pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
6mb3 | F | P | 0 | E | protein | null | plasmodium falciparum recombinant shortened csp | IMMUNE SYSTEM | 08/29/18 | Cryo-EM structure of the circumsporozoite protein of Plasmodium falciparum with a vaccine-elicited antibody reveals maturation of inter-antibody contacts | PLASMODIUM FALCIPARUM; HOMO SAPIENS | homo sapiens | homo sapiens | plasmodium falciparum | Cottrell, C.A., Torres, J.L., Ward, A.B. | 3.37 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
3mcg | null | 2 | 0 | null | null | null | null | IMMUNOGLOBULIN | 05/09/89 | THREE-DIMENSIONAL STRUCTURE OF A LIGHT CHAIN DIMER CRYSTALLIZED IN WATER. CONFORMATIONAL FLEXIBILITY OF A MOLECULE IN TWO CRYSTAL FORMS | HOMO SAPIENS | null | homo sapiens | null | Ely, K.R., Herron, J.N., Edmundson, A.B. | 2.0 | X-RAY DIFFRACTION | unknown | unknown | false | true | null | IGLV2 | Lambda | null | null | null | null | null |
1g9e | A | null | 1 | null | null | null | null | IMMUNE SYSTEM | 11/23/00 | SOLUTION STRUCTURE AND RELAXATION MEASUREMENTS OF AN ANTIGEN-FREE HEAVY CHAIN VARIABLE DOMAIN (VHH) FROM LLAMA | LAMA GLAMA | lama glama | null | null | Renisio, J.-G., Perez, J., Czisch, M., Guenneugues, M., Bornet, O., Frenken, L., Cambillau, C., Darbon, H. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7lok | K | J | 0 | A | protein | null | envelope glycoprotein bg505 sosip.664 gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 02/10/21 | Structure of CD4 mimetic M48U1 in complex with BG505 SOSIP.664 HIV-1 Env trimer and 17b Fab | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Jette, C.A., Bjorkman, P.J. | 3.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6pzz | F | E | 0 | B | protein | null | neuraminidase | VIRAL PROTEIN/IMMUNE SYSTEM | 08/01/19 | CryoEM derived model of NA-80 Fab in complex with N9 Shanghai2 | INFLUENZA A VIRUS (A/ENVIRONMENT/SHANGHAI/S1439/2013(H7N9)); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus(a/environment/shanghai/s1439/2013(h7n9)) | Ward, A.B., Turner, H.L., Zhu, X. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
2xkn | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 07/09/10 | Crystal structure of the Fab fragment of the anti-EGFR antibody 7A7 | MUS MUSCULUS | mus musculus | mus musculus | null | Talavera, A., Mackenzie, J., Friemann, R., Garrido, G., Lopez-Requena, A., Moreno, E., Krengel, U. | 1.4 | X-RAY DIFFRACTION | 0.1765 | 0.1438 | false | false | IGHV5 | IGKV10 | Kappa | null | null | null | null | null |
6dla | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 05/31/18 | Crystal structures of an influenza A hemagglutinin antibody Fab CH65:7969d2 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Dong, J., Crowe, J.E., Finn, J.A. | 2.004 | X-RAY DIFFRACTION | 0.207 | 0.178 | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null |
1igt | B | A | 0 | null | null | null | null | IMMUNOGLOBULIN | 10/25/96 | STRUCTURE OF IMMUNOGLOBULIN | MUS MUSCULUS | mus musculus | mus musculus | null | Harris, L.J., Larson, S.B., Hasel, K.W., McPherson, A. | 2.8 | X-RAY DIFFRACTION | 0.297 | 0.209 | false | false | IGHV5 | IGKV10 | Kappa | null | null | null | null | null |
2p4a | D | null | 0 | C | protein | null | ribonuclease pancreatic | HYDROLASE/IMMUNE SYSTEM | 03/11/07 | X-ray structure of a camelid affinity matured single-domain vhh antibody fragment in complex with RNASE A | CAMELUS DROMEDARIUS; BOS TAURUS | camelus dromedarius | null | bos taurus | Tereshko, V., Koide, A., Uysal, S., Koide, S. | 1.9 | X-RAY DIFFRACTION | 0.218 | 0.184 | false | true | IGHV1 | null | null | 0 | -13.51 | Other | 30 | 17888451 |
7r6x | C | D | 0 | R | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 06/23/21 | SARS-CoV-2 spike receptor-binding domain (RBD) in complex with S2E12 Fab, S309 Fab, and S304 Fab | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Snell, G., Czudnochowski, N., Croll, T.I., Nix, J.C., Corti, D., Cameroni, E., Pinto, D., Beltramello, M. | 2.95 | X-RAY DIFFRACTION | 0.262 | 0.232 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6qb9 | A | a | 0 | null | null | null | null | APOPTOSIS | 12/20/18 | Structure of an anti-Mcl1 scFv | HOMO SAPIENS | homo sapiens | null | null | Hargreaves, D. | 1.85 | X-RAY DIFFRACTION | 0.239 | 0.200 | true | true | unknown | unknown | unknown | null | null | null | null | null |
4aiz | null | C | 0 | null | null | null | null | IMMUNE SYSTEM | 02/15/12 | Crystallographic structure of 3mJL2 from the germinal line lambda 3 | HOMO SAPIENS | null | homo sapiens | null | Villalba, M.I., Luna, O.D., Rudino-Pinera, E., Sanchez, R., Sanchez-Lopez, R., Rojas-Trejo, S., Olamendi-Portugal, T., Fernandez-Velasco, D.A., Becerril, B. | 1.75 | X-RAY DIFFRACTION | 0.2185 | 0.1662 | false | true | null | IGLV3 | Lambda | null | null | null | null | null |
3auv | A | a | 0 | null | null | null | null | IMMUNE SYSTEM | 02/16/11 | Predicting Amino Acid Preferences in the Complementarity Determining Regions of an Antibody-Antigen Recognition Interface | HOMO SAPIENS | homo sapiens | null | null | Yu, C.M., Peng, H.P., Chen, I.C., Lee, Y.C., Chen, J.B., Tsai, K.C., Chen, C.T., Chang, J.Y., Yang, E.W., Hsu, P.C., Jian, J.W., Hsu, H.J., Chang, H.J., Hsu, W.L., Huang, K.F., Ma, A.C., Yang, A.S. | 2.4 | X-RAY DIFFRACTION | 0.251 | 0.216 | true | true | unknown | unknown | unknown | null | null | null | null | null |
5d1q | C | D | 0 | E | protein | null | iron-regulated surface determinant protein b | IMMUNE SYSTEM | 08/04/15 | IsdB NEAT2 bound by clone D2-06 | HOMO SAPIENS; STAPHYLOCOCCUS AUREUS (STRAIN BOVINE RF122 / ET3-1) | homo sapiens | homo sapiens | staphylococcus aureus (strain bovine rf122 /et3-1) | Deng, X. | 3.22 | X-RAY DIFFRACTION | 0.288 | 0.239 | false | true | IGHV3 | IGKV3 | Kappa | 0 | -14.851238 | SPR | null | TBD |
4rwy | H | L | 0 | A | protein | null | hiv-1 yu2 gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 12/08/14 | Crystal structure of VH1-46 germline-derived CD4-binding site-directed antibody 8ANC131 in complex with HIV-1 clade B YU2 gp120 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Luongo, T.S., Kwong, P.D. | 2.128 | X-RAY DIFFRACTION | 0.254 | 0.219 | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null |
7x8r | N | null | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 03/14/22 | Cryo-EM structure of the Boc5-bound hGLP-1R-Gs complex | Bos taurus; Homo sapiens; Rattus norvegicus; synthetic construct | synthetic construct | null | bos taurus | rattus norvegicus | Cong, Z.T., Zhou, Q.T., Li, Y., Chen, L.N., Zhang, Z.C., Liang, A.Y., Liu, Q., Wu, X.Y., Dai, A.T., Xia, T., Wu, W., Zhang, Y., Yang, D.H., Wang, M.W. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
6k2i | A | null | 0 | null | null | null | null | AFB1-BINDING PROTEIN | 05/14/19 | Solution structure of camelid nanobody Nb11 against aflatoxin B1 | VICUGNA PACOS | vicugna pacos | null | null | Nie, Y., Li, S.L., He, T., Zhu, J., Yang, Y.H. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
6cyf | D | C | 0 | A | protein | null | type iii secretion system protein | IMMUNE SYSTEM | 04/05/18 | PcrV fragment with bound Fab | PSEUDOMONAS AERUGINOSA; HOMO SAPIENS | homo sapiens | homo sapiens | pseudomonas aeruginosa | Oganesyan, V. | 2.78 | X-RAY DIFFRACTION | 0.249 | 0.215 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
1mpa | H | L | 0 | P | peptide | null | pora p1.16 peptide fluorescein conjugate | COMPLEX (IMMUNOGLOBULIN/PEPTIDE) | 02/26/97 | BACTERICIDAL ANTIBODY AGAINST NEISSERIA MENINGITIDIS | MUS MUSCULUS | mus musculus | mus musculus | null | Van Den Elsen, J.M.H., Herron, J.N., Kroon, J., Gros, P. | 2.6 | X-RAY DIFFRACTION | 0.309 | 0.194 | false | true | IGHV1 | IGKV1 | Kappa | 0 | -10.96983 | Unknown | null | TBD |
6u9u | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 09/09/19 | Structure of GM9_TH8seq732127 FAB | HOMO SAPIENS | homo sapiens | homo sapiens | null | Singh, S., Liban, T.J., Pancera, M. | 2.26 | X-RAY DIFFRACTION | 0.250 | 0.208 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
4tnv | H | L | 0 | A | protein | null | avermectin-sensitive glutamate-gated chloride channel gluclalpha | Transport Protein/immune System | 06/05/14 | C. elegans glutamate-gated chloride channel (GluCl) in complex with Fab in a non-conducting conformation | CAENORHABDITIS ELEGANS; MUS MUSCULUS | mus musculus | mus musculus | caenorhabditis elegans | Althoff, T., Hibbs, R.E., Banerjee, S., Gouaux, E. | 3.6 | X-RAY DIFFRACTION | 0.283 | 0.261 | false | false | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
6cwt | A | B | 0 | E | protein | null | capsid protein | VIRAL PROTEIN/IMMUNE SYSTEM | 03/30/18 | Hepatitis B core-antigen in complex with Fab e21 | ORYCTOLAGUS CUNICULUS; HEPATITIS B VIRUS GENOTYPE D SUBTYPE ADW | oryctolagus cuniculus | oryctolagus cuniculus | hepatitis b virus genotype d subtype adw | Eren, E., Steven, A.C., Wingfield, P.T. | 3.151 | X-RAY DIFFRACTION | 0.283 | 0.231 | false | true | IGHV1 | IGKV1 | Kappa | 0 | -15.960251 | AUC | null | TBD |
6oc8 | A | null | 0 | null | null | null | null | IMMUNE SYSTEM | 03/22/19 | Crystal structure of a VHH against the capsid protein from BLV | LAMA GLAMA | lama glama | null | null | Carrion, F., Larrieux, N., Trajtenberg, F., Buschiazzo, A. | 2.109 | X-RAY DIFFRACTION | 0.241 | 0.205 | false | true | IGHV1 | null | null | null | null | null | null | null |
7rg7 | A | null | 0 | A | Hapten | MTX | METHOTREXATE | IMMUNE SYSTEM | 07/14/21 | Crystal structure of nanoclamp8:VHH in complex with MTX | NANOA | nanoa | null | nanoa | Guo, Z., Peat, T., Newman, J., Alexandrov, K. | 1.83 | X-RAY DIFFRACTION | 0.202 | 0.149 | false | true | IGHV1 | null | null | null | null | null | null | null |
7n9v | E | null | 0 | D | protein | null | capsid protein | VIRAL PROTEIN/IMMUNE SYSTEM | 06/18/21 | CA-targeting nanobody is a tool for studying HIV-1 capsid lattice interactions | Human immunodeficiency virus 1; Lama glama | lama glama | null | human immunodeficiency virus 1 | Tripler, T.N. | 3.45 | X-RAY DIFFRACTION | 0.258 | 0.212 | false | true | IGHV1 | null | null | null | null | null | null | null |
5nyx | O | P | 0 | null | null | null | null | IMMUNE SYSTEM | 05/12/17 | human Fab fragment 5H2 against NHBA from Neisseria meningitidis | HOMO SAPIENS | homo sapiens | homo sapiens | null | Enrico, M., Maritan, M. | 1.88 | X-RAY DIFFRACTION | 0.226 | 0.186 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
5vxj | H | null | 0 | G | protein | null | invasin ipad | IMMUNE SYSTEM | 05/23/17 | 2.50 A resolution structure of IpaD from Shigella flexneri in complex with single-domain antibody JMK-E3 | SHIGELLA FLEXNERI; VICUGNA PACOS | vicugna pacos | null | shigella flexneri | Barta, M.L., Lovell, S., Battaile, K.P., Picking, W.D., Picking, W.L. | 2.5 | X-RAY DIFFRACTION | 0.259 | 0.196 | false | true | IGHV1 | null | null | null | null | null | null | null |
5bk3 | H | L | 0 | L | carbohydrate | NAG | polysaccharide | IMMUNE SYSTEM | 09/12/17 | Crystal structure of the neutralizing anti-circumsporozoite protein 580 antibody | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Scally, S.W., Bosch, A., Triller, G., Wardemann, H., Julien, J.P. | 2.8 | X-RAY DIFFRACTION | 0.231 | 0.190 | false | true | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
7f7h | C | D | 0 | F | protein | null | spike glycoprotein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 06/29/21 | SARS-CoV-2 S protein RBD in complex with A8-1 Fab | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Dou, Y., Wang, X., Wang, K., Liu, P., Lu, B. | 3.19 | X-RAY DIFFRACTION | 0.275 | 0.205 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5e2u | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 10/01/15 | Structure of anti-TAU AT8 FAB in the presence of phosphopeptide | MUS MUSCULUS | mus musculus | mus musculus | null | Malia, T., Teplyakov, A. | 2.4 | X-RAY DIFFRACTION | 0.248 | 0.186 | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
6mef | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 09/06/18 | Broadly neutralizing antibodies against HCV use a CDRH3 disulfide motif to recognize an E2 glycoprotein site that can be targeted for vaccine design | HOMO SAPIENS | homo sapiens | homo sapiens | null | Flyak, A.I., Bjorkman, P.J. | 2.9 | X-RAY DIFFRACTION | 0.256 | 0.221 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7d5p | D | null | 0 | B | protein | null | drug transporter, putative | MEMBRANE PROTEIN | 09/27/20 | Structure of NorC transporter in an outward-open conformation in complex with a single-chain Indian camelid antibody | STAPHYLOCOCCUS AUREUS SUBSP. AUREUS COL; CAMELUS DROMEDARIUS | camelus dromedarius | null | staphylococcus aureus subsp. aureus col | Kumar, S., Athreya, A., Penmatsa, A. | 3.65 | X-RAY DIFFRACTION | 0.318 | 0.297 | false | true | IGHV1 | null | null | null | null | null | null | null |
6iap | E | D | 0 | A | protein | null | natural cytotoxicity triggering receptor 1 | IMMUNE SYSTEM | 11/27/18 | structure of human NKp46 in complex with antibody NKp46-1 and NKp46-4 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | synthetic construct | synthetic construct | homo sapiens | Roussel, A., Amigues, B. | 2.9 | X-RAY DIFFRACTION | 0.263 | 0.187 | false | true | IGHV1 | IGKV12 | Kappa | null | null | null | null | null |
3cm9 | A | L | 8 | null | null | null | null | IMMUNE SYSTEM | 03/21/08 | Solution Structure of Human SIgA2 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bonner, A., Almogren, A., Furtado, P.B., Kerr, M.A., Perkins, S.J. | NOT | SOLUTION SCATTERING | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
4gxv | I | M | 0 | null | null | null | null | IMMUNE SYSTEM | 09/04/12 | Crystal structure of anti-influenza virus antibody 1F1 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Ekiert, D.C., Wilson, I.A. | 1.449 | X-RAY DIFFRACTION | 0.207 | 0.181 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
7tyl | N | null | 0 | A | B | G | protein | protein | protein | NA | NA | NA | guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | MEMBRANE PROTEIN | 02/13/22 | Calcitonin Receptor in complex with Gs and rat amylin peptide, bypass motif | HOMO SAPIENS; LAMA GLAMA; SYNTHETIC CONSTRUCT | lama glama | null | homo sapiens | homo sapiens | homo sapiens | Cao, J., Belousoff, M.J., Johnson, R.M., Wootten, D.L., Sexton, P.M. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
3u4e | A | B | 0 | J | protein | null | v1v2 region of hiv-1 on 1fd6 scaffold | IMMUNE SYSTEM | 10/07/11 | Crystal Structure of PG9 Fab in Complex with V1V2 Region from HIV-1 strain CAP45 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Gorman, J., McLellan, J., Pancera, M., Kwong, P.D. | 2.185 | X-RAY DIFFRACTION | 0.234 | 0.182 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
4nik | B | b | 0 | A | protein | null | 26s proteasome non-atpase regulatory subunit 10 | Oncoprotein/Immune System | 11/06/13 | Structure of human Gankyrin in complex to the single chain antibody F5 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | null | null | homo sapiens | Sato, Y., Weiss, E., Rochel, N. | 2.5 | X-RAY DIFFRACTION | 0.208 | 0.164 | true | true | unknown | unknown | unknown | null | null | null | null | null |
3l5w | H | L | 0 | I | protein | null | interleukin-13 | IMMUNE SYSTEM | 12/22/09 | Crystal structure of the complex between IL-13 and C836 FAB | MUS MUSCULUS, HOMO SAPIENS; HOMO SAPIENS | mus musculus, homo sapiens | mus musculus, homo sapiens | homo sapiens | Teplyakov, A., Obmolova, G., Malia, T., Gilliland, G.L. | 2.0 | X-RAY DIFFRACTION | 0.253 | 0.205 | false | true | IGHV8 | IGKV16 | Kappa | 0 | -14 | SPR | 25 | 20226193 |
5mvj | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 01/16/17 | Structure of DC8E8 Fab at pH 6.5 crystallized in space-group P1 | MUS MUSCULUS | mus musculus | mus musculus | null | Skrabana, R., Novak, M., Cehlar, O., Kontsekova, E. | 2.5 | X-RAY DIFFRACTION | 0.272 | 0.219 | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
5ig7 | D | E | 0 | F | peptide | null | peptide pro-leu-gln-pro-gln-gln-pro-phe-pro | IMMUNE SYSTEM | 02/27/16 | Crystal structure of anti-gliadin 1002-1E01 Fab fragment in complex of peptide PLQPQQPFP | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Chen, X., Zhao, Y., Harlos, K., Snir, O., Sollid, L.M. | 1.97 | X-RAY DIFFRACTION | 0.236 | 0.190 | false | true | IGHV3 | IGLV4 | Lambda | null | null | null | null | null |
5myo | B | A | 0 | E | peptide | null | amyloid beta a4 protein | IMMUNE SYSTEM | 01/27/17 | Structure of Pyroglutamate-Abeta-specific Fab c#6 in complex with human Abeta-pE3-12-PEGb | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Parthier, C., Piechotta, A., Stubbs, M.T. | 1.59 | X-RAY DIFFRACTION | 0.215 | 0.178 | false | true | IGHV1 | IGKV1 | Kappa | 0 | -14.369764 | Unknown | null | TBD |
3j8v | H | L | 0 | E | protein | null | l1 | VIRUS/IMMUNE SYSTEM | 11/19/14 | Cryo-EM reconstruction of quasi-HPV16 complex with H16.14J Fab | HUMAN PAPILLOMAVIRUS TYPE 16; MUS MUSCULUS | mus musculus | mus musculus | human papillomavirus type 16 | Guan, J., Hafenstein, S. | 13.9 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV13 | Kappa | null | null | null | null | null |
6b5t | H | L | 0 | A | peptide | null | pfcsp peptide 29pro-asn-ala | IMMUNE SYSTEM | 09/29/17 | Structure of PfCSP peptide 29 with human antibody CIS42 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | plasmodium falciparum | Pancera, M., Weidle, C. | 2.222 | X-RAY DIFFRACTION | 0.209 | 0.183 | false | true | IGHV7 | IGLV2 | Lambda | 0 | -11.808362 | Unknown | null | TBD |
3cm9 | C | N | 8 | null | null | null | null | IMMUNE SYSTEM | 03/21/08 | Solution Structure of Human SIgA2 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bonner, A., Almogren, A., Furtado, P.B., Kerr, M.A., Perkins, S.J. | NOT | SOLUTION SCATTERING | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6orq | D | E | 0 | B | protein | null | rc1 variant of hiv-1 env glycoprotein gp120 | VIRAL PROTEIN/Immune System | 04/30/19 | Modified BG505 SOSIP-based immunogen RC1 in complex with the elicited V3-glycan patch antibody Ab275MUR | HUMAN IMMUNODEFICIENCY VIRUS 1; MUS MUSCULUS | mus musculus | mus musculus | human immunodeficiency virus 1 | Abernathy, M.E., Gristick, H.B., Bjorkman, P.J. | 4.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
4uv7 | H | L | 0 | A | protein | null | epidermal growth factor receptor | null | 08/05/14 | The complex structure of extracellular doamin of EGFR and GC1118A | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Yoo, J.H., Cho, H.S. | 2.1 | X-RAY DIFFRACTION | 0.24759 | 0.20199 | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
7lu9 | h | g | 0 | e | protein | null | unknown | VIRAL PROTEIN/IMMUNE SYSTEM | 02/21/21 | Cryo-EM structure of DH851.3 bound to HIV-1 CH505 Env | MACACA MULATTA; HUMAN IMMUNODEFICIENCY VIRUS 1 | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | Manne, K., Edwards, R.J., Acharya, P. | 5.6 | ELECTRON MICROSCOPY | null | null | false | false | IGHV2 | IGLV2 | Lambda | null | null | null | null | null |
6pzw | H | L | 0 | A | protein | null | neuraminidase | VIRAL PROTEIN/IMMUNE SYSTEM | 08/01/19 | CryoEM derived model of NA-22 Fab in complex with N9 Shanghai2 | INFLUENZA A VIRUS (A/ENVIRONMENT/SHANGHAI/S1439/2013(H7N9)); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus(a/environment/shanghai/s1439/2013(h7n9)) | Ward, A.B., Turner, H.L., Zhu, X. | 3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
6pis | H | L | 0 | B | protein | null | potassium channel subfamily k member 4 | ION TRANSPORT, MEMBRANE PROTEIN | 06/27/19 | Mouse two pore domain K+ channel TRAAK (K2P4.1) - Fab complex structure | MUS MUSCULUS; CRICETULUS MIGRATORIUS | cricetulus migratorius | cricetulus migratorius | mus musculus | Brohawn, S.G. | 2.77 | X-RAY DIFFRACTION | 0.286 | 0.248 | false | false | IGHV3 | IGKV22 | Kappa | null | null | null | null | null |
4v1d | D | E | 0 | C | protein | null | beta-mammal toxin cn2 | null | 09/25/14 | Ternary complex among two human derived single chain antibody fragments and Cn2 toxin from scorpion Centruroides noxius. | HOMO SAPIENS; CENTRUROIDES NOXIUS | homo sapiens | homo sapiens | centruroides noxius | RIANO-UMBARILA, L., SERRANO-POSADA, H., ROJAS-TREJO, S., RUDINO-PINERA, E., BECERRIL, B. | 3.1 | X-RAY DIFFRACTION | 0.2294 | 0.1848 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
2kqn | null | B | 12 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the AL-09 H87Y immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
3qyc | B | null | 0 | null | null | null | null | IMMUNE SYSTEM | 03/03/11 | Structure of a dimeric anti-HER2 single domain antibody | null | homo sapiens | null | null | Baral, T.N., Chao, S., Li, S., Tanha, J., Arbabai, M., Wang, S., Zhang, J. | 1.6 | X-RAY DIFFRACTION | 0.229 | 0.209 | false | true | IGHV3 | null | null | null | null | null | null | null |
4ydv | B | A | 0 | Q | peptide | null | hiv gp41 peptide gp41(596-606) | IMMUNE SYSTEM | 02/23/15 | STRUCTURE OF THE ANTIBODY 7B2 THAT CAPTURES HIV-1 VIRIONS | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Nicely, N.I., Pemble IV, C.W. | 2.7 | X-RAY DIFFRACTION | 0.223 | 0.189 | false | true | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
5whz | null | L | 0 | null | null | null | null | IMMUNE SYSTEM | 07/18/17 | PGDM1400-10E8v4 CODV Fab | HOMO SAPIENS | null | homo sapiens | null | Lord, D.M., Wei, R.R. | 3.549 | X-RAY DIFFRACTION | 0.287 | 0.239 | false | true | null | IGLV3 | Lambda | null | null | null | null | null |
7kmd | H | L | 0 | G | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 11/02/20 | Crystal structure of a HIV-1 clade C isolate Du172.17 HR1.R4.664 Env trimer in complex with human Fabs PGT124 and 35O22 | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Kumar, S., Wilson, I.A. | 3.39229 | X-RAY DIFFRACTION | 0.292 | 0.242 | false | true | IGHV4 | unknown | unknown | null | null | null | null | null |
6k42 | H | h | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 05/23/19 | cryo-EM structure of alpha2BAR-Gi1 complex | BOS TAURUS; MUS MUSCULUS; HOMO SAPIENS; ENTEROBACTERIA PHAGE RB59 | mus musculus | null | bos taurus | mus musculus | Daopeng, Y., Zhongmin, L., Hongwei, W., Brian, K. | 4.1 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
7p78 | W | null | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 07/19/21 | SARS-CoV-2 spike protein in complex with sybody#15 and sybody#68 in a 1up/1up-out/1down conformation | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; SYNTHETIC CONSTRUCT | synthetic construct | null | severe acute respiratory syndrome coronavirus2 | Walter, J.D., Hutter, C.A.J., Garaeva, A.A., Scherer, M., Zimmermann, I., Wyss, M., Rheinberger, J., Ruedin, Y., Earp, J.C., Egloff, P., Sorgenfrei, M., Huerlimann, L.M., Gonda, I., Meier, G., Remm, S., Thavarasah, S., Zimmer, G., Slotboom, D.J., Paulino, C., Plattet, P., Seeger, M.A. | 3.32 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
6ssi | G | null | 0 | B | protein | null | cys-loop ligand-gated ion channel | TRANSPORT PROTEIN | 09/07/19 | Structure of the pentameric ligand-gated ion channel ELIC in complex with a PAM nanobody | DICKEYA CHRYSANTHEMI; LAMA GLAMA | lama glama | null | dickeya chrysanthemi | Ulens, C., Brams, M., Evans, G.L., Spurny, R., Govaerts, C., Pardon, E., Steyaert, J. | 2.59 | X-RAY DIFFRACTION | 0.246 | 0.230 | false | true | IGHV1 | null | null | null | null | null | null | null |
4i9w | G | F | 0 | B | protein | null | potassium channel subfamily k member 4 | METAL TRANSPORT | 12/05/12 | Human two pore domain K+ channel TRAAK (K2P4.1) - Fab complex structure | MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | homo sapiens | Brohawn, S.G., Mackinnon, R. | 2.75 | X-RAY DIFFRACTION | 0.236 | 0.201 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
7k37 | L | K | 0 | E | F | protein | protein | NA | NA | hemagglutinin | hemagglutinin | VIRAL PROTEIN | 09/10/20 | Structure of full-length influenza HA with a head-binding antibody at pH 7.8 | INFLUENZA A VIRUS (STRAIN A/HONG KONG/1/1968 H3N2); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus (strain a/hong kong/1/1968h3n2) | influenza a virus (strain a/hong kong/1/1968h3n2) | Gui, M., Xiang, Y., Gao, J. | 2.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
6ikm | G | g | 0 | null | null | null | null | ANTIMICROBIAL PROTEIN | 10/16/18 | Crystal structure of SpuE-Spermidine in complex with ScFv5 | PSEUDOMONAS AERUGINOSA; HOMO SAPIENS | pseudomonas aeruginosa | homo sapiens | null | Wu, D., Sun, X. | 3.398 | X-RAY DIFFRACTION | 0.268 | 0.228 | true | true | unknown | unknown | unknown | null | null | null | null | null |
5gzn | H | L | 0 | A | E | protein | protein | NA | NA | genome polyprotein | genome polyprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 09/29/16 | Structure of neutralizing antibody bound to Zika envelope protein | ZIKA VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | zika virus | zika virus | Wang, Q., Yang, H., Liu, X., Dai, L., Ma, T., Qi, J., Wong, G., Peng, R., Liu, S., Li, J., Li, S., Song, J., Liu, J., He, J., Yuan, H., Xiong, Y., Liao, Y., Li, J., Yang, J., Tong, Z., Griffin, B., Bi, Y., Liang, M., Xu, X., Cheng, G., Wang, P., Qiu, X., Kobinger, G., Shi, Y., Yan, J., Gao, G.F. | 3.0 | X-RAY DIFFRACTION | 0.258 | 0.223 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
3j30 | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 01/28/13 | Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab CHK152 | MUS MUSCULUS | mus musculus | mus musculus | null | Sun, S., Xiang, Y., Rossmann, M.G. | 16 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6qkd | null | L | 0 | null | null | null | null | IMMUNE SYSTEM | 01/29/19 | CRYSTAL STRUCTURE OF vhh-based FAB-fragment of antibody BCD-085 | LAMA GLAMA | null | lama glama | null | Kostareva, O.S., Kolyadenko, I.A., Ulitin, A.B., Ekimova, V.M., Evdokimov, S.R., Garber, M.B., Tishchenko, T.V., Gabdulkhakov, A.G. | 1.9 | X-RAY DIFFRACTION | 0.228 | 0.169 | false | true | null | IGKV3 | Kappa | null | null | null | null | null |
6vlw | H | L | 0 | G | protein | null | 426cod | IMMUNE SYSTEM/VIRAL PROTEIN | 01/27/20 | Crystal Structure of 426cOD in Complex with VRC01 Fab | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Weidle, C., Pancera, M. | 3.42 | X-RAY DIFFRACTION | 0.261 | 0.210 | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null |
7e8c | S | U | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 03/01/21 | SARS-CoV-2 S-6P in complex with 9 Fabs | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Du, S., Xiao, J., Zhang, Z. | 3.16 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
6vup | A | a | 0 | null | null | null | null | PROTEIN BINDING | 02/16/20 | Reverse Transcriptase Diabody with R83T/E85C Mutations | HOMO SAPIENS | homo sapiens | null | null | Chesterman, C., Arnold, E. | 1.4 | X-RAY DIFFRACTION | 0.171 | 0.131 | true | true | unknown | unknown | unknown | null | null | null | null | null |
5vl2 | F | null | 0 | F | Hapten | 9EG | N-(4-chlorophenyl)-N'-(3,4-dichlorophenyl)urea | UNKNOWN FUNCTION | 04/24/17 | The hapten triclocarban bound to the single domain camelid nanobody VHH T4 | LAMA GLAMA | lama glama | null | lama glama | Tabares-da Rosa, S., Gonzalez-Sapienza, G., Wilson, D.K. | 1.9 | X-RAY DIFFRACTION | 0.263 | 0.219 | false | true | IGHV1 | null | null | null | null | null | null | null |
6q1e | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/03/19 | Inferred precursor (UCA) of the human antibody lineage 652 | HOMO SAPIENS | homo sapiens | homo sapiens | null | McCarthy, K.R., Harrison, S.C. | 2.5 | X-RAY DIFFRACTION | 0.257 | 0.223 | false | true | IGHV4 | IGLV3 | Lambda | null | null | null | null | null |
5u8r | H | L | 0 | A | protein | null | insulin-like growth factor 1 receptor | TRANSFERASE/IMMUNE SYSTEM | 12/14/16 | Structure of the ectodomain of the human Type 1 insulin-like growth factor receptor | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Lawrence, M., Xu, Y. | 3.00002 | X-RAY DIFFRACTION | 0.285 | 0.256 | false | true | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
7lpn | I | null | 0 | F | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN | 02/12/21 | Cryo-EM structure of llama J3 VHH antibody in complex with HIV-1 Env BG505 DS-SOSIP.664 | HUMAN IMMUNODEFICIENCY VIRUS 1; LAMA GLAMA | lama glama | null | human immunodeficiency virus 1 | Gorman, J., Kwong, P.D. | 3.61 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
6sv2 | H | L | 0 | A | protein | null | major prion protein | PROTEIN BINDING | 09/17/19 | Human prion protein (PrP) fragment 119-231 (G127V M129 variant) complexed to ICSM 18 (anti-Prp therapeutic antibody) Fab fragment | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Conners, R. | 2.3 | X-RAY DIFFRACTION | 0.251 | 0.200 | false | false | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
6mu6 | H | L | 0 | G | protein | null | envelope glycoprotein gp160 | IMMUNE SYSTEM/INHIBITOR | 10/22/18 | Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to Small Molecule HIV-1 Entry Inhibitor BMS-814508 in Complex with Human Antibodies 3H109L and 35O22 at 3.2 Angstrom | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Lai, Y.-T., Kwong, P.D. | 2.551 | X-RAY DIFFRACTION | 0.264 | 0.231 | false | true | IGHV4 | unknown | unknown | null | null | null | null | null |
4qci | B | A | 0 | D | protein | null | platelet-derived growth factor subunit b | CYTOKINE/CYTOKINE RECEPTOR | 05/12/14 | PDGF-B blocking antibody bound to PDGF-BB | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Kuai, J., Mosyak, L., Tam, M., LaVallie, E., Pullen, N., Carven, G. | 2.3 | X-RAY DIFFRACTION | 0.247 | 0.211 | false | true | IGHV3 | IGLV3 | Lambda | 0 | -14.396652 | SPR | null | TBD |
2qtj | B | M | 7 | null | null | null | null | IMMUNE SYSTEM | 08/02/07 | Solution structure of human dimeric immunoglobulin A | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bonner, A., Furtado, P.B., Almogren, A., Kerr, M.A., Perkins, S.J. | NOT | SOLUTION SCATTERING | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7kd6 | I | J | 0 | K | protein | null | insulin receptor subunit alpha | SIGNALING PROTEIN | 10/08/20 | Insulin Receptor L1-CR plus alphaCT fragment in co-complex with Fv 83-7 and single-chain insulin SCI-b | HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Lawrence, M.C., Menting, J.G. | 2.6 | X-RAY DIFFRACTION | 0.221 | 0.189 | false | true | IGHV2 | IGKV8 | Kappa | null | null | null | null | null |
4dtg | H | L | 0 | K | protein | null | tissue factor pathway inhibitor | BLOOD CLOTTING INHIBITOR/IMMUNE SYSTEM | 02/21/12 | Hemostatic effect of a monoclonal antibody mAb 2021 blocking the interaction between FXa and TFPI in a rabbit hemophilia model | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Svensson, L.A., Breinholt, J., Krogh, B.O., Hilden, I. | 1.8 | X-RAY DIFFRACTION | 0.236 | 0.196 | false | true | IGHV3 | IGKV2 | Kappa | 0 | -13.828902 | SPR | null | TBD |
6pdx | H | L | 0 | A | protein | null | hemagglutinin | IMMUNE SYSTEM | 06/19/19 | Crystal structure of C585 Fab in complex with influenza virus hemagglutinin from A/Switzerland/9715293/2013 (H3N2) | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | Qiu, Y., Zhou, Y. | 3.993 | X-RAY DIFFRACTION | 0.242 | 0.212 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
1kip | B | A | 0 | C | protein | null | lysozyme | COMPLEX (IMMUNOGLOBULIN/HYDROLASE) | 10/23/96 | FV MUTANT Y(B 32)A (VH DOMAIN) OF MOUSE MONOCLONAL ANTIBODY D1.3 COMPLEXED WITH HEN EGG WHITE LYSOZYME | MUS MUSCULUS; GALLUS GALLUS | mus musculus | mus musculus | gallus gallus | Fields, B.A., Poljak, R.J., Mariuzza, R.A. | 2.1 | X-RAY DIFFRACTION | unknown | 0.162 | false | true | IGHV2 | IGKV12 | Kappa | null | null | null | null | null |
7q4q | D | C | 0 | F | peptide | null | lrg1 epitope | IMMUNE SYSTEM | 11/01/21 | Magacizumab Fab fragment in complex with human LRG1 epitope | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Gutierrez-Fernandez, J., Luecke, H. | 1.65 | X-RAY DIFFRACTION | 0.207 | 0.183 | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6dkj | A | B | 0 | D | protein | null | gastric inhibitory polypeptide receptor | SIGNALING PROTEIN | 05/29/18 | human GIPR ECD and Fab complex | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Min, X., Wang, Z. | 1.95 | X-RAY DIFFRACTION | 0.238 | 0.199 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
4np4 | H | L | 0 | A | protein | null | toxin b | IMMUNE SYSTEM | 11/20/13 | Clostridium difficile toxin B CROP domain in complex with FAB domains of neutralizing antibody bezlotoxumab | CLOSTRIDIUM DIFFICILE; HOMO SAPIENS | homo sapiens | homo sapiens | clostridium difficile | Orth, P., Xiao, L., Hernandez, L.D., Reichert, P., Sheth, P., Beaumont, M., Murgolo, N., Ermakov, G., DiNunzio, E., Racine, F., Karczewski, J., Secore, S., Ingram, R.N., Mayhood, T., Strickland, C., Therien, A.G. | 2.89 | X-RAY DIFFRACTION | 0.232 | 0.198 | false | false | IGHV5 | IGKV3 | Kappa | 0 | -14.626397 | SPR | null | TBD |
7lse | H | L | 0 | E | protein | null | envelope protein e | IMMUNE SYSTEM/VIRAL PROTEIN | 02/18/21 | Crystal structure of the human neutralizing antibody Fab fragment T025 bound to TBEV EDIII (Far Eastern Subtype) | HOMO SAPIENS; TICK-BORNE ENCEPHALITIS VIRUS FAR EASTERN SUBTYPE | homo sapiens | homo sapiens | tick-borne encephalitis virus far easternsubtype | Keeffe, J.R., Bjorkman, P.J. | 2.35 | X-RAY DIFFRACTION | 0.211 | 0.173 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
6z7z | D | C | 0 | F | E | peptide | peptide | NA | NA | insulin | insulin | HORMONE | 06/02/20 | Porcine insulin in complex with the analytical antibody OXI-005 Fab | MUS MUSCULUS; SUS SCROFA | mus musculus | mus musculus | sus scrofa | sus scrofa | Johansson, E. | 2.4 | X-RAY DIFFRACTION | 0.259 | 0.210 | false | true | IGHV5 | IGKV19 | Kappa | null | null | null | null | null |
3q6f | J | I | 0 | null | null | null | null | IMMUNE SYSTEM | 12/31/10 | Crystal structure of Fab of human mAb 2909 specific for quaternary neutralizing epitope of HIV-1 gp120 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Spurrier, B., Sampson, J., Totrov, M., Li, H., O'Neal, T., William, C., Robinson, J., Gorny, M.K., Zolla-Pazner, S., Kong, X.P. | 3.192 | X-RAY DIFFRACTION | 0.243 | 0.199 | false | false | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
2zck | H | L | 0 | P | protein | null | prostate-specific antigen | IMMUNE SYSTEM | 11/09/07 | Crystal structure of a ternary complex between PSA, a substrat-acyl intermediate and an activating antibody | HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Menez, R., Stura, E., Jolivet-Reynaud, C. | 3.1 | X-RAY DIFFRACTION | 0.275 | 0.221 | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6mu7 | D | E | 0 | B | protein | null | envelope glycoprotein gp160 | IMMUNE SYSTEM/INHIBITOR | 10/22/18 | Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to Small Molecule HIV-1 Entry Inhibitor BMS-818251 in Complex with Human Antibodies 3H109L and 35O22 at 3.1 Angstrom | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Lai, Y.-T., Kwong, P.D. | 2.501 | X-RAY DIFFRACTION | 0.261 | 0.223 | false | true | unknown | unknown | unknown | null | null | null | null | null |
3v7a | F | G | 0 | B | protein | null | capsid | IMMUNE SYSTEM | 12/20/11 | Structural basis for broad detection of genogroup II noroviruses by a monoclonal antibody that binds to a site occluded in the viral particle | HUMAN CALICIVIRUS; MUS MUSCULUS | mus musculus | mus musculus | human calicivirus | Hansman, G.S., Mclellan, J.S., Kwong, P.D. | 3.297 | X-RAY DIFFRACTION | 0.283 | 0.227 | false | false | IGHV1 | IGKV12 | Kappa | null | null | null | null | null |
3ogo | H | null | 0 | B | protein | null | green fluorescent protein | FLUORESCENT PROTEIN/IMMUNE SYSTEM | 08/17/10 | Structure of the GFP:GFP-nanobody complex at 2.8 A resolution in spacegroup P21212 | AEQUOREA VICTORIA; CAMELUS DROMEDARIUS | camelus dromedarius | null | aequorea victoria | Kubala, M.H., Kovtun, O., Alexandrov, K., Collins, B.M. | 2.8 | X-RAY DIFFRACTION | 0.253 | 0.202 | false | true | IGHV1 | null | null | 0 | -12.56 | Other | 37 | 20945358 |
6cmi | D | C | 0 | B | protein | null | glycoprotein g | VIRAL PROTEIN/IMMUNE SYSTEM | 03/05/18 | Crystal Structure of the Hendra Virus Attachment G Glycoprotein Bound to a Potent Cross-Reactive Neutralizing Human Monoclonal Antibody m102.3 | HENDRA VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | hendra virus | Xu, K., Nikolov, D. | 2.72 | X-RAY DIFFRACTION | 0.246 | 0.196 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7jhh | N | null | 0 | null | null | null | null | TRANSFERASE/IMMUNE SYSTEM | 07/20/20 | Cryo-EM structure of ATP-bound fully inactive AMPK in complex with Fab and nanobody | HOMO SAPIENS; ESCHERICHIA COLI K-12; SYNTHETIC CONSTRUCT | synthetic construct | null | null | Yan, Y., Murkherjee, S., Zhou, X.E., Xu, T.H., Xu, H.E., Kossiakoff, A.A., Melcher, K. | 3.92 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7d5q | C | null | 0 | A | protein | null | drug transporter, putative | MEMBRANE PROTEIN | 09/27/20 | Structure of NorC transporter (K398A mutant) in an outward-open conformation in complex with a single-chain Indian camelid antibody | STAPHYLOCOCCUS AUREUS SUBSP. AUREUS COL; CAMELUS DROMEDARIUS | camelus dromedarius | null | staphylococcus aureus subsp. aureus col | Kumar, S., Athreya, A., Penmatsa, A. | 3.6 | X-RAY DIFFRACTION | 0.315 | 0.308 | false | true | IGHV1 | null | null | null | null | null | null | null |
6nij | H | L | 0 | E | A | C | protein | protein | protein | NA | NA | NA | amc011 glycoprotein 120 | amc011 glycoprotein 120 | amc011 glycoprotein 120 | IMMUNE SYSTEM | 12/29/18 | PGT145 Fab in complex with full length AMC011 HIV-1 Env | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | homo sapiens | homo sapiens | Cottrell, C.A., Torrents de la Pena, A., Rantalainen, K., Torres, J.L., Ward, A.B. | 5.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV2 | Kappa | null | null | null | null | null |
4nry | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 11/27/13 | Crystal Structure of HIV-1 Neutralizing Antibody m66 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Ofek, G., Yang, Y., Kwong, P.D. | 3.14 | X-RAY DIFFRACTION | 0.256 | 0.228 | false | true | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
7ben | D | F | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 12/24/20 | Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in a ternary complex with COVOX-253 and COVOX-75 Fabs | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Zhao, Y., Ren, J., Stuart, D. | 2.5 | X-RAY DIFFRACTION | 0.282 | 0.240 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7v5n | F | E | 0 | G | nucleic-acid | null | dna (5'-d(*gp*cp*gp*gp*tp*tp*gp*gp*tp*gp*gp*tp*ap*gp*tp*tp*ap*cp*gp*tp*tp*cp* gp*c)-3') | IMMUNE SYSTEM/DNA | 08/17/21 | Crystal structure of Fab fragment of bevacizumab bound to DNA aptamer | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | synthetic construct | Hishiki, A., Tong, J., Todoroki, K., Hashimoto, H. | 1.7 | X-RAY DIFFRACTION | 0.210 | 0.178 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6mwn | H | L | 0 | A | nucleic-acid | null | hav dv rna (92-mer) | RNA/Immune System | 10/29/18 | Crystal structure of hepatitis A virus IRES domain V in complex with Fab HAVx | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | hepatovirus a | Koirala, D., Shao, Y., Piccirilli, J.A. | 2.838 | X-RAY DIFFRACTION | 0.252 | 0.186 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5n7w | A | B | 0 | Y | protein | null | interleukin-17a | IMMUNE SYSTEM | 02/21/17 | Computationally designed functional antibody | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Hargreaves, D., Breed, J. | 1.96 | X-RAY DIFFRACTION | 0.250 | 0.199 | false | true | IGHV1 | IGKV1 | Kappa | 0 | -9.681918 | SPR | null | TBD |
5a16 | E | F | 0 | null | null | null | null | null | 04/28/15 | Crystal structure of Fab4201 raised against Human Erythrocyte Anion Exchanger 1 | MUS MUSCULUS | mus musculus | mus musculus | null | Arakawa, T., Kobayashi-Yugiri, T., Alguel, Y., Weyand, S., Iwanari, H., Hatae, H., Iwata, M., Abe, Y., Hino, T., Ikeda-Suno, C., Kuma, H., Kang, D., Murata, T., Hamakubo, T., Cameron, A., Kobayashi, T., Hamasaki, N., Iwata, S. | 2.5 | X-RAY DIFFRACTION | 0.2552 | 0.2128 | false | false | IGHV8 | IGKV3 | Kappa | null | null | null | null | null |
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