pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
7zwm | G | H | 0 | F | protein | null | gametocyte surface protein p45/48 | CELL ADHESION | 05/19/22 | Pfs48/45 central and C-terminal domains bound to Fab fragments of monoclonal antibody 10D8 and 32F3 | Mus musculus; Plasmodium falciparum | mus musculus | mus musculus | plasmodium falciparum | Ko, K.T., Lennartz, F.L., Higgins, M.K. | 3.69 | X-RAY DIFFRACTION | 0.280 | 0.255 | false | true | IGHV5 | IGKV4 | Kappa | null | null | null | null | null |
7p5w | H | null | 0 | B | protein | null | volume-regulated anion channel subunit lrrc8a | MEMBRANE PROTEIN | 07/15/21 | Structure of homomeric LRRC8A Volume-Regulated Anion Channel in complex with synthetic nanobody Sb2 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | synthetic construct | null | mus musculus | Deneka, D., Rutz, S., Sawicka, M. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
2r0l | H | L | 0 | A | protein | null | hepatocyte growth factor activator | HYDROLASE, IMMUNE SYSTEM | 08/20/07 | Short Form HGFA with Inhibitory Fab75 | HOMO SAPIENS; HOMO SAPIENS, SYNTHETIC CONSTRUCT; SYNTHETIC CONSTRUCT | null | null | homo sapiens | Eigenbrot, C., Shia, S. | 2.2 | X-RAY DIFFRACTION | 0.248 | 0.193 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -10.68 | SPR | 25 | 18077410 |
6iuv | C | D | 0 | B | protein | null | hemagglutinin | IMMUNE SYSTEM | 11/30/18 | Crystal structure of influenza A virus H5 hemagglutinin globular head in complex with the Fab of antibody 3C11 | INFLUENZA A VIRUS (A/HONG KONG/482/97(H5N1)); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus (a/hong kong/482/97(h5n1)) | Wang, P., Zuo, Y., Sun, J., Zhang, L., Wang, X. | 2.332 | X-RAY DIFFRACTION | 0.246 | 0.207 | false | true | IGHV5 | IGKV2 | Kappa | null | null | null | null | null |
6uuh | C | D | 0 | D | carbohydrate | NAG | N-ACETYL-D-GLUCOSAMINE | IMMUNE SYSTEM | 10/30/19 | Crystal structure of broad and potent HIV-1 neutralizing antibody 438-B11 | HOMO SAPIENS; STREPTOCOCCUS SP. 'GROUP G' | homo sapiens | homo sapiens | homo sapiens | Kumar, S., Wilson, I.A. | 2.7 | X-RAY DIFFRACTION | 0.260 | 0.227 | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null |
4rfe | E | F | 0 | null | null | null | null | IMMUNE SYSTEM | 09/25/14 | Crystal structure of ADCC-potent ANTI-HIV-1 Rhesus macaque antibody JR4 Fab | MACACA MULATTA | macaca mulatta | macaca mulatta | null | Wu, X., Gohain, N., Tolbert, W.D., Pazgier, M. | 1.91 | X-RAY DIFFRACTION | 0.246 | 0.192 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
7czx | H | K | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 09/09/20 | S protein of SARS-CoV-2 in complex bound with P5A-1B9 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q. | 2.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
2g75 | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 02/27/06 | Crystal Structure of anti-SARS m396 Antibody | HOMO SAPIENS | homo sapiens | homo sapiens | null | Prabakaran, P., Gan, J.H., Feng, Y., Zhu, Z.Y., Xiao, X.D., Ji, X., Dimitrov, D.S. | 2.28 | X-RAY DIFFRACTION | 0.277 | 0.221 | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null |
5x2q | H | L | 0 | A | B | protein | protein | NA | NA | taste receptor, type 1, member 2a | taste receptor, type 1, member 3 | SIGNALING PROTEIN/IMMUNE SYSTEM | 02/02/17 | Crystal structure of the medaka fish taste receptor T1r2a-T1r3 ligand binding domains in complex with glycine | ORYZIAS LATIPES; MUS MUSCULUS | mus musculus | mus musculus | oryzias latipes | oryzias latipes | Nuemket, N., Yasui, N., Atsumi, N., Yamashita, A. | 2.6 | X-RAY DIFFRACTION | 0.230 | 0.154 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
4q0x | H | L | 0 | E | peptide | null | envelope glycoprotein e2 | IMMUNE SYSTEM/VIRAL PROTEIN | 04/02/14 | Crystal structure of non-neutralizing antibody in complex with Epitope II of HCV E2 | HEPATITIS C VIRUS; MUS MUSCULUS | mus musculus | mus musculus | hepatitis c virus | Deng, L., Zhang, P. | 2.9 | X-RAY DIFFRACTION | 0.285 | 0.221 | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7pi7 | E | F | 0 | D | protein | null | cysteine-rich protective antigen | IMMUNE SYSTEM | 08/19/21 | PfCyRPA bound to monoclonal antibody Cy.002 Fab fragment | PLASMODIUM FALCIPARUM (ISOLATE 3D7); GALLUS GALLUS | gallus gallus | gallus gallus | plasmodium falciparum (isolate 3d7) | Ragotte, R.J., Higgins, M.K. | 2.72 | X-RAY DIFFRACTION | 0.301 | 0.273 | false | true | IGHV14 | IGKV3 | Kappa | null | null | null | null | null |
1lmk | G | g | 0 | null | null | null | null | IMMUNOGLOBULIN | 08/29/94 | THE STRUCTURE OF A BIVALENT DIABODY | MUS MUSCULUS | mus musculus | null | null | Williams, R.L. | 2.6 | X-RAY DIFFRACTION | unknown | 0.200 | true | true | unknown | unknown | unknown | null | null | null | null | null |
7q9m | H | L | 0 | C | protein | null | surface glycoprotein | Viral Protein/Immune System | 11/12/21 | Beta-53 fab in complex with SARS-CoV-2 beta-Spike glycoprotein | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Duyvesteyn, H.M.E., Ren, J., Stuart, D.I. | 3.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
6xob | S | T | 0 | K | protein | null | togavirin | Virus/Immune System | 07/06/20 | CryoEM structure of Eastern Equine Encephalitis (EEEV) VLP with Fab EEEV-143. | EASTERN EQUINE ENCEPHALITIS VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | eastern equine encephalitis virus | Binshtein, E., Crowe, J.E. | 8.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
6y1k | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 02/12/20 | Crystal structure of the unmodified A.17 antibody FAB fragment - L47R mutant | HOMO SAPIENS | homo sapiens | homo sapiens | null | Chatziefthimiou, S., Stepanova, A., Mokrushina, Y., Smirnov, I., Gabibov, A., Wilmanns, M. | 1.65 | X-RAY DIFFRACTION | 0.217 | 0.185 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
6vy2 | I | M | 0 | C | protein | null | glycoprotein 120 | IMMUNE SYSTEM | 02/25/20 | Cryo-EM structure of M1214_N1 Fab in complex with CH505 TF chimeric SOSIP.664 Env trimer | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Chan, K.-W., Kong, X.P. | 4.86 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
3iy6 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 04/09/09 | Variable domains of the computer generated model (WAM) of Fab E fitted into the cryoEM reconstruction of the virus-Fab E complex | RATTUS NORVEGICUS | rattus norvegicus | rattus norvegicus | null | Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G. | 12 | ELECTRON MICROSCOPY | null | null | false | false | IGHV2 | IGKV6 | Kappa | null | null | null | null | null |
1maj | null | A | 3 | null | null | null | null | IMMUNOGLOBULIN | 09/16/93 | SOLUTION STRUCTURE OF AN ISOLATED ANTIBODY VL DOMAIN | MUS MUSCULUS | null | mus musculus | null | Constantine, K.L., Friedrichs, M.S., Metzler, W.J., Wittekind, M., Hensley, P., Mueller, L. | NOT | SOLUTION NMR | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
6mam | E | F | 0 | H | G | protein | protein | NA | NA | envelope glycoprotein | envelope glycoprotein | Viral protein/immune system | 08/28/18 | Cleaved Ebola GP in complex with a broadly neutralizing human antibody, ADI-15946 | HOMO SAPIENS; ZAIRE EBOLAVIRUS (STRAIN MAYINGA-76) | homo sapiens | homo sapiens | zaire ebolavirus (strain mayinga-76) | zaire ebolavirus (strain mayinga-76) | West, B.R., Moyer, C.L., Fusco, M.L., Saphire, E.O. | 4.1 | X-RAY DIFFRACTION | 0.281 | 0.262 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4tsb | H | L | 0 | A | protein | null | lysozyme c | Immune system/hydrolase | 06/18/14 | Structure of a lysozyme antibody complex | HOMO SAPIENS; GALLUS GALLUS | homo sapiens | homo sapiens | gallus gallus | Wensley, B. | 1.95 | X-RAY DIFFRACTION | 0.227 | 0.194 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
7pg8 | L | J | 0 | C | protein | null | ion transport protein,voltage-gated sodium channel | MEMBRANE PROTEIN | 08/13/21 | NaV_Ae1/Sp1CTD_pore-ANT05 complex | HOMO SAPIENS; ALKALILIMNICOLA EHRLICHII MLHE-1; RUEGERIA POMEROYI DSS-3 | homo sapiens | homo sapiens | alkalilimnicola ehrlichii mlhe-1, ruegeriapomeroyi dss-3 | Lolicato, M., Arrigoni, C. | 4.5 | X-RAY DIFFRACTION | 0.352 | 0.303 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
2a9n | H | L | 0 | H | Hapten | ORE | 4-(2,7-DIFLUORO-6-HYDROXY-3-OXO-3H-XANTHEN-9-YL)ISOPHTHALIC ACID | Immune System | 07/12/05 | A Mutation Designed to Alter Crystal Packing Permits Structural Analysis of a Tight-binding Fluorescein-scFv complex | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Cambillau, C., Spinelli, S., Honegger, A., Pluckthun, A. | 3.0 | X-RAY DIFFRACTION | 0.266 | 0.217 | true | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
2qr0 | F | E | 0 | C | protein | null | vascular endothelial growth factor a | IMMUNE SYSTEM | 07/27/07 | Structure of VEGF complexed to a Fab containing TYR and SER in the CDRs | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Wiesmann, C. | 3.5 | X-RAY DIFFRACTION | 0.312 | 0.291 | false | false | IGHV3 | IGKV1 | Kappa | 0 | -11.5 | SPR | 37 | 17825836 |
2nxz | D | C | 0 | A | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 11/20/06 | HIV-1 gp120 Envelope Glycoprotein (T257S, S334A, S375W) Complexed with CD4 and Antibody 17b | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Zhou, T., Xu, L., Dey, B., Hessell, A.J., Van Ryk, D., Xiang, S.H., Yang, X., Zhang, M.Y., Zwick, M.B., Arthos, J., Burton, D.R., Dimitrov, D.S., Sodroski, J., Wyatt, R., Nabel, G.J., Kwong, P.D. | 2.04 | X-RAY DIFFRACTION | 0.244 | 0.206 | false | true | IGHV1 | IGKV3 | Kappa | 0.000001 | null | SPR | null | 17301785 |
1pg7 | Z | Y | 0 | null | null | null | null | IMMUNE SYSTEM | 05/27/03 | Murine 6A6 Fab in complex with humanized anti-Tissue Factor D3H44 Fab | SYNTHETIC CONSTRUCT; MUS MUSCULUS | mus musculus | mus musculus | null | Eigenbrot, C., Meng, Y.G., Krishnamurthy, R., Lipari, M.T., Presta, L., Devaux, B., Wong, T., Moran, P., Bullens, S., Kirchhofer, D. | 2.5 | X-RAY DIFFRACTION | 0.265 | 0.217 | false | false | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
4n1e | null | E | 0 | K | protein | null | lysozyme c | Immune system/Hydrolase | 10/04/13 | Structural evidence for antigen receptor evolution | HOMO SAPIENS; GALLUS GALLUS | null | homo sapiens | gallus gallus | Langley, D.B., Rouet, R., Stock, D., Christ, D. | 2.23 | X-RAY DIFFRACTION | 0.265 | 0.223 | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
6h3h | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 07/18/18 | Fab fragment of antibody against fullerene C60 | MUS MUSCULUS | mus musculus | mus musculus | null | Osipov, E.M., Tikhonova, T.V. | 1.92 | X-RAY DIFFRACTION | 0.234 | 0.188 | false | false | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
6qd6 | D | null | 0 | null | null | null | null | STRUCTURAL PROTEIN | 12/31/18 | Molecular scaffolds expand the nanobody toolkit for cryo-EM applications: crystal structure of Mb-cHopQ-Nb207 | HELICOBACTER PYLORI; HELICOBACTER PYLORI (STRAIN G27) | helicobacter pylori, helicobacter pylori(strain g27) | null | null | Uchanski, T., Masiulis, S., Fischer, B., Kalichuk, V., Wohlkonig, A., Zogg, T., Remaut, H., Vranken, W., Aricescu, A.R., Pardon, E., Steyaert, J. | 2.84 | X-RAY DIFFRACTION | 0.239 | 0.204 | false | true | IGHV1 | null | null | null | null | null | null | null |
3ijy | B | A | 0 | B | carbohydrate | KDA | polysaccharide | IMMUNE SYSTEM | 08/05/09 | Structure of S67-27 in Complex with Kdo(2.8)Kdo | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | mus musculus | Brooks, C.L., Blackler, R.J., Evans, S.V. | 2.85 | X-RAY DIFFRACTION | 0.284 | 0.237 | false | false | IGHV7 | IGKV8 | Kappa | 0.000001 | -8.241342 | Unknown | null | TBD |
7r40 | E | G | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 02/08/22 | Structure of the SARS-CoV-2 spike glycoprotein in complex with the 87G7 antibody Fab fragment | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Hurdiss, D.L. | 2.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
7f9z | E | e | 0 | A | protein | null | engineered g-alpha-q | MEMBRANE PROTEIN | 07/05/21 | GHRP-6-bound ghrelin receptor in complex with Gq | HOMO SAPIENS; MUS MUSCULUS; LAMA GLAMA; SYNTHETIC CONSTRUCT | mus musculus | null | homo sapiens | Wang, Y., Zhuang, Y., Xu, P., Xu, H.E., Jiang, Y. | 3.2 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
3c2a | H | L | 0 | P | peptide | null | envelope glycoprotein | IMMUNE SYSTEM | 01/24/08 | Antibody Fab fragment 447-52D in complex with UG1033 peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | null | Dhillon, A.K., Stanfield, R.L., Wilson, I.A. | 2.1 | X-RAY DIFFRACTION | 0.298 | 0.240 | false | false | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
6tyl | C | null | 0 | A | protein | null | resistance to inhibitors of cholinesterase 8 homolog a (c.elegans) | SIGNALING PROTEIN | 08/09/19 | Crystal structure of mammalian Ric-8A:Galpha(i):nanobody complex | RATTUS NORVEGICUS; LAMA GLAMA | lama glama | null | rattus norvegicus | Mou, T.C., McClelland, L., Yates-Hansen, C., Sprang, S.R. | 3.3 | X-RAY DIFFRACTION | 0.287 | 0.248 | false | true | IGHV1 | null | null | null | null | null | null | null |
7urq | H | L | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN/Immune System | 04/22/22 | Crystal Structure of SARS-CoV-2 S delta variant receptor-binding domain (RBD) in complex CoV11 Fab crystal form 1 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Tolbert, W.D., Pazgier, M. | 2.05 | X-RAY DIFFRACTION | 0.208 | 0.177 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
6d0u | E | F | 0 | A | protein | null | hemagglutinin | ANTIVIRAL PROTEIN | 04/11/18 | Crystal structure of C05 V110P/A117E mutant bound to H3 influenza hemagglutinin, HA1 subunit | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | Wu, N.C., Wilson, I.A. | 3.25 | X-RAY DIFFRACTION | 0.268 | 0.254 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5icz | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 02/23/16 | Cetuximab Fab in complex with GQFDLSTRRLKG peptide | MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT | mus musculus, homo sapiens | mus musculus, homo sapiens | null | Bzymek, K.P., Williams, J.C. | 2.55 | X-RAY DIFFRACTION | 0.221 | 0.171 | false | true | IGHV2 | IGKV5 | Kappa | 0.000005 | -7.231899 | Unknown | null | TBD |
6sc6 | C | null | 0 | A | protein | null | e3 ubiquitin-protein ligase rnf31 | LIGASE | 07/23/19 | dAb3/HOIP-RBR apo structure | HOMO SAPIENS; SYNTHETIC CONSTRUCT | synthetic construct | null | homo sapiens | Tsai, Y.-C.I., House, D., Rittinger, K. | 2.25 | X-RAY DIFFRACTION | 0.246 | 0.199 | false | true | IGHV3 | null | null | null | null | null | null | null |
6cdi | q | r | 0 | d | protein | null | unknown | VIRAL PROTEIN | 02/08/18 | Cryo-EM structure at 3.6 A resolution of vaccine-elicited antibody vFP16.02 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Xu, K., Liu, K., Carragher, B., Potter, C.S., Kwong, P.D. | 3.6 | ELECTRON MICROSCOPY | null | null | false | false | unknown | IGKV3 | Kappa | null | null | null | null | null |
7m7h | C | D | 0 | A | protein | null | eryai,6-deoxyerythronolide-b synthase erya3, modules 5 and6 chimera | BIOSYNTHETIC PROTEIN/IMMUNE SYSTEM | 03/28/21 | 6-Deoxyerythronolide B synthase (DEBS) module 1 in complex with antibody fragment 1B2: State 1' | SACCHAROPOLYSPORA ERYTHRAEA; HOMO SAPIENS | homo sapiens | homo sapiens | saccharopolyspora erythraea | Cogan, D.P., Zhang, K., Chiu, W., Khosla, C. | 4.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
7zfc | M | null | 0 | E | protein | null | spike protein s1 | VIRAL PROTEIN | 04/01/22 | SARS-CoV-2 Beta RBD in complex with nanobody C1, Omi-18 and Omi-31 Fabs | HOMO SAPIENS; LAMA GLAMA; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | lama glama | null | severe acute respiratory syndrome coronavirus2 | Zhou, D., Huo, J., Ren, J., Stuart, D.I. | 3.24 | X-RAY DIFFRACTION | 0.299 | 0.244 | false | true | IGHV1 | null | null | null | null | null | null | null |
7q9j | J | K | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 11/12/21 | Beta-26 fab in complex with SARS-CoV-2 beta-Spike glycoprotein | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Duyvesteyn, H.M.E., Ren, J., Stuart, D.I. | 4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGLV3 | Lambda | null | null | null | null | null |
6ddr | B | A | 0 | C | protein | null | mhc class i polypeptide-related sequence a | IMMUNE SYSTEM | 05/10/18 | Crystal Structure Analysis of the Epitope of an Anti-MICA Antibody | MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | homo sapiens | Matsumoto, M.L. | 1.9 | X-RAY DIFFRACTION | 0.247 | 0.208 | false | true | IGHV1 | IGKV12 | Kappa | 0 | -12.314857 | ITC | null | TBD |
5uty | D | E | 0 | B | protein | null | hiv-1 bg505 strain env gp41 | VIRAL PROTEIN/immune system | 02/15/17 | Crystal Structure of a Stabilized DS-SOSIP.mut4 BG505 gp140 HIV-1 Env Trimer, Containing Mutations I201C-P433C (DS), L154M, N300M, N302M, T320L in Complex with Human Antibodies PGT122 and 35O22 at 4.1 Angstrom | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Xu, K., Chuang, G.-Y., Pancera, M., Kwong, P.D. | 3.412 | X-RAY DIFFRACTION | 0.288 | 0.241 | false | true | unknown | unknown | unknown | null | null | null | null | null |
6vmk | u | t | 0 | v | protein | null | unknown | HYDROLASE/IMMUNE SYSTEM | 01/28/20 | Crystal structure of human Complement Factor D with anti-Factor D Fab 20D12 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Wu, P., Harris, S.F., Eigenbrot, C. | 3.01 | X-RAY DIFFRACTION | 0.215 | 0.174 | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6n1w | 8 | 7 | 0 | C | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN | 11/12/18 | Cryo-EM structure at 4.2 A resolution of vaccine-elicited antibody DFPH-a.15 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Kwong, P.D. | 4.2 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
3o45 | A | B | 0 | C | peptide | null | fusion glycoprotein f1 | IMMUNE SYSTEM/VIRAL PROTEIN | 07/26/10 | Crystal Structure of 101F Fab Bound to 17-mer Peptide Epitope | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | null | McLellan, J.S., Chen, M., Chang, J.S., Yang, Y., Kim, A., Graham, B.S., Kwong, P.D. | 2.872 | X-RAY DIFFRACTION | 0.254 | 0.200 | false | true | IGHV8 | IGKV3 | Kappa | null | null | null | null | null |
6wg2 | I | M | 0 | P | peptide | null | npna4 peptide | IMMUNE SYSTEM | 04/04/20 | Crystal structure of Fab239 in complex with NPNA4 peptide from circumsporozoite protein | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | plasmodium falciparum | Pholcharee, T., Oyen, D., Wilson, I.A. | 2.534 | X-RAY DIFFRACTION | 0.246 | 0.195 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5nj3 | C | D | 0 | B | protein | null | atp-binding cassette sub-family g member 2 | TRANSPORT PROTEIN | 03/28/17 | Structure of an ABC transporter: complete structure | MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | homo sapiens | Taylor, N.M.I., Manolaridis, I., Jackson, S.M., Kowal, J., Stahlberg, H., Locher, K.P. | 3.78 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV13 | Kappa | null | null | null | null | null |
6oz6 | E | null | 0 | A | protein | null | phospho-n-acetylmuramoyl-pentapeptide-transferase | MEMBRANE PROTEIN/TRANSFERASE | 05/15/19 | Crystal structure of MraY bound to 3'-hydroxymureidomycin A | LAMA GLAMA; AQUIFEX AEOLICUS (STRAIN VF5) | lama glama | null | aquifex aeolicus (strain vf5) | Mashalidis, E.H., Lee, S.Y. | 3.7 | X-RAY DIFFRACTION | 0.301 | 0.257 | false | true | IGHV1 | null | null | null | null | null | null | null |
5xqy | null | D | 0 | null | null | null | null | IMMUNE SYSTEM | 06/07/17 | Structure of monomeric mutant of REI immunoglobulin light chain variable domain crystallized at pH 8 | HOMO SAPIENS | null | homo sapiens | null | Mine, S., Nakamura, T., Uegaki, K., Hamada, D. | 2.9 | X-RAY DIFFRACTION | 0.285 | 0.231 | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
7buf | G | I | 0 | B | protein | null | dengue virus serotype 2 e protein | VIRUS | 05/13/20 | Cryo-EM structure of Dengue virus serotype 2 complexed with SIgN-3C IgG | HOMO SAPIENS; DENGUE VIRUS 2 | homo sapiens | homo sapiens | dengue virus 2 | Zhang, S., Chew, S.V., Lim, X.N., Ng, T.S., Kostyuchenko, V.A., Lok, S.M. | 6.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6ol7 | M | N | 0 | null | null | null | null | IMMUNE SYSTEM | 04/15/19 | Crystal structure of glVRC01 scFv in complex with anti-idiotype iv8 scFv | MUS MUSCULUS; HOMO SAPIENS | homo sapiens | homo sapiens | null | Weidle, C., Pancera, M. | 2.419 | X-RAY DIFFRACTION | 0.224 | 0.174 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5o03 | C | null | 0 | A | protein | null | capsid protein | VIRAL PROTEIN | 05/16/17 | GII.10 Vietnam 026 protruding domain in complex with Nanobody Nano-32 | NORWALK VIRUS; NOROVIRUS | norovirus | null | norwalk virus | Koromyslova, A.D., Hansman, G.H. | 2.194 | X-RAY DIFFRACTION | 0.193 | 0.172 | false | true | IGHV1 | null | null | 0 | -9.852364 | ITC | null | TBD |
7sob | H | J | 0 | D | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 10/29/21 | SARS-CoV-2 S B.1.617.1 kappa variant + S309 + S2L20 Global Refinement | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 2.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
4zyp | J | L | 0 | C | protein | null | fusion glycoprotein f0,fibritin | IMMUNE SYSTEM | 05/21/15 | Crystal Structure of Motavizumab and Quaternary-Specific RSV-Neutralizing Human Antibody AM14 in Complex with Prefusion RSV F Glycoprotein | MUS MUSCULUS; HUMAN RESPIRATORY SYNCYTIAL VIRUS A (STRAIN A2); HOMO SAPIENS | mus musculus | mus musculus | human respiratory syncytial virus a (straina2), enterobacteria phage t4 | Gilman, M.S.A., McLellan, J.S. | 5.5 | X-RAY DIFFRACTION | 0.277 | 0.211 | false | true | IGHV2 | IGKV1 | Kappa | null | null | null | null | null |
4uif | I | J | 0 | E | protein | null | dengue virus serotype 2 strain pvp94 07 - envelopeprotein | null | 03/30/15 | Cryo-EM structure of Dengue virus serotype 2 in complex with antigen- binding fragments of human antibody 2D22 | DENGUE VIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | dengue virus 2 | Fibriansah, G., Ibarra, K.D., Ng, T.-S., Smith, S.A., Tan, J.L., Lim, X.-N., Ooi, J.S.G., Kostyuchenko, V.A., Wang, J., de Silva, A.M., Harris, E., Crowe Junior, J.E., Lok, S.-M. | 6.5 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
3ixt | A | B | 0 | C | peptide | null | fusion glycoprotein f1 | IMMUNE SYSTEM | 09/04/09 | Crystal Structure of Motavizumab Fab Bound to Peptide Epitope | MUS MUSCULUS; HUMAN RESPIRATORY SYNCYTIAL VIRUS | mus musculus | mus musculus | human respiratory syncytial virus | McLellan, J.S., Chen, M., Kim, A., Yang, Y., Graham, B.S., Kwong, P.D. | 2.75 | X-RAY DIFFRACTION | 0.274 | 0.213 | false | true | IGHV2 | IGKV1 | Kappa | 0 | -9.02 | SPR | null | 20098425 |
1dbk | H | L | 0 | H | Hapten | ANO | 5-BETA-ANDROSTANE-3,17-DIONE | IMMUNOGLOBULIN | 08/24/93 | MOLECULAR BASIS OF CROSS-REACTIVITY AND THE LIMITS OF ANTIBODY-ANTIGEN COMPLEMENTARITY | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Arevalo, J.H., Wilson, I.A. | 3.0 | X-RAY DIFFRACTION | unknown | 0.213 | false | true | IGHV9 | IGKV1 | Kappa | null | null | null | null | null |
5ja8 | H | null | 0 | G | protein | null | toxin higb-2 | TOXIN | 04/12/16 | Crystal structure of the HigB2 toxin in complex with Nb2 | LAMA GLAMA; VIBRIO CHOLERAE SEROTYPE O1 (STRAIN ATCC 39315 / EL TOR INABA N16961) | lama glama | null | vibrio cholerae serotype o1 (strain atcc 39315/ el tor inaba n16961) | Hadzi, S., Loris, R. | 2.49 | X-RAY DIFFRACTION | 0.248 | 0.201 | false | true | IGHV1 | null | null | null | null | null | null | null |
6xmi | B | A | 0 | C | peptide | null | terminase, large subunit | VIRAL PROTEIN, IMMUNE SYSTEM | 06/30/20 | Structure of Fab4 bound to P22 TerL(1-33) | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | salmonella phage p22 | Cingolani, G., Lokareddy, R., Ko, Y. | 1.51 | X-RAY DIFFRACTION | 0.203 | 0.167 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4plk | J | K | 0 | E | protein | null | capsid protein | VIRAL PROTEIN/IMMUNE SYSTEM | 05/18/14 | Hepatitis E Virus E2s domain (Genotype I) in complex with a neutralizing antibody 8G12 | HEPATITIS E VIRUS; MUS MUSCULUS | mus musculus | mus musculus | hepatitis e virus | Tang, X.H., Li, S.W., Sivaraman, J. | 4.0 | X-RAY DIFFRACTION | 0.296 | 0.264 | false | false | IGHV1 | IGKV12 | Kappa | null | null | null | null | null |
7t3d | H | L | 0 | B | protein | null | hemagglutinin ha2 chain | Viral Protein/IMMUNE SYSTEM | 12/07/21 | CryoEM map of anchor 222-1C06 Fab and lateral patch 2B05 Fab binding H1 HA | INFLUENZA A VIRUS (A/CALIFORNIA/04/2009(H1N1)); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus (a/california/04/2009(h1n1)) | Han, J., Ward, A.B. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
3cdc | null | B | 0 | null | null | null | null | IMMUNE SYSTEM | 02/26/08 | kI O18/O8 N34I/Y87H immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Baden, E.M., Randles, E.G., Thompson, J.R., Ramirez-Alvarado, M. | 1.53 | X-RAY DIFFRACTION | 0.231 | 0.189 | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
6c6x | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 01/19/18 | Crystal structure of Middle-East Respiratory Syndrome (MERS) coronavirus neutralizing antibody JC57-14 isolated from a vaccinated rhesus macaque. | MACACA MULATTA | macaca mulatta | macaca mulatta | null | Joyce, M.G., Mascola, J.R., Graham, B.S., Kwong, P.D. | 1.99 | X-RAY DIFFRACTION | 0.208 | 0.176 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
7n8i | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 06/14/21 | SARS-CoV-2 S (B.1.429 / epsilon variant) + S2M11 + S2L20 (Local Refinement of the NTD/S2L20) | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | McCallum, M., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D. | 3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7ora | D | E | 0 | C | protein | null | spike protein s1 | VIRAL PROTEIN | 06/04/21 | Crystal structure of the T478K mutant receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-45 and COVOX-253 Fabs | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Ren, J., Stuart, D.I. | 2.6 | X-RAY DIFFRACTION | 0.245 | 0.204 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7djy | D | null | 0 | null | null | null | null | BIOSYNTHETIC PROTEIN | 11/22/20 | Clec4f Nanobody 322 | LAMIUM MACULATUM | lamium maculatum | null | null | Wen, Y., Zheng, F. | 2.7 | X-RAY DIFFRACTION | 0.266 | 0.228 | false | true | IGHV1 | null | null | null | null | null | null | null |
7nk1 | F | null | 0 | null | null | null | null | VIRAL PROTEIN | 02/17/21 | 1918 Influenza virus polymerase heterotirmer in complex with vRNA promoters and Nb8201 | INFLUENZA A VIRUS (A/BREVIG MISSION/1/1918(H1N1)); INFLUENZA A VIRUS (STRAIN A/BREVIG MISSION/1/1918 H1N1); STAPHYLOCOCCUS AUREUS; CAMELIDAE MIXED LIBRARY; SYNTHETIC CONSTRUCT | camelidae mixed library | null | null | Keown, J.R., Carrique, L., Fodor, E., Grimes, J.M. | 4.22 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7czt | I | M | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 09/09/20 | S protein of SARS-CoV-2 in complex bound with P5A-2G9 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q. | 2.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV5 | Lambda | null | null | null | null | null |
6zer | F | G | 0 | D | protein | null | rbd | VIRAL PROTEIN/IMMUNE SYSTEM | 06/16/20 | Crystal structure of receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with EY6A Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Zhao, Y., Fry, E.E., Ren, J., Stuart, D.I. | 3.8 | X-RAY DIFFRACTION | 0.251 | 0.212 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6b0w | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 09/15/17 | Crystal structure of the anti-circumsporozoite protein 1710 antibody | HOMO SAPIENS | homo sapiens | homo sapiens | null | Scally, S.W., Murugan, R., Bosch, A., Triller, G., Wardemann, H., Julien, J.P. | 1.9 | X-RAY DIFFRACTION | 0.218 | 0.183 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
1p2c | B | A | 0 | C | protein | null | lysozyme c | IMMUNE SYSTEM/HYDROLASE | 04/15/03 | crystal structure analysis of an anti-lysozyme antibody | MUS MUSCULUS; GALLUS GALLUS | mus musculus | mus musculus | gallus gallus | Cauerhff, A., Goldbaum, F.A., Braden, B.C. | 2.0 | X-RAY DIFFRACTION | 0.242 | 0.204 | false | false | IGHV1 | IGKV5 | Kappa | 0 | -13.65 | SPR | 25 | 14988501 |
6j7w | B | null | 0 | D | peptide | null | tumor necrosis factor receptor superfamily member 17 | IMMUNE SYSTEM | 01/18/19 | Crystal Structure of Human BCMA in complex with UniAb(TM) VH | HOMO SAPIENS | homo sapiens | null | homo sapiens | Clarke, S.C., Ma, B., Trinklein, N.D., Schellenberger, U., Osborn, M., Ouisse, L., Boudreau, A., Davison, L., Harris, K.E., Ugamraj, H., Balasubramani, A., Dang, K., Jorgensen, B., Ogana, H., Pham, D., Pratap, P., Sankaran, P., Anegon, I., van Schooten, W., Bruggemann, M., Buelow, R., Force Aldred, S. | 2.6 | X-RAY DIFFRACTION | 0.271 | 0.209 | false | true | IGHV3 | null | null | null | null | null | null | null |
1a0q | H | L | 0 | null | null | null | null | CATALYTIC ANTIBODY | 12/05/97 | 29G11 COMPLEXED WITH PHENYL [1-(1-N-SUCCINYLAMINO)PENTYL] PHOSPHONATE | MUS MUSCULUS | mus musculus | mus musculus | null | Buchbinder, J.L., Stephenson, R.C., Scanlan, T.S., Fletterick, R.J. | 2.3 | X-RAY DIFFRACTION | 0.275 | 0.203 | false | false | IGHV1 | IGKV19 | Kappa | null | null | null | null | null |
5m6a | null | A | 0 | null | null | null | null | IMMUNE SYSTEM | 10/24/16 | Crystal structure of cardiotoxic Bence-Jones light chain dimer H9 | HOMO SAPIENS | null | homo sapiens | null | Oberti, L., Rognoni, P., Bacarizo, J., Bolognesi, M., Ricagno, S. | 1.64 | X-RAY DIFFRACTION | 0.203 | 0.183 | false | false | null | IGLV2 | Lambda | null | null | null | null | null |
6eti | F | E | 0 | A | protein | null | atp-binding cassette sub-family g member 2 | MEMBRANE PROTEIN | 10/26/17 | Structure of inhibitor-bound ABCG2 | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Jackson, S.M., Manolaridis, I., Kowal, J., Zechner, M., Altmann, K.H., Locher, K.P. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV13 | Kappa | null | null | null | null | null |
3kyk | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 12/06/09 | Crystal structure of li33 Igg1 Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Silvian, L.F., Pepinsky, R.B., Walus, L. | 3.2 | X-RAY DIFFRACTION | 0.290 | 0.194 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
7q9p | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 11/12/21 | Beta-06 fab in complex with SARS-CoV-2 beta-Spike glycoprotein | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Duyvesteyn, H.M.E., Ren, J., Stuart, D.I. | 4.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null |
7k8m | A | B | 0 | E | protein | null | surface glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 09/27/20 | Crystal structure of an anti-SARS-CoV-2 human neutralizing antibody Fab fragment, C110 | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Jette, C.A., Barnes, C.O., Bjorkman, P.J. | 3.2 | X-RAY DIFFRACTION | 0.234 | 0.175 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
4npy | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 11/22/13 | Crystal structure of germline Fab PGT121, a putative precursor of the broadly reactive and potent HIV-1 neutralizing antibody | HOMO SAPIENS | homo sapiens | homo sapiens | null | Julien, J.-P., Diwanji, D.C., Wilson, I.A. | 1.796 | X-RAY DIFFRACTION | 0.220 | 0.182 | false | true | IGHV4 | IGLV3 | Lambda | null | null | null | null | null |
7bz5 | H | L | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 05/13/20 | Structure of COVID-19 virus spike receptor-binding domain complexed with a neutralizing antibody | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Wu, Y., Qi, J., Gao, F. | 1.84 | X-RAY DIFFRACTION | 0.191 | 0.167 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
2bx5 | null | O | 0 | null | null | null | null | ANTIBODY | 07/22/05 | Is FR1 the antibody's Achillies heel | ESCHERICHIA COLI | null | null | null | James, L.C. | 2.7 | X-RAY DIFFRACTION | 0.290 | 0.250 | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
6i3z | H | L | 0 | A | B | protein | peptide | NA | NA | alpha-1-antitrypsin | alpha-1-antitrypsin | PROTEIN BINDING | 11/08/18 | Fab fragment of an antibody selective for wild-type alpha-1-antitrypsin in complex with its antigen | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | homo sapiens | Laffranchi, M., Elliston, E.L.K., Miranda, E., Perez, J., Jagger, A.M., Fra, A., Lomas, D.A., Irving, J.A. | 3.1 | X-RAY DIFFRACTION | 0.307 | 0.261 | false | false | IGHV5 | IGKV14 | Kappa | null | null | null | null | null |
7nk8 | F | null | 0 | A | B | protein | protein | NA | NA | polymerase acidic protein | rna-directed rna polymerase catalytic subunit | VIRAL PROTEIN | 02/17/21 | 1918 H1N1 Viral influenza polymerase heterotrimer with Nb8205 core | CAMELIDAE MIXED LIBRARY; INFLUENZA A VIRUS (A/BREVIG MISSION/1/1918(H1N1)); INFLUENZA A VIRUS (STRAIN A/BREVIG MISSION/1/1918 H1N1); SYNTHETIC CONSTRUCT | camelidae mixed library | null | influenza a virus (a/brevigmission/1/1918(h1n1)) | influenza a virus (a/brevigmission/1/1918(h1n1)) | Keown, J.R., Carrique, L., Fodor, E., Grimes, J.M. | 5.34 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
4dkf | I | M | 0 | B | protein | null | interleukin-34 | CYTOKINE/IMMUNE SYSTEM | 02/03/12 | Crystal Structure of Human Interleukin-34 Bound to FAb2 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Ma, X., Chen, Y., Stawicki, S., Wu, Y., Bazan, J.F., Starovasnik, M.A. | 2.61 | X-RAY DIFFRACTION | 0.256 | 0.225 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -11.60786 | SPR | null | TBD |
6w03 | D | E | 0 | B | protein | null | envelope glycoprotein gp41 | VIRAL PROTEIN/IMMUNE SYSTEM | 02/28/20 | Crystal Structure of HIV-1 BG505 DS-SOSIP.3mut Prefusion Env Trimer in Complex with Human Antibodies 3H109L and 35O22 at 3.3 Angstrom | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Lai, Y.-T., Kwong, P.D. | 2.4 | X-RAY DIFFRACTION | 0.273 | 0.230 | false | true | unknown | unknown | unknown | null | null | null | null | null |
3gje | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 03/08/09 | Rational development of high-affinity T-cell receptor-like antibodies | HOMO SAPIENS | homo sapiens | homo sapiens | null | Stewart-Jones, G., Wadle, A., Hombach, A., Shenderov, E., Held, G., Fischer, E., Kleber, S., Stenner-Liewen, F., Bauer, S., McMichael, A., Knuth, A., Abken, H., Hombach, A.A., Cerundolo, V., Jones, E.Y., Renner, C. | 2.3 | X-RAY DIFFRACTION | 0.302 | 0.222 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
5da0 | B | null | 0 | A | protein | null | sulphate transporter | TRANSPORT PROTEIN | 08/19/15 | Structure of the the SLC26 transporter SLC26Dg in complex with a nanobody | DEINOCOCCUS GEOTHERMALIS (STRAIN DSM 11300); LAMA GLAMA | lama glama | null | deinococcus geothermalis (strain dsm 11300) | Dutzler, R., Geertsma, E.R., Chang, Y., Shaik, F.R. | 3.2 | X-RAY DIFFRACTION | 0.308 | 0.258 | false | true | IGHV1 | null | null | null | null | null | null | null |
5f7m | C | null | 0 | A | protein | null | adhesin binding fucosylated histo-blood group antigen | CELL ADHESION | 12/08/15 | Blood group antigen binding adhesin BabA of Helicobacter pylori strain 17875 in complex with blood group H Lewis b hexasaccharide | HELICOBACTER PYLORI; LAMA GLAMA | lama glama | null | helicobacter pylori | Moonens, K., Gideonsson, P., Subedi, S., Romao, E., Oscarson, S., Muyldermans, S., Boren, T., Remaut, H. | 2.72 | X-RAY DIFFRACTION | 0.218 | 0.179 | false | true | IGHV1 | null | null | null | null | null | null | null |
4zto | I | M | 0 | Q | peptide | null | epitope of rabbit monoclonal antibody r53 | IMMUNE SYSTEM | 05/14/15 | Fab/epitope complex structure of rabbit monoclonal antibody R53 targeting an epitope in HIV-1 gp120 C4 region | ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT | oryctolagus cuniculus | oryctolagus cuniculus | human immunodeficiency virus 1 | Pan, R., Kong, X.-P. | 2.3 | X-RAY DIFFRACTION | 0.223 | 0.167 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
5wdu | L | K | 0 | F | protein | null | envelope glycoprotein gp160 | IMMUNE SYSTEM | 07/06/17 | HIV-1 Env BG505 SOSIP.664 H72C-H564C trimer in complex with bNAbs PGT122 Fab, 35O22 Fab and NIH45-46 scFv | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Julien, J.-P., Torrents de la Pena, A., Sanders, R.W., Wilson, I.A. | 7.0 | X-RAY DIFFRACTION | 0.363 | 0.301 | false | true | IGHV4 | unknown | unknown | null | null | null | null | null |
5x2m | J | K | 0 | C | D | protein | protein | NA | NA | taste receptor, type 1, member 2a | taste receptor, type 1, member 3 | SIGNALING PROTEIN/IMMUNE SYSTEM | 02/02/17 | Crystal structure of the medaka fish taste receptor T1r2a-T1r3 ligand binding domains in complex with L-glutamine | ORYZIAS LATIPES; MUS MUSCULUS | mus musculus | mus musculus | oryzias latipes | oryzias latipes | Nuemket, N., Yasui, N., Atsumi, N., Yamashita, A. | 2.206 | X-RAY DIFFRACTION | 0.227 | 0.173 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
3iy7 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 04/09/09 | Variable domains of the computer generated model (WAM) of Fab F fitted into the cryoEM reconstruction of the virus-Fab F complex | RATTUS NORVEGICUS | rattus norvegicus | rattus norvegicus | null | Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G. | 14 | ELECTRON MICROSCOPY | null | null | false | false | IGHV2 | IGKV22 | Kappa | null | null | null | null | null |
3ghb | I | M | 0 | Q | peptide | null | envelope glycoprotein | IMMUNE SYSTEM | 03/03/09 | Crystal structure of anti-HIV-1 Fab 447-52D in complex with V3 peptide W2RW020 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | null | Kong, X.P., Burke, V.J. | 2.25 | X-RAY DIFFRACTION | 0.232 | 0.196 | false | false | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
2wzp | D | null | 0 | B | protein | null | putative receptor binding protein | VIRAL PROTEIN | 12/01/09 | Structures of Lactococcal Phage p2 Baseplate Shed Light on a Novel Mechanism of Host Attachment and Activation in Siphoviridae | LACTOCOCCUS PHAGE P2; LAMA GLAMA | lama glama | null | lactococcus phage p2 | Sciara, G., Bebeacua, C., Bron, P., Tremblay, D., Ortiz-Lombardia, M., Lichiere, J., van Heel, M., Campanacci, V., Moineau, S., Cambillau, C. | 2.6 | X-RAY DIFFRACTION | 0.2078 | 0.1789 | false | true | IGHV1 | null | null | null | null | null | null | null |
3cm9 | C | N | 6 | null | null | null | null | IMMUNE SYSTEM | 03/21/08 | Solution Structure of Human SIgA2 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bonner, A., Almogren, A., Furtado, P.B., Kerr, M.A., Perkins, S.J. | NOT | SOLUTION SCATTERING | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6o89 | H | null | 0 | null | null | null | null | IMMUNE SYSTEM | 03/09/19 | Anti-CD28xCD3 CODV Fab | HOMO SAPIENS | homo sapiens | null | null | Lord, D.M., Wei, R.R. | 2.09 | X-RAY DIFFRACTION | 0.222 | 0.178 | false | true | IGHV3 | null | null | null | null | null | null | null |
7k39 | H | G | 0 | A | B | protein | protein | NA | NA | hemagglutinin | hemagglutinin | VIRAL PROTEIN | 09/10/20 | Structure of full-length influenza HA with a head-binding antibody at pH 5.2, conformation A, neutral pH-like | INFLUENZA A VIRUS (STRAIN A/HONG KONG/1/1968 H3N2); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus (strain a/hong kong/1/1968h3n2) | influenza a virus (strain a/hong kong/1/1968h3n2) | Gui, M., Gao, J., Xiang, Y. | 3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
7aej | D | null | 0 | A | protein | null | envelope glycoprotein gp160,envelope glycoprotein gp160 | VIRAL PROTEIN | 09/17/20 | Crystal structure of asymmetric HIV-1 gp41 containing all membrane anchors | HUMAN IMMUNODEFICIENCY VIRUS 1; LAMA GLAMA | lama glama | null | human immunodeficiency virus 1 | Caillat, C., Guilligay, D., Weissenhorn, W. | 3.8 | X-RAY DIFFRACTION | 0.308 | 0.265 | false | true | IGHV1 | null | null | null | null | null | null | null |
4aq1 | D | null | 0 | null | null | null | null | STRUCTURAL PROTEIN | 04/12/12 | Structure of the SbsB S-layer protein of Geobacillus stearothermophilus PV72p2 in complex with nanobody KB6 | GEOBACILLUS STEAROTHERMOPHILUS; LAMA GLAMA | lama glama | null | null | Baranova, E., Remaut, H. | 2.42 | X-RAY DIFFRACTION | 0.23567 | 0.18301 | false | true | IGHV1 | null | null | null | null | null | null | null |
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