Wang, K., Liu, P., Lu, B. | 2.49 | X-RAY DIFFRACTION | 0.256 | 0.214 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5dtf | A | B | 0 | B | Hapten | 5CT | Hypusine | IMMUNE SYSTEM | 09/18/15 | context-independent anti-hypusine antibody FabHpu98.61 in complex with hypusine | ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT | oryctolagus cuniculus | oryctolagus cuniculus | oryctolagus cuniculus | Zhai, Q., Carter, P.J. | 1.9 | X-RAY DIFFRACTION | 0.254 | 0.212 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
2bx5 | null | K | 0 | null | null | null | null | ANTIBODY | 07/22/05 | Is FR1 the antibody's Achillies heel | ESCHERICHIA COLI | null | null | null | James, L.C. | 2.7 | X-RAY DIFFRACTION | 0.290 | 0.250 | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
5xp1 | null | G | 0 | null | null | null | null | IMMUNE SYSTEM | 05/31/17 | Structure of monomeric mutant of REI immunoglobulin light chain variable domain crystallized at pH 6 | HOMO SAPIENS | null | homo sapiens | null | Mine, S., Nakamura, T., Uegaki, K., Hamada, D. | 2.88 | X-RAY DIFFRACTION | 0.297 | 0.257 | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
3piq | E | F | 0 | null | null | null | null | IMMUNE SYSTEM | 11/07/10 | Crystal structure of human 2909 Fab, a quaternary structure-specific antibody against HIV-1 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Changela, A., Gorny, M.K., Zolla-Pazner, S., Kwong, P.D. | 3.325 | X-RAY DIFFRACTION | 0.299 | 0.236 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
6feq | F | E | 0 | A | protein | null | atp-binding cassette sub-family g member 2 | MEMBRANE PROTEIN | 01/03/18 | Structure of inhibitor-bound ABCG2 | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Jackson, S.M., Manolaridis, I., Kowal, J., Zechner, M., Altmann, K.H., Locher, K.P. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV13 | Kappa | null | null | null | null | null |
3mod | H | L | 0 | P | peptide | null | gp41 mper-derived peptide | IMMUNE SYSTEM | 04/22/10 | Crystal structure of the neutralizing HIV antibody 2F5 Fab fragment (recombinantly produced IgG) with 11 aa gp41 MPER-derived peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | null | homo sapiens | Nicely, N.I., Dennison, S.M., Kelsoe, G., Liao, H.-X., Alam, S.M., Haynes, B.F. | 2.2 | X-RAY DIFFRACTION | 0.214 | 0.184 | false | true | IGHV2 | IGKV1 | Kappa | null | null | null | null | null |
3thm | H | L | 0 | F | protein | null | tumor necrosis factor receptor superfamily member 6 | IMMUNE SYSTEM | 08/19/11 | Crystal structure of Fas receptor extracellular domain in complex with Fab EP6b_B01 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Zuger, S., Stirnimann, C., Briand, C., Grutter, M.G. | 2.1 | X-RAY DIFFRACTION | 0.221 | 0.183 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
7mfa | M | N | 0 | null | null | null | null | IMMUNE SYSTEM | 04/08/21 | Crystal structure of antibody 10E8v4-P100fA+P100gA Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Kwon, Y.D., Kwong, P.D. | 2.4 | X-RAY DIFFRACTION | 0.286 | 0.238 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
1ngy | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 12/18/02 | Chimeric Mature Fab 7g12-Apo | MUS MUSCULUS, HOMO SAPIENS | mus musculus, homo sapiens | mus musculus, homo sapiens | null | Yin, J., Andryski, S.A., Beuscher, A.B., Stevens, R.C., Schultz, P.G. | 2.2 | X-RAY DIFFRACTION | 0.273 | 0.235 | false | true | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
7llk | G | H | 0 | E | protein | null | envelope glycoprotein gp120 | IMMUNE SYSTEM/VIRAL PROTEIN | 02/04/21 | Cryo-EM structure of Q23.17_DS-SOSIP in complex with Glycan276-Dependent Broadly Neutralizing Antibody 179NC75 Fab | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Manne, K., Acharya, P. | 4.8 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
1xfp | A | null | 0 | L | protein | null | lysozyme c | IMMUNE SYSTEM/HYDROLASE | 09/15/04 | Crystal structure of the CDR2 germline reversion mutant of cAb-Lys3 in complex with hen egg white lysozyme | CAMELUS DROMEDARIUS; GALLUS GALLUS | camelus dromedarius | null | gallus gallus | De Genst, E., Handelberg, F., Van Meirhaeghe, A., Vynck, S., Loris, R., Wyns, L., Muyldermans, S. | 1.5 | X-RAY DIFFRACTION | 0.216 | 0.201 | false | true | IGHV1 | null | null | null | null | null | null | null |
6u02 | D | C | 0 | B | protein | null | neuraminidase | VIRAL PROTEIN/IMMUNE SYSTEM | 08/13/19 | CryoEM-derived model of NA-63 Fab in complex with N9 Shanghai2 | INFLUENZA A VIRUS (A/ENVIRONMENT/SHANGHAI/S1439/2013(H7N9)); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus(a/environment/shanghai/s1439/2013(h7n9)) | Ward, A.B., Turner, H.L., Zhu, X. | 3.05 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6ca7 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 01/29/18 | Crystal structure of PCT64_13C, a strain specific anti-HIV antibody | HOMO SAPIENS | homo sapiens | homo sapiens | null | Murrell, S., Wilson, I.A. | 1.643 | X-RAY DIFFRACTION | 0.190 | 0.169 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
5a3i | G | H | 0 | E | protein | null | hemagglutinin | VIRAL PROTEIN | 06/01/15 | Crystal Structure of a Complex formed between FLD194 Fab and Transmissible Mutant H5 Haemagglutinin | INFLUENZA A VIRUS (A/VIETNAM/1203/2004(H5N1)); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus (a/vietnam/1203/2004(h5n1)) | Xiong, X., Corti, D., Liu, J., Pinna, D., Foglierini, M., Calder, L.J., Martin, S.R., Lin, Y.P., Walker, P.A., Collins, P.J., Monne, I., Suguitan Jr, A.L., Santos, C., Temperton, N.J., Subbarao, K., Lanzavecchia, A., Gamblin, S.J., Skehel, J.J. | 2.89 | X-RAY DIFFRACTION | 0.277 | 0.244 | false | false | IGHV5 | IGKV2 | Kappa | null | null | null | null | null |
5obf | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 06/26/17 | fAb. AbVance: increasing our knowledge of antibody structural space to enable faster and better decision-making in antibody drug discovery. | MUS MUSCULUS | mus musculus | mus musculus | null | Vicentini, G., Convery, M.A. | 1.92 | X-RAY DIFFRACTION | 0.210 | 0.174 | false | true | IGHV14 | IGKV2 | Kappa | null | null | null | null | null |
4yfl | H | L | 0 | G | protein | null | envelope glycoprotein gp160,envelope glycoprotein gp160,envelope glycoprotein gp160 | IMMUNE SYSTEM | 02/25/15 | Crystal structure of VH1-46 germline-derived CD4-binding site-directed antibody 1B2530 in complex with HIV-1 clade A/E 93TH057 gp120 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Zhou, T., Moquin, S., Kwong, P.D. | 3.387 | X-RAY DIFFRACTION | 0.326 | 0.268 | false | true | unknown | IGLV1 | Lambda | null | null | null | null | null |
6iyn | A | null | 5 | null | null | null | null | AFLATOXIN B1-BINDING PROTEIN | 12/17/18 | Solution structure of camelid nanobody Nb26 against aflatoxin B1 | VICUGNA PACOS | vicugna pacos | null | null | Nie, Y., He, T., Zhu, J., Li, S.L., Hu, R., Yang, Y.H. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
5d1z | D | C | 0 | I | protein | null | iron-regulated surface determinant protein b | IMMUNE SYSTEM | 08/04/15 | IsdB NEAT1 bound by clone D4-10 | HOMO SAPIENS; STAPHYLOCOCCUS AUREUS (STRAIN MSSA476) | homo sapiens | homo sapiens | staphylococcus aureus (strain mssa476) | Deng, X. | 3.17 | X-RAY DIFFRACTION | 0.287 | 0.233 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
7tb8 | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/Immune System | 12/21/21 | Cryo-EM structure of SARS-CoV-2 spike in complex with antibodies B1-182.1 and A19-61.1 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, T., Tsybovsky, T., Kwong, P.D. | 2.83 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
1dqq | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 01/04/00 | CRYSTAL STRUCTURE OF ANTI-LYSOZYME ANTIBODY HYHEL-63 | MUS MUSCULUS | mus musculus | mus musculus | null | Li, H., Mariuzza, R.A. | 1.8 | X-RAY DIFFRACTION | 0.255 | 0.210 | false | true | IGHV3 | IGKV5 | Kappa | null | null | null | null | null |
7mdw | A | null | 0 | R | protein | null | spike protein s1 | VIRAL PROTEIN/Immune System | 04/06/21 | CryoEM structure of SARS-CoV-2 RBD in complex with nanobodies Nb21 and Nb105 | LAMA GLAMA; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | lama glama | null | severe acute respiratory syndrome coronavirus2 | Huang, W., Taylor, D.J. | 3.58 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
4nbz | D | null | 0 | C | protein | null | tcda | IMMUNE SYSTEM | 10/23/13 | Crystal Structure of TcdA-A1 Bound to A26.8 VHH | CLOSTRIDIUM DIFFICILE; LAMA GLAMA | lama glama | null | clostridium difficile | Murase, T., Eugenio, L., Schorr, M., Hussack, G., Tanha, J., Kitova, E.N., Klassen, J.S., Ng, K.K.S. | 1.75 | X-RAY DIFFRACTION | 0.247 | 0.206 | false | true | IGHV1 | null | null | null | null | null | null | null |
2ajv | H | L | 0 | L | Hapten | COC | COCAINE | IMMUNE SYSTEM | 08/02/05 | Crystal Structure of Cocaine catalytic Antibody 7A1 Fab' in Complex with Cocaine | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Zhu, X., Wilson, I.A. | 1.5 | X-RAY DIFFRACTION | 0.227 | 0.182 | false | false | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
4fqr | e | f | 0 | E | protein | null | broadly neutralizing antibody c05, heavy chain | VIRAL PROTEIN/IMMUNE SYSTEM | 06/25/12 | Crystal structure of broadly neutralizing antibody C05 bound to H3 influenza hemagglutinin | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | Ekiert, D.C., Wilson, I.A. | 4.1 | X-RAY DIFFRACTION | 0.334 | 0.309 | false | false | IGHV3 | IGKV1 | Kappa | 0 | -9.549709 | SPR | null | TBD |
1nmc | H | L | 0 | N | protein | null | neuraminidase | COMPLEX (SINGLE-CHAIN ANTIBODY/ANTIGEN) | 12/21/97 | COMPLEX BETWEEN NC10 ANTI-INFLUENZA VIRUS NEURAMINIDASE SINGLE CHAIN ANTIBODY WITH A 15 RESIDUE LINKER AND INFLUENZA VIRUS NEURAMINIDASE | INFLUENZA A VIRUS; MUS MUSCULUS | mus musculus | mus musculus | influenza a virus | Malby, R.L., Mccoy, A.J., Kortt, A.A., Hudson, P.J., Colman, P.M. | 2.5 | X-RAY DIFFRACTION | 0.260 | 0.220 | false | true | IGHV1 | IGKV10 | Kappa | null | null | null | null | null |
5cus | I | M | 0 | B | protein | null | receptor tyrosine-protein kinase erbb-3 | TRANSFERASE | 07/25/15 | Crystal Structure of sErbB3-Fab3379 Complex | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Lee, S., Schlessinger, J. | 3.2 | X-RAY DIFFRACTION | 0.278 | 0.252 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
7sp7 | B | null | 0 | A | protein | null | hyaluronan synthase | MEMBRANE PROTEIN | 11/02/21 | Chlorella virus hyaluronan synthase inhibited by UDP | PARAMECIUM BURSARIA CHLORELLA VIRUS CZ-2; LAMA GLAMA | lama glama | null | paramecium bursaria chlorella virus cz-2 | Maloney, F.P., Kuklewicz, J., Zimmer, J. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
4zyk | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 05/21/15 | Crystal Structure of Quaternary-Specific RSV-Neutralizing Human Antibody AM14 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Gilman, M.S.A., McLellan, J.S. | 2.0 | X-RAY DIFFRACTION | 0.226 | 0.186 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6w1c | L | P | 0 | H | protein | null | e2 glycoprotein | VIRUS/IMMUNE SYSTEM | 03/04/20 | Human mAbs broadly protect against infection of arthritiogenic alphaviruses by recognizing conserved elements of the MXR8 receptor binding domain | MAYARO VIRUS (STRAIN BRAZIL); HOMO SAPIENS | homo sapiens | homo sapiens | mayaro virus (strain brazil) | Miller, A.S., Kuhn, R.J. | 5.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV9 | IGLV1 | Lambda | null | null | null | null | null |
7dk6 | a | b | 0 | A | protein | null | the heavy chain of 2h2 fab | VIRAL PROTEIN | 11/23/20 | S-2H2-F2 structure, two RBDs are up and one RBD is down, each up RBD binds with a 2H2 Fab. | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Cong, Y., Wang, Y.F. | 4.3 | ELECTRON MICROSCOPY | null | null | false | false | IGHV2 | IGKV3 | Kappa | null | null | null | null | null |
5mub | F | G | 0 | H | peptide | null | triple-helical peptide containing the citrullinated c1epitope of collagen type ii,collagen alpha-1(ii) chain,triple-helical peptide containing the citrullinated c1 epitope of collagen type ii | IMMUNE SYSTEM | 01/13/17 | ACC1 Fab fragment in complex with citrullinated C1 epitope of CII (CG05) | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | mus musculus | Dobritzsch, D., Holmdahl, R., Ge, C. | 3.1 | X-RAY DIFFRACTION | 0.264 | 0.231 | false | false | IGHV6 | IGKV3 | Kappa | null | null | null | null | null |
2bx5 | null | F | 0 | null | null | null | null | ANTIBODY | 07/22/05 | Is FR1 the antibody's Achillies heel | ESCHERICHIA COLI | null | null | null | James, L.C. | 2.7 | X-RAY DIFFRACTION | 0.290 | 0.250 | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
5nml | I | null | 0 | null | null | null | null | IMMUNE SYSTEM | 04/06/17 | Nb36 Ser85Cys with Hg bound | LAMA GLAMA | lama glama | null | null | Hansen, S.B., Andersen, K.R., Laursen, N.S., Andersen, G.R. | 2.5 | X-RAY DIFFRACTION | 0.265 | 0.238 | false | true | IGHV1 | null | null | null | null | null | null | null |
1u8m | B | A | 0 | C | peptide | null | gp41 peptide | IMMUNE SYSTEM | 08/06/04 | Crystal structure of the HIV-1 Cross Neutralizing Monoclonal Antibody 2F5 in complex with gp41 Peptide ELDKYAS | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Bryson, S., Julien, J.-P., Hynes, R.C., Pai, E.F. | 2.4 | X-RAY DIFFRACTION | 0.225 | 0.218 | false | false | IGHV2 | IGKV1 | Kappa | null | null | null | null | null |
4tuk | H | L | 0 | I | peptide | null | peptide2 | IMMUNE SYSTEM | 06/24/14 | Crystal structure of monoclonal antibody against neuroblastoma associated antigen. | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | phage #d | Golik, P., Grudnik, P., Dubin, G., Horwacik, I., Zdzalik, M., Rokita, H. | 1.6 | X-RAY DIFFRACTION | 0.206 | 0.162 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
2vxs | H | L | 0 | B | protein | null | interleukin-17a | CYTOKINE | 07/09/08 | Structure of IL-17A in complex with a potent, fully human neutralising antibody | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Gerhardt, S., Hargreaves, D., Pauptit, R.A., Davies, R.A., Russell, C., Welsh, F., Tuske, S.J., Coales, S.J., Hamuro, Y., Needham, M.R.C., Langham, C., Barker, W., Bell, P., Aziz, A., Smith, M.J., Dawson, S., Abbott, W.M. | 2.63 | X-RAY DIFFRACTION | 0.264 | 0.213 | false | true | IGHV3 | IGLV6 | Lambda | 0 | -11.83 | SPR | null | 19835883 |
2itd | A | B | 0 | C | protein | null | voltage-gated potassium channel | MEMBRANE PROTEIN | 10/19/06 | Potassium Channel KcsA-Fab complex in Barium Chloride | STREPTOMYCES LIVIDANS; MUS MUSCULUS | mus musculus | mus musculus | streptomyces lividans | Lockless, S.W., Zhou, M., MacKinnon, R. | 2.7 | X-RAY DIFFRACTION | 0.261 | 0.241 | false | false | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
7p5w | J | null | 0 | D | protein | null | volume-regulated anion channel subunit lrrc8a | MEMBRANE PROTEIN | 07/15/21 | Structure of homomeric LRRC8A Volume-Regulated Anion Channel in complex with synthetic nanobody Sb2 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | synthetic construct | null | mus musculus | Deneka, D., Rutz, S., Sawicka, M. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
3v6f | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 12/19/11 | Crystal Structure of an anti-HBV e-antigen monoclonal Fab fragment (e6), unbound | MUS MUSCULUS | mus musculus | mus musculus | null | Dimattia, M.A., Watts, N.R., Stahl, S.J., Grimes, J.M., Steven, A.C., Stuart, D.I., Wingfield, P.T. | 2.52 | X-RAY DIFFRACTION | 0.220 | 0.179 | false | false | IGHV5 | IGKV8 | Kappa | null | null | null | null | null |
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