pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
3c6s | F | E | 0 | F | carbohydrate | RAM | polysaccharide | IMMUNE SYSTEM | 02/05/08 | Crystal structure of Fab F22-4 in complex with a Shigella flexneri 2a O-Ag pentadecasaccharide | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Saul, F.A., Vulliez-le-Normand, B., Bentley, G.A. | 1.8 | X-RAY DIFFRACTION | 0.251 | 0.191 | false | false | IGHV6 | IGKV2 | Kappa | null | null | null | null | null |
5m76 | null | B | 0 | null | null | null | null | IMMUNE SYSTEM | 10/26/16 | Crystal structure of cardiotoxic Bence-Jones light chain dimer H10 | HOMO SAPIENS | null | homo sapiens | null | Oberti, L., Rognoni, P., Bacarizo, J., Bolognesi, M., Ricagno, S. | 2.5 | X-RAY DIFFRACTION | 0.282 | 0.239 | false | false | null | unknown | unknown | null | null | null | null | null |
7nd9 | H | L | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN, IMMUNE SYSTEM | 01/30/21 | EM structure of SARS-CoV-2 Spike glycoprotein (one RBD up) in complex with COVOX-253H55L Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D. | 2.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6b3s | H | L | 0 | A | protein | null | epidermal growth factor receptor | TRANSFERASE/immune system | 09/23/17 | Crystal structure of the Fab fragment of necitumumab (Fab11F8) in complex with domain III from a cetuximab resistant variant of EGFR (sEGFRd3-S468R) | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Ferguson, K.M., Bagchi, A. | 2.8 | X-RAY DIFFRACTION | 0.245 | 0.208 | false | true | IGHV4 | IGKV3 | Kappa | 0 | -10.80593 | SPR | null | TBD |
1lk3 | H | L | 0 | A | protein | null | interleukin-10 | IMMUNE SYSTEM | 04/23/02 | ENGINEERED HUMAN INTERLEUKIN-10 MONOMER COMPLEXED TO 9D7 FAB FRAGMENT | HOMO SAPIENS; RATTUS NORVEGICUS | rattus norvegicus | rattus norvegicus | homo sapiens | Josephson, K., Jones, B.C., Walter, L.J., DiGiacomo, R., Indelicato, S.R., Walter, M.R. | 1.91 | X-RAY DIFFRACTION | 0.240 | 0.187 | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
1ieh | A | null | 9 | null | null | null | null | IMMUNE SYSTEM | 04/09/01 | SOLUTION STRUCTURE OF A SOLUBLE SINGLE-DOMAIN ANTIBODY WITH HYDROPHOBIC RESIDUES TYPICAL OF A VL/VH INTERFACE | LAMA GLAMA | lama glama | null | null | Vranken, W., Tolkatchev, D., Xu, P., Tanha, J., Chen, Z., Narang, S., Ni, F. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
4krm | J | null | 0 | I | protein | null | epidermal growth factor receptor | TRANSFERASE/IMMUNE SYSTEM | 05/16/13 | Nanobody/VHH domain 7D12 in complex with domain III of the extracellular region of EGFR, pH 3.5 | LAMA GLAMA; HOMO SAPIENS | lama glama | null | homo sapiens | Ferguson, K.M., Schmitz, K.R. | 2.655 | X-RAY DIFFRACTION | 0.244 | 0.208 | false | true | IGHV1 | null | null | null | null | null | null | null |
3t3m | E | F | 0 | C | protein | null | integrin alpha-iib | CELL ADHESION | 07/25/11 | A Novel High Affinity Integrin alphaIIbbeta3 Receptor Antagonist That Unexpectedly Displaces Mg2+ from the beta3 MIDAS | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Zhu, J., Zhu, J., Springer, T.A. | 2.6 | X-RAY DIFFRACTION | 0.222 | 0.179 | false | true | IGHV14 | IGKV14 | Kappa | null | null | null | null | null |
3cm9 | D | O | 3 | null | null | null | null | IMMUNE SYSTEM | 03/21/08 | Solution Structure of Human SIgA2 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bonner, A., Almogren, A., Furtado, P.B., Kerr, M.A., Perkins, S.J. | NOT | SOLUTION SCATTERING | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
5mo3 | H | L | 0 | A | peptide | null | microtubule-associated protein tau | IMMUNE SYSTEM | 12/13/16 | Crystal structure of DC8E8 Fab in the complex with a 14-mer tau peptide at pH 8.5 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Skrabana, R., Novak, M. | 1.69 | X-RAY DIFFRACTION | 0.235 | 0.189 | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
6x1t | G | I | 0 | R | peptide | null | nm23-1-ptza peptide | IMMUNE SYSTEM | 05/19/20 | Structure of pHis Fab (SC50-3) in complex with pHis mimetic peptide | ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT | oryctolagus cuniculus | oryctolagus cuniculus | synthetic construct | Kalagiri, R., Stanfield, R.L., Wilson, I.A., Hunter, T. | 2.34 | X-RAY DIFFRACTION | 0.269 | 0.244 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
1mcs | null | B | 0 | P | peptide | null | peptide n-acetyl-l-gln-d-phe-l-his-d-pro-oh | IMMUNOGLOBULIN | 02/25/93 | PRINCIPLES AND PITFALLS IN DESIGNING SITE DIRECTED PEPTIDE LIGANDS | HOMO SAPIENS | null | homo sapiens | null | Edmundson, A.B., Harris, D.L., Fan, Z.-C., Guddat, L.W. | 2.7 | X-RAY DIFFRACTION | unknown | unknown | false | true | null | IGLV2 | Lambda | null | null | null | null | null |
6cuf | H | L | 0 | D | protein | null | envelope glycoprotein gp41 | VIRAL PROTEIN | 03/26/18 | Cryo-EM structure at 4.2 A resolution of vaccine-elicited antibody vFP1.01 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | MUS MUSCULUS; HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | mus musculus | mus musculus | human immunodeficiency virus 1 | Acharya, P., Carragher, B., Potter, C.S., Kwong, P.D. | 4.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7p77 | X | null | 0 | E | protein | null | spike glycoprotein | VIRAL PROTEIN | 07/19/21 | SARS-CoV-2 spike protein in complex with sybody#15 and sybody#68 in a 3up conformation | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; SYNTHETIC CONSTRUCT | synthetic construct | null | severe acute respiratory syndrome coronavirus2 | Walter, J.D., Hutter, C.A.J., Garaeva, A.A., Scherer, M., Zimmermann, I., Wyss, M., Rheinberger, J., Ruedin, Y., Earp, J.C., Egloff, P., Sorgenfrei, M., Huerlimann, L.M., Gonda, I., Meier, G., Remm, S., Thavarasah, S., Zimmer, G., Slotboom, D.J., Paulino, C., Plattet, P., Seeger, M.A. | 2.98 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7rd5 | D | C | 0 | E | protein | null | tetraspanin-15 | CELL ADHESION | 07/09/21 | Crystal structure of Tspan15 large extracellular loop (Tspan15 LEL) in complex with 1C12 Fab | MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | homo sapiens | Lipper, C.H., Gabriel, K.H., Seegar, T.C.M., Durr, K.L., Tomlinson, M.G., Blacklow, S.C. | 3.6 | X-RAY DIFFRACTION | 0.309 | 0.271 | false | true | IGHV1 | IGKV15 | Kappa | null | null | null | null | null |
7lk9 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 02/01/21 | Crystal structure of SARS-CoV-2 RBD-targeting antibody COV107-23 HC + COVD21-C8 LC | HOMO SAPIENS | homo sapiens | homo sapiens | null | Yuan, M., Zhu, X., Wilson, I.A., Wu, N.C. | 3.4 | X-RAY DIFFRACTION | 0.312 | 0.276 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
3ztj | K | L | 0 | F | E | protein | protein | NA | NA | hemagglutinin ha2 chain | hemagglutinin ha1 chain | IMMUNE SYSTEM/VIRAL PROTEIN | 07/08/11 | Structure of influenza A neutralizing antibody selected from cultures of single human plasma cells in complex with human H3 Influenza haemagglutinin. | HOMO SAPIENS; INFLUENZA A VIRUS | homo sapiens | homo sapiens | influenza a virus | influenza a virus | Voss, J.E., Vachieri, S.G., Gamblin, S.J., Collins, P.J., Haire, L.F., Skehel, J.J. | 3.41 | X-RAY DIFFRACTION | 0.28434 | 0.23410 | false | true | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
6z43 | X | null | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 06/03/20 | Cryo-EM Structure of SARS-CoV-2 Spike : H11-D4 Nanobody Complex | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA GLAMA | lama glama | null | severe acute respiratory syndrome coronavirus2 | Ruza, R.R., Duyvesteyn, H.M.E., Shah, P., Carrique, L., Ren, J., Malinauskas, T., Zhou, D., Stuart, D.I., Naismith, J.H. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
6nc2 | O | T | 0 | I | C | protein | protein | NA | NA | amc011 v4.2 sosip gp41 | amc011 v4.2 sosip gp120 | IMMUNE SYSTEM | 12/10/18 | AMC011 v4.2 SOSIP Env trimer in complex with fusion peptide targeting antibody ACS202 fragment antigen binding | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Cottrell, C.A., Ozorowski, G., Yuan, M., Copps, J., Wilson, I.A., Ward, A.B. | 5.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7n05 | H | L | 0 | E | peptide | null | hiv-1 gp41 immunodominant region | IMMUNE SYSTEM | 05/25/21 | Crystal structure of the F240 antibody fragment bound to the HIV-1 gp41 immunodominant region | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | hiv-1 06tg.ht008 | Cook, J.D., Lee, J.E. | 1.7 | X-RAY DIFFRACTION | 0.204 | 0.172 | false | true | unknown | IGKV4 | Kappa | null | null | null | null | null |
6t9e | H | L | 0 | D | protein | null | unknown | IMMUNE SYSTEM | 10/28/19 | Crystal structure of a bispecific DutaFab in complex with human PDGF | HOMO SAPIENS | null | null | null | Kimbung, R., Logan, D.T., Beckmann, R., Jensen, K., Speck, J., Fenn, S., Kettenberger, H. | 2.989 | X-RAY DIFFRACTION | 0.304 | 0.253 | false | false | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7mlh | E | D | 0 | B | protein | null | der p 2 variant 3 | ALLERGEN/IMMUNE SYSTEM | 04/28/21 | Crystal structure of human IgE (2F10) in complex with Der p 2.0103 | HOMO SAPIENS; DERMATOPHAGOIDES PTERONYSSINUS | homo sapiens | homo sapiens | dermatophagoides pteronyssinus | Khatri, K., Kapingidza, A.B., Richardson, C.M., Vailes, L.D., Wunschmann, S., Dolamore, C., Chapman, M.D., Smith, S.A., Pomes, A., Chruszcz, M. | 2.1 | X-RAY DIFFRACTION | 0.247 | 0.210 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6b0n | H | L | 0 | G | protein | null | envelope glycoprotein gp140 | Viral protein/immune system | 09/14/17 | Crystal structure of the cleavage-independent prefusion HIV Env glycoprotein trimer of the clade A BG505 isolate (NFL construct) in complex with Fabs PGT122 and PGV19 at 3.39 A | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Sarkar, A., Irimia, A., Wilson, I.A. | 3.4 | X-RAY DIFFRACTION | 0.346 | 0.335 | false | true | IGHV4 | unknown | unknown | null | null | null | null | null |
3ijh | D | C | 0 | C | carbohydrate | KO2 | PROP-2-EN-1-YL D-GLYCERO-ALPHA-D-TALO-OCT-2-ULOPYRANOSIDONIC ACID | IMMUNE SYSTEM | 08/04/09 | Structure of S67-27 in Complex with Ko | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Brooks, C.L., Blackler, R.J., Evans, S.V. | 2.1 | X-RAY DIFFRACTION | 0.254 | 0.213 | false | false | IGHV7 | IGKV8 | Kappa | 0.0001 | -5.456976 | Unknown | null | TBD |
3mj8 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 04/12/10 | Crystal structure of HL4E10 Fab, a hamster Ab stimulatory for gammadelta T cells | CRICETULUS MIGRATORIUS | cricetulus migratorius | cricetulus migratorius | null | Verdino, P., Wilson, I.A. | 2.94 | X-RAY DIFFRACTION | 0.281 | 0.227 | false | false | IGHV2 | IGLV3 | Lambda | null | null | null | null | null |
6csf | H | L | 0 | M | protein | null | sodium/alanine symporter agcs | MEMBRANE PROTEIN | 03/20/18 | Crystal structure of sodium/alanine symporter AgcS with D-alanine bound | METHANOCOCCUS MARIPALUDIS (STRAIN S2 / LL); MUS MUSCULUS | mus musculus | mus musculus | methanococcus maripaludis (strain s2 / ll) | Ma, J., Reyes, F.E., Gonen, T. | 3.3 | X-RAY DIFFRACTION | 0.253 | 0.240 | false | false | IGHV6 | IGKV12 | Kappa | null | null | null | null | null |
4rnr | A | B | 0 | B | carbohydrate | NAG | N-ACETYL-D-GLUCOSAMINE | IMMUNE SYSTEM | 10/24/14 | Crystal structure of broadly neutralizing anti-HIV antibody PGT130 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Kong, L., Wilson, I.A. | 2.758 | X-RAY DIFFRACTION | 0.269 | 0.244 | false | true | IGHV4 | IGLV2 | Lambda | null | null | null | null | null |
6bp2 | H | L | 0 | A | protein | null | envelope glycoprotein | VIRAL PROTEIN/immune system | 11/21/17 | Therapeutic human monoclonal antibody MR191 bound to a marburgvirus glycoprotein | MARBURG MARBURGVIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | marburg marburgvirus | King, L.B., Fusco, M.L., Flyak, A.I., Ilinykh, P.A., Huang, K., Gunn, B., Kirchdoerfer, R.N., Hastie, K.M., Sangha, A.K., Meiler, J., Alter, G., Bukreyev, A., Crowe, J.E.J., Saphire, E.O. | 3.172 | X-RAY DIFFRACTION | 0.284 | 0.252 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
6txz | K | O | 0 | D | protein | null | hepatitis a virus cellular receptor 2 | IMMUNE SYSTEM | 04/08/20 | FAB PART OF M6903 IN COMPLEX WITH HUMAN TIM3 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Musil, D., Sood, V. | 3.06 | X-RAY DIFFRACTION | 0.253 | 0.197 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
7the | B | C | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 01/10/22 | Structure of RBD directed antibody DH1042 in complex with SARS-CoV-2 spike: Local refinement of RBD-Fab interface | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | May, A.J., Manne, K., Acharya, P. | 3.79 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
3k81 | B | null | 0 | C | protein | null | mp18 rna editing complex protein | Immune System, RNA Binding Protein | 10/13/09 | Structure of the central interaction protein from the Trypanosoma brucei editosome in complex with single domain antibodies | TRYPANOSOMA BRUCEI; LAMA GLAMA | lama glama | null | trypanosoma brucei | Park, Y.-J., Hol, W. | 3.4 | X-RAY DIFFRACTION | 0.320 | 0.267 | false | true | IGHV1 | null | null | null | null | null | null | null |
7nvn | n | null | 0 | e | protein | null | unknown | CHAPERONE | 03/15/21 | Human TRiC complex in closed state with nanobody and tubulin bound | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Kelly, J.J., Chi, G., Bulawa, C., Paavilainen, V.O., Bountra, C., Huiskonen, J.T., Yue, W. | 3 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | null | null | null | null | null | null | null |
5hgg | S | null | 0 | B | protein | null | urokinase-type plasminogen activator | HYDROLASE/INHIBITOR | 01/08/16 | Crystal structure of uPA in complex with a camelid-derived antibody fragment | VICUGNA PACOS; HOMO SAPIENS | vicugna pacos | null | homo sapiens | Yung, K.W.Y., Kromann-Hansen, T., Andreasen, P.A., Ngo, J.C.K. | 1.97 | X-RAY DIFFRACTION | 0.196 | 0.167 | false | true | IGHV1 | null | null | 0 | -14.007521 | SPR | null | TBD |
3ifo | H | L | 0 | P | peptide | null | amyloid beta a4 protein | IMMUNE SYSTEM | 07/24/09 | X-ray structure of amyloid beta peptide:antibody (Abeta1-7:10D5) complex | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Weis, W.I., Feinberg, H., Basi, G.S., Schenk, D. | 2.15 | X-RAY DIFFRACTION | 0.218 | 0.162 | false | true | IGHV8 | IGKV1 | Kappa | 0 | -9.9 | SPR | 25 | 19923222 |
5veb | A | B | 0 | X | protein | null | cadherin-6 | IMMUNE SYSTEM | 04/04/17 | Crystal structure of a Fab binding to extracellular domain 5 of Cadherin-6 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Zhu, X., Bialucha, C.U., London, A., Clark, K., Hu, T. | 2.34 | X-RAY DIFFRACTION | 0.252 | 0.212 | false | false | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6pdx | M | N | 0 | B | protein | null | hemagglutinin | IMMUNE SYSTEM | 06/19/19 | Crystal structure of C585 Fab in complex with influenza virus hemagglutinin from A/Switzerland/9715293/2013 (H3N2) | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | Qiu, Y., Zhou, Y. | 3.993 | X-RAY DIFFRACTION | 0.242 | 0.212 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
5f7n | D | null | 0 | B | protein | null | adhesin binding fucosylated histo-blood group antigen | CELL ADHESION | 12/08/15 | Blood group antigen binding adhesin BabA of Helicobacter pylori strain 17875 in complex with blood group A Lewis b pentasaccharide | HELICOBACTER PYLORI | helicobacter pylori | null | helicobacter pylori | Moonens, K., Gideonsson, P., Subedi, S., Romao, E., Oscarson, S., Muyldermans, S., Boren, T., Remaut, H. | 2.28 | X-RAY DIFFRACTION | 0.197 | 0.171 | false | true | IGHV1 | null | null | null | null | null | null | null |
3qum | K | M | 0 | Q | protein | null | prostate-specific antigen | IMMUNE SYSTEM | 02/24/11 | Crystal structure of human prostate specific antigen (PSA) in Fab sandwich with a high affinity and a PCa selective antibody | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Stura, E.A., Muller, B.H., Michel, S., Ducancel, F. | 3.2 | X-RAY DIFFRACTION | 0.294 | 0.198 | false | false | IGHV1 | IGKV2 | Kappa | null | null | null | null | null |
3qo1 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 02/09/11 | Monoclinic form of IgG1 Fab fragment (apo form) sharing same Fv as IgA | HOMO SAPIENS | homo sapiens | homo sapiens | null | Trajtenberg, F., Correa, A., Buschiazzo, A. | 2.4 | X-RAY DIFFRACTION | 0.224 | 0.166 | false | false | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
3bd3 | null | A | 0 | null | null | null | null | IMMUNE SYSTEM | 11/14/07 | Crystal structure of single domain VL of an anti-DNA binding antibody 3D8 scFv and its active site revealed by complex structures of a small molecule and metals | MUS MUSCULUS | null | mus musculus | null | Park, S.K., Kim, J.S. | 1.6 | X-RAY DIFFRACTION | 0.270 | 0.229 | true | true | null | IGKV8 | Kappa | null | null | null | null | null |
5jrp | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 05/06/16 | crystal structure of monoclonal antibody MR78 Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Dong, J., Crowe, J. | 2.0 | X-RAY DIFFRACTION | 0.194 | 0.171 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
4r7n | S | T | 0 | null | null | null | null | IMMUNE SYSTEM | 08/28/14 | Fab C2E3 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Loyau, J., Didelot, G., Malinge, P., Ravn, U., Magistrelli, G., Depoisier, J.F., Kosco-Vilbois, M., Fischer, N., Thore, S., Rousseau, F. | 3.45 | X-RAY DIFFRACTION | 0.280 | 0.236 | false | true | IGHV4 | IGKV6 | Kappa | null | null | null | null | null |
4r7n | G | H | 0 | null | null | null | null | IMMUNE SYSTEM | 08/28/14 | Fab C2E3 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Loyau, J., Didelot, G., Malinge, P., Ravn, U., Magistrelli, G., Depoisier, J.F., Kosco-Vilbois, M., Fischer, N., Thore, S., Rousseau, F. | 3.45 | X-RAY DIFFRACTION | 0.280 | 0.236 | false | true | IGHV4 | IGKV6 | Kappa | null | null | null | null | null |
4qth | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 07/08/14 | Crystal structure of anti-uPAR Fab 8B12 | MUS MUSCULUS | mus musculus | mus musculus | null | Zhao, B., Yuan, C., Luo, Z., Huang, M. | 2.17 | X-RAY DIFFRACTION | 0.273 | 0.229 | false | false | IGHV1 | IGKV9 | Kappa | null | null | null | null | null |
7kgu | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 10/18/20 | Structure of 2Q1-Fab, an antibody selective for IDH2R140Q-HLA-B*07:02 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Miller, M.S., Aytenfisu, T.Y., Wright, K.M., Gabelli, S.B. | 2.4 | X-RAY DIFFRACTION | 0.269 | 0.208 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5w9h | H | I | 0 | G | protein | null | mers s | VIRAL PROTEIN | 06/23/17 | MERS S ectodomain trimer in complex with variable domain of neutralizing antibody G4 | MIDDLE EAST RESPIRATORY SYNDROME-RELATED CORONAVIRUS; MUS MUSCULUS | mus musculus | mus musculus | middle east respiratory syndrome-relatedcoronavirus | Pallesen, J., Ward, A.B. | 4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
2dqj | H | L | 0 | Y | protein | null | lysozyme c | IMMUNE SYSTEM/HYDROLASE | 05/26/06 | Crystal structure of hyhel-10 FV (wild-type) complexed with hen egg lysozyme at 1.8A resolution | MUS MUSCULUS; GALLUS GALLUS | mus musculus | mus musculus | gallus gallus | Shiroishi, M., Kondo, H., Tsumoto, K., Kumagai, I. | 1.8 | X-RAY DIFFRACTION | 0.219 | 0.194 | false | true | IGHV3 | IGKV5 | Kappa | null | null | null | null | null |
7n28 | X | Y | 0 | F | protein | null | envelope glycoprotein gp120 | IMMUNE SYSTEM/VIRAL PROTEIN | 05/28/21 | Cryo-EM structure of broadly neutralizing V2-apex-targeting antibody J033 in complex with HIV-1 Env | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS; MACACA MULATTA | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | Zhou, T., Gao, F. | 4.2 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
5od0 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 07/04/17 | Crystal structure of ACPA E4 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Dobritzsch, D., Ge, C., Holmdahl, R. | 1.8 | X-RAY DIFFRACTION | 0.213 | 0.170 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
6wo5 | A | B | 0 | E | protein | null | envelope glycoprotein e2 | IMMUNE SYSTEM/Viral Protein | 04/24/20 | Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 1a bound to neutralizing antibody 212.1.1 and non neutralizing antibody E1 | HOMO SAPIENS; HEPATITIS C VIRUS (ISOLATE H) | homo sapiens | homo sapiens | hepatitis c virus (isolate h) | Tzarum, N., Wilson, I.A., Law, M. | 2.619 | X-RAY DIFFRACTION | 0.250 | 0.203 | false | true | IGHV1 | IGKV2 | Kappa | null | null | null | null | null |
4nhh | I | F | 0 | D | protein | null | 2g12 igg dimer heavy chain | IMMUNE SYSTEM | 11/05/13 | Structure of 2G12 IgG Dimer | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Wu, Y., West Jr., A.P., Kim, H.J., Thornton, M.E., Ward, A.B., Bjorkman, P.J. | 6.5 | X-RAY DIFFRACTION | 0.366 | 0.381 | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
6axp | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 09/07/17 | Structure of cetuximab with aminoheptanoic acid-linked n-octylarginine meditope variant | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | null | Bzymek, K.P., Williams, J.C. | 2.484 | X-RAY DIFFRACTION | 0.228 | 0.179 | false | true | IGHV2 | IGKV5 | Kappa | 0.000009 | -6.91751 | Unknown | null | TBD |
1fsk | I | H | 0 | G | protein | null | major pollen allergen bet v 1-a | IMMUNE SYSTEM | 09/11/00 | COMPLEX FORMATION BETWEEN A FAB FRAGMENT OF A MONOCLONAL IGG ANTIBODY AND THE MAJOR ALLERGEN FROM BIRCH POLLEN BET V 1 | BETULA PENDULA; MUS MUSCULUS | mus musculus | mus musculus | betula pendula | Mirza, O., Henriksen, A., Ipsen, H., Larsen, J., Wissenbach, M., Spangfort, M., Gajhede, M. | 2.9 | X-RAY DIFFRACTION | 0.285 | 0.253 | false | true | IGHV1 | IGKV6 | Kappa | 0 | -13.12374 | Unknown | null | TBD |
7pgb | A | B | 0 | C | protein | null | ion transport protein,voltage-gated sodium channel | MEMBRANE PROTEIN | 08/13/21 | NaV_Ae1/Sp1CTD_pore-SAT09 complex | HOMO SAPIENS; ALKALILIMNICOLA EHRLICHII (STRAIN ATCC BAA-1101 / DSM 17681 / MLHE-1); RUEGERIA POMEROYI (STRAIN ATCC 700808 / DSM 15171 / DSS-3) | homo sapiens | homo sapiens | alkalilimnicola ehrlichii (strain atcc baa-1101/ dsm 17681 / mlhe-1), ruegeria pomeroyi (strain atcc 700808 / dsm 15171 / dss-3) | Lolicato, M., Arrigoni, C. | 3.6 | X-RAY DIFFRACTION | 0.232 | 0.207 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5tdp | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 09/19/16 | Crystal structure of the Fab fragment of anti-HER2 antibody 4D5 with redesigned heavy and light chain interfaces | HOMO SAPIENS | homo sapiens | homo sapiens | null | Yin, Y., Carter, P.J. | 1.716 | X-RAY DIFFRACTION | 0.252 | 0.220 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6bkb | H | L | 0 | E | protein | null | polyprotein | IMMUNE SYSTEM | 11/08/17 | Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 6a bound to broadly neutralizing antibody AR3A | HOMO SAPIENS; RECOMBINANT HEPATITIS C VIRUS HK6A/JFH-1 | homo sapiens | homo sapiens | recombinant hepatitis c virus hk6a/jfh-1 | Tzarum, N., Wilson, I.A., Law, M. | 2.799 | X-RAY DIFFRACTION | 0.267 | 0.230 | false | true | IGHV1 | IGKV3 | Kappa | 0 | -12.037965 | BLI | null | TBD |
6udk | A | B | 0 | G | protein | null | rc1 variant of hiv-1 env glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 09/19/19 | HIV-1 bNAb 1-55 in complex with modified BG505 SOSIP-based immunogen RC1 and 10-1074 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Abernathy, M.E., Barnes, C.O., Gristick, H.B., Bjorkman, P.J. | 3.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | unknown | unknown | null | null | null | null | null |
7obf | A | null | 0 | null | null | null | null | HYDROLASE | 04/22/21 | Crystal structure of the human VH antibody domain HEL4 | HOMO SAPIENS | homo sapiens | null | null | Belviso, B.D., Caliandro, R., Carrozzini, B. | 2.699 | X-RAY DIFFRACTION | 0.264 | 0.214 | false | false | IGHV3 | null | null | null | null | null | null | null |
7mxd | C | D | 0 | A | protein | null | envelope glycoprotein gp120 | IMMUNE SYSTEM/VIRAL PROTEIN | 05/19/21 | Cryo-EM structure of broadly neutralizing V2-apex-targeting antibody J038 in complex with HIV-1 Env | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS; MACACA MULATTA | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Zhou, T., Gao, F. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
5u3n | H | L | 0 | A | peptide | null | gp41 mper peptide | IMMUNE SYSTEM/VIRAL PROTEIN | 12/02/16 | Crystal Structure of DH511.12P Fab in Complex with HIV-1 gp41 MPER Peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Ofek, G., Wu, L., Lougheed, C.S., Williams, L.D., Nicely, N.I., Haynes, B.F. | 2.0 | X-RAY DIFFRACTION | 0.228 | 0.182 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4y7m | B | null | 0 | D | protein | null | type vi secretion protein icmf | MEMBRANE PROTEIN | 02/15/15 | T6SS protein TssM C-terminal domain (835-1129) from EAEC | LAMA GLAMA; ESCHERICHIA COLI 2-156-04_S3_C3 | lama glama | null | escherichia coli 2-156-04_s3_c3 | Nguyen, V.S., Spinelli, S., Durand, E., Roussel, A., Cambillau, C. | 1.92 | X-RAY DIFFRACTION | 0.211 | 0.183 | false | true | IGHV1 | null | null | null | null | null | null | null |
5ocl | A | null | 0 | null | null | null | null | IMMUNE SYSTEM | 07/03/17 | Nanobody-anti-VGLUT nanobody complex | VICUGNA PACOS; LAMA GLAMA | vicugna pacos | null | null | Dutzler, R., Schenck, S., Kunz, L. | 2.2 | X-RAY DIFFRACTION | 0.208 | 0.188 | false | true | IGHV1 | null | null | null | null | null | null | null |
4o5i | M | N | 0 | A | protein | null | hemagglutinin ha1 chain | VIRAL PROTEIN/IMMUNE SYSTEM | 12/19/13 | Crystal structure of broadly neutralizing antibody F045-092 in complex with A/Victoria/361/2011 (H3N2) influenza hemagglutinin | HOMO SAPIENS; INFLUENZA A VIRUS | homo sapiens | homo sapiens | influenza a virus | Lee, P.S., Wilson, I.A. | 6.501 | X-RAY DIFFRACTION | 0.248 | 0.201 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
5t5f | H | L | 0 | A | protein | null | factor h binding protein variant b24 | PROTEIN BINDING | 08/30/16 | Neisseria meningitidis factor H binding protein in complex with monoclonal antibody JAR5 | NEISSERIA MENINGITIDIS; MUS MUSCULUS | mus musculus | mus musculus | neisseria meningitidis | Malito, E. | 2.98 | X-RAY DIFFRACTION | 0.273 | 0.223 | false | false | IGHV1 | IGKV2 | Kappa | 0 | -13.262153 | SPR | null | TBD |
3vi4 | F | E | 0 | B | protein | null | integrin beta-1 | CELL ADHESION/IMMUNE SYSTEM | 09/21/11 | Crystal structure of alpha5beta1 integrin headpiece in complex with RGD peptide | HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Nagae, M., Nogi, T., Takagi, J. | 2.9 | X-RAY DIFFRACTION | 0.275 | 0.215 | false | true | IGHV1 | IGKV2 | Kappa | null | null | null | null | null |
2a0l | F | E | 0 | B | protein | null | voltage-gated potassium channel | Membrane Protein | 06/16/05 | Crystal structure of KvAP-33H1 Fv complex | AEROPYRUM PERNIX; MUS MUSCULUS | mus musculus | mus musculus | aeropyrum pernix | Lee, S.Y., Lee, A., Chen, J., Mackinnon, R. | 3.9 | X-RAY DIFFRACTION | 0.392 | 0.358 | false | false | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
6e9i | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 08/01/18 | The crystal structure of bovine ultralong antibody BOV-4 | BOS TAURUS | bos taurus | bos taurus | null | Dong, J., Crowe, J.E. | 2.5 | X-RAY DIFFRACTION | 0.243 | 0.202 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
1bey | H | L | 0 | null | null | null | null | ANTIBODY | 05/18/98 | ANTIBODY TO CAMPATH-1H HUMANIZED FAB | HOMO SAPIENS | homo sapiens | homo sapiens | null | Cheetham, G.M.T., Hale, G., Waldmann, H., Bloomer, A.C. | 3.25 | X-RAY DIFFRACTION | 0.306 | 0.214 | false | false | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
2nz9 | F | E | 0 | B | protein | null | botulinum neurotoxin type a | TOXIN/IMMUNE SYSTEM | 11/22/06 | Crystal structure of botulinum neurotoxin type A complexed with monoclonal antibody AR2 | HOMO SAPIENS; CLOSTRIDIUM BOTULINUM | null | null | clostridium botulinum | Stevens, R.C., Arndt, J.W. | 3.79 | X-RAY DIFFRACTION | 0.278 | 0.224 | false | false | IGHV5 | IGKV3 | Kappa | 0 | -15.12 | Other | 23 | 17173035 |
3c5s | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 02/01/08 | Crystal Structure of monoclonal Fab F22-4 specific for Shigella flexneri 2a O-Ag | MUS MUSCULUS | mus musculus | mus musculus | null | Saul, F.A., Vulliez-le-Normand, B., Bentley, G.A. | 2.0 | X-RAY DIFFRACTION | 0.260 | 0.199 | false | false | IGHV6 | IGKV2 | Kappa | null | null | null | null | null |
7bel | A | B | 0 | R | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 12/23/20 | Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in a ternary complex with COVOX-88 and COVOX-45 Fabs | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Zhao, Y., Ren, J., Stuart, D. | 2.53 | X-RAY DIFFRACTION | 0.286 | 0.249 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6ev2 | C | D | 0 | C | carbohydrate | BGC | polysaccharide | IMMUNE SYSTEM | 11/01/17 | Crystal structure of antibody against schizophyllan in complex with laminarihexaose | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Sung, K.H., Josewski, J., Duebel, S., Blankenfeldt, W., Rau, U. | 2.403 | X-RAY DIFFRACTION | 0.233 | 0.194 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
5x2p | H | L | 0 | A | B | protein | protein | NA | NA | taste receptor, type 1, member 2a | taste receptor, type 1, member 3 | SIGNALING PROTEIN/IMMUNE SYSTEM | 02/02/17 | Crystal structure of the medaka fish taste receptor T1r2a-T1r3 ligand binding domains in complex with L-glutamate | ORYZIAS LATIPES; MUS MUSCULUS | mus musculus | mus musculus | oryzias latipes | oryzias latipes | Nuemket, N., Yasui, N., Atsumi, N., Yamashita, A. | 2.608 | X-RAY DIFFRACTION | 0.228 | 0.153 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6qpg | P | null | 0 | J | K | protein | protein | NA | NA | polymerase acidic protein | rna-directed rna polymerase catalytic subunit | RNA BINDING PROTEIN | 02/13/19 | Influenza A virus Polymerase Heterotrimer A/nt/60/1968(H3N2) in complex with Nanobody NB8205 | INFLUENZA A VIRUS (STRAIN A/NORTHERN TERRITORY/60/1968 H3N2); CAMELIDAE | camelidae | null | influenza a virus (strain a/northernterritory/60/1968 h3n2) | influenza a virus (strain a/northernterritory/60/1968 h3n2) | Fan, H.T., Keown, J.R., Fodor, E., Grimes, J.M. | 3.34 | X-RAY DIFFRACTION | 0.305 | 0.251 | false | true | IGHV3 | null | null | null | null | null | null | null |
4yny | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 03/11/15 | Crystal structure of monoclonal anti-human podoplanin antibody NZ-1 | RATTUS NORVEGICUS | rattus norvegicus | rattus norvegicus | null | Fujii, Y., Kitago, Y., Arimori, T., Takagi, J. | 1.584 | X-RAY DIFFRACTION | 0.204 | 0.168 | false | true | IGHV5 | IGLV3 | Lambda | null | null | null | null | null |
5thr | P | Q | 0 | C | protein | null | bg505 sosip gp41 | VIRAL PROTEIN | 09/30/16 | Cryo-EM structure of a BG505 Env-sCD4-17b-8ANC195 complex | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Wang, H., Bjorkman, P.J. | 8.9, 8.9 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
6sc5 | B | null | 0 | A | protein | null | e3 ubiquitin-protein ligase rnf31 | LIGASE | 07/23/19 | dAb3/HOIP-RBR-Ligand2 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | synthetic construct | null | homo sapiens | Tsai, Y.-C.I., Johansson, H., House, D., Rittinger, K. | 2.1 | X-RAY DIFFRACTION | 0.252 | 0.219 | false | true | IGHV3 | null | null | null | null | null | null | null |
7fjs | C | A | 0 | B | protein | null | spike protein s1 | IMMUNE SYSTEM/VIRAL PROTEIN | 08/04/21 | Crystal structure of T6 Fab bound to theSARS-CoV-2 RBD of B.1.351 | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Wang, X., Zhang, L., Zhang, S., Liang, Q. | 2.9 | X-RAY DIFFRACTION | 0.285 | 0.217 | false | true | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
6xbj | S | s | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 06/06/20 | Structure of human SMO-D384R complex with Gi | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | homo sapiens | Qi, X., Long, T., Li, X. | 3.88 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
5alc | H | L | 0 | L | Hapten | TIQ | Ticagrelor | IMMUNE SYSTEM | 03/07/15 | Ticagrelor antidote candidate Fab 72 in complex with ticagrelor | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Buchanan, A., Newton, P., Pehrsson, S., Inghardt, T., Antonsson, T., Svensson, P., Sjogren, T., Oster, L., Janefeldt, A., Sandinge, A., Keyes, F., Austin, M., Spooner, J., Penney, M., Howells, G., Vaughan, T., Nylander, S. | 1.7 | X-RAY DIFFRACTION | 0.2367 | 0.1975 | false | true | IGHV1 | IGLV1 | Lambda | 0 | -11.092353 | Unknown | null | TBD |
7te6 | C | D | 0 | B | A | protein | protein | NA | NA | glutamate receptor ionotropic, nmda 2b | glutamate receptor ionotropic, nmda 1 | SIGNALING PROTEIN/IMMUNE SYSTEM | 01/04/22 | Crystal structure of GluN1b-2B ATD complexed to Fab5 anti-GluN2B antibody | XENOPUS LAEVIS; RATTUS NORVEGICUS; MUS MUSCULUS | mus musculus | mus musculus | rattus norvegicus | xenopus laevis | Regan, M., Tajima, N., Furukawa, H. | 4.55 | X-RAY DIFFRACTION | 0.324 | 0.282 | false | false | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
3cfc | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 03/03/08 | High-resolution structure of blue fluorescent antibody EP2-19G2 | MUS MUSCULUS | mus musculus | mus musculus | null | Debler, E.W., Wilson, I.A. | 1.7 | X-RAY DIFFRACTION | 0.231 | 0.191 | false | false | IGHV5 | IGKV2 | Kappa | null | null | null | null | null |
1dee | F | E | 0 | H | protein | null | immunoglobulin g binding protein a | IMMUNE SYSTEM | 11/15/99 | CRYSTAL STRUCTURE AT 2.7A RESOLUTION OF A COMPLEX BETWEEN A STAPHYLOCOCCUS AUREUS DOMAIN AND A FAB FRAGMENT OF A HUMAN IGM ANTIBODY | STAPHYLOCOCCUS AUREUS; HOMO SAPIENS | homo sapiens | homo sapiens | staphylococcus aureus | Graille, M., Stura, E.A., Corper, A.L., Sutton, B.J., Taussig, M.J., Charbonnier, J.B., Silverman, G.J. | 2.7 | X-RAY DIFFRACTION | 0.281 | 0.217 | false | false | IGHV3 | IGKV1 | Kappa | 0 | -8.728352 | Unknown | null | TBD |
7b18 | D | null | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 11/24/20 | SARS-CoV-spike bound to two neutralising nanobodies | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA GLAMA; VICUGNA PACOS | lama glama | null | severe acute respiratory syndrome coronavirus2 | Hallberg, B.M., Das, H. | 2.62 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
4nko | D | C | 0 | null | null | null | null | IMMUNE SYSTEM/CHAPERONE | 11/12/13 | Crystal structure of engineered anti-EE scFv antibody fragment | MUS MUSCULUS | mus musculus | mus musculus | null | Kalyoncu, S., Hyun, J., Pai, J.C., Johnson, J.L., Etzminger, K., Jain, A., Heaner Jr., D., Molares, I.A., Truskett, T.M., Maynard, J.A., Lieberman, R.L. | 3.496 | X-RAY DIFFRACTION | 0.344 | 0.308 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
1baf | H | L | 0 | L | Hapten | NPP | N-(2-AMINO-ETHYL)-4,6-DINITRO-N'-(2,2,6,6-TETRAMETHYL-1-OXY-PIPERIDIN-4-YL)-BENZENE-1,3-DIAMINE | IMMUNOGLOBULIN | 01/16/92 | 2.9 ANGSTROMS RESOLUTION STRUCTURE OF AN ANTI-DINITROPHENYL-SPIN-LABEL MONOCLONAL ANTIBODY FAB FRAGMENT WITH BOUND HAPTEN | MUS MUSCULUS | null | mus musculus | mus musculus | Leahy, D.J., Brunger, A.T., Fox, R.O., Hynes, T.R. | 2.9 | X-RAY DIFFRACTION | unknown | 0.195 | false | true | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
7x7d | F | null | 0 | E | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 03/09/22 | SARS-CoV-2 Delta RBD and Nb22 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; VICUGNA PACOS | vicugna pacos | null | severe acute respiratory syndrome coronavirus2 | Wang, Y., Ye, S. | 2.92 | X-RAY DIFFRACTION | 0.256 | 0.205 | false | true | IGHV1 | null | null | null | null | null | null | null |
7rai | H | L | 0 | A | protein | null | envelope glycoprotein gp160 | IMMUNE SYSTEM | 07/01/21 | Cryo-EM structure of M4008_N1 Fab in complex with BG505 DS-SOSIP.664 Env trimer | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Chan, K.-W., Kong, X.P. | 3.24 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
7syy | H | L | 0 | A | protein | null | attachment glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 11/25/21 | Hendra virus G protein head domain in complex with cross-neutralizing murine antibody hAH1.3 | HENDRA HENIPAVIRUS; MUS MUSCULUS | mus musculus | mus musculus | hendra henipavirus | Xu, K., Xu, Y. | 2.74 | X-RAY DIFFRACTION | 0.233 | 0.211 | false | true | IGHV9 | IGKV1 | Kappa | null | null | null | null | null |
6k2i | A | null | 11 | null | null | null | null | AFB1-BINDING PROTEIN | 05/14/19 | Solution structure of camelid nanobody Nb11 against aflatoxin B1 | VICUGNA PACOS | vicugna pacos | null | null | Nie, Y., Li, S.L., He, T., Zhu, J., Yang, Y.H. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
4wen | B | null | 0 | A | protein | null | k88 fimbrial protein ac | STRUCTURAL PROTEIN | 09/10/14 | Co-complex structure of the F4 fimbrial adhesin FaeG variant ac with llama single domain antibody V2 | ESCHERICHIA COLI; LAMA GLAMA | lama glama | null | escherichia coli | Moonens, K., Van den Broeck, I., Pardon, E., De Kerpel, M., Remaut, H., De Greve, H. | 1.89 | X-RAY DIFFRACTION | 0.226 | 0.188 | false | true | IGHV1 | null | null | 0 | -9.549709 | SPR | null | TBD |
1s78 | D | C | 0 | A | protein | null | receptor protein-tyrosine kinase erbb-2 | TRANSFERASE | 01/29/04 | Insights into ErbB signaling from the structure of the ErbB2-pertuzumab complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Franklin, M.C., Carey, K.D., Vajdos, F.F., Leahy, D.J., de Vos, A.M., Sliwkowski, M.X. | 3.25 | X-RAY DIFFRACTION | 0.268 | 0.224 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7bxa | B | C | 0 | A | protein | null | programmed cell death protein 1 | IMMUNE SYSTEM | 06/10/20 | Crystal structure of PD-1 in complex with tislelizumab Fab | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Heo, Y.S., Lee, S.H., Lim, H., Lee, H.T., Kim, Y.J., Park, E.B. | 3.32 | X-RAY DIFFRACTION | 0.299 | 0.243 | false | true | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
7dfp | C | B | 0 | A | protein | null | d(2) dopamine receptor,soluble cytochrome b562 | MEMBRANE PROTEIN | 11/09/20 | Human dopamine D2 receptor in complex with spiperone | HOMO SAPIENS; ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens, escherichia coli | Im, D., Shimamura, T., Iwata, S. | 3.1 | X-RAY DIFFRACTION | 0.217 | 0.185 | false | false | IGHV1 | IGKV10 | Kappa | null | null | null | null | null |
7zf4 | F | null | 0 | E | protein | null | spike protein s1 | VIRAL PROTEIN | 04/01/22 | SARS-CoV-2 Omicron RBD in complex with Omi-9 Fab and nanobody F2 | LAMA GLAMA; HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | lama glama | null | severe acute respiratory syndrome coronavirus2 | Zhou, D., Huo, J., Ren, J., Stuart, D.I. | 4.18 | X-RAY DIFFRACTION | 0.385 | 0.370 | false | true | IGHV1 | null | null | null | null | null | null | null |
7ldd | K | J | 0 | D | protein | null | glutamate receptor | MEMBRANE PROTEIN/IMMUNE SYSTEM | 01/13/21 | native AMPA receptor | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Yu, J., Rao, P., Gouaux, E. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV2 | IGKV10 | Kappa | null | null | null | null | null |
5kel | M | O | 0 | F | protein | null | ebola surface glycoprotein, gp1 | VIRAL PROTEIN/IMMUNE SYSTEM | 06/09/16 | EBOV GP in complex with variable Fab domains of IgGs c2G4 and c13C6 | ZAIRE EBOLAVIRUS; HOMO SAPIENS; ZAIRE EBOLAVIRUS (STRAIN MAYINGA-76) | homo sapiens | homo sapiens | zaire ebolavirus (strain mayinga-76) | Pallesen, J., Murin, C.D., de Val, N., Cottrell, C.A., Hastie, K.M., Turner, H.L., Fusco, M.L., Flyak, A.I., Zeitlin, L., Crowe Jr., J.E., Andersen, K.G., Saphire, E.O., Ward, A.B. | 4.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV8 | IGKV6 | Kappa | null | null | null | null | null |
3kym | N | M | 0 | null | null | null | null | IMMUNE SYSTEM | 12/06/09 | Crystal structure of Li33 IgG2 di-Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Silvian, L.F., Pepinsky, R.B., Walus, L. | 2.62 | X-RAY DIFFRACTION | 0.339 | 0.259 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
7n8h | H | G | 0 | F | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 06/14/21 | SARS-CoV-2 S (B.1.429 / epsilon variant) + S2M11 + S2L20 Global Refinement | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 2.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
4n1h | D | null | 0 | C | protein | null | beta-lactamase | HYDROLASE/IMMUNE SYSTEM | 10/04/13 | Structure of a single-domain camelid antibody fragment cAb-F11N in complex with the BlaP beta-lactamase from Bacillus licheniformis | LAMA GLAMA; BACILLUS LICHENIFORMIS | lama glama | null | bacillus licheniformis | Pain, C., Kerff, F., Herman, R., Sauvage, E., Preumont, S., Charlier, P., Dumoulin, M. | 3.0 | X-RAY DIFFRACTION | 0.284 | 0.208 | false | true | IGHV1 | null | null | null | null | null | null | null |
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