pdb
stringlengths
4
4
Hchain
stringclasses
59 values
Lchain
stringclasses
60 values
model
int64
0
76
antigen_chain
stringclasses
386 values
antigen_type
stringclasses
24 values
antigen_het_name
stringclasses
240 values
antigen_name
stringlengths
1
396
short_header
stringclasses
448 values
date
stringlengths
8
8
compound
stringlengths
4
243
organism
stringlengths
3
175
heavy_species
stringclasses
121 values
light_species
stringclasses
67 values
antigen_species
stringclasses
937 values
authors
stringlengths
6
762
resolution
stringlengths
1
8
method
stringclasses
10 values
r_free
stringclasses
354 values
r_factor
stringclasses
342 values
scfv
bool
2 classes
engineered
bool
2 classes
heavy_subclass
stringclasses
14 values
light_subclass
stringclasses
35 values
light_ctype
stringclasses
3 values
affinity
float64
0
0
delta_g
float64
-16.91
-5.04
affinity_method
stringclasses
11 values
temperature
float64
4
37
pmid
stringclasses
157 values
4kro
D
C
0
A
protein
null
epidermal growth factor receptor
TRANSFERASE/IMMUNE SYSTEM
05/16/13
Nanobody/VHH domain EgA1 in complex with the extracellular region of EGFR
MUS MUSCULUS, HOMO SAPIENS; HOMO SAPIENS; LAMA GLAMA
mus musculus, homo sapiens
mus musculus, homo sapiens
homo sapiens
Ferguson, K.M., Schmitz, K.R.
3.054
X-RAY DIFFRACTION
0.280
0.221
false
true
IGHV2
IGKV5
Kappa
0
-8.948201
SPR
null
TBD
4jre
B
C
0
A
protein
null
nitrite extrusion protein 1
TRANSPORT PROTEIN/Immune System
03/21/13
Crystal structure of nitrate/nitrite exchanger NarK with nitrite bound
ESCHERICHIA COLI; MUS MUSCULUS
mus musculus
mus musculus
escherichia coli
Zheng, H., Wisedchaisri, G., Gonen, T.
2.8
X-RAY DIFFRACTION
0.269
0.223
false
false
IGHV9
IGKV19
Kappa
null
null
null
null
null
5t3x
D
E
0
G
protein
null
envelope glycoprotein gp160
VIRAL PROTEIN/IMMUNE SYSTEM
08/26/16
3.9 Angstrom Crystal Structure of a Fully and Natively Glycosylated BG505 SOSIP.664 HIV-1 Env Trimer in Complex with the Broadly Neutralizing Antibodies IOMA and 10-1074.
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Gristick, H.B., Bjorkman, P.J.
3.9
X-RAY DIFFRACTION
0.331
0.296
false
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
5xjm
H
L
0
A
protein
null
type-2 angiotensin ii receptor,soluble cytochrome b562,type-2 angiotensin ii receptor
SIGNALING PROTEIN
05/02/17
Complex structure of angiotensin II type 2 receptor with Fab
HOMO SAPIENS; ESCHERICHIA COLI; MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
homo sapiens, escherichia coli
Asada, H., Horita, S., Shimamura, T., Iwata, S.
3.2
X-RAY DIFFRACTION
0.275
0.226
false
true
IGHV5
IGKV4
Kappa
0
-12.778235
Unknown
null
TBD
7mta
H
L
2
G
protein
null
rhodopsin kinase grk1
MEMBRANE, Signaling protein/Immune System
05/13/21
Rhodopsin kinase (GRK1)-S5E/S488E/T489E in complex with rhodopsin and Fab1
BOS TAURUS; HOMO SAPIENS
homo sapiens
homo sapiens
bos taurus
Chen, Q., Chen, C.-L., Tesmer, J.J.G.
4.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
5jmo
D
null
0
B
protein
null
furin
Hydrolase/Antibody
04/29/16
X-ray structure of a protease-antibody complex
CAMELUS DROMEDARIUS; HOMO SAPIENS; SYNTHETIC CONSTRUCT
camelus dromedarius
null
homo sapiens
Dahms, S.O., Than, M.E.
1.998
X-RAY DIFFRACTION
0.197
0.163
false
true
IGHV3
null
null
null
null
null
null
null
7a6c
C
B
0
A
protein
null
multidrug resistance protein 1
TRANSPORT PROTEIN
08/25/20
Nanodisc reconstituted human ABCB1 in complex with MRK16 Fab and elacridar
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Nosol, K., Locher, K.P.
3.6
ELECTRON MICROSCOPY
null
null
false
true
IGHV5
IGKV1
Kappa
null
null
null
null
null
5udd
J
P
0
A
protein
null
fusion glycoprotein f0
Viral Protein/Immune System
12/26/16
Crystal Structure of RSV F B9320 Bound to MEDI8897
HUMAN RESPIRATORY SYNCYTIAL VIRUS 9320; HOMO SAPIENS
homo sapiens
homo sapiens
human respiratory syncytial virus 9320
McLellan, J.S.
4.3
X-RAY DIFFRACTION
0.295
0.237
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
6x5e
B
A
0
null
null
null
null
IMMUNE SYSTEM
05/26/20
Crystal structure of a Lewis-binding Fab (ch88.2)
MUS MUSCULUS
mus musculus
mus musculus
null
Soliman, C., Ramsland, P.A.
2.29
X-RAY DIFFRACTION
0.284
0.230
false
true
IGHV6
IGKV12
Kappa
null
null
null
null
null
3iy0
H
L
0
null
null
null
null
IMMUNE SYSTEM
04/07/09
Variable domains of the x-ray structure of Fab 14 fitted into the cryoEM reconstruction of the virus-Fab 14 complex
MUS MUSCULUS
mus musculus
mus musculus
null
Hafenstein, S., Bowman, V.D., Sun, T., Nelson, C.D., Palermo, L.M., Chipman, P.R., Battisti, A.J., Parrish, C.R., Rossmann, M.G.
12.5
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
IGKV6
Kappa
null
null
null
null
null
4l1h
null
A
0
null
null
null
null
IMMUNE SYSTEM
06/03/13
Bence-Jones immunoglobulin REI variable portion with seven point mutations
HOMO SAPIENS
null
homo sapiens
null
Uson, I.
1.68
X-RAY DIFFRACTION
unknown
unknown
false
true
null
IGKV1
Kappa
null
null
null
null
null
4m6o
H
L
0
null
null
null
null
IMMUNE SYSTEM
08/09/13
Crystal structure of anti-NGF antibody CNTO7309
HOMO SAPIENS
homo sapiens
homo sapiens
null
Teplyakov, A., Obmolova, G., Malia, T., Gilliland, G.L.
2.8
X-RAY DIFFRACTION
0.250
0.186
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
2vyr
J
null
0
A
protein
null
mdm4 protein
IMMUNE SYSTEM
07/28/08
Structure of human MDM4 N-terminal domain bound to a single domain antibody
HOMO SAPIENS
homo sapiens
null
homo sapiens
Yu, G.W., Vaysburd, M., Allen, M.D., Settanni, G., Fersht, A.R.
2.0
X-RAY DIFFRACTION
0.248
0.207
false
true
IGHV3
null
null
0
-9.69
ITC
15
19084022
6bf9
C
D
0
A
protein
null
insulin-degrading enzyme
HYDROLASE/IMMUNE SYSTEM
10/26/17
Cryo-EM structure of human insulin degrading enzyme in complex with FAB H11-E heavy chain, FAB H11-E light chain
HOMO SAPIENS; MUS MUSCULUS
mus musculus, homo sapiens
mus musculus, homo sapiens
homo sapiens
Liang, W.G., Zhang, Z., Bailey, L.J., Kossiakoff, A.A., Tan, Y.Z., Wei, H., Carragher, B., Potter, S.C., Tang, W.J.
7.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
5ugy
J
N
0
E
protein
null
hemagglutinin ha1
VIRAL PROTEIN/IMMUNE SYSTEM
01/10/17
Influenza hemagglutinin in complex with a neutralizing antibody
INFLUENZA A VIRUS (A/SOLOMON ISLANDS/3/2006(H1N1)); HOMO SAPIENS
homo sapiens
homo sapiens
influenza a virus (a/solomonislands/3/2006(h1n1))
Whittle, J.R.R., Jenni, S., Harrison, S.C.
2.801
X-RAY DIFFRACTION
0.289
0.259
false
true
IGHV1
IGLV3
Lambda
null
null
null
null
null
7n65
G
H
0
E
protein
null
envelope glycoprotein gp41
VIRAL PROTEIN/IMMUNE SYSTEM
06/07/21
Complex structure of HIV superinfection Fab QA013.2 and BG505.SOSIP.664
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Mangala Prasad, V., Shipley, M.M., Overbaugh, J.M., Lee, K.K.
4.15
ELECTRON MICROSCOPY
null
null
false
true
unknown
unknown
unknown
null
null
null
null
null
4xgz
H
L
0
h
peptide
null
unknown
CELL ADHESION
01/04/15
Crystal structure of human paxillin LD2 motif in complex with Fab fragment
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
homo sapiens
Nocula-Lugowska, M., Lugowski, M., Salgia, R., Kossiakoff, A.A.
2.5
X-RAY DIFFRACTION
0.245
0.228
false
true
IGHV3
IGKV1
Kappa
0
-10.395252
Unknown
null
TBD
7d68
N
null
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
BIOSYNTHETIC PROTEIN
09/29/20
Cryo-EM structure of the human glucagon-like peptide-2 receptor-Gs protein complex
BOS TAURUS; HOMO SAPIENS; SYNTHETIC CONSTRUCT
synthetic construct
null
bos taurus | bos taurus
Sun, W., Chen, L., Zhou, Q., Zhao, L., Zhang, H., Cong, Z., Shen, D., Zhao, F., Zhou, F., Cai, X., Chen, Y., Zhou, Y., Gadgaard, S., van der Velden, W.J., Zhao, S., Jiang, Y., Rosenkilde, M.M., Yang, D., Xu, H.E., Zhang, Y., Wang, M.
3
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
5xp1
null
A
0
null
null
null
null
IMMUNE SYSTEM
05/31/17
Structure of monomeric mutant of REI immunoglobulin light chain variable domain crystallized at pH 6
HOMO SAPIENS
null
homo sapiens
null
Mine, S., Nakamura, T., Uegaki, K., Hamada, D.
2.88
X-RAY DIFFRACTION
0.297
0.257
false
true
null
IGKV1
Kappa
null
null
null
null
null
3zkn
C
D
0
B
protein
null
beta-secretase 2
IMMUNE SYSTEM/HYDROLASE
01/23/13
BACE2 FAB INHIBITOR COMPLEX
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Banner, D.W., Kuglstatter, A., Benz, J., Stihle, M., Ruf, A.
2.0
X-RAY DIFFRACTION
0.25141
0.20318
false
true
IGHV2
IGKV3
Kappa
null
null
null
null
null
5imo
B
null
0
A
protein
null
protein vsig4
IMMUNE SYSTEM
03/06/16
Nanobody targeting mouse Vsig4 in Spacegroup P3221
CAMELIDAE; MUS MUSCULUS
camelidae
null
mus musculus
Wen, Y., Zheng, F.
2.1
X-RAY DIFFRACTION
0.281
0.241
false
true
IGHV1
null
null
null
null
null
null
null
5dub
A
B
0
null
null
null
null
IMMUNE SYSTEM
09/18/15
Context-independent anti-hypusine antibody FabHpu98 in complex with deoxyhypusine
ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT
oryctolagus cuniculus
oryctolagus cuniculus
null
Zhai, Q., Carter, P.J.
2.0
X-RAY DIFFRACTION
0.220
0.181
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
6mtt
H
L
0
P
peptide
null
rv217 founder virus gp41 peptide
IMMUNE SYSTEM
10/21/18
Crystal structure of VRC46.01 Fab in complex with gp41 peptide
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
human immunodeficiency virus 1
Kwon, Y.D., Druz, A., Law, W.H., Peng, D., Veradi, R., Doria-Rose, N.A., Kwong, P.D.
1.7
X-RAY DIFFRACTION
0.265
0.235
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
7qn7
F
null
0
C
protein
null
gamma-aminobutyric acid receptor subunit beta-3
MEMBRANE PROTEIN
12/20/21
Cryo-EM structure of human full-length extrasynaptic alpha4beta3delta GABA(A)R in complex with GABA, histamine and nanobody Nb25
HOMO SAPIENS
homo sapiens
null
homo sapiens
Sente, A., Desai, R., Naydenova, K., Malinauskas, T., Jounaidi, Y., Miehling, J., Zhou, X., Masiulis, S., Hardwick, S.W., Chirgadze, D.Y., Miller, K.W., Aricescu, A.R.
3
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7eow
B
null
0
A
protein
null
von willebrand factor
STRUCTURAL PROTEIN
04/23/21
High-resolution structure of vWF A1 domain in complex with caplacizumab, the first nanobody-based medicine
HOMO SAPIENS
homo sapiens
null
homo sapiens
Lee, H.T., Heo, Y.-S.
1.6
X-RAY DIFFRACTION
0.198
0.175
false
true
IGHV3
null
null
null
null
null
null
null
1bbd
H
L
0
null
null
null
null
IMMUNOGLOBULIN
05/05/92
THREE DIMENSIONAL STRUCTURE OF THE FAB FRAGMENT OF A NEUTRALIZING ANTIBODY TO HUMAN RHINOVIRUS SEROTYPE 2
MUS MUSCULUS
null
mus musculus
null
Tormo, J., Blaas, D., Fita, I.
2.8
X-RAY DIFFRACTION
unknown
unknown
false
true
IGHV14
IGKV8
Kappa
null
null
null
null
null
6uyf
H
L
0
E
protein
null
envelope glycoprotein e2
VIRAL PROEIN/IMMUNE SYSTEM
11/13/19
Structure of Hepatitis C Virus Envelope Glycoprotein E2mc3-v1 redesigned core from genotype 6a bound to broadly neutralizing antibody AR3B
HOMO SAPIENS; RECOMBINANT HEPATITIS C VIRUS HK6A/JFH-1
homo sapiens
homo sapiens
recombinant hepatitis c virus hk6a/jfh-1
Tzarum, N., Wilson, I.A., Zhu, J.
2.06
X-RAY DIFFRACTION
0.232
0.189
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
5vta
H
L
0
D
protein
null
dipeptidyl peptidase 4
HYDROLASE
05/16/17
Co-Crystal Structure of DPPIV with a Chemibody Inhibitor
RATTUS NORVEGICUS; MUS MUSCULUS
mus musculus
mus musculus
rattus norvegicus
Wang, Z., Johnstone, S., Cheng, A.
2.8
X-RAY DIFFRACTION
0.300
0.250
false
true
IGHV1
IGKV4
Kappa
null
null
null
null
null
7ah1
A
a
0
null
null
null
null
IMMUNE SYSTEM
09/23/20
L19 diabody fragment from immunocytokine L19-IL2
HOMO SAPIENS
homo sapiens
null
null
Ongaro, T., Guarino, S.R., Scietti, L., Palamini, M., Wulhfard, S., Villa, A., Neri, D., Forneris, F.
2.0
X-RAY DIFFRACTION
0.220
0.198
true
true
unknown
unknown
unknown
null
null
null
null
null
7u0c
C
D
0
null
null
null
null
ANTIVIRAL PROTEIN,IMMUNE SYSTEM
02/17/22
Crystal structure of broadly neutralizing antibody HEPC3.4
HOMO SAPIENS
homo sapiens
homo sapiens
null
Flyak, A.I., Bjorkman, P.J.
3.3
X-RAY DIFFRACTION
0.260
0.215
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
7kzz
D
C
0
A
protein
null
cadmium and zinc efflux pump fief
MEMBRANE PROTEIN
12/10/20
Cryo-EM structure of YiiP-Fab complex in Holo state
SHEWANELLA ONEIDENSIS; HOMO SAPIENS
homo sapiens
homo sapiens
shewanella oneidensis
Lopez-Redondo, M.L., Fan, S., Koide, A., Koide, S., Beckstein, O., Stokes, D.L.
3.42
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
2qtj
C
O
9
null
null
null
null
IMMUNE SYSTEM
08/02/07
Solution structure of human dimeric immunoglobulin A
HOMO SAPIENS
homo sapiens
homo sapiens
null
Bonner, A., Furtado, P.B., Almogren, A., Kerr, M.A., Perkins, S.J.
NOT
SOLUTION SCATTERING
null
null
false
false
IGHV1
IGKV1
Kappa
null
null
null
null
null
7nfq
C
null
0
A
protein
null
polymerase basic protein 2
VIRAL PROTEIN
02/07/21
Fujian capmidlink domain in complex with Nb8193
INFLUENZA A VIRUS (A/DUCK/FUJIAN/13/2002(H5N1)); CAMELIDAE MIXED LIBRARY
camelidae mixed library
null
influenza a virus (a/duck/fujian/13/2002(h5n1))
Keown, J.R., Grimes, J.M., Fodor, E.
1.68
X-RAY DIFFRACTION
0.205
0.167
false
true
IGHV3
null
null
null
null
null
null
null
5esq
D
C
0
null
null
null
null
IMMUNE SYSTEM
11/16/15
Cetuximab Fab in complex with cyclic beta-alanine-linked meditope
MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
null
Bzymek, K.P., Williams, J.C.
2.55
X-RAY DIFFRACTION
0.242
0.190
false
true
IGHV2
IGKV5
Kappa
0.000002
-7.906995
Unknown
null
TBD
5gkr
C
D
0
null
null
null
null
IMMUNE SYSTEM/DNA
07/05/16
Crystal structure of SLE patient-derived anti-DNA antibody in complex with oligonucleotide
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
null
Arimori, T., Sakakibara, S., Kikutani, H., Takagi, J.
2.1
X-RAY DIFFRACTION
0.185
0.163
false
true
IGHV4
IGLV2
Lambda
0
-11.372747
Unknown
null
TBD
3if1
B
A
0
null
null
null
null
IMMUNE SYSTEM
07/23/09
Crystal structure of 237mAb in complex with a GalNAc
MUS MUSCULUS
mus musculus
mus musculus
null
Brooks, C.L., Evans, S.V., Borisova, S.N.
2.39
X-RAY DIFFRACTION
0.285
0.224
false
true
IGHV6
IGKV1
Kappa
null
null
null
null
null
4fp8
H
L
0
A
protein
null
hemagglutinin ha1 chain
VIRAL PROTEIN/IMMUNE SYSTEM
06/21/12
Crystal structure of broadly neutralizing antibody C05 bound to H3 influenza hemagglutinin, HA1 subunit
INFLUENZA A VIRUS; HOMO SAPIENS
homo sapiens
homo sapiens
influenza a virus
Ekiert, D.C., Wilson, I.A.
2.947
X-RAY DIFFRACTION
0.241
0.212
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
6q6z
B
null
0
A
protein
null
protein eds1l
IMMUNE SYSTEM
12/12/18
Structure of the plant immune signaling node EDS1 (enhanced disease susceptibility 1) in complex with nanobody ENB21
ARABIDOPSIS THALIANA; LAMA GLAMA
lama glama
null
arabidopsis thaliana
Niefind, K., Voss, M., Toelzer, C.
3.476
X-RAY DIFFRACTION
0.268
0.219
false
true
IGHV1
null
null
null
null
null
null
null
3nn8
C
F
0
null
null
null
null
IMMUNE SYSTEM
06/23/10
Crystal structure of engineered antibody fragment based on 3D5
MUS MUSCULUS
mus musculus
mus musculus
null
Lieberman, R.L., Maynard, J.A., Drury, J.E., Pai, J., Culver, J.A.
3.1
X-RAY DIFFRACTION
0.238
0.183
true
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
1nd0
H
G
0
G
Hapten
DP4
(1S,4S)-4-[DIMETHYL(PHENYL)SILYL]-1-METHYLPIPERIDINE 1-OXIDE
IMMUNE SYSTEM
12/05/02
CATIONIC CYCLIZATION ANTIBODY 4C6 COMPLEX WITH TRANSITION STATE ANALOG
MUS MUSCULUS
mus musculus
mus musculus
mus musculus
Zhu, X., Wilson, I.A.
2.45
X-RAY DIFFRACTION
0.286
0.242
false
false
IGHV3
IGKV1
Kappa
null
null
null
null
null
7lop
H
L
0
A
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
02/10/21
Crystal structure of SARS-CoV-2 receptor binding domain in complex with antibodies CV05-163 and CR3022
HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Yuan, M., Zhu, X., Wilson, I.A.
2.246
X-RAY DIFFRACTION
0.268
0.220
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
4xbp
A
B
0
null
null
null
null
IMMUNE SYSTEM
12/17/14
Crystal structure of human 4E10 Fab crystalized in the presence of Phosphatidylethanolamine (06:0 PE)
HOMO SAPIENS
homo sapiens
homo sapiens
null
Irimia, A., Stanfield, R.L., Wilson, I.A.
2.94
X-RAY DIFFRACTION
0.271
0.228
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
4xgz
W
X
0
w
peptide
null
unknown
CELL ADHESION
01/04/15
Crystal structure of human paxillin LD2 motif in complex with Fab fragment
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
homo sapiens
Nocula-Lugowska, M., Lugowski, M., Salgia, R., Kossiakoff, A.A.
2.5
X-RAY DIFFRACTION
0.245
0.228
false
true
IGHV3
IGKV1
Kappa
0
-10.395252
Unknown
null
TBD
5xaj
H
L
0
null
null
null
null
IMMUNE SYSTEM
03/13/17
Structural mimicry of the dengue virus envelope glycoprotein revealed by the crystallographic study of an idiotype-anti-idiotype Fab complex.
DENGUE VIRUS
dengue virus
dengue virus
null
Wong, Y.H., Goh, B.C., Lescar, J.
2.5
X-RAY DIFFRACTION
0.239
0.185
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
6sc9
B
null
0
A
protein
null
e3 ubiquitin-protein ligase rnf31
LIGASE
07/23/19
dAb3/HOIP-RBR-HOIPIN-8
HOMO SAPIENS; SYNTHETIC CONSTRUCT
synthetic construct
null
homo sapiens
Tsai, Y.-C.I., Johansson, H., House, D., Rittinger, K.
2.47
X-RAY DIFFRACTION
0.252
0.210
false
true
IGHV3
null
null
null
null
null
null
null
6w0f
A
B
0
C
protein
null
ph-gated potassium channel kcsa
MEMBRANE PROTEIN
02/29/20
Closed-gate KcsA soaked in 0mM KCl/5mM BaCl2
RATTUS NORVEGICUS; STREPTOMYCES LIVIDANS
rattus norvegicus
rattus norvegicus
streptomyces lividans
Rohaim, A., Gong, L., Li, J.
2.4
X-RAY DIFFRACTION
0.270
0.244
false
true
IGHV1
IGKV5
Kappa
null
null
null
null
null
6m3c
F
E
0
C
protein
null
vitamin k-dependent protein c heavy chain
BLOOD CLOTTING/IMMUNE SYSTEM
03/03/20
hAPC-h1573 Fab complex
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Wang, X., Wang, D., Zhao, X., Egner, U.
3.7
X-RAY DIFFRACTION
0.302
0.278
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
6axl
A
B
0
I
peptide
null
peptide ace-asn-pro-asn-ala-asn-pro-asn-ala-asn-pro-asn-ala-nh2
IMMUNE SYSTEM
09/07/17
Crystal structure of Fab317 complex
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
plasmodium falciparum
Oyen, D., Wilson, I.A.
2.4
X-RAY DIFFRACTION
0.217
0.175
false
true
IGHV3
IGKV1
Kappa
0
-9.696918
Unknown
null
TBD
1yc8
A
null
0
null
null
null
null
IMMUNE SYSTEM
12/22/04
cAbAn33- Y37V/E44G/R45L triple mutant
CAMELUS DROMEDARIUS
camelus dromedarius
null
null
Conrath, K., Vincke, C., Stijlemans, B., Schymkowitz, J., Wyns, L., Muyldermans, S., Loris, R.
2.7
X-RAY DIFFRACTION
0.324
0.246
false
true
IGHV1
null
null
null
null
null
null
null
4otx
H
L
0
null
null
null
null
immune system
02/14/14
Structure of the anti-Francisella tularensis O-antigen antibody N203 Fab fragment
MUS MUSCULUS
mus musculus
mus musculus
null
Lu, Z., Rynkiewicz, M.J., Yang, C.-Y., Madico, G., Perkins, H.M., Roche, M.I., Seaton, B.A., Sharon, J.
2.1
X-RAY DIFFRACTION
0.228
0.193
false
false
IGHV1
IGKV8
Kappa
null
null
null
null
null
7km6
h
l
0
null
null
null
null
IMMUNE SYSTEM
11/02/20
APOBEC3B antibody 5G7 Fv-clasp
HOMO SAPIENS
homo sapiens
homo sapiens
null
Tang, H., Shi, K., Aihara, H.
1.67
X-RAY DIFFRACTION
0.238
0.189
false
false
IGHV5
IGKV8
Kappa
null
null
null
null
null
4zyk
A
B
0
null
null
null
null
IMMUNE SYSTEM
05/21/15
Crystal Structure of Quaternary-Specific RSV-Neutralizing Human Antibody AM14
HOMO SAPIENS
homo sapiens
homo sapiens
null
Gilman, M.S.A., McLellan, J.S.
2.0
X-RAY DIFFRACTION
0.226
0.186
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
4lly
C
D
0
null
null
null
null
IMMUNE SYSTEM
07/09/13
Crystal structure of Pertuzumab Clambda Fab with variable and constant domain redesigns (VRD2 and CRD2) at 1.6A
HOMO SAPIENS
homo sapiens
homo sapiens
null
Pustilnik, A., Lewis, S.M., Wu, X., Sereno, A., Huang, F., Guntas, G., Leaver-Fay, A., Smith, E.M., Ho, C., Hansen-Estruch, C., Chamberlain, A.K., Truhlar, S.M., Kuhlman, B., Demarest, S.J., Atwell, S.
1.6
X-RAY DIFFRACTION
0.229
0.198
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
2kqm
null
B
17
null
null
null
null
IMMUNE SYSTEM
11/11/09
Solution structure of the KI O18/O8 Y87H immunoglobulin light chain variable domain
HOMO SAPIENS
null
homo sapiens
null
Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M.
NOT
SOLUTION NMR
null
null
false
true
null
IGKV1
Kappa
null
null
null
null
null
3cfi
C
null
0
B
protein
null
type ii secretory pathway, pseudopilin epsj
PROTEIN TRANSPORT/Immune system
03/03/08
Nanobody-aided structure determination of the EPSI:EPSJ pseudopilin heterdimer from Vibrio Vulnificus
VIBRIO VULNIFICUS; LAMA GLAMA
lama glama
null
vibrio vulnificus
Lam, A.Y., Pardon, E., Korotkov, K.V., Steyaert, J., Hol, W.G.J.
2.58
X-RAY DIFFRACTION
0.279
0.229
false
true
IGHV3
null
null
null
null
null
null
null
7fjn
H
L
0
B
protein
null
spike glycoprotein,envelope glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
08/04/21
Cryo-EM structure of South African (B.1.351) SARS-CoV-2 spike glycoprotein in complex with two T6 Fab
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2, human immunodeficiency virus 1
Wang, X., Zhang, L., Zhang, S., Liang, Q.
3.25
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV8
Kappa
null
null
null
null
null
7v2a
I
H
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN
08/07/21
SARS-CoV-2 Spike trimer in complex with XG014 Fab
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Wang, K., Wang, X., Pan, L.
3.4
ELECTRON MICROSCOPY
null
null
false
true
IGHV5
IGLV1
Lambda
null
null
null
null
null
7f5g
D
null
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN
06/22/21
The crystal structure of RBD-Nanobody complex, DL4 (SA4)
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; VICUGNA PACOS
vicugna pacos
null
severe acute respiratory syndrome coronavirus2
Li, T., Lai, Y., Zhou, Y., Tan, J., Li, D.
1.75
X-RAY DIFFRACTION
0.217
0.188
false
true
IGHV1
null
null
null
null
null
null
null
2kh2
B
b
17
A
protein
null
interleukin-1 beta
Cytokine/IMMUNE SYSTEM
03/23/09
Solution structure of a scFv-IL-1B complex
HOMO SAPIENS; MUS MUSCULUS
mus musculus
null
homo sapiens
Wilkinson, I.C., Hall, C.J., Veverka, V., Muskett, F.W., Stephens, P.E., Taylor, R.J., Henry, A.J., Carr, M.D.
NOT
SOLUTION NMR
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
5o2u
B
null
0
A
protein
null
capsid protein p24
VIRUS
05/22/17
Llama VHH in complex with p24
LAMA GLAMA; HUMAN IMMUNODEFICIENCY VIRUS 1
lama glama
null
human immunodeficiency virus 1
Caillat, C., Verrips, T., Weissenhorn, W.
2.76
X-RAY DIFFRACTION
0.256
0.222
false
true
IGHV1
null
null
0
-12.498046
SPR
null
TBD
6wio
A
B
0
C
protein
null
interleukin-17a
CYTOKINE/IMMUNE SYSTEM
04/10/20
Fab antigen complex
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Antonysamy, S.
2.17
X-RAY DIFFRACTION
0.227
0.208
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
7lo6
H
G
0
E
protein
null
envelope glycoprotein bg505 sosip.664 gp120
VIRAL PROTEIN/IMMUNE SYSTEM
02/09/21
Structure of CD4 mimetic BNM-III-170 in complex with BG505 SOSIP.664 HIV-1 Env trimer and 17b Fab
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Jette, C.A., Bjorkman, P.J.
3.9
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
6mtp
A
B
0
Q
peptide
null
rv217 founder virus gp41 peptide
IMMUNE SYSTEM
10/21/18
Crystal structure of VRC42.04 Fab in complex with gp41 peptide
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
human immunodeficiency virus 1
Kwon, Y.D., Druz, A., Law, W.H., Peng, D., Zhang, B., Doria-Rose, N.A., Kwong, P.D.
2.036
X-RAY DIFFRACTION
0.223
0.199
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
6x3w
K
L
0
D
protein
null
gamma-aminobutyric acid receptor subunit alpha-1
MEMBRANE PROTEIN
05/21/20
Human GABAA receptor alpha1-beta2-gamma2 subtype in complex with GABA plus phenobarbital
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Kim, J.J., Gharpure, A., Teng, J., Zhuang, Y., Howard, R.J., Zhu, S., Noviello, C.M., Walsh, R.M., Lindahl, E., Hibbs, R.E.
3.3
ELECTRON MICROSCOPY
null
null
false
false
IGHV14
IGKV6
Kappa
null
null
null
null
null
6xcn
B
D
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
06/08/20
Structure of the SARS-CoV-2 spike glycoprotein in complex with the C105 neutralizing antibody Fab fragment (state 2)
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Barnes, C.O., Bjorkman, P.J.
3.66
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
6x98
K
J
0
G
protein
null
bg505 hiv-1 env gp120
VIRAL PROTEIN/IMMUNE SYSTEM
06/02/20
Cryo-EM model of HIV-1 Env BG505 SOSIP.664 in complex with rabbit monoclonal antibody 11B fragment antigen binding variable domain
HUMAN IMMUNODEFICIENCY VIRUS 1; ORYCTOLAGUS CUNICULUS
oryctolagus cuniculus
oryctolagus cuniculus
human immunodeficiency virus 1
Ozorowski, G., Cottrell, C.A., Ward, A.B.
3.38
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
7r63
D
null
0
null
null
null
null
IMMUNE SYSTEM
06/22/21
Nb82, a nanobody against voltage gated sodium channels Nav1.4 and Nav1.5
LAMA GLAMA
lama glama
null
null
Srinivasan, L., Gabelli, S.B.
2.0
X-RAY DIFFRACTION
0.244
0.184
false
true
IGHV1
null
null
null
null
null
null
null
6hjx
F
null
0
A
protein
null
cys-loop ligand-gated ion channel
MEMBRANE PROTEIN
09/04/18
X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) 7'C pore mutant (L238C) in complex with nanobody 72
DICKEYA CHRYSANTHEMI; LAMA GLAMA
lama glama
null
dickeya chrysanthemi
Spurny, R., Govaerts, C., Evans, G.L., Pardon, E., Steyaert, J., Ulens, C.
2.5
X-RAY DIFFRACTION
0.245
0.204
false
true
IGHV1
null
null
null
null
null
null
null
5hys
H
L
0
I
protein
null
ig epsilon chain c region
IMMUNE SYSTEM
02/01/16
Structure of IgE complexed with omalizumab
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Pennington, L.F., Tarchevskaya, S.S., Sathiyamoorthy, K., Jardetzky, T.S.
2.5
X-RAY DIFFRACTION
0.239
0.221
false
true
IGHV3
IGKV1
Kappa
0
-14.20185
SPR
null
TBD
6xsw
G
I
0
J
protein
null
neurogenic locus notch homolog protein 3
SIGNALING PROTEIN/Immune System
07/16/20
Structure of the Notch3 NRR in complex with an antibody Fab Fragment
RATTUS NORVEGICUS; HOMO SAPIENS
rattus norvegicus
rattus norvegicus
homo sapiens
Bard, J.
2.98
X-RAY DIFFRACTION
0.256
0.233
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
6oc8
B
null
0
null
null
null
null
IMMUNE SYSTEM
03/22/19
Crystal structure of a VHH against the capsid protein from BLV
LAMA GLAMA
lama glama
null
null
Carrion, F., Larrieux, N., Trajtenberg, F., Buschiazzo, A.
2.109
X-RAY DIFFRACTION
0.241
0.205
false
true
IGHV1
null
null
null
null
null
null
null
1cl7
H
L
0
null
null
null
null
IMMUNE SYSTEM
05/06/99
ANTI HIV1 PROTEASE FAB
MUS MUSCULUS
mus musculus
mus musculus
null
Lescar, J., Bentley, G.A.
3.0
X-RAY DIFFRACTION
0.280
0.183
false
false
IGHV9
IGKV1
Kappa
null
null
null
null
null
6x1t
J
K
0
P
peptide
null
nm23-1-ptza peptide
IMMUNE SYSTEM
05/19/20
Structure of pHis Fab (SC50-3) in complex with pHis mimetic peptide
ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT
oryctolagus cuniculus
oryctolagus cuniculus
synthetic construct
Kalagiri, R., Stanfield, R.L., Wilson, I.A., Hunter, T.
2.34
X-RAY DIFFRACTION
0.269
0.244
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
6pzz
H
L
0
A
protein
null
neuraminidase
VIRAL PROTEIN/IMMUNE SYSTEM
08/01/19
CryoEM derived model of NA-80 Fab in complex with N9 Shanghai2
INFLUENZA A VIRUS (A/ENVIRONMENT/SHANGHAI/S1439/2013(H7N9)); HOMO SAPIENS
homo sapiens
homo sapiens
influenza a virus(a/environment/shanghai/s1439/2013(h7n9))
Ward, A.B., Turner, H.L., Zhu, X.
3.6
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
6y9b
H
L
0
C
protein
null
metalloreductase steap1
MEMBRANE PROTEIN
05/20/20
Cryo-EM structure of trimeric human STEAP1 bound to three Fab120.545 fragments
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Oosterheert, W., Gros, P.
2.97
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV8
Kappa
null
null
null
null
null
6vyv
L
P
0
H
protein
null
e2 glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
02/27/20
Human mAbs broadly protect against infection of arthritiogenic alphaviruses by recognizing conserved elements of the MXR8 receptor binding domain
ROSS RIVER VIRUS (STRAIN T48); HOMO SAPIENS
homo sapiens
homo sapiens
ross river virus (strain t48)
Miller, A.S., Kuhn, R.J.
6.33
ELECTRON MICROSCOPY
null
null
false
true
IGHV9
IGLV1
Lambda
null
null
null
null
null
2rcj
E
H
0
null
null
null
null
IMMUNE SYSTEM
09/20/07
Solution structure of human Immunoglobulin M
HOMO SAPIENS
homo sapiens
homo sapiens
null
Perkins, S.J., Nealis, A.S., Sutton, B.J., Feinstein, A.
NOT
SOLUTION SCATTERING
null
null
false
false
IGHV3
IGLV1
Lambda
null
null
null
null
null
7s7r
B
null
0
A
protein
null
merozoite surface protein p12
UNKNOWN FUNCTION
09/17/21
Plasmodium falciparum protein Pf12 bound to nanobody G7
PLASMODIUM FALCIPARUM 3D7; VICUGNA PACOS
vicugna pacos
null
plasmodium falciparum 3d7
Dietrich, M.H., Tham, W.H.
1.77
X-RAY DIFFRACTION
0.255
0.221
false
true
IGHV1
null
null
null
null
null
null
null
6k2i
A
null
5
null
null
null
null
AFB1-BINDING PROTEIN
05/14/19
Solution structure of camelid nanobody Nb11 against aflatoxin B1
VICUGNA PACOS
vicugna pacos
null
null
Nie, Y., Li, S.L., He, T., Zhu, J., Yang, Y.H.
NOT
SOLUTION NMR
null
null
false
true
IGHV1
null
null
null
null
null
null
null
5vzr
H
L
0
null
null
null
null
IMMUNE SYSTEM
05/29/17
Crystal Structure of MERS-CoV neutralizing antibody G4 Fab
MUS MUSCULUS
mus musculus
mus musculus
null
Wang, N., Wrapp, D., McLellan, J.S.
1.57
X-RAY DIFFRACTION
0.215
0.182
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
3qxw
E
null
0
null
null
null
null
IMMUNE SYSTEM
03/02/11
Free structure of an anti-methotrexate CDR1-4 Graft VHH Antibody
LAMA GLAMA
lama glama
null
null
Fanning, S.W., Horn, J.R.
1.85
X-RAY DIFFRACTION
0.238
0.189
false
true
IGHV1
null
null
null
null
null
null
null
7shz
K
L
0
H
protein
null
ige fc
IMMUNE SYSTEM
10/11/21
IgE-Fc in complex with HAE
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Pennington, L.F., Jardetzky, T.J., Kleinboelting, S.
3.0
X-RAY DIFFRACTION
0.236
0.186
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
6s5a
H
L
0
D | A
protein | protein
NA | NA
fc p329g lala | fc p329g lala
IMMUNE SYSTEM
07/01/19
CRYSTAL STRUCTURE OF FC P329G LALA WITH ANTI FC P329G FAB
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens | homo sapiens
Ehler, A., Darowski, D., Jost, C., Stubenrauch, K., Wessels, U., Benz, J., Birk, M., Freimoser-Grundschober, A., Bruenker, P., Moessner, E., Umana, P., Kobold, S., Klein, C.
1.72
X-RAY DIFFRACTION
0.226
0.196
false
true
IGHV4
IGLV1
Lambda
null
null
null
null
null
7p60
I
null
0
F
protein
null
volume-regulated anion channel subunit lrrc8a
MEMBRANE PROTEIN
07/15/21
Structure of homomeric LRRC8A Volume-Regulated Anion Channel in complex with synthetic nanobody Sb4 at 1:0.5 ratio
MUS MUSCULUS; SYNTHETIC CONSTRUCT
synthetic construct
null
mus musculus
Deneka, D., Rutz, S., Sawicka, M.
3.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
7l09
M
K
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
12/11/20
Cryo-EM structure of SARS-CoV-2 2P S ectodomain bound domain-swapped antibody 2G12 from masked 3D refinement
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Manne, K., Henderson, R., Acharya, P.
3.1
ELECTRON MICROSCOPY
null
null
false
true
unknown
IGKV1
Kappa
null
null
null
null
null
7t0j
B
A
0
null
null
null
null
IMMUNE SYSTEM
11/29/21
Crystal structure of S25-2 Fab Unliganded 3
MUS MUSCULUS
mus musculus
mus musculus
null
Legg, M.S.G., Blackler, R.J., Evans, S.V.
2.15
X-RAY DIFFRACTION
0.281
0.230
false
true
IGHV7
IGKV8
Kappa
null
null
null
null
null
6ikm
N
n
0
null
null
null
null
ANTIMICROBIAL PROTEIN
10/16/18
Crystal structure of SpuE-Spermidine in complex with ScFv5
PSEUDOMONAS AERUGINOSA; HOMO SAPIENS
pseudomonas aeruginosa
homo sapiens
null
Wu, D., Sun, X.
3.398
X-RAY DIFFRACTION
0.268
0.228
true
true
unknown
unknown
unknown
null
null
null
null
null
7f35
B
A
0
A
Hapten
GFN
1-cyclopropyl-6-fluoro-8-methoxy-7-[(3S)-3-methylpiperazin-1-yl]-4-oxo-1,4-dihydroquinoline-3-carboxylic acid
IMMUNE SYSTEM
06/15/21
Crystal structure of anti S-gatifloxacin antibody Fab fragment in complex with S-gatifloxacin
MUS MUSCULUS
mus musculus
mus musculus
mus musculus
Wang, L.T., Jiao, W.Y., Shen, X., Lei, H.T.
2.6
X-RAY DIFFRACTION
0.235
0.200
false
false
IGHV1
IGKV3
Kappa
null
null
null
null
null
1otu
C
D
0
A
protein
null
voltage-gated clc-type chloride channel eric
MEMBRANE PROTEIN
03/23/03
Structure of the Escherichia coli ClC Chloride channel E148Q mutant and Fab Complex
ESCHERICHIA COLI; MUS MUSCULUS
mus musculus
mus musculus
escherichia coli
Dutzler, R., Campbell, E.B., MacKinnon, R.
3.3
X-RAY DIFFRACTION
0.325
0.294
false
false
IGHV4
IGKV4
Kappa
null
null
null
null
null
2zuq
F
E
0
D
protein
null
disulfide bond formation protein b
Oxidoreductase/IMMUNE SYSTEM
10/28/08
Crystal structure of DsbB-Fab complex
ESCHERICHIA COLI; MUS MUSCULUS
mus musculus
mus musculus
escherichia coli
Inaba, K., Suzuki, M., Murakami, S.
3.3
X-RAY DIFFRACTION
0.351
0.275
false
false
IGHV5
IGKV8
Kappa
null
null
null
null
null
6rnn
D
C
0
null
null
null
null
IMMUNE SYSTEM
05/09/19
P46, an immunodominant surface protein from Mycoplasma hyopneumoniae
MUS MUSCULUS
mus musculus
mus musculus
null
Guasch, A., Fita, I.
1.735
X-RAY DIFFRACTION
0.256
0.222
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
7lq7
C
D
0
B
protein
null
spike protein s1
IMMUNE SYSTEM
02/13/21
Crystal structure of SARS-CoV-2 receptor binding domain in complex with antibodies CV503 and COVA1-16
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Yuan, M., Zhu, X., Wilson, I.A.
3.4
X-RAY DIFFRACTION
0.233
0.197
false
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
7c2l
I
M
0
B
protein
null
spike glycoprotein
MEMBRANE PROTEIN/IMMUNE SYSTEM
05/08/20
S protein of SARS-CoV-2 in complex bound with 4A8
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Yan, R.H., Zhang, Y.Y., Guo, Y.Y., Li, Y.N., Xia, L., Zhou, Q.
3.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV2
Kappa
null
null
null
null
null
7aqy
C
null
0
B
protein
null
variant surface glycoprotein mitat 1.2
MEMBRANE PROTEIN
10/23/20
Co-Crystal Structure of Variant Surface Glycoprotein VSG2 in complex with Nanobody VSG2(NB11)
LAMA GLAMA; TRYPANOSOMA BRUCEI BRUCEI
lama glama
null
trypanosoma brucei brucei
Stebbins, C.E., Hempelmann, A., VanStraaten, M.
1.9
X-RAY DIFFRACTION
0.242
0.209
false
true
IGHV1
null
null
null
null
null
null
null
5uk4
k
null
0
K
protein
null
anti-vesicular stomatitis virus n vhh
Viral Protein/RNA/Immune System
01/19/17
VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307
VESICULAR STOMATITIS INDIANA VIRUS (STRAIN SAN JUAN); VICUGNA PACOS
vicugna pacos
null
vesicular stomatitis indiana virus (strain sanjuan)
Hanke, L., Knockenhauer, K.E., Ploegh, H.L., Schwartz, T.U.
3.204
X-RAY DIFFRACTION
0.288
0.237
false
false
IGHV1
null
null
null
null
null
null
null
4oga
C
D
0
E
protein
null
insulin receptor domains l1-cr
HORMONE RECEPTOR/HORMONE/IMMUNE SYSTEM
01/15/14
Insulin in complex with Site 1 of the human insulin receptor
HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
homo sapiens
Lawrence, M.C., Menting, J.G.
3.5
X-RAY DIFFRACTION
0.284
0.264
false
true
IGHV2
IGKV8
Kappa
null
null
null
null
null
6uht
D
null
0
B
protein
null
botulinum neurotoxin type b
TOXIN/ANTITOXIN
09/28/19
Crystal structure of BoNT/B receptor-binding domain in complex with VHH JLI-G10
CLOSTRIDIUM BOTULINUM; VICUGNA PACOS
vicugna pacos
null
clostridium botulinum
Lam, K., Jin, R.
2.20001
X-RAY DIFFRACTION
0.211
0.194
false
true
IGHV1
null
null
null
null
null
null
null
1xf5
D
C
0
Q
peptide
null
capsid protein c
IMMUNE SYSTEM
09/14/04
Complex HCV core-Fab 19D9D6-Protein L mutant (H74C, Y64W)in space group P21212
FINEGOLDIA MAGNA; MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
null
Menez, R., Housden, N.G., Harrison, S., Jolivet-Reynaud, C., Gore, M.G., Stura, E.A.
2.6
X-RAY DIFFRACTION
0.240
0.199
false
false
IGHV9
IGKV8
Kappa
null
null
null
null
null
6o2b
H
I
0
K
peptide
null
circumsporozoite protein
IMMUNE SYSTEM
02/22/19
Crystal structure of 4493 Fab in complex with circumsporozoite protein DND and anti-kappa VHH domain
HOMO SAPIENS; LAMA GLAMA; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
plasmodium falciparum
Scally, S.W., Bosch, A., Prieto, K., Murugan, R., Wardemann, H., Julien, J.P.
2.1
X-RAY DIFFRACTION
0.210
0.177
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
5cjo
H
L
0
A
protein
null
insulin
HYDROLASE/HYDROLASE INHIBITOR
07/14/15
Crystal Structure Analysis of Elbow-Engineered-Fab-Bound Human Insulin Degrading Enzyme (IDE) in Complex with Insulin
MUS MUSCULUS; HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
homo sapiens
liang, w.g., bailey, L., tang, w.j.
3.287
X-RAY DIFFRACTION
0.245
0.196
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null