pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
2fjf | P | O | 0 | null | null | null | null | IMMUNE SYSTEM | 01/02/06 | Structure of the G6 Fab, a phage derived VEGF binding Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Wiesmann, C. | 2.65 | X-RAY DIFFRACTION | 0.248 | 0.199 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4g7v | H | L | 0 | S | protein | null | voltage-sensor containing phosphatase | membrane protein | 07/20/12 | Crystal structure of voltage sensing domain of Ci-VSP with fragment antibody (R217E, 2.5 A) | CIONA INTESTINALIS; HOMO SAPIENS | homo sapiens | homo sapiens | ciona intestinalis | Li, Q. | 2.5 | X-RAY DIFFRACTION | 0.240 | 0.201 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6iyn | A | null | 1 | null | null | null | null | AFLATOXIN B1-BINDING PROTEIN | 12/17/18 | Solution structure of camelid nanobody Nb26 against aflatoxin B1 | VICUGNA PACOS | vicugna pacos | null | null | Nie, Y., He, T., Zhu, J., Li, S.L., Hu, R., Yang, Y.H. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
6qfa | L | null | 0 | C | protein | null | gamma-aminobutyric acid receptor subunit beta-3,gamma-aminobutyric acid receptor subunit beta-3 | MEMBRANE PROTEIN | 01/09/19 | CryoEM structure of a beta3K279T GABA(A)R homomer in complex with histamine and megabody Mb25 | HOMO SAPIENS; HELICOBACTER PYLORI (STRAIN G27); LAMA GLAMA | helicobacter pylori (strain g27), lama glama | null | homo sapiens | Uchanski, T., Masiulis, S., Fischer, B., Kalichuk, V., Wohlkoening, A., Zoegg, T., Remaut, H., Vranken, W., Aricescu, A.R., Pardon, E., Steyaert, J. | 2.49 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
6u54 | A | null | 0 | B | protein | null | nucleoprotein | IMMUNE SYSTEM | 08/26/19 | Anti-Zaire ebolavirus Nucleoprotein Single Domain Antibody Zaire C (ZC) Complexed with Zaire ebolavirus Nucleoprotein C-terminal Domain 634-739 | LAMA GLAMA; ZAIRE EBOLAVIRUS (STRAIN KIKWIT-95) | lama glama | null | zaire ebolavirus (strain kikwit-95) | Taylor, A.B., Sherwood, L.J., Hart, P.J., Hayhurst, A. | 1.6 | X-RAY DIFFRACTION | 0.215 | 0.173 | false | true | IGHV1 | null | null | null | null | null | null | null |
5occ | H | L | 0 | A | protein | null | low affinity immunoglobulin gamma fc region receptor ii-b | IMMUNE SYSTEM | 06/30/17 | Crystal structure of CD32b (Fc Gamma Receptor IIb) in complex with Human IgG1 Fab fragment (6G08) | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Tews, I., Orr, C. | 2.5 | X-RAY DIFFRACTION | 0.261 | 0.192 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
7ryv | I | J | 0 | null | null | null | null | IMMUNE SYSTEM | 08/26/21 | Anti-HIV neutralizing antibody Ab1573 Fab isolated from sequentially immunized macaques | MACACA MULATTA | macaca mulatta | macaca mulatta | null | Yang, Z., Bjorkman, P.J. | 2.5 | X-RAY DIFFRACTION | 0.254 | 0.216 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
7mx8 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 05/18/21 | Crystal Structure of HPV L1-directed E7M03 Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Singh, S., Pancera, M. | 2.02 | X-RAY DIFFRACTION | 0.246 | 0.208 | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null |
7l1u | H | h | 0 | A | B | protein | protein | NA | NA | engineered guanine nucleotide-binding protein subunitalpha | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 12/15/20 | Orexin Receptor 2 (OX2R) in Complex with G Protein and Natural Peptide-Agonist Orexin B (OxB) | HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | null | homo sapiens | homo sapiens | Hong, C., Byrne, N.J., Zamlynny, B., Tummala, S., Xiao, L., Shipman, J.M., Partridge, A.T., Minnick, C., Breslin, M.J., Rudd, M.T., Stachel, S.J., Rada, V.L., Kern, J.C., Armacost, K.A., Hollingsworth, S.A., O'Brien, J.A., Hall, D.L., McDonald, T.P., Strickland, C., Brooun, A., Soisson, S.M., Hollenstein, K. | 3.2 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
5gs1 | D | d | 0 | null | null | null | null | IMMUNE SYSTEM | 08/13/16 | Crystal structure of homo-specific diabody | HOMO SAPIENS | homo sapiens | null | null | Kim, J.H., Song, D.H., Youn, S.J., Kim, J.W., Cho, G., Lee, H., Lee, J.O. | 2.0 | X-RAY DIFFRACTION | 0.286 | 0.267 | true | true | unknown | unknown | unknown | null | null | null | null | null |
5fcu | H | L | 0 | G | protein | null | clade a/e 93th057 hiv-1 gp120 core | VIRAL PROTEIN/IMMUNE SYSTEM | 12/15/15 | CRYSTAL STRUCTURE OF THE INNER DOMAIN OF CLADE A/E HIV-1 GP120 IN COMPLEX WITH THE ADCC-POTENT RHESUS MACAQUE ANTIBODY JR4 | MACACA MULATTA; HUMAN IMMUNODEFICIENCY VIRUS 1 | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | Gohain, N., Tolbert, W.D., Pazgier, M. | 1.85 | X-RAY DIFFRACTION | 0.223 | 0.184 | false | true | IGHV4 | IGLV1 | Lambda | 0 | -11.216609 | SPR | null | TBD |
7x7d | C | null | 0 | D | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 03/09/22 | SARS-CoV-2 Delta RBD and Nb22 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; VICUGNA PACOS | vicugna pacos | null | severe acute respiratory syndrome coronavirus2 | Wang, Y., Ye, S. | 2.92 | X-RAY DIFFRACTION | 0.256 | 0.205 | false | true | IGHV1 | null | null | null | null | null | null | null |
6cez | H | L | 0 | P | peptide | null | hiv-1 gp120 v2 peptide con b | IMMUNE SYSTEM | 02/13/18 | Crystal Structure of Rabbit Anti-HIV-1 gp120 V2 Fab 16C2 in complex with V2 peptide ConB | ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT | oryctolagus cuniculus | oryctolagus cuniculus | human immunodeficiency virus 1 | Kong, X., Pan, R. | 2.399 | X-RAY DIFFRACTION | 0.296 | 0.237 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7cwn | E | D | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN | 08/29/20 | P17-H014 Fab cocktail in complex with SARS-CoV-2 spike protein | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Wang, N., Wang, X. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
6gkd | H | null | 0 | F | protein | null | cystic fibrosis transmembrane conductance regulator | HYDROLASE | 05/18/18 | human NBD1 of CFTR in complex with nanobodies D12 and G3a | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Sigoillot, M., Overtus, M., Grodecka, M., Scholl, D., Garcia-Pino, A., Laeremans, T., He, L., Pardon, E., Hildebrandt, E., Urbatsch, I., Steyaert, J., Riordan, J.R., Govaerts, C. | 2.99 | X-RAY DIFFRACTION | 0.235 | 0.204 | false | true | IGHV1 | null | null | null | null | null | null | null |
6z10 | B | null | 0 | A | protein | null | succinate receptor 1 | MEMBRANE PROTEIN | 05/11/20 | Crystal structure of a humanized (K18E, K269N) rat succinate receptor SUCNR1 (GPR91) in complex with a nanobody and antagonist | RATTUS NORVEGICUS; VICUGNA PACOS | vicugna pacos | null | rattus norvegicus | Haffke, M., Villard, F. | 2.269 | X-RAY DIFFRACTION | 0.223 | 0.204 | false | true | IGHV1 | null | null | null | null | null | null | null |
7kdm | F | null | 0 | E | D | protein | protein | NA | NA | ricin chain b | ricin chain a | TOXIN | 10/08/20 | Ricin bound to VHH antibody V5G6 | LAMA GLAMA; RICINUS COMMUNIS | lama glama | null | ricinus communis | ricinus communis | Rudolph, M.J. | 2.301 | X-RAY DIFFRACTION | 0.238 | 0.187 | false | true | IGHV1 | null | null | null | null | null | null | null |
7mw5 | H | L | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/Immune System | 05/15/21 | Structure of the SARS-CoV-2 Spike trimer with one RBD down in complex with the Fab fragment of human neutralizing antibody clone 2 | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Hu, Y., Xiong, Y. | 3.42 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6w4s | H | L | 0 | F | protein | null | solute carrier family 40 member 1 | TRANSPORT PROTEIN/IMMUNE SYSTEM | 03/11/20 | Structure of apo human ferroportin in lipid nanodisc | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Billesboelle, C.B., Azumaya, C.M., Gonen, S., Powers, A., Kretsch, R.C., Schneider, S., Arvedson, T., Dror, R.O., Cheng, Y., Manglik, A. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
5k9q | G | I | 0 | D | C | E | protein | protein | protein | NA | NA | NA | hemagglutinin ha2 | hemagglutinin ha1 | hemagglutinin ha1 | IMMUNE SYSTEM | 06/01/16 | Crystal structure of multidonor HV1-18-class broadly neutralizing Influenza A antibody 16.a.26 in complex with A/Hong Kong/1-4-MA21-1/1968 (H3N2) Hemagglutinin | INFLUENZA A VIRUS; INFLUENZA A VIRUS (STRAIN A/HONG KONG/1/1968 H3N2); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus (strain a/hong kong/1/1968h3n2) | influenza a virus | influenza a virus | Joyce, M.G., Thomas, P.V., Wheatley, A.K., McDermott, A.B., Mascola, J.R., Kwong, P.D. | 2.503 | X-RAY DIFFRACTION | 0.218 | 0.182 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
1qlr | D | C | 0 | null | null | null | null | IMMUNOGLOBULIN | 09/11/99 | CRYSTAL STRUCTURE OF THE FAB FRAGMENT OF A HUMAN MONOCLONAL IgM COLD AGGLUTININ | HOMO SAPIENS | homo sapiens | homo sapiens | null | Carvalho, J.G., Cauerhff, A., Goldbaum, F., Leoni, J., Polikarpov, I. | 2.83 | X-RAY DIFFRACTION | 0.265 | 0.216 | false | false | IGHV4 | IGKV3D | Kappa | null | null | null | null | null |
7e9h | D | d | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-3 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 03/04/21 | Cryo-EM structure of Gi-bound metabotropic glutamate receptor mGlu4 | HOMO SAPIENS | homo sapiens | null | homo sapiens | homo sapiens | Lin, S., Han, S., Zhao, Q., Wu, B. | 4 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
7pi3 | B | C | 0 | A | protein | null | monoclonal antibody cy.004 heavy chain | IMMUNE SYSTEM | 08/19/21 | PfCyRPA bound to Fab fragments from monoclonal antibodies Cy.003, Cy.004 and Cy.007 | PLASMODIUM FALCIPARUM 3D7; GALLUS GALLUS | gallus gallus | gallus gallus | plasmodium falciparum 3d7 | Ragotte, R.J., Higgins, M.K. | 3.269 | X-RAY DIFFRACTION | 0.298 | 0.285 | false | true | unknown | unknown | unknown | null | null | null | null | null |
2kh2 | B | b | 40 | A | protein | null | interleukin-1 beta | Cytokine/IMMUNE SYSTEM | 03/23/09 | Solution structure of a scFv-IL-1B complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Wilkinson, I.C., Hall, C.J., Veverka, V., Muskett, F.W., Stephens, P.E., Taylor, R.J., Henry, A.J., Carr, M.D. | NOT | SOLUTION NMR | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
7np1 | I | M | 0 | B | protein | null | spike protein s1 | VIRAL PROTEIN | 02/26/21 | Crystal Structure of the SARS-CoV-2 Receptor Binding Domain in Complex with Antibody ION-360 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Hall, G., Cowan, R., Carr, M. | 2.8 | X-RAY DIFFRACTION | 0.281 | 0.232 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
1c5d | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 11/17/99 | THE CRYSTAL STRUCTURE OF THE FAB FRAGMENT OF A RAT MONOCLONAL ANTIBODY AGAINST THE MAIN IMMUNOGENIC REGION OF THE HUMAN MUSCLE ACETYLCHOLINE RECEPTOR | RATTUS NORVEGICUS | rattus norvegicus | rattus norvegicus | null | Kontou, M., Leonidas, D.D., Vatzaki, E.H., Tsantili, P., Mamalaki, A., Oikonomakos, N.G., Acharya, K.R., Tzartos, S.J. | 2.4 | X-RAY DIFFRACTION | 0.304 | 0.196 | false | false | IGHV2 | IGKV19 | Kappa | null | null | null | null | null |
5f9a | C | null | 0 | A | protein | null | adhesin binding fucosylated histo-blood group antigen,adhesin,adhesin binding fucosylated histo-blood group antigen | CELL ADHESION | 12/09/15 | Blood group antigen binding adhesin BabA of Helicobacter pylori strain P436 in complex with blood group H Lewis b hexasaccharide | HELICOBACTER PYLORI; LAMA GLAMA | lama glama | null | helicobacter pylori | Moonens, K., Gideonsson, P., Subedi, S., Romao, E., Oscarson, S., Muyldermans, S., Boren, T., Remaut, H. | 2.44 | X-RAY DIFFRACTION | 0.257 | 0.205 | false | true | IGHV1 | null | null | null | null | null | null | null |
7prz | H | L | 0 | E | protein | null | surface glycoprotein | VIRAL PROTEIN | 09/22/21 | Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with beta-22 Fabs | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Ren, J., Stuart, D.I. | 3.2 | X-RAY DIFFRACTION | 0.223 | 0.190 | false | true | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
6xey | J | K | 0 | C | protein | null | sars-cov-2 spike glycoprotein | VIRAL PROTEIN/Immune System | 06/14/20 | Cryo-EM structure of the SARS-CoV-2 spike glycoprotein bound to Fab 2-4 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Rapp, M., Shapiro, L., Ho, D.D. | 3.25 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
2kqm | null | A | 7 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the KI O18/O8 Y87H immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
6rqm | B | null | 0 | A | protein | null | cytotoxic t-lymphocyte protein 4 | IMMUNE SYSTEM | 05/16/19 | A blocking anti-CTLA-4 Nanobody (KN044) complexed with CTLA-4 | CAMELUS BACTRIANUS; HOMO SAPIENS | camelus bactrianus | null | homo sapiens | Zhang, F., Zhou, A., Gao, H. | 3.0 | X-RAY DIFFRACTION | 0.313 | 0.250 | false | true | IGHV3 | null | null | null | null | null | null | null |
7te8 | C | null | 0 | C | Hapten | P0T | cannabidiol | BIOSYNTHETIC PROTEIN | 01/04/22 | CA14-CBD-DB21 ternary complex | ARTIFICIAL SEQUENCES | artificial sequences | null | artificial sequences | Cao, S., Zheng, N. | 1.998 | X-RAY DIFFRACTION | 0.211 | 0.180 | false | true | IGHV1 | null | null | null | null | null | null | null |
6k68 | F | G | 0 | I | protein | null | protein a | STRUCTURAL PROTEIN | 06/01/19 | Application of anti-helix antibodies in protein structure determination (8420-3MNZ) | HUMAN IMMUNODEFICIENCY VIRUS 1; STAPHYLOCOCCUS AUREUS | human immunodeficiency virus 1 | human immunodeficiency virus 1 | staphylococcus aureus | Lee, J.O., Jin, M.S., Kim, J.W., Kim, S., Lee, H., Cho, G.Y. | 3.2 | X-RAY DIFFRACTION | 0.318 | 0.289 | false | true | IGHV9 | IGKV8 | Kappa | null | null | null | null | null |
2b2x | H | L | 0 | A | protein | null | integrin alpha-1 | Immune system | 09/19/05 | VLA1 RdeltaH I-domain complexed with a quadruple mutant of the AQC2 Fab | RATTUS NORVEGICUS; MUS MUSCULUS | mus musculus | mus musculus | rattus norvegicus | Clark, L.A., Boriack-Sjodin, P.A., Eldredge, J., Fitch, C., Friedman, B., Hanf, K.J., Jarpe, M., Liparoto, S.F., Li, Y., Lugovskoy, A. | 2.2 | X-RAY DIFFRACTION | 0.272 | 0.238 | false | true | IGHV5 | IGKV4 | Kappa | 0 | -11.95 | Other | null | 16597831 |
7shz | E | F | 0 | B | protein | null | ige fc | IMMUNE SYSTEM | 10/11/21 | IgE-Fc in complex with HAE | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Pennington, L.F., Jardetzky, T.J., Kleinboelting, S. | 3.0 | X-RAY DIFFRACTION | 0.236 | 0.186 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6rty | B | null | 0 | A | protein | null | protein patched homolog 1 | MEMBRANE PROTEIN | 05/27/19 | Crystal structure of the Patched ectodomain in complex with nanobody NB64 | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Rudolf, A.F., Kowatsch, C., El Omari, K., Malinauskas, T., Kinnebrew, M., Ansell, T.B., Bishop, B., Pardon, E., Schwab, R.A., Qian, M., Duman, R., Covey, D.F., Steyaert, J., Wagner, A., Sansom, M.S.P., Rohatgi, R., Siebold, C. | 2.1 | X-RAY DIFFRACTION | 0.255 | 0.216 | false | true | IGHV1 | null | null | null | null | null | null | null |
2mkw | null | A | 15 | null | null | null | null | IMMUNE SYSTEM | 02/13/14 | Solution Structure of 6aJl2 and 6aJL2-R24G Amyloidogenics Light Chain Proteins | HOMO SAPIENS | null | homo sapiens | null | Amero, C., Maya-Martinez, R.C., Gil-Rodriguez, P.C. | NOT | SOLUTION NMR | null | null | false | true | null | IGLV6 | Lambda | null | null | null | null | null |
3ze2 | E | F | 0 | A | protein | null | integrin alpha-iib | CELL ADHESION/IMMUNE SYSTEM/PEPTIDE | 12/03/12 | Integrin alphaIIB beta3 headpiece and RGD peptide complex | HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Zhu, J.H., Zhu, J.Q., Springer, T.A. | 2.35 | X-RAY DIFFRACTION | 0.2037 | 0.1753 | false | true | IGHV14 | IGKV14 | Kappa | null | null | null | null | null |
3mlt | I | G | 0 | null | null | null | null | IMMUNE SYSTEM | 04/18/10 | Crystal structure of anti-HIV-1 V3 Fab 2557 in complex with a UG1033 V3 peptide | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | null | Kong, X.-P. | 2.49 | X-RAY DIFFRACTION | 0.280 | 0.202 | false | false | IGHV5 | IGLV3 | Lambda | null | null | null | null | null |
6uul | A | B | 0 | E | carbohydrate | NAG | N-ACETYL-D-GLUCOSAMINE | IMMUNE SYSTEM | 10/30/19 | Crystal structure of broad and potent HIV-1 neutralizing antibody 438-D5 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Kumar, S., Wilson, I.A. | 2.06 | X-RAY DIFFRACTION | 0.246 | 0.201 | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null |
7zf5 | B | C | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN | 04/01/22 | SARS-CoV-2 Omicron RBD in complex with Omi-12 and Beta-54 Fabs | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Huo, J., Ren, J., Stuart, D.I. | 5.32 | X-RAY DIFFRACTION | 0.256 | 0.249 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
4qhk | M | N | 0 | null | null | null | null | IMMUNE SYSTEM | 05/28/14 | UCA (unbound) from CH103 Lineage | HOMO SAPIENS | homo sapiens | homo sapiens | null | Fera, D., Harrison, S.C. | 3.487 | X-RAY DIFFRACTION | 0.285 | 0.269 | false | true | IGHV4 | IGLV3 | Lambda | null | null | null | null | null |
5kel | C | D | 0 | A | protein | null | ebola surface glycoprotein, gp1 | VIRAL PROTEIN/IMMUNE SYSTEM | 06/09/16 | EBOV GP in complex with variable Fab domains of IgGs c2G4 and c13C6 | ZAIRE EBOLAVIRUS; HOMO SAPIENS; ZAIRE EBOLAVIRUS (STRAIN MAYINGA-76) | homo sapiens | homo sapiens | zaire ebolavirus (strain mayinga-76) | Pallesen, J., Murin, C.D., de Val, N., Cottrell, C.A., Hastie, K.M., Turner, H.L., Fusco, M.L., Flyak, A.I., Zeitlin, L., Crowe Jr., J.E., Andersen, K.G., Saphire, E.O., Ward, A.B. | 4.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV8 | IGKV6 | Kappa | null | null | null | null | null |
3ze0 | H | L | 0 | A | D | protein | protein | NA | NA | integrin alpha-iib | integrin beta-3 | CELL ADHESION/IMMUNE SYSTEM/PEPTIDE | 12/03/12 | Integrin alphaIIB beta3 headpiece and RGD peptide complex | MUS MUSCULUS; HOMO SAPIENS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | homo sapiens | Zhu, J.H., Zhu, J.Q., Springer, T.A. | 2.95 | X-RAY DIFFRACTION | 0.2427 | 0.1847 | false | true | IGHV14 | IGKV14 | Kappa | null | null | null | null | null |
6ot1 | Q | R | 0 | P | protein | null | bg505 gp120 | IMMUNE SYSTEM | 05/02/19 | Cryo-EM structure of vaccine-elicited antibody 0PV-b.01 in complex with HIV-1 Env BG505 DS-SOSIP and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Gorman, J., Kwong, P.D. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | unknown | unknown | null | null | null | null | null |
6oan | D | d | 0 | C | protein | null | duffy binding surface protein region ii | CELL INVASION | 03/18/19 | Structure of DBP in complex with human neutralizing antibody 053054 | PLASMODIUM VIVAX; HOMO SAPIENS | homo sapiens | null | plasmodium vivax | Urusova, D., Tolia, N.H. | 2.9 | X-RAY DIFFRACTION | 0.252 | 0.230 | true | true | unknown | unknown | unknown | null | null | null | null | null |
4u1g | E | F | 0 | D | protein | null | reticulocyte binding protein 5 | IMMUNE SYSTEM | 07/15/14 | Plasmodium falciparum reticulocyte-binding protein homologue 5 (PfRH5) bound to monoclonal antibody QA1 | PLASMODIUM FALCIPARUM; ORYCTOLAGUS CUNICULUS | oryctolagus cuniculus | oryctolagus cuniculus | plasmodium falciparum | Wright, K.E., Hjerrild, K.A., Bartlett, J., Douglas, A.D., Jin, J., Brown, R.E., Ashfield, R., Clemmensen, S.B., de Jongh, W.A., Draper, S.J., Higgins, M.K. | 3.1 | X-RAY DIFFRACTION | 0.281 | 0.236 | false | true | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
2mmx | null | A | 10 | null | null | null | null | IMMUNE SYSTEM | 03/20/14 | NMR study of 6aJL2 | HOMO SAPIENS | null | homo sapiens | null | Amero, C., Maya-Martinez, R.C., Gil-Rodriguez, P.C. | NOT | SOLUTION NMR | null | null | false | true | null | IGLV6 | Lambda | null | null | null | null | null |
5y9f | N | M | 0 | B | protein | null | heavy chain of fab fragment of antibody 28f10 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/24/17 | Crystal structure of HPV59 pentamer in complex with the Fab fragment of antibody 28F10 | HUMAN PAPILLOMAVIRUS TYPE 59; MUS MUSCULUS | mus musculus | mus musculus | human papillomavirus type 59 | Li, S.W., Li, Z.H. | 3.35 | X-RAY DIFFRACTION | 0.261 | 0.230 | false | false | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
5o0w | F | null | 0 | B | protein | null | fructose-bisphosphate aldolase | LYASE | 05/17/17 | Crystal structure of the complex between Nb474 and Trypanosoma congolense fructose-1,6-bisphosphate aldolase | TRYPANOSOMA CONGOLENSE (STRAIN IL3000); VICUGNA PACOS | vicugna pacos | null | trypanosoma congolense (strain il3000) | Pinto, J., Magez, S., Sterckx, Y. | 2.57 | X-RAY DIFFRACTION | 0.222 | 0.192 | false | true | IGHV1 | null | null | 0 | -13.822203 | SPR | null | TBD |
7a25 | D | null | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 08/16/20 | Cryo-EM structure of the SARS-CoV-2 spike protein bound to neutralizing sybodies (Sb23) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; SYNTHETIC CONSTRUCT | synthetic construct | null | severe acute respiratory syndrome coronavirus2 | Hallberg, B.M., Das, H. | 3.06 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
6ldv | H | L | 0 | P | peptide | null | gly-m3l-gly-gly-thr-tyr-pro | IMMUNE SYSTEM | 11/23/19 | Structure antibody F9 in complex with methylated peptide | ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT | oryctolagus cuniculus | oryctolagus cuniculus | homo sapiens | Caaveiro, J.M.M., Tsumoto, K. | 1.9 | X-RAY DIFFRACTION | 0.229 | 0.179 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6zxn | D | null | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 07/30/20 | Cryo-EM structure of the SARS-CoV-2 spike protein bound to neutralizing nanobodies (Ty1) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; VICUGNA PACOS | vicugna pacos | null | severe acute respiratory syndrome coronavirus2 | Hallberg, B.M., Das, H. | 2.93 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
4wht | G | H | 0 | g | peptide | null | unknown | VIRAL PROTEIN | 09/23/14 | Structure of the Hepatitis C virus envelope glycoprotein E2 antigenic region 412-423 bound to the broadly neutralizing antibody 3/11, P1 crystal form | HEPATITIS C VIRUS; RATTUS NORVEGICUS | rattus norvegicus | rattus norvegicus | hepatitis c virus | Krey, T., Rey, F.A. | 2.22 | X-RAY DIFFRACTION | 0.243 | 0.209 | false | true | IGHV5 | IGKV2 | Kappa | 0 | -11.053614 | Unknown | null | TBD |
7qnw | H | L | 0 | E | protein | null | surface glycoprotein | VIRAL PROTEIN | 12/23/21 | The receptor binding domain of SARS-CoV-2 Omicron variant spike glycoprotein in complex with Beta-55 and EY6A Fabs | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Ren, J., Stuart, D.I. | 2.4 | X-RAY DIFFRACTION | 0.247 | 0.206 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
2uud | J | K | 0 | T | peptide | null | nq10-1.12 anti-phox antibody | IMMUNE SYSTEM | 03/02/07 | Crystal structure of the TEPC15-Vk45.1 anti-2-phenyl-5-oxazolone NQ10- 1.12 scFv in complex with the hapten | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Scotti, C., Gherardi, E. | 2.9 | X-RAY DIFFRACTION | 0.297 | 0.228 | false | true | IGHV7 | IGKV1 | Kappa | null | null | null | null | null |
6udk | H | L | 0 | K | protein | null | rc1 variant of hiv-1 env glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 09/19/19 | HIV-1 bNAb 1-55 in complex with modified BG505 SOSIP-based immunogen RC1 and 10-1074 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Abernathy, M.E., Barnes, C.O., Gristick, H.B., Bjorkman, P.J. | 3.9 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null |
3u9u | C | D | 0 | null | null | null | null | Transferase | 10/19/11 | Crystal Structure of Extracellular Domain of Human ErbB4/Her4 in complex with the Fab fragment of mAb1479 | MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | null | Hollmen, M., Liu, P., Wildiers, H., Reinvall, I., Vandorpe, T., Smeets, A., Deraedt, K., Vahlberg, T., Joensuu, H., Leahy, D.J., Schoffski, P., Elenius, K. | 3.42 | X-RAY DIFFRACTION | 0.272 | 0.234 | false | true | IGHV8 | IGKV1 | Kappa | null | null | null | null | null |
6ztf | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 07/20/20 | Crystal Structure of the anti-human P-Cadherin Fab CQY684 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Rondeau, J.M., Lehmann, S. | 1.55 | X-RAY DIFFRACTION | 0.207 | 0.188 | false | true | IGHV6 | IGKV1 | Kappa | null | null | null | null | null |
5t3x | H | L | 0 | G | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/26/16 | 3.9 Angstrom Crystal Structure of a Fully and Natively Glycosylated BG505 SOSIP.664 HIV-1 Env Trimer in Complex with the Broadly Neutralizing Antibodies IOMA and 10-1074. | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Gristick, H.B., Bjorkman, P.J. | 3.9 | X-RAY DIFFRACTION | 0.331 | 0.296 | false | true | IGHV4 | unknown | unknown | null | null | null | null | null |
3tnn | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 09/01/11 | Crystal structure of N5-i5 Fab, an ADCC mediating and non-neutralizing CD4i anti-HIV- 1 antibody. | HOMO SAPIENS | homo sapiens | homo sapiens | null | Wu, X., Pazgier, M. | 1.95 | X-RAY DIFFRACTION | 0.245 | 0.198 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
5uk4 | s | null | 0 | S | protein | null | anti-vesicular stomatitis virus n vhh | Viral Protein/RNA/Immune System | 01/19/17 | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | VESICULAR STOMATITIS INDIANA VIRUS (STRAIN SAN JUAN); VICUGNA PACOS | vicugna pacos | null | vesicular stomatitis indiana virus (strain sanjuan) | Hanke, L., Knockenhauer, K.E., Ploegh, H.L., Schwartz, T.U. | 3.204 | X-RAY DIFFRACTION | 0.288 | 0.237 | false | false | IGHV1 | null | null | null | null | null | null | null |
4jqi | H | L | 0 | A | V | protein | peptide | NA | NA | beta-arrestin-1 | vasopressin v2 receptor phosphopeptide | SIGNALING PROTEIN | 03/20/13 | Structure of active beta-arrestin1 bound to a G protein-coupled receptor phosphopeptide | RATTUS NORVEGICUS; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | rattus norvegicus | | Shukla, A.K., Manglik, A., Kruse, A.C., Xiao, K., Reis, R.I., Tseng, W.C., Staus, D.P., Hilger, D., Uysal, S., Huang, L.H., Paduch, M., Shukla, P.T., Koide, A., Koide, S., Weis, W.I., Kossiakoff, A.A., Kobilka, B.K., Lefkowitz, R.J. | 2.6 | X-RAY DIFFRACTION | 0.247 | 0.201 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
2qtj | A | L | 8 | null | null | null | null | IMMUNE SYSTEM | 08/02/07 | Solution structure of human dimeric immunoglobulin A | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bonner, A., Furtado, P.B., Almogren, A., Kerr, M.A., Perkins, S.J. | NOT | SOLUTION SCATTERING | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
2rcj | R | S | 0 | null | null | null | null | IMMUNE SYSTEM | 09/20/07 | Solution structure of human Immunoglobulin M | HOMO SAPIENS | homo sapiens | homo sapiens | null | Perkins, S.J., Nealis, A.S., Sutton, B.J., Feinstein, A. | NOT | SOLUTION SCATTERING | null | null | false | false | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
4hjj | H | null | 0 | A | protein | null | interleukin-18 | IMMUNE SYSTEM | 10/12/12 | Structure Reveals Function of the Dual Variable Domain Immunoglobulin (DVD-Ig) Molecule | HOMO SAPIENS | homo sapiens | null | homo sapiens | Jakob, C.G., Edalji, R., Judge, R.A., DiGiammarino, E., Li, Y., Gu, J., Ghayur, T. | 2.1 | X-RAY DIFFRACTION | 0.220 | 0.184 | false | true | IGHV2 | null | null | 0 | -13.363971 | Unknown | null | TBD |
3upc | D | null | 0 | null | null | null | null | IMMUNE SYSTEM | 11/17/11 | A general strategy for the generation of human antibody variable domains with increased aggregation resistance | HOMO SAPIENS | homo sapiens | null | null | Dudgeon, K., Rouet, R., Kokmeijer, I., Langley, D.B., Christ, D. | 2.8 | X-RAY DIFFRACTION | 0.247 | 0.209 | false | true | IGHV3 | null | null | null | null | null | null | null |
6pzz | I | G | 0 | C | protein | null | neuraminidase | VIRAL PROTEIN/IMMUNE SYSTEM | 08/01/19 | CryoEM derived model of NA-80 Fab in complex with N9 Shanghai2 | INFLUENZA A VIRUS (A/ENVIRONMENT/SHANGHAI/S1439/2013(H7N9)); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus(a/environment/shanghai/s1439/2013(h7n9)) | Ward, A.B., Turner, H.L., Zhu, X. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
4k07 | null | E | 0 | null | null | null | null | IMMUNE SYSTEM | 04/03/13 | Crystal structure of the amyloid-forming immunoglobulin AL-103 cis-proline 95 mutant | HOMO SAPIENS | null | homo sapiens | null | Thompson, J.R., Berkholz, D.S., Mahlum, E.W., Ramirez-Alvarado, M. | 2.83 | X-RAY DIFFRACTION | 0.236 | 0.202 | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
3etb | G | g | 0 | K | protein | null | anthrax protective antigen | IMMUNE SYSTEM/TOXIN | 10/07/08 | Crystal structure of the engineered neutralizing antibody M18 complexed with anthrax protective antigen domain 4 | MUS MUSCULUS; BACILLUS ANTHRACIS | mus musculus | null | bacillus anthracis | Monzingo, A.F., Leysath, C.E., Barnett, J., Iverson, B.L., Georgiou, G., Robertus, J.D. | 3.8 | X-RAY DIFFRACTION | 0.276 | 0.232 | true | true | unknown | unknown | unknown | 0 | -14.26 | SPR | 25 | 19361425 |
6jri | H | null | 0 | null | null | null | null | ANTIVIRAL PROTEIN | 04/04/19 | Crystal structure of Nanobody | VICUGNA PACOS | vicugna pacos | null | null | Mo, X., Li, J., Xu, X., Yuan, A.Y. | 3.101 | X-RAY DIFFRACTION | 0.259 | 0.235 | false | true | IGHV1 | null | null | null | null | null | null | null |
2bx5 | null | G | 0 | null | null | null | null | ANTIBODY | 07/22/05 | Is FR1 the antibody's Achillies heel | ESCHERICHIA COLI | null | null | null | James, L.C. | 2.7 | X-RAY DIFFRACTION | 0.290 | 0.250 | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
5n2k | P | O | 0 | null | null | null | null | IMMUNE SYSTEM | 02/07/17 | Structure of unbound Briakinumab FAb | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bloch, Y., Savvides, S.N. | 2.219 | X-RAY DIFFRACTION | 0.234 | 0.204 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
3i02 | B | A | 0 | A | carbohydrate | KDA | polysaccharide | IMMUNE SYSTEM | 06/24/09 | Crystal structure of S54-10 antibody in complex with antigen Kdo(2.4)Kdo(2.4)Kdo | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Brooks, C.L., Muller-Loennies, S., Borisova, S.N., Brade, L., Kosma, P., Hirama, T., MacKenzie, C.R., Brade, H., Evans, S.V. | 2.6 | X-RAY DIFFRACTION | 0.268 | 0.211 | false | false | IGHV7 | IGKV8 | Kappa | 0 | -10.263043 | Unknown | null | TBD |
5mv3 | O | P | 0 | Q | peptide | null | synthetic peptide containing the cii583-591 epitope ofcollagen type ii,collagen alpha-1(ii) chain,synthetic peptide containing the cii583-591 epitope of collagen type ii, | IMMUNE SYSTEM | 01/15/17 | ACC1 Fab fragment in complex with CII583-591 (CG10) | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | mus musculus | Dobritzsch, D., Holmdahl, R., Ge, C. | 2.95 | X-RAY DIFFRACTION | 0.261 | 0.202 | false | false | IGHV6 | IGKV3 | Kappa | null | null | null | null | null |
7qnd | M | null | 0 | D | protein | null | gamma-aminobutyric acid receptor subunit beta-3 | MEMBRANE PROTEIN | 12/20/21 | Cryo-EM structure of human full-length extrasynaptic beta3delta GABA(A)R in complex with THIP (gaboxadol), histamine and nanobody Nb25 | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Sente, A., Desai, R., Naydenova, K., Malinauskas, T., Jounaidi, Y., Miehling, J., Zhou, X., Masiulis, S., Hardwick, S.W., Chirgadze, D.Y., Miller, K.W., Aricescu, A.R. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
6apc | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/17/17 | Crystal Structure of Infant Antibody ADI-19425 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Gilman, M.S.A., McLellan, J.S. | 1.7 | X-RAY DIFFRACTION | 0.204 | 0.174 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
7mno | K | M | 0 | B | protein | null | e3 sumo-protein ligase ranbp2 | TRANSFERASE/Immune System | 05/01/21 | Crystal structure of the N-terminal domain of NUP358/RanBP2 (residues 1-752) I656V mutant in complex with Fab fragment | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Bley, C.J., Nie, S., Mobbs, G.W., Petrovic, S., Gres, A.T., Liu, X., Mukherjee, S., Harvey, S., Huber, F.M., Lin, D.H., Brown, B., Tang, A.W., Rundlet, E.J., Correia, A.R., Chen, S., Regmi, S.G., Stevens, T.A., Jette, C.A., Dasso, M., Patke, A., Palazzo, A.F., Kossiakoff, A.A., Hoelz, A. | 6.73 | X-RAY DIFFRACTION | 0.254 | 0.205 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7l56 | F | G | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/Immune System | 12/21/20 | Cryo-EM structure of the SARS-CoV-2 spike glycoprotein bound to Fab 2-43 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Rapp, M., Shapiro, L. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
5wux | A | B | 0 | F | protein | null | tumor necrosis factor alpha | IMMUNE SYSTEM | 12/21/16 | TNFalpha-certolizumab Fab | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Heo, Y.S., Lee, J.U. | 2.9 | X-RAY DIFFRACTION | 0.266 | 0.226 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -14.409486 | SPR | null | TBD |
7jtf | A | B | 0 | E | protein | null | envelope glycoprotein e2 | IMMUNE SYSTEM/VIRAL PROTEIN | 08/17/20 | Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody RM2-01 | MACACA MULATTA; RECOMBINANT HEPATITIS C VIRUS HK6A/JFH-1 | macaca mulatta | macaca mulatta | recombinant hepatitis c virus hk6a/jfh-1 | Tzarum, N., Wilson, I.A., Law, M. | 3.35 | X-RAY DIFFRACTION | 0.296 | 0.242 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7uar | D | E | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 03/13/22 | Structure of the SARS-CoV-2 S 6P trimer in complex with the neutralizing antibody Fab fragment, C1717 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Barnes, C.O. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
5hdb | E | F | 0 | C | protein | null | integrin alpha-iib | MEMBRANE PROTEIN/IMMUNE SYSTEM | 01/05/16 | Integrin alphaIIbbeta3 in complex with Ro-435054 | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Lin, F.Y. | 2.7012 | X-RAY DIFFRACTION | 0.238 | 0.212 | false | true | IGHV14 | IGKV14 | Kappa | null | null | null | null | null |
1rei | null | A | 0 | null | null | null | null | IMMUNOGLOBULIN(PART)SEQUESTERS ANTIGENS | 03/17/76 | THE MOLECULAR STRUCTURE OF A DIMER COMPOSED OF THE VARIABLE PORTIONS OF THE BENCE-JONES PROTEIN REI REFINED AT 2.0 ANGSTROMS RESOLUTION | HOMO SAPIENS | null | homo sapiens | null | Epp, O., Lattman, E.E., Colman, P., Fehlhammer, H., Bode, W., Schiffer, M., Huber, R., Palm, W. | 2.0 | X-RAY DIFFRACTION | unknown | unknown | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
2j6e | I | M | 0 | B | protein | null | ig gamma-1 chain c region | IMMUNE SYSTEM | 09/28/06 | Crystal Structure of an Autoimmune Complex between a Human IgM Rheumatoid Factor and IgG1 Fc reveals a Novel Fc Epitope and Evidence for Affinity Maturation | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Duquerroy, S., Stura, E.A., Bressanelli, S., Browne, H., Beale, D., Hamon, M., Casali, P., Vaney, M.-C., Rey, F.A., Sutton, B.J., Taussig, M.J. | 3.0 | X-RAY DIFFRACTION | 0.2877 | 0.2234 | false | true | IGHV4 | IGLV1 | Lambda | 0.000001 | -8.48812 | Unknown | null | TBD |
1k4c | A | B | 0 | C | protein | null | potassium channel kcsa | MEMBRANE PROTEIN | 10/07/01 | Potassium Channel KcsA-Fab complex in high concentration of K+ | STREPTOMYCES LIVIDANS; MUS MUSCULUS | mus musculus | mus musculus | streptomyces lividans | Zhou, Y., Morais-Cabral, J.H., Kaufman, A., MacKinnon, R. | 2.0 | X-RAY DIFFRACTION | 0.233 | 0.218 | false | false | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
6qf6 | A | a | 0 | null | null | null | null | APOPTOSIS | 01/09/19 | Structure of an E.coli expressed anti-Mcl1 scFv | HOMO SAPIENS | homo sapiens | null | null | Luptak, J. | 2.59 | X-RAY DIFFRACTION | 0.262 | 0.181 | true | true | unknown | unknown | unknown | null | null | null | null | null |
6y9a | H | L | 0 | A | B | protein | protein | NA | NA | b-lymphocyte antigen cd20 | b-lymphocyte antigen cd20 | MEMBRANE PROTEIN | 03/06/20 | Structure of full-length CD20 in complex with Obinutuzumab Fab | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | homo sapiens | Kumar, A., Reyes, N. | 4.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV2 | Kappa | null | null | null | null | null |
5w9j | E | F | 0 | D | protein | null | spike glycoprotein | VIRAL PROTEIN | 06/23/17 | MERS S ectodomain trimer in complex with variable domain of neutralizing antibody G4 | MIDDLE EAST RESPIRATORY SYNDROME-RELATED CORONAVIRUS; MUS MUSCULUS | mus musculus | mus musculus | middle east respiratory syndrome-relatedcoronavirus | Pallesen, J., Ward, A.B. | 4.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6mb3 | B | M | 0 | E | protein | null | plasmodium falciparum recombinant shortened csp | IMMUNE SYSTEM | 08/29/18 | Cryo-EM structure of the circumsporozoite protein of Plasmodium falciparum with a vaccine-elicited antibody reveals maturation of inter-antibody contacts | PLASMODIUM FALCIPARUM; HOMO SAPIENS | homo sapiens | homo sapiens | plasmodium falciparum | Cottrell, C.A., Torres, J.L., Ward, A.B. | 3.37 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
7q9j | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 11/12/21 | Beta-26 fab in complex with SARS-CoV-2 beta-Spike glycoprotein | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Duyvesteyn, H.M.E., Ren, J., Stuart, D.I. | 4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGLV3 | Lambda | null | null | null | null | null |
6ey0 | H | null | 0 | D | protein | null | t9ss component cytoplasmic membrane protein porm | PROTEIN TRANSPORT | 11/10/17 | N-terminal part (residues 30-212) of PorM with the llama naobody nb01 | PORPHYROMONAS GINGIVALIS; LAMA GLAMA | lama glama | null | porphyromonas gingivalis | Leone, P., Roche, J., Cambillau, C., Roussel, A. | 2.4 | X-RAY DIFFRACTION | 0.242 | 0.213 | false | true | IGHV1 | null | null | null | null | null | null | null |
7dha | C | B | 0 | A | protein | null | adp-ribosyl cyclase/cyclic adp-ribose hydrolase 1 | IMMUNE SYSTEM | 11/13/20 | crystal structure of CD38 in complex with daratumumab | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Lee, H.T., Heo, Y.S. | 2.55 | X-RAY DIFFRACTION | 0.261 | 0.207 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
4hlz | I | J | 0 | D | C | protein | protein | NA | NA | hemagglutinin ha2 | hemagglutinin ha1 | VIRAL PROTEIN/IMMUNE SYSTEM | 10/17/12 | Crystal Structure of Fab C179 in Complex with a H2N2 influenza virus hemagglutinin | INFLUENZA A VIRUS; MUS MUSCULUS | mus musculus | mus musculus | influenza a virus | influenza a virus | Dreyfus, C., Wilson, I.A. | 2.9 | X-RAY DIFFRACTION | 0.284 | 0.228 | false | true | IGHV7 | IGKV12 | Kappa | 0 | -11.867518 | BLI | null | TBD |
7lez | Q | O | 0 | M | J | protein | protein | NA | NA | arginase-1 | arginase-1 | HYDROLASE/IMMUNE SYSTEM | 01/15/21 | Trimeric human Arginase 1 in complex with mAb1 - 2 hArg:2 mAb1 complex | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | homo sapiens | Gomez-Llorente, Y., Scapin, G., Palte, R.L. | 4.15 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7we7 | K | N | 0 | G | protein | null | spike glycoprotein | IMMUNE SYSTEM/VIRAL PROTEIN | 12/23/21 | SARS-CoV-2 Omicron variant spike protein in complex with Fab XGv282 | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Wang, X., Wang, L. | 3.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
7c2s | G | H | 0 | B | protein | null | envelope protein | VIRUS | 05/09/20 | Helical reconstruction of Dengue virus serotype 3 complexed with Fab C10 | HOMO SAPIENS; DENGUE VIRUS 3 | homo sapiens | homo sapiens | dengue virus 3 | Morrone, S., Chew, S.V., Lim, X.N., Ng, T.S., Kostyuchenko, V.A., Zhang, S., Lok, S.M. | 10.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
5m15 | C | null | 0 | A | protein | null | maltose-binding periplasmic protein | IMMUNE SYSTEM | 10/07/16 | Synthetic nanobody in complex with MBP | ESCHERICHIA COLI K-12; SYNTHETIC CONSTRUCT | synthetic construct | null | escherichia coli k-12 | Zimmermann, I., Egloff, P., Seeger, M.A. | 1.9 | X-RAY DIFFRACTION | 0.257 | 0.209 | false | true | IGHV1 | null | null | null | null | null | null | null |
6a67 | C | D | 0 | B | protein | null | hemagglutinin | IMMUNE SYSTEM | 06/26/18 | Crystal structure of influenza A virus H5 hemagglutinin globular head in complex with the Fab of antibody FLD21.140 | HOMO SAPIENS; INFLUENZA A VIRUS (A/THAILAND/1(KAN-1)/2004(H5N1)) | homo sapiens | homo sapiens | influenza a virus (a/thailand/1(kan-1)/2004(h5n1)) | Wang, P., Zuo, Y., Sun, J., Zhang, L., Wang, X. | 2.33 | X-RAY DIFFRACTION | 0.235 | 0.197 | false | true | IGHV4 | IGLV1 | Lambda | 0 | -12.275832 | SPR | null | TBD |
4r7d | M | N | 0 | null | null | null | null | IMMUNE SYSTEM | 08/27/14 | Fab Hu 15C1 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Loyau, J., Didelot, G., Malinge, P., Ravn, U., Magistrelli, G., Depoisier, J.F., Kosco-Vilbois, M., Fischer, N., Thore, S., Rousseau, F. | 2.753 | X-RAY DIFFRACTION | 0.209 | 0.177 | false | true | IGHV4 | IGKV6 | Kappa | null | null | null | null | null |
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